Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0015964

Physical Location & Seq

Genomic Coordinates Reverse (-)

27544995 .. 27555635

Gene Structure 10641 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0196700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

ATGAGTGAATTCGTGGACCTAGAATCCCAGGACGGCGTTCGGATGCCGTGGAACGTAATCCCCGGCACAAAGCAGGAGTCCACCAACAGCGTCGTCCCCGTCTCCGCCGTCTACACTCCGATCAAGCCTTTCCCCAACATGCCAGTCCTACCTTACTCCCCTCTCCGCTGCCGCGTCTGCCGCTCCGTCCTCAACCCCTTCTCCACCGTCGATTACGCCGCCAAGATCTGGATCTGCCCCTTCTGCTTCAACCGCAACCACTTCCCTCCCCACTACGCCTCCATTTCCGACGAGAACCTCCCCGCCGAGCTCTTCCCCCAATACACCACCATCGAATACGACTCGTCGCTCGAGAAGCCGACCACGCCGCCCGTCTTCATCTTCGTCGTCGACACCTGCATGATCGAGGAGGAGCTCTCGTTTCTCAAGTCGGCTCTGTCCCAGGCGCTGGGCTTGTTGCCCGATCACTCCCTCGTAGGGCTCATCACCTTCGGGAGCTTCGTCCACGTCCACGAATTGGGATTCTCCACCATTCCCAAGACCTACGTGTTCAAAGGATCCAAGGAAGTCAGCAAGGATCAGCTGCTTGAGCAGATGAGTTTCTTTCTCAAAAAGCCGAAGCCGGCCACCGGAGTCATTGCCGGCCCCAGGGACGGGTTGTCCTCCGAGAGCATTGCCAGGTTTCTATTGCCGGCATCTGAGTGCGAATTTGCGCTCAATTCAGTGTTGGAGGAGTTGCAGAGAGATCCTTGGCAGGTTCCGGCGGATCAGCGAGCCACCAGGTGCACCAGCACCGCGCTTAATGTTGCAGCGAGCTTGTTGGGAGCTTGTGTGCCTGGTTCAGGAGCCAGAATTATGGCATTCATGGGTGGACCATCAACCGAAGGCCAGGGTGCTATTGTGTCAAAAAGCCTATCTGAACCAATTCGTTCTCATAAGGACCTGGATAAAGATTCAGCCCTTTATTTTCATAAAGCCGTGAAGTTCTACGAGGGACTTTCAAAGCAGCTTGTACATCAAGGACATGTACTTGATCTTTTTGCTTGCGCACTTGACCAGGTGGGGATTGCTGAACTTAAAATTGCAGTTGAAAGAACTGGAGGATTGGTTGTGCTTGCAGAGAGTTTTGGGCATTCAGTGTTTAAAGACTCACTTATACGTGTTTTCCAGTCGGGTGATCATGAGCTTGGTTTATCATCAAATGGCATATTTGAGATAAACTGCTCAAAGGACGTTAAGGTTCAGGGCATAATTGGTCCTTGTGCATCCCTTGAAAAGAAAGGTCCTTTAGTCTCCGATACAGTCGTTGGCCAGGGTAGTACAAGTGCGTGGAAGATGTGTGGGCTTGACAAAGCTACATCTTTATGTCTAATATTTGAAATTGTTAAGAAGGAAATCCCAGATGCTACTGTTCAACCAACTAGCAATCAATTCTACTTCCAGTTTCTAACATATTATCAGCATAATAGTGGTCAGATGAGACTTCGTGTTACAACCCTTTCAAGAAGATGGATTGCTGGAACTGGAAGCATACAGGACTTGATTGCCGGATTTGATCAAGAAGCCGCTGCTGTAGTCATGGCACGCCTAGTTTCTTTCAAAATGGAAACTGAGGCAGAATTTGATCCTATAAGATGGTTGGATAAATCATTGATACATATGTGTTCTCGGTTTGGAGATTACCAGAAGGACAGCCCGTCTTCTTTCAGCTTATCTCCGCGGTTTTCAATTTTCCCTCAATTTATGTTTCATTTACGGCGTTCTCAATTTGTTCAGGTTTTCAACAACAGCCCAGACGAAACAGCATACTTCAGAATGATTTTGAACAGGGAAAATGTTACCAATTCAGTTGTGATGATTCAGCCTTCATTGATTTCATACTCATTTCATTCGGGCCCTGAACCTGCACTTCTTGATGTTGCTGCCATTGCTGCTGACAGGATTCTTCTTTTAGACGCTTACTTTACTGTTGTCATTTTTCATGGTTCAACTATTGCTCAGTGGCGAAAAGCAGGATATCAGGATTTGCCTGAACATCAGGCATTTGCTCAGTTGTTACAAGCTCCTCGTGATGATTCAGATACAATAATCAAGGAGAGATTTCCAGTACCTCGCCTTGTGGTTTGTGATCAGCATGGTTCACAGGCCCGTTTTCTCTTGGCAAAGTTGAATCCTTCAGCTACTTACAACAATGAAGGTCCACTTCCGGGTGGGGATGTTATCTTTACAGACGATGTTAGTTTTGAAGTCTTCTTGGACCATCTCCAGAGATTAGCAGTTCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GATA

Protein Analysis

761

Amino Acids

84.35

Weight (kDa)

5.79

Isoelectric Point (pI)

44.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-Sec23_Sec24	PF04810	54 - 92	4.4e-16	Sec23/Sec24 zinc finger
Sec23_trunk	PF04811	122 - 389	7.4e-66	Sec23/Sec24 trunk domain
Sec23_BS	PF08033	400 - 504	4e-23	Sec23/Sec24 beta-sandwich domain
Sec23_helical	PF04815	519 - 617	7.9e-26	Sec23/Sec24 helical domain
Gelsolin	PF00626	632 - 719	2.7e-14	Gelsolin repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015964)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45050 AT3G60530
fragaria_vesca	FvH4_7g10740
malus_domestica	MD07G1112200.v1.1
prunus_persica	Prupe.2G135400_v2.0.a1
pyrus_communis	pycom07g09710
rosa_chinensis	RchiOBHm_Chr1g0348681
rosa_laevigata	RLG00000028630
rosa_roxburghii	Rroxscaffold_4G00306760
rosa_rugosa	Rorug01G0196700
rosa_samantha	Rh1AG214100 Rh1BG180600 Rh1CG198700 Rh1DG210600
rosa_wichuraiana	Rw1G018130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	404
Acc16I	TGCGCA	1 cut(s)	1048
Acc36I	ACCTGC	3 cut(s)	404, 745, 1912
AccB7I	CCANNNNNTGG	3 cut(s)	228, 448, 517
AccBSI	CCGCTC	1 cut(s)	183
AccI	GTMKAC	2 cut(s)	111, 390
AccII	CGCG	3 cut(s)	174, 797, 1720
AclWI	GGATC	7 cut(s)	239, 552, 565, 585, 740, 774, 1619
AcoI	YGGCCR	2 cut(s)	624, 1309
AcsI	RAATTY	3 cut(s)	8, 707, 1619
AcuI	CTGAAG	2 cut(s)	1795, 2160
AdeI	CACNNNGTG	1 cut(s)	783
AfaI	GTAC	4 cut(s)	1014, 1029, 1321, 2109
