Rorug01G0274100

DNA metabolic process

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0012649
Physical Location & Seq
Reverse (-)
38668943 .. 38670871
1929 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0274100.1

Sequence Viewer

Length: 1929 bp
ATGGCTCTGCATAATTTAAAGTCAAAATCTGCTTTGAGGGAAAAATATGGTGTGAAGGAAGAATGGGTGATGCCGTTTGAGGTTATCCCAATCATCAAGGAAGGAACACTGACCGTGGGAGAATTCGTAGGAAGGAAAGTGCAGGAGGCGAAACCCTTAATAAAAAGGAACCTGATAGAGGTGGGAGAAGGAATTATATATTATGAACCTGAGGAGCAAGTCGTGTCTCGGTCGGGTGATGAATGTGTTGTGGCACTTACAGATCAGTGGTACATCACATATGGGGAAACTGAATGGAAAAAGATGGCTGAAGAGTGCTTGTCCGGCATGAGCTTATATTCCGATGAGACTCGGCATGGATTTGAGCACACTATAGGGTGGTTGAATCAGTGGGCTTGTTCACGATCTTTTGGACTTGGGACTCGTATCCCCTGGGATGAAGAATTCTTAGTTGAGTCACTGTCTGATTCAACTATTTACATGGCTTATTACACCATTGCTCATTTCTTACACAATGGAGATATGTATGATGCCAGCAGGTCAGAAGTTAAACCTGAGCAAATGACTGACGACGTCTGGGATTTTATTTTCTGTGATGGCCCATATCCCAAGTCATCCGATATCTCATCATCAATTCTTAGGAAAATGCAGAAGGAGTTTGAATATTGGTATCCTTTTGATCTACGAGTTTCAGGCAAGGATTTGATCCAAAACCATCTAGCCTTCTGCATATACAACCACACGGCTATTATGACGTCCAACAAGTACTGGCCTCGTGGGTTCAGATGTAATGGGCACCTCTTGCTAAATGGTGAGAAGATGTCCAAGTCTACAGGGAACTTTAGGACCCTTCGCCAGGCAATTGAGGAATTTTCTGCTGATGCCACTCGGTTCTCTTTGGCTGATGCTGGAGATGGTGTGGAAAATGCAAATTTTGTATTTGAGACTGCCAATGCTGCAATCTTGCGGCTCACTAAAGAGATTGCATGGATTGAACAAGTTTTGGCTTCAGACTCTTGTTTGAGAACAGGTCCCCCATCTACTTATGCTGACAGGGTCTTTGCTAATGAGATAAACATTGCTGTACACAGGACTGAGCTGAATTACCGAGATTACATGTTCCGAGAAGCCCTCAAGACTGGGTTTTATGACCTTCAAGCAGCCAGGGATGAGTACAAGTTTTCGTGCGGTGCTGGGGGCATGAACCGTGATTTGGTATGGCGTTTTGTGGATGTGCAGACGCGTCTTATTACTCCAATCTGCCCACACTATGCAGAATATGTGTGGAGGGAACTTTTGAACAAGGAAGGGTTTGTGGTAAATGCAGGATGGCCTGTTGCTGATGCTTCAGACTTAACCCTCCAGAGTGCCAATAAGTATTTGCAAGACTTCATTGTTTTAATGAGGAAGCTTTTTCACAAGCAAGTTTCAGGTTCAAATAAAGGCCATAAGGGTATTCCAGTTACATTGGTCACTGGAGAGAACAAACTAACTGGCTTGGTATATGTTAATGAGCATTTTGATGGGTGGAAGGCAGAGTGCTTGAAAATACTTCAAATTCACTTTAACAGTGACACTCGTACATTTTCTTCTGACAAGCTGATACAGGAGGCGCTACAGGAAAGTTCTATTGGTCACTCTAGAGATTTTCGAGAAACCCTGAAGTTGTGTATGCCTTTCATAAGGTCAAAGAAGGATGAAGCAATTGCAATTGGGGCTCGTGCCTTGGACTTAACGTTGCCATTTGGAGAGATTGAGGTCCTTCATGAGAACTTGGACTTGATCAAGAGGCAAATCGGTCTTCAAGAGTTGCATGTTTTGTCCTTTGCCAACCCTGATGCTCGCGCTTTAGCTGGTCCTCATGTCAAGCGGATAGATCGGAATCCTCCATTTCCTGGGAGCCCCACTGCCATCTTCTTGACTTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

