Rorug01G0281100

cytochrome

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0011592
Physical Location & Seq
Reverse (-)
39420213 .. 39429401
9189 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0281100.1

Sequence Viewer

Length: 2433 bp
ATGGACTCCGAATCAGTGATTGAGTTTCTGGGCTGCGTTCCTCTGCTTCAGCGCCTACCCAGCTCCTCGCTCAAGAAAATCGCCCAGCTCGTTGTTTCAAAGCACTACGAAAAAGGAGAGTATGTTGTTCGTGAAGGGGAGGTTGGGATTGGGGTTTACTTCATTTGGGAAGGAGAGGCTGAAGTTACTGGGTCTGTTAATGCTGATGAAGACAATCGGCCGGAGTTTCAGTTGAAGCGATACGATTACTTTGGTTATGGTTTTAAAGCATTAGGTCATCAAGCTGATGTAATTGCTTCATCTAAGCTGACATGCTTGGTGCTACCCCATGAACATTATTCTCTGCTGCAGTCAAAATCAATCTGGCATGCTGATAAAGCTCTTGAGACATGCTCTCTTGTTGAGAATATATTGCATTTGGAGCCAATTGAAGCAAATATATTTCAGGGGATTACTTTACCGGACGCACCAAGATTTGGACAGGTTTTCGGAGGACAGTTAGTTGGACAGGCATTGGCTGCAGCAACAAAAACTGTTGATTGTCTCAAAGTCGTCCATAGTTTGCATGCACATTTTTTGCTTGTCGGGGATTTCAACACACCAATTATATATCAAGTTCACCGAGTACGTGATGGAAAGAGCTTTGCTACTCGAAGAGTAGATGCAATACAAAAAGGGATAAACATATTCACTCTACTGGCTTCCTTTCAAAAAGAAGAAGAAGGGTCTGTCCACCAGGAAGCCATAATGCCATCTGTGCCTCCCCCAGATACGCTCCCATCAATGGAAGAACTGCGTGAAAGACGCCTTTTTGATCCCCGTCTTCCAAGAACTTATCGAATCAAGGTAGCTGCAAAGGAGTTTGTCCCGTGGCCAATTGAGATACGATTTTGTGAACCTAGTAGCCGGACCAATCAGACTAAATCTCCACCAAGATTGAGGTTCTGGTTTAGAGCAAAAGGAAAACTTTCAGATGATCAGGCTTTGCATAGATGTGTTGTGGCTTATGCTTCAGATTTGATATTCGCTGGCGTAAGTCTGAATCCTCACCGTAGAAGAGGACATAAAACAAGTCAAGTTAGTTTGGACCATGCATTGTGGTTTCACCGCCCCCTTAGAGCTGATGACTGGTTACTACATGTGATAGTGAGTCCCATTGCCTACAACGCACGCGGCTATGTCACAGGCCAAATGTTCAATACCAAGGGAGAGAATCCATTGAACCCCAACAACGTGGTTCCAACCCCAATTCTCAAGCCAACAGCTTCCCAGCTTTTAGTAGTGTACCGAGTGTCGAGCTTTATAGGGAGTCGGAAATTTCGGCTGCGATGGAAATTCACTTACTGCAACATTAGAATGGAACAGCCTGGTAATGGAACAGATGGGATCAGTCAAATGGAACCGGCCCAACAGCCACTGATATCTGGACTTCCTGATGACATTGCTCTTTTCTGCATGGCAAGGGTTCCCCGAAAGTACCACACAGTCCTAAAGTGTGTTTCAAAAAGATGGCAACACTTGGTGGGCAGTGAAGAGTGGCATTCCTACCGTCGAAAGCATAATCTTGATGAGACTTGGATCTATGCTTTGTGCCGAGACAAATTGGAGCGTCTTTGCTTGTATATATTGGATCCAAAGTCATCAAGAAGGAGTTGGAAGCTTGTTAATGAGCTTCCTCCTCGCACCTTGAAGAGAAAAGGCATGGGTTTTGAAGTGCTAGGAAAGAAAGTTTACTTGTTGGGTGGTTGCGGTTGGTGTGAAGATGCTACAGATGAGGTCTACTACTATGATGCTTCCCTGAACACTTGGAGTGAAGCTGCTTCCTTATCTATTGCTAGGTGCTATTTTGCCTGTGAAGTATTAGATGAGAAAATATATTCCATTGGTGGATTAGGTTCAAATTCAAGTGATCCACATTCTTGGGACATTTATGATCCTAGCACTAATAGTTGGATATTTCACTCAGACCCAAACATTGTCCCTGAAATTGAGGATTCTGTGGTCATGGATGGGAAAATCTACATCCGATGTGGCACTTCTGCTGTAACTTCTCATGTCTATGCTGTTGTTTATGAACCATCAAGCGGTACATGGCAGCATGCAGATGCTGATATGGTTTCTGGCTGGCGAGGTCCGGCAGTTGTAATAGACGAGACCCTCTATGTATTGGATCAGAGCTCAGGAACTAGGCTGATGATGTGGCAGAAGGAGACTAGGGAATGGATTCCAGTTGGGAGGCTGTCATCCTTGCTTACCAGACCACCCTGTCAACTCGTAGCTATTGGGAAGAGTATTTATGTTGTCGGAAAGGGGCTTAGCACAGTCATGTTTGATGTTAAAAATGCAGGGAATATGGAAGGGGTAATTGTGAGTTCTTCAATACCTAAATTGAATTCTGATGATGTAATCAGCTGTAAGTGTTTGTCCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cyt-b5

Protein Analysis

810

Amino Acids

91.42

Weight (kDa)