AflIII	ACRYGT	3 cut(s)	546, 1024, 1159
AhdI	GACNNNNNGTC	2 cut(s)	658, 1696
AjiI	CACGTC	1 cut(s)	508
Alw21I	GWGCWC	3 cut(s)	312, 417, 788
Alw26I	GTCTC	3 cut(s)	106, 1297, 1474
Alw44I	GTGCAC	1 cut(s)	784
AlwI	GGATC	7 cut(s)	239, 552, 565, 585, 740, 774, 1619
AlwNI	CAGNNNCTG	1 cut(s)	448
Ama87I	CYCGRG	1 cut(s)	350
AoxI	GGCC	6 cut(s)	624, 643, 886, 1309, 1894, 2145
ApaI	GGGCCC	1 cut(s)	1898
ApaLI	GTGCAC	1 cut(s)	784
ApeKI	GCWGC	7 cut(s)	168, 583, 809, 1006, 1568, 1922, 1931
ApoI	RAATTY	3 cut(s)	8, 707, 1619
ArsI	GACNNNNNNTTYG	2 cut(s)	62, 94
Asp700I	GAANNNNTTC	1 cut(s)	924
AspLEI	GCGC	4 cut(s)	448, 715, 799, 1049
AsuC2I	CCSGG	2 cut(s)	63, 2208
AsuHPI	GGTGA	2 cut(s)	478, 1187
AvaI	CYCGRG	1 cut(s)	350
AvaII	GGWCC	7 cut(s)	16, 872, 940, 1256, 1283, 2198, 2257
BaeGI	GKGCMC	2 cut(s)	788, 1898
BaeI	ACNNNNGTAYC	4 cut(s)	1290, 1323, 1646, 1679
BalI	TGGCCA	1 cut(s)	1311
BamHI	GGATCC	1 cut(s)	557
BanII	GRGCYC	4 cut(s)	312, 417, 483, 1898
BauI	CACGAG	1 cut(s)	2067
BbsI	GAAGAC	3 cut(s)	367, 1692, 2242
Bbv12I	GWGCWC	3 cut(s)	312, 417, 788
BbvI	GCAGC	7 cut(s)	155, 570, 821, 1018, 1555, 1909, 1918
BccI	CCATC	5 cut(s)	338, 883, 1503, 1629, 2268
BceAI	ACGGC	5 cut(s)	31, 49, 92, 962, 1772
BcgI	CGANNNNNNTGC	2 cut(s)	656, 690
BclI	TGATCA	3 cut(s)	1177, 1555, 2128
BcnI	CCSGG	2 cut(s)	63, 2208
BcoDI	GTCTC	3 cut(s)	106, 1297, 1474
BfaI	CTAG	3 cut(s)	20, 1422, 1589
BfmI	CTRYAG	1 cut(s)	1572
BfoI	RGCGCY	1 cut(s)	449
BfuAI	ACCTGC	3 cut(s)	404, 745, 1912
BglII	AGATCT	1 cut(s)	225
Bme18I	GGWCC	7 cut(s)	16, 872, 940, 1256, 1283, 2198, 2257
BmeRI	GACNNNNNGTC	2 cut(s)	658, 1696
BmeT110I	CYCGRG	1 cut(s)	350
BmgBI	CACGTC	1 cut(s)	508
BmiI	GGNNCC	5 cut(s)	559, 646, 759, 847, 1896
BmsI	GCATC	4 cut(s)	33, 704, 1274, 1393
BpiI	GAAGAC	3 cut(s)	367, 1692, 2242
BplI	GAGNNNNNCTC	2 cut(s)	401, 433
BpmI	CTGGAG	2 cut(s)	1119, 2249
BpuEI	CTTGAG	2 cut(s)	410, 608
BpuMI	CCSGG	2 cut(s)	63, 2208
BsaAI	YACGTR	2 cut(s)	547, 1160
BsaBI	GATNNNNATC	1 cut(s)	230
BsaWI	WCCGGW	1 cut(s)	629
Bse118I	RCCGGY	3 cut(s)	622, 641, 691