642

Amino Acids

73.36

Weight (kDa)

5.72

Isoelectric Point (pI)

49.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA-synt_1 PF00133 83 - 309 8.5e-13 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1g PF09334 217 - 317 1.5e-08 tRNA synthetases class I (M)
tRNA-synt_1e PF01406 224 - 301 2.9e-07 tRNA synthetases class I (C) catalytic domain
Anticodon_1 PF08264 351 - 471 2.9e-13 Anticodon-binding domain of tRNA ligase
RBD_LARS1 PF24810 504 - 580 3.1e-06 Leucine--tRNA ligase, RagD-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 576, 758
Acc36I ACCTGC 1 cut(s) 528
AccB1I GGYRCC 1 cut(s) 795
AccB7I CCANNNNNTGG 1 cut(s) 1895
AccI GTMKAC 1 cut(s) 830
AccII CGCG 2 cut(s) 1243, 1845
AciI CCGC 3 cut(s) 967, 1188, 1870
AclI AACGTT 1 cut(s) 1736
AclWI GGATC 1 cut(s) 700
AcsI RAATTY 5 cut(s) 122, 443, 869, 931, 1557
AcuI CTGAAG 4 cut(s) 330, 993, 1332, 1682
AcyI GRCGYC 2 cut(s) 573, 755
AfaI GTAC 5 cut(s) 272, 767, 1086, 1175, 1582
AfiI CCNNNNNNNGG 4 cut(s) 178, 856, 1213, 1895
AflIII ACRYGT 2 cut(s) 1116, 1241
AjnI CCWGG 4 cut(s) 431, 855, 1163, 1894
AjuI GAANNNNNNNTTGG 4 cut(s) 1196, 1228, 1614, 1646
AluBI AGCT 5 cut(s) 333, 1099, 1411, 1600, 1853
AluI AGCT 5 cut(s) 333, 1099, 1411, 1600, 1853
Alw21I GWGCWC 1 cut(s) 369
Alw26I GTCTC 3 cut(s) 231, 341, 938
AlwI GGATC 1 cut(s) 700
AoxI GGCC 4 cut(s) 598, 770, 1331, 1444
ApeKI GCWGC 2 cut(s) 956, 1160
ApoI RAATTY 5 cut(s) 122, 443, 869, 931, 1557
ArsI GACNNNNNNTTYG 2 cut(s) 1043, 1075
AspLEI GCGC 2 cut(s) 1615, 1847
AspS9I GGNCC 5 cut(s) 599, 846, 1031, 1759, 1856
AsuHPI GGTGA 3 cut(s) 79, 248, 824
AvaII GGWCC 4 cut(s) 846, 1031, 1759, 1856
AxyI CCTNAGG 1 cut(s) 210
BaeGI GKGCMC 1 cut(s) 798
BanI GGYRCC 1 cut(s) 795
BanII GRGCYC 2 cut(s) 1720, 1904
BarI GAAGNNNNNNTAC 2 cut(s) 1573, 1605
BauI CACGAG 2 cut(s) 774, 1719
BbsI GAAGAC 1 cut(s) 1793
Bbv12I GWGCWC 1 cut(s) 369
BbvI GCAGC 2 cut(s) 943, 1172
BccI CCATC 8 cut(s) 298, 590, 723, 908, 1045, 1323, 1517, 1919
BceAI ACGGC 2 cut(s) 58, 759