8.13

Isoelectric Point (pI)

40.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
cNMP_binding PF00027 34 - 112 8.6e-08 Cyclic nucleotide-binding domain
4HBT_3 PF13622 158 - 237 1.8e-17 Acyl-CoA thioesterase N-terminal domain
4HBT_3C PF20789 302 - 404 6.5e-19 Acyl-CoA thioesterase C-terminal domain
Acyl_CoA_thio PF02551 307 - 404 3.2e-21 Acyl-CoA thioesterase
F-box PF00646 474 - 512 1.3e-06 F-box domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 539 - 651 2.1e-07 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 540 - 702 1.8e-09 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Kelch_FKB95 PF25210 546 - 754 1.4e-27 FKB95, Kelch-repeats domain
Beta-prop_ATRN-LZTR1 PF24981 548 - 722 5.5e-07 Attractin/LZTR1 beta-propeller
Kelch_1 PF01344 565 - 609 4.1e-07 Kelch motif
Beta-prop_Calicin PF13964 565 - 727 3.7e-09 Calicin, beta-propeller domain
Kelch_1 PF01344 612 - 651 2.1e-06 Kelch motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2265
AccB7I CCANNNNNTGG 1 cut(s) 476
AccI GTMKAC 1 cut(s) 1779
AccII CGCG 1 cut(s) 1173
AciI CCGC 4 cut(s) 1108, 1173, 1749, 2085
AclWI GGATC 8 cut(s) 809, 1394, 1586, 1625, 1638, 1904, 1928, 2178
AcoI YGGCCR 2 cut(s) 218, 872
AcsI RAATTY 4 cut(s) 1316, 1334, 1900, 2392
AcuI CTGAAG 3 cut(s) 32, 201, 996
AcyI GRCGYC 1 cut(s) 805
AdeI CACNNNGTG 1 cut(s) 1522
AfaI GTAC 4 cut(s) 627, 1286, 1478, 2089
AfiI CCNNNNNNNGG 4 cut(s) 476, 784, 1373, 2084
AflIII ACRYGT 1 cut(s) 1138
AjnI CCWGG 2 cut(s) 735, 1366
AjuI GAANNNNNNNTTGG 2 cut(s) 126, 158
Alw21I GWGCWC 1 cut(s) 2180
Alw26I GTCTC 6 cut(s) 380, 548, 1565, 1590, 2147, 2204
AlwI GGATC 8 cut(s) 809, 1394, 1586, 1625, 1638, 1904, 1928, 2178
AlwNI CAGNNNCTG 2 cut(s) 1417, 2108
AoxI GGCC 4 cut(s) 218, 872, 1186, 1404
ApeKI GCWGC 8 cut(s) 33, 346, 518, 521, 851, 1324, 1817, 2095
ApoI RAATTY 4 cut(s) 1316, 1334, 1900, 2392
Asp700I GAANNNNTTC 2 cut(s) 967, 2223
AspLEI GCGC 1 cut(s) 54
AspS9I GGNCC 4 cut(s) 909, 1087, 1405, 2132
AsuHPI GGTGA 3 cut(s) 611, 1040, 1097
AvaII GGWCC 3 cut(s) 909, 1087, 2132
BalI TGGCCA 1 cut(s) 874
BamHI GGATCC 1 cut(s) 1630
BanII GRGCYC 1 cut(s) 2180
BbsI GAAGAC 2 cut(s) 216, 815
Bbv12I GWGCWC 1 cut(s) 2180
BbvI GCAGC 8 cut(s) 20, 333, 505, 533, 838, 1311, 1804, 2107
BccI CCATC 8 cut(s) 626, 760, 787, 1323, 1376, 1503, 2003, 2086
BciT130I CCWGG 2 cut(s) 737, 1368
BclI TGATCA 1 cut(s) 976
BcoDI GTCTC 6 cut(s) 380, 548, 1565, 1590, 2147, 2204
BfaI CTAG 6 cut(s) 900, 1718, 1836, 1938, 2187, 2214
BfmI CTRYAG 3 cut(s) 347, 519, 1767
BfoI RGCGCY 1 cut(s) 55
BisI GCNGC 9 cut(s) 34, 347, 519, 522, 852, 1174, 1325, 1818, 2096
BlpI GCTNAGC 1 cut(s) 2315
BlsI GCNGC 9 cut(s) 35, 348, 520, 523, 853, 1175, 1326, 1819, 2097
Bme1390I CCNGG 2 cut(s) 737, 1368
Bme18I GGWCC 3 cut(s) 909, 1087, 2132
BmgT120I GGNCC 4 cut(s) 909, 1087, 1405, 2132
BmiI GGNNCC 5 cut(s) 423, 1239, 1401, 1467, 1632
BmrFI CCNGG 2 cut(s) 737, 1368
BmrI ACTGGG 1 cut(s) 198
BmsI GCATC 4 cut(s) 652, 1753, 1780, 2095
BmuI ACTGGG 1 cut(s) 198
BpiI GAAGAC 2 cut(s) 216, 815
BplI GAGNNNNNCTC 2 cut(s) 377, 409
Bpu10I CCTNAGC 1 cut(s) 2179
Bpu1102I GCTNAGC 1 cut(s) 2315
BpuEI CTTGAG 3 cut(s) 56, 404, 1238
BsaAI YACGTR 1 cut(s) 629
BsaHI GRCGYC 1 cut(s) 805
BsaI GGTCTC 1 cut(s) 2147
BsaJI CCNNGG 2 cut(s) 869, 1203
BsaWI WCCGGW 1 cut(s) 460
BsaXI ACNNNNNCTCC 6 cut(s) 108, 138, 215, 245