Bse1I	ACTGG	6 cut(s)	143, 1102, 1168, 1441, 1528, 2105
Bse3DI	GCAATG	3 cut(s)	636, 672, 1926
Bse8I	GATNNNNATC	1 cut(s)	230
BseGI	GGATG	3 cut(s)	48, 1265, 2221
BseJI	GATNNNNATC	1 cut(s)	230
BseMI	GCAATG	3 cut(s)	636, 672, 1926
BseMII	CTCAG	4 cut(s)	690, 1602, 2012, 2063
BseNI	ACTGG	6 cut(s)	143, 1102, 1168, 1441, 1528, 2105
BseRI	GAGGAG	4 cut(s)	422, 425, 746, 2055
BseSI	GKGCMC	2 cut(s)	788, 1898
BseXI	GCAGC	7 cut(s)	155, 570, 821, 1018, 1555, 1909, 1918
BseYI	CCCAGC	1 cut(s)	448
BsgI	GTGCAG	1 cut(s)	1890
Bsh1236I	CGCG	3 cut(s)	174, 797, 1720
BshFI	GGCC	6 cut(s)	626, 645, 888, 1311, 1896, 2147
BsiHKAI	GWGCWC	3 cut(s)	312, 417, 788
BsiHKCI	CYCGRG	1 cut(s)	350
BsiSI	CCGG	8 cut(s)	63, 623, 630, 642, 692, 761, 1548, 2207
BslFI	GGGAC	4 cut(s)	80, 424, 665, 1008
BsmAI	GTCTC	3 cut(s)	106, 1297, 1474
BsmBI	CGTCTC	1 cut(s)	106
BsmFI	GGGAC	4 cut(s)	80, 424, 665, 1008
BsmI	GAATGC	2 cut(s)	860, 1132
BsnI	GGCC	6 cut(s)	626, 645, 888, 1311, 1896, 2147
BsoBI	CYCGRG	1 cut(s)	350
Bsp120I	GGGCCC	1 cut(s)	1894
Bsp1286I	GDGCHC	5 cut(s)	312, 417, 483, 788, 1898
Bsp1407I	TGTACA	1 cut(s)	1012
BspANI	GGCC	6 cut(s)	626, 645, 888, 1311, 1896, 2147
BspCNI	CTCAG	4 cut(s)	691, 1603, 2011, 2062
BspFNI	CGCG	3 cut(s)	174, 797, 1720
BspHI	TCATGA	1 cut(s)	1180
BspLI	GGNNCC	5 cut(s)	559, 646, 759, 847, 1896
BspMI	ACCTGC	3 cut(s)	404, 745, 1912
BspPI	GGATC	7 cut(s)	239, 552, 565, 585, 740, 774, 1619
BspQI	GCTCTTC	1 cut(s)	317
BsrBI	CCGCTC	1 cut(s)	183
BsrDI	GCAATG	3 cut(s)	636, 672, 1926
BsrFI	RCCGGY	3 cut(s)	622, 641, 691
BsrGI	TGTACA	1 cut(s)	1012
BsrI	ACTGG	6 cut(s)	143, 1102, 1168, 1441, 1528, 2105
BssAI	RCCGGY	3 cut(s)	622, 641, 691
BssSI	CACGAG	1 cut(s)	2067
BssT1I	CCWWGG	2 cut(s)	561, 749
Bst2BI	CACGAG	1 cut(s)	2067
Bst4CI	ACNGT	4 cut(s)	208, 1303, 1411, 1969
Bst6I	CTCTTC	1 cut(s)	317
BstAUI	TGTACA	1 cut(s)	1012
BstBAI	YACGTR	2 cut(s)	547, 1160
BstC8I	GCNNGC	8 cut(s)	624, 643, 693, 774, 814, 1045, 1116, 1585
BstDEI	CTNAG	4 cut(s)	699, 1611, 1998, 2049
BstDSI	CCRYGG	2 cut(s)	47, 1718
BstENI	CCTNNNNNAGG	1 cut(s)	840