BciT130I CCWGG 4 cut(s) 433, 857, 1165, 1896
BciVI GTATCC 2 cut(s) 437, 681
BclI TGATCA 1 cut(s) 1782
BcoDI GTCTC 3 cut(s) 231, 341, 938
BfaI CTAG 2 cut(s) 719, 1641
BfmI CTRYAG 3 cut(s) 372, 831, 1616
BfoI RGCGCY 1 cut(s) 1616
BfuAI ACCTGC 1 cut(s) 528
BfuI GTATCC 2 cut(s) 437, 681
BisI GCNGC 3 cut(s) 957, 968, 1161
BlsI GCNGC 3 cut(s) 958, 969, 1162
BmcAI AGTACT 1 cut(s) 767
Bme1390I CCNGG 4 cut(s) 433, 857, 1165, 1896
Bme18I GGWCC 4 cut(s) 846, 1031, 1759, 1856
BmgT120I GGNCC 5 cut(s) 599, 846, 1031, 1759, 1856
BmiI GGNNCC 5 cut(s) 170, 797, 848, 1033, 1901
BmrFI CCNGG 4 cut(s) 433, 857, 1165, 1896
BmrI ACTGGG 1 cut(s) 1149
BmsI GCATC 6 cut(s) 60, 520, 871, 895, 1333, 1828
BmuI ACTGGG 1 cut(s) 1149
BpiI GAAGAC 1 cut(s) 1793
BplI GAGNNNNNCTC 2 cut(s) 1116, 1148
BpmI CTGGAG 3 cut(s) 930, 1346, 1497
Bpu10I CCTNAGC 1 cut(s) 555
BpuEI CTTGAG 1 cut(s) 1118
BsaBI GATNNNNATC 1 cut(s) 1881
BsaHI GRCGYC 2 cut(s) 573, 755
BsaJI CCNNGG 6 cut(s) 114, 431, 432, 1164, 1725, 1895
BsaXI ACNNNNNCTCC 4 cut(s) 111, 141, 903, 933
Bsc4I CCNNNNNNNGG 4 cut(s) 178, 856, 1213, 1895
Bse1I ACTGG 5 cut(s) 773, 1144, 1460, 1480, 1498
Bse21I CCTNAGG 1 cut(s) 210
Bse3DI GCAATG 2 cut(s) 495, 1077
Bse8I GATNNNNATC 1 cut(s) 1881
BseBI CCWGG 4 cut(s) 433, 857, 1165, 1896
BseDI CCNNGG 6 cut(s) 114, 431, 432, 1164, 1725, 1895
BseGI GGATG 6 cut(s) 442, 614, 1174, 1237, 1334, 1702
BseJI GATNNNNATC 1 cut(s) 1881
BseLI CCNNNNNNNGG 4 cut(s) 178, 856, 1213, 1895
BseMI GCAATG 2 cut(s) 495, 1077
BseMII CTCAG 3 cut(s) 201, 546, 1086
BseNI ACTGG 5 cut(s) 773, 1144, 1460, 1480, 1498
BseRI GAGGAG 1 cut(s) 227
BseSI GKGCMC 1 cut(s) 798
BseXI GCAGC 2 cut(s) 943, 1172
BseYI CCCAGC 1 cut(s) 1193
BsgI GTGCAG 2 cut(s) 161, 1256
Bsh1236I CGCG 2 cut(s) 1243, 1845
Bsh1285I CGRYCG 1 cut(s) 233
BshFI GGCC 4 cut(s) 600, 772, 1333, 1446
BshNI GGYRCC 1 cut(s) 795
BsiEI CGRYCG 1 cut(s) 233
BsiHKAI GWGCWC 1 cut(s) 369
BsiSI CCGG 1 cut(s) 324
BslFI GGGAC 2 cut(s) 433, 1017
BslI CCNNNNNNNGG 4 cut(s) 178, 856, 1213, 1895
BsmAI GTCTC 3 cut(s) 231, 341, 938
BsmFI GGGAC 2 cut(s) 433, 1017
BsnI GGCC 4 cut(s) 600, 772, 1333, 1446
Bsp1286I GDGCHC 4 cut(s) 369, 798, 1720, 1904