BstF5I	GGATG	3 cut(s)	48, 1265, 2221
BstFNI	CGCG	3 cut(s)	174, 797, 1720
BstH2I	RGCGCY	1 cut(s)	449
BstHHI	GCGC	4 cut(s)	448, 715, 799, 1049
BstMAI	GTCTC	3 cut(s)	106, 1297, 1474
BstMWI	GCNNNNNNNGC	9 cut(s)	177, 180, 243, 252, 355, 364, 589, 1928, 1931
BstNSI	RCATGY	2 cut(s)	142, 1028
BstSFI	CTRYAG	1 cut(s)	1572
BstSLI	GKGCMC	2 cut(s)	788, 1898
BstUI	CGCG	3 cut(s)	174, 797, 1720
BstV1I	GCAGC	7 cut(s)	155, 570, 821, 1018, 1555, 1909, 1918
BstV2I	GAAGAC	3 cut(s)	367, 1692, 2242
BstX2I	RGATCY	4 cut(s)	225, 231, 557, 745
BstXI	CCANNNNNNTGG	1 cut(s)	856
BstYI	RGATCY	4 cut(s)	225, 231, 557, 745
BsuRI	GGCC	6 cut(s)	626, 645, 888, 1311, 1896, 2147
BtgI	CCRYGG	2 cut(s)	47, 1718
BtrI	CACGTC	1 cut(s)	508
BtsCI	GGATG	3 cut(s)	48, 1265, 2221
BtsIMutI	CAGTG	3 cut(s)	729, 1143, 2006
BveI	ACCTGC	3 cut(s)	404, 745, 1912
Cac8I	GCNNGC	8 cut(s)	624, 643, 693, 774, 814, 1045, 1116, 1585
CaiI	CAGNNNCTG	1 cut(s)	448
CciI	TCATGA	1 cut(s)	1180
CfoI	GCGC	4 cut(s)	448, 715, 799, 1049
Cfr10I	RCCGGY	3 cut(s)	622, 641, 691
Cfr42I	CCGCGG	1 cut(s)	1721
CseI	GACGC	3 cut(s)	79, 163, 1964
CsiI	ACCWGGT	2 cut(s)	779, 1056
Csp6I	GTAC	4 cut(s)	1013, 1028, 1320, 2108
CviAII	CATG	8 cut(s)	139, 400, 865, 1025, 1181, 1579, 1982, 2135
CviQI	GTAC	4 cut(s)	1013, 1028, 1320, 2108
DdeI	CTNAG	4 cut(s)	699, 1611, 1998, 2049
DraI	TTTAAA	1 cut(s)	1144
DraIII	CACNNNGTG	1 cut(s)	783
DriI	GACNNNNNGTC	2 cut(s)	658, 1696
EaeI	YGGCCR	2 cut(s)	624, 1309
Eam1104I	CTCTTC	1 cut(s)	317
Eam1105I	GACNNNNNGTC	2 cut(s)	658, 1696
EarI	CTCTTC	1 cut(s)	317
EciI	GGCGGA	2 cut(s)	94, 779
Ecl136II	GAGCTC	2 cut(s)	310, 415
Eco130I	CCWWGG	2 cut(s)	561, 749
Eco24I	GRGCYC	4 cut(s)	312, 417, 483, 1898
Eco32I	GATATC	1 cut(s)	2018
Eco47I	GGWCC	7 cut(s)	16, 872, 940, 1256, 1283, 2198, 2257
Eco53kI	GAGCTC	2 cut(s)	310, 415
Eco57I	CTGAAG	2 cut(s)	1795, 2160
Eco88I	CYCGRG	1 cut(s)	350
EcoICRI	GAGCTC	2 cut(s)	310, 415
EcoNI	CCTNNNNNAGG	1 cut(s)	840
EcoO109I	RGGNCCY	3 cut(s)	940, 1283, 1895
EcoRI	GAATTC	1 cut(s)	8
EcoRV	GATATC	1 cut(s)	2018
EcoT14I	CCWWGG	2 cut(s)	561, 749