Bsp1407I TGTACA 1 cut(s) 1084
Bsp143I GATC 6 cut(s) 262, 404, 679, 705, 1782, 1876
BspACI CCGC 3 cut(s) 967, 1188, 1870
BspANI GGCC 4 cut(s) 600, 772, 1333, 1446
BspCNI CTCAG 3 cut(s) 202, 547, 1087
BspFNI CGCG 2 cut(s) 1243, 1845
BspHI TCATGA 1 cut(s) 1765
BspLI GGNNCC 5 cut(s) 170, 797, 848, 1033, 1901
BspMI ACCTGC 1 cut(s) 528
BspPI GGATC 1 cut(s) 700
BspT107I GGYRCC 1 cut(s) 795
BsrDI GCAATG 2 cut(s) 495, 1077
BsrGI TGTACA 1 cut(s) 1084
BsrI ACTGG 5 cut(s) 773, 1144, 1460, 1480, 1498
BssECI CCNNGG 6 cut(s) 114, 431, 432, 1164, 1725, 1895
BssMI GATC 6 cut(s) 262, 404, 679, 705, 1782, 1876
BssNI GRCGYC 2 cut(s) 573, 755
BssSI CACGAG 2 cut(s) 774, 1719
BssT1I CCWWGG 1 cut(s) 1725
Bst2BI CACGAG 2 cut(s) 774, 1719
Bst2UI CCWGG 4 cut(s) 433, 857, 1165, 1896
Bst4CI ACNGT 4 cut(s) 115, 462, 1208, 1571
Bst6I CTCTTC 1 cut(s) 306
BstACI GRCGYC 2 cut(s) 573, 755
BstAPI GCANNNNNTGC 1 cut(s) 802
BstAUI TGTACA 1 cut(s) 1084
BstC8I GCNNGC 2 cut(s) 535, 1843
BstDEI CTNAG 5 cut(s) 210, 448, 555, 638, 1095
BstDSI CCRYGG 1 cut(s) 114
BstENI CCTNNNNNAGG 2 cut(s) 176, 854
BstF5I GGATG 6 cut(s) 442, 614, 1174, 1237, 1334, 1702
BstFNI CGCG 2 cut(s) 1243, 1845
BstH2I RGCGCY 1 cut(s) 1616
BstHHI GCGC 2 cut(s) 1615, 1847
BstKTI GATC 6 cut(s) 265, 407, 682, 708, 1785, 1879
BstMAI GTCTC 3 cut(s) 231, 341, 938
BstMBI GATC 6 cut(s) 262, 404, 679, 705, 1782, 1876
BstMCI CGRYCG 1 cut(s) 233
BstMWI GCNNNNNNNGC 4 cut(s) 324, 802, 956, 1715
BstNI CCWGG 4 cut(s) 433, 857, 1165, 1896
BstNSI RCATGY 2 cut(s) 1120, 1817
BstSCI CCNGG 4 cut(s) 431, 855, 1163, 1894
BstSFI CTRYAG 3 cut(s) 372, 831, 1616
BstSLI GKGCMC 1 cut(s) 798
BstUI CGCG 2 cut(s) 1243, 1845
BstV1I GCAGC 2 cut(s) 943, 1172
BstV2I GAAGAC 1 cut(s) 1793
Bsu36I CCTNAGG 1 cut(s) 210
BsuI GTATCC 2 cut(s) 437, 681
BsuRI GGCC 4 cut(s) 600, 772, 1333, 1446
BtgI CCRYGG 1 cut(s) 114
BtsCI GGATG 6 cut(s) 442, 614, 1174, 1237, 1334, 1702
BtsI GCAGTG 1 cut(s) 1905
BtsIMutI CAGTG 7 cut(s) 107, 272, 395, 458, 1473, 1576, 1905
BveI ACCTGC 1 cut(s) 528
Cac8I GCNNGC 2 cut(s) 535, 1843
CciI TCATGA 1 cut(s) 1765
CfoI GCGC 2 cut(s) 1615, 1847