EcoT38I	GRGCYC	4 cut(s)	312, 417, 483, 1898
ErhI	CCWWGG	2 cut(s)	561, 749
Esp3I	CGTCTC	1 cut(s)	106
FaeI	CATG	8 cut(s)	142, 403, 868, 1028, 1184, 1582, 1985, 2138
FalI	AAGNNNNNCTT	4 cut(s)	1137, 1169, 2187, 2219
FaqI	GGGAC	4 cut(s)	80, 424, 665, 1008
FatI	CATG	8 cut(s)	138, 399, 864, 1024, 1180, 1578, 1981, 2134
FauI	CCCGC	1 cut(s)	310
FauNDI	CATATG	1 cut(s)	1659
FbaI	TGATCA	3 cut(s)	1177, 1555, 2128
FblI	GTMKAC	2 cut(s)	111, 390
FokI	GGATG	3 cut(s)	55, 1252, 2228
FriOI	GRGCYC	4 cut(s)	312, 417, 483, 1898
FspBI	CTAG	3 cut(s)	20, 1422, 1589
FspI	TGCGCA	1 cut(s)	1048
GlaI	GCGC	4 cut(s)	447, 714, 798, 1048
GsaI	CCCAGC	1 cut(s)	452
GsuI	CTGGAG	2 cut(s)	1119, 2249
HaeII	RGCGCY	1 cut(s)	449
HaeIII	GGCC	6 cut(s)	626, 645, 888, 1311, 1896, 2147
HapII	CCGG	8 cut(s)	63, 623, 630, 642, 692, 761, 1548, 2207
HgaI	GACGC	3 cut(s)	79, 163, 1964
HhaI	GCGC	4 cut(s)	448, 715, 799, 1049
Hin1II	CATG	8 cut(s)	142, 403, 868, 1028, 1184, 1582, 1985, 2138
Hin6I	GCGC	4 cut(s)	446, 713, 797, 1047
HinP1I	GCGC	4 cut(s)	446, 713, 797, 1047
HincII	GTYRAC	1 cut(s)	391
HindII	GTYRAC	1 cut(s)	391
HpaII	CCGG	8 cut(s)	63, 623, 630, 642, 692, 761, 1548, 2207
HphI	GGTGA	2 cut(s)	478, 1187
Hpy99I	CGWCG	6 cut(s)	95, 212, 293, 349, 389, 392
HpyAV	CCTTC	9 cut(s)	208, 250, 499, 878, 1384, 1681, 1875, 2184, 2189
HpyCH4III	ACNGT	4 cut(s)	208, 1303, 1411, 1969
HpyCH4IV	ACGT	5 cut(s)	54, 507, 546, 1159, 1233
HpyCH4V	TGCA	8 cut(s)	399, 739, 786, 809, 1085, 1118, 1265, 1907
HpyF10VI	GCNNNNNNNGC	9 cut(s)	177, 180, 243, 252, 355, 364, 589, 1928, 1931
HpyF3I	CTNAG	4 cut(s)	699, 1611, 1998, 2049
HpySE526I	ACGT	5 cut(s)	54, 507, 546, 1159, 1233
Hsp92II	CATG	8 cut(s)	142, 403, 868, 1028, 1184, 1582, 1985, 2138
HspAI	GCGC	4 cut(s)	446, 713, 797, 1047
KroI	GCCGGC	3 cut(s)	622, 641, 691
KroNI	GCCGGC	3 cut(s)	624, 643, 693
Ksp22I	TGATCA	3 cut(s)	1177, 1555, 2128
KspI	CCGCGG	1 cut(s)	1721
LguI	GCTCTTC	1 cut(s)	317
LmnI	GCTCC	6 cut(s)	188, 412, 495, 824, 845, 2068
Lsp1109I	GCAGC	7 cut(s)	155, 570, 821, 1018, 1555, 1909, 1918
LweI	GCATC	4 cut(s)	33, 704, 1274, 1393
MabI	ACCWGGT	2 cut(s)	779, 1056
MaeI	CTAG	3 cut(s)	20, 1422, 1589
MaeII	ACGT	5 cut(s)	54, 507, 546, 1159, 1233
MaeIII	GTNAC	3 cut(s)	1489, 1837, 2055
MbiI	CCGCTC	1 cut(s)	183
MboII	GAAGA	8 cut(s)	304, 367, 373, 1345, 1518, 1692, 1937, 2242
MflI	RGATCY	4 cut(s)	225, 231, 557, 745
MhlI	GDGCHC	5 cut(s)	312, 417, 483, 788, 1898
MlsI	TGGCCA	1 cut(s)	1311
MluNI	TGGCCA	1 cut(s)	1311
MlyI	GAGTC	4 cut(s)	86, 335, 642, 1142
MmeI	TCCRAC	3 cut(s)	312, 708, 1620
Mox20I	TGGCCA	1 cut(s)	1311
MroNI	GCCGGC	3 cut(s)	622, 641, 691
MroXI	GAANNNNTTC	1 cut(s)	924
MscI	TGGCCA	1 cut(s)	1311
MseI	TTAA	5 cut(s)	801, 1077, 1143, 1236, 1386
MslI	CAYNNNNRTG	4 cut(s)	398, 700, 1363, 1467
Msp20I	TGGCCA	1 cut(s)	1311
MspA1I	CMGCKG	4 cut(s)	168, 583, 1568, 1720
MspI	CCGG	8 cut(s)	63, 623, 630, 642, 692, 761, 1548, 2207
Mva1269I	GAATGC	2 cut(s)	860, 1132
MvnI	CGCG	3 cut(s)	174, 797, 1720
MwoI	GCNNNNNNNGC	9 cut(s)	177, 180, 243, 252, 355, 364, 589, 1928, 1931
NaeI	GCCGGC	3 cut(s)	624, 643, 693
NciI	CCSGG	2 cut(s)	63, 2208
NdeI	CATATG	1 cut(s)	1659
NgoMIV	GCCGGC	3 cut(s)	622, 641, 691
NlaIII	CATG	8 cut(s)	142, 403, 868, 1028, 1184, 1582, 1985, 2138
NlaIV	GGNNCC	5 cut(s)	559, 646, 759, 847, 1896
NmeAIII	GCCGAG	1 cut(s)	331
NsbI	TGCGCA	1 cut(s)	1048
NspI	RCATGY	2 cut(s)	142, 1028
PaeR7I	CTCGAG	1 cut(s)	350
PagI	TCATGA	1 cut(s)	1180
PaqCI	CACCTGC	1 cut(s)	404
PasI	CCCWGGG	1 cut(s)	648
PciI	ACATGT	1 cut(s)	1024
PciSI	GCTCTTC	1 cut(s)	317
PcsI	WCGNNNNNNNCGW	1 cut(s)	498
PctI	GAATGC	2 cut(s)	860, 1132
PdiI	GCCGGC	3 cut(s)	624, 643, 693
PdmI	GAANNNNTTC	1 cut(s)	924
PfeI	GAWTC	7 cut(s)	23, 522, 953, 1858, 1942, 2075, 2170
PflMI	CCANNNNNTGG	3 cut(s)	228, 448, 517
PleI	GAGTC	4 cut(s)	85, 335, 641, 1142
PpsI	GAGTC	4 cut(s)	85, 335, 641, 1142
Ppu21I	YACGTR	2 cut(s)	547, 1160
PpuMI	RGGWCCY	2 cut(s)	940, 1283
PscI	ACATGT	1 cut(s)	1024
Psp124BI	GAGCTC	2 cut(s)	312, 417
Psp5II	RGGWCCY	2 cut(s)	940, 1283
PspFI	CCCAGC	1 cut(s)	448
PspN4I	GGNNCC	5 cut(s)	559, 646, 759, 847, 1896