Cfr13I GGNCC 5 cut(s) 599, 846, 1031, 1759, 1856
CseI GACGC 2 cut(s) 1232, 1249
Csp6I GTAC 5 cut(s) 271, 766, 1085, 1174, 1581
CviAII CATG 9 cut(s) 328, 356, 481, 987, 1117, 1201, 1766, 1814, 1862
CviQI GTAC 5 cut(s) 271, 766, 1085, 1174, 1581
DdeI CTNAG 5 cut(s) 210, 448, 555, 638, 1095
DpnI GATC 6 cut(s) 264, 406, 681, 707, 1784, 1878
DpnII GATC 6 cut(s) 262, 404, 679, 705, 1782, 1876
DraI TTTAAA 1 cut(s) 18
Eam1104I CTCTTC 1 cut(s) 306
EarI CTCTTC 1 cut(s) 306
Eco130I CCWWGG 1 cut(s) 1725
Eco24I GRGCYC 2 cut(s) 1720, 1904
Eco32I GATATC 1 cut(s) 622
Eco47I GGWCC 4 cut(s) 846, 1031, 1759, 1856
Eco57I CTGAAG 4 cut(s) 330, 993, 1332, 1682
Eco81I CCTNAGG 1 cut(s) 210
EcoNI CCTNNNNNAGG 2 cut(s) 176, 854
EcoO109I RGGNCCY 3 cut(s) 846, 1031, 1759
EcoRI GAATTC 2 cut(s) 122, 443
EcoRII CCWGG 4 cut(s) 431, 855, 1163, 1894
EcoRV GATATC 1 cut(s) 622
EcoT14I CCWWGG 1 cut(s) 1725
EcoT38I GRGCYC 2 cut(s) 1720, 1904
ErhI CCWWGG 1 cut(s) 1725
FaeI CATG 9 cut(s) 331, 359, 484, 990, 1120, 1204, 1769, 1817, 1865
FaqI GGGAC 2 cut(s) 433, 1017
FatI CATG 9 cut(s) 327, 355, 480, 986, 1116, 1200, 1765, 1813, 1861
FauNDI CATATG 1 cut(s) 280
FbaI TGATCA 1 cut(s) 1782
FblI GTMKAC 1 cut(s) 830
Fnu4HI GCNGC 3 cut(s) 957, 968, 1161
FokI GGATG 6 cut(s) 449, 601, 1181, 1244, 1341, 1709
FriOI GRGCYC 2 cut(s) 1720, 1904
Fsp4HI GCNGC 3 cut(s) 957, 968, 1161
FspBI CTAG 2 cut(s) 719, 1641
GlaI GCGC 2 cut(s) 1614, 1846
GluI GCNGC 3 cut(s) 957, 968, 1161
GsaI CCCAGC 1 cut(s) 1197
GsuI CTGGAG 3 cut(s) 930, 1346, 1497
HaeII RGCGCY 1 cut(s) 1616
HaeIII GGCC 4 cut(s) 600, 772, 1333, 1446
HapII CCGG 1 cut(s) 324
HgaI GACGC 2 cut(s) 1232, 1249
HhaI GCGC 2 cut(s) 1615, 1847
Hin1I GRCGYC 2 cut(s) 573, 755
Hin1II CATG 9 cut(s) 331, 359, 484, 990, 1120, 1204, 1769, 1817, 1865
Hin6I GCGC 2 cut(s) 1613, 1845
HinP1I GCGC 2 cut(s) 1613, 1845
HindIII AAGCTT 1 cut(s) 1409
HinfI GANTC 7 cut(s) 349, 385, 421, 455, 467, 1013, 1882
HpaII CCGG 1 cut(s) 324
HphI GGTGA 3 cut(s) 79, 248, 824
Hpy166II GTNNAC 3 cut(s) 401, 831, 1087
Hpy188III TCNNGA 9 cut(s) 402, 1135, 1363, 1641, 1652, 1766, 1786, 1805, 1918
Hpy8I GTNNAC 3 cut(s) 401, 831, 1087