PspOMI	GGGCCC	1 cut(s)	1894
PspPPI	RGGWCCY	2 cut(s)	940, 1283
PstNI	CAGNNNCTG	1 cut(s)	448
PsuI	RGATCY	4 cut(s)	225, 231, 557, 745
PvuII	CAGCTG	1 cut(s)	583
RsaI	GTAC	4 cut(s)	1014, 1029, 1321, 2109
RsaNI	GTAC	4 cut(s)	1013, 1028, 1320, 2108
RseI	CAYNNNNRTG	4 cut(s)	398, 700, 1363, 1467
SacI	GAGCTC	2 cut(s)	312, 417
SacII	CCGCGG	1 cut(s)	1721
SalI	GTCGAC	1 cut(s)	389
SapI	GCTCTTC	1 cut(s)	317
SaqAI	TTAA	5 cut(s)	801, 1077, 1143, 1236, 1386
SchI	GAGTC	4 cut(s)	86, 335, 642, 1142
SduI	GDGCHC	5 cut(s)	312, 417, 483, 788, 1898
SexAI	ACCWGGT	2 cut(s)	779, 1056
SfaNI	GCATC	4 cut(s)	33, 704, 1274, 1393
SfcI	CTRYAG	1 cut(s)	1572
Sfr274I	CTCGAG	1 cut(s)	350
Sfr303I	CCGCGG	1 cut(s)	1721
SgrBI	CCGCGG	1 cut(s)	1721
SinI	GGWCC	7 cut(s)	16, 872, 940, 1256, 1283, 2198, 2257
SlaI	CTCGAG	1 cut(s)	350
SmiMI	CAYNNNNRTG	4 cut(s)	398, 700, 1363, 1467
SmlI	CTYRAG	3 cut(s)	350, 425, 587
SmoI	CTYRAG	3 cut(s)	350, 425, 587
SspI	AATATT	1 cut(s)	1374
SspMI	CTAG	3 cut(s)	20, 1422, 1589
SstI	GAGCTC	2 cut(s)	312, 417
StyI	CCWWGG	2 cut(s)	561, 749
TaaI	ACNGT	4 cut(s)	208, 1303, 1411, 1969
TaiI	ACGT	5 cut(s)	57, 510, 549, 1162, 1236
TaqI	TCGA	5 cut(s)	210, 333, 351, 390, 405
TatI	WGTACW	3 cut(s)	1012, 1027, 1319
TauI	GCSGC	5 cut(s)	174, 183, 221, 370, 1568
TfiI	GAWTC	7 cut(s)	23, 522, 953, 1858, 1942, 2075, 2170
Tru1I	TTAA	5 cut(s)	801, 1077, 1143, 1236, 1386
Tru9I	TTAA	5 cut(s)	801, 1077, 1143, 1236, 1386
TscAI	CASTG	3 cut(s)	729, 1143, 2006
TseI	GCWGC	7 cut(s)	168, 583, 809, 1006, 1568, 1922, 1931
TspDTI	ATGAA	9 cut(s)	367, 853, 959, 1739, 1857, 1866, 1877, 1970, 2208
TspGWI	ACGGA	1 cut(s)	175
TspRI	CASTG	3 cut(s)	729, 1143, 2006
Van91I	CCANNNNNTGG	3 cut(s)	228, 448, 517
VneI	GTGCAC	1 cut(s)	784
VpaK11BI	GGWCC	7 cut(s)	16, 872, 940, 1256, 1283, 2198, 2257
XagI	CCTNNNNNAGG	1 cut(s)	840
XapI	RAATTY	3 cut(s)	8, 707, 1619
XceI	RCATGY	2 cut(s)	142, 1028
XhoI	CTCGAG	1 cut(s)	350
XmiI	GTMKAC	2 cut(s)	111, 390
XmnI	GAANNNNTTC	1 cut(s)	924
XspI	CTAG	3 cut(s)	20, 1422, 1589

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.