Hpy99I CGWCG 1 cut(s) 575
HpyCH4III ACNGT 4 cut(s) 115, 462, 1208, 1571
HpyCH4IV ACGT 3 cut(s) 573, 755, 1736
HpyF10VI GCNNNNNNNGC 4 cut(s) 324, 802, 956, 1715
HpyF3I CTNAG 5 cut(s) 210, 448, 555, 638, 1095
HpySE526I ACGT 3 cut(s) 573, 755, 1736
Hsp92I GRCGYC 2 cut(s) 573, 755
Hsp92II CATG 9 cut(s) 331, 359, 484, 990, 1120, 1204, 1769, 1817, 1865
HspAI GCGC 2 cut(s) 1613, 1845
Ksp22I TGATCA 1 cut(s) 1782
Kzo9I GATC 6 cut(s) 262, 404, 679, 705, 1782, 1876
LmnI GCTCC 2 cut(s) 214, 1899
Lsp1109I GCAGC 2 cut(s) 943, 1172
LweI GCATC 6 cut(s) 60, 520, 871, 895, 1333, 1828
MaeI CTAG 2 cut(s) 719, 1641
MaeII ACGT 3 cut(s) 573, 755, 1736
MaeIII GTNAC 5 cut(s) 456, 1462, 1471, 1571, 1634
MalI GATC 6 cut(s) 264, 406, 681, 707, 1784, 1878
MboI GATC 6 cut(s) 262, 404, 679, 705, 1782, 1876
MboII GAAGA 7 cut(s) 71, 323, 452, 829, 1581, 1793, 1906
MfeI CAATTG 3 cut(s) 861, 1704, 1710
MhlI GDGCHC 4 cut(s) 369, 798, 1720, 1904
MluI ACGCGT 1 cut(s) 1241
MlyI GAGTC 4 cut(s) 343, 415, 464, 1007
MmeI TCCRAC 1 cut(s) 783
MseI TTAA 8 cut(s) 17, 158, 549, 1355, 1400, 1509, 1566, 1733
MslI CAYNNNNRTG 1 cut(s) 1521
MspI CCGG 1 cut(s) 324
MspR9I CCNGG 4 cut(s) 433, 857, 1165, 1896
MunI CAATTG 3 cut(s) 861, 1704, 1710
MvaI CCWGG 4 cut(s) 433, 857, 1165, 1896
MvnI CGCG 2 cut(s) 1243, 1845
MwoI GCNNNNNNNGC 4 cut(s) 324, 802, 956, 1715
NdeI CATATG 1 cut(s) 280
NdeII GATC 6 cut(s) 262, 404, 679, 705, 1782, 1876
NlaIII CATG 9 cut(s) 331, 359, 484, 990, 1120, 1204, 1769, 1817, 1865
NlaIV GGNNCC 5 cut(s) 170, 797, 848, 1033, 1901
NmeAIII GCCGAG 1 cut(s) 331
NmuCI GTSAC 4 cut(s) 456, 1471, 1571, 1634
NspI RCATGY 2 cut(s) 1120, 1817
PagI TCATGA 1 cut(s) 1765
PasI CCCWGGG 1 cut(s) 432
PciI ACATGT 1 cut(s) 1116
PfeI GAWTC 3 cut(s) 385, 467, 1882
PflFI GACNNNGTC 2 cut(s) 572, 1055
PflMI CCANNNNNTGG 1 cut(s) 1895
PkrI GCNGC 3 cut(s) 958, 969, 1162
PleI GAGTC 4 cut(s) 343, 415, 463, 1007
PpsI GAGTC 4 cut(s) 343, 415, 463, 1007
PpuMI RGGWCCY 3 cut(s) 846, 1031, 1759
PscI ACATGT 1 cut(s) 1116
Psp1406I AACGTT 1 cut(s) 1736
Psp5II RGGWCCY 3 cut(s) 846, 1031, 1759
Psp6I CCWGG 4 cut(s) 431, 855, 1163, 1894
PspFI CCCAGC 1 cut(s) 1193
PspGI CCWGG 4 cut(s) 431, 855, 1163, 1894
PspN4I GGNNCC 5 cut(s) 170, 797, 848, 1033, 1901
PspPI GGNCC 5 cut(s) 599, 846, 1031, 1759, 1856
PspPPI RGGWCCY 3 cut(s) 846, 1031, 1759
PsyI GACNNNGTC 2 cut(s) 572, 1055
RsaI GTAC 5 cut(s) 272, 767, 1086, 1175, 1582
RsaNI GTAC 5 cut(s) 271, 766, 1085, 1174, 1581
RseI CAYNNNNRTG 1 cut(s) 1521
SaqAI TTAA 8 cut(s) 17, 158, 549, 1355, 1400, 1509, 1566, 1733
SatI GCNGC 3 cut(s) 957, 968, 1161
Sau3AI GATC 6 cut(s) 262, 404, 679, 705, 1782, 1876
Sau96I GGNCC 5 cut(s) 599, 846, 1031, 1759, 1856
ScaI AGTACT 1 cut(s) 767
SchI GAGTC 4 cut(s) 343, 415, 464, 1007
ScrFI CCNGG 4 cut(s) 433, 857, 1165, 1896
SduI GDGCHC 4 cut(s) 369, 798, 1720, 1904
SfaNI GCATC 6 cut(s) 60, 520, 871, 895, 1333, 1828
SfcI CTRYAG 3 cut(s) 372, 831, 1616
SinI GGWCC 4 cut(s) 846, 1031, 1759, 1856
SmiMI CAYNNNNRTG 1 cut(s) 1521
SmlI CTYRAG 1 cut(s) 1133
SmoI CTYRAG 1 cut(s) 1133
SsiI CCGC 3 cut(s) 967, 1188, 1870
SspI AATATT 1 cut(s) 665
SspMI CTAG 2 cut(s) 719, 1641
StyD4I CCNGG 4 cut(s) 431, 855, 1163, 1894
StyI CCWWGG 1 cut(s) 1725
TaaI ACNGT 4 cut(s) 115, 462, 1208, 1571
TaiI ACGT 3 cut(s) 576, 758, 1739
TaqI TCGA 1 cut(s) 1651
TaqII GACCGA 2 cut(s) 219, 1787
TatI WGTACW 3 cut(s) 765, 1084, 1173
TauI GCSGC 1 cut(s) 970
TfiI GAWTC 3 cut(s) 385, 467, 1882
Tru1I TTAA 8 cut(s) 17, 158, 549, 1355, 1400, 1509, 1566, 1733
Tru9I TTAA 8 cut(s) 17, 158, 549, 1355, 1400, 1509, 1566, 1733
TscAI CASTG 7 cut(s) 114, 272, 395, 465, 1480, 1576, 1912
TseFI GTSAC 4 cut(s) 456, 1471, 1571, 1634
TseI GCWGC 2 cut(s) 956, 1160
Tsp45I GTSAC 4 cut(s) 456, 1471, 1571, 1634
TspDTI ATGAA 8 cut(s) 219, 255, 453, 1217, 1381, 1669, 1713, 1754
TspRI CASTG 7 cut(s) 114, 272, 395, 465, 1480, 1576, 1912
Tth111I GACNNNGTC 2 cut(s) 572, 1055
Van91I CCANNNNNTGG 1 cut(s) 1895
VpaK11BI GGWCC 4 cut(s) 846, 1031, 1759, 1856
XagI CCTNNNNNAGG 2 cut(s) 176, 854
XapI RAATTY 5 cut(s) 122, 443, 869, 931, 1557
XbaI TCTAGA 1 cut(s) 1640
XceI RCATGY 2 cut(s) 1120, 1817
XmiI GTMKAC 1 cut(s) 830
XspI CTAG 2 cut(s) 719, 1641
ZraI GACGTC 2 cut(s) 574, 756
ZrmI AGTACT 1 cut(s) 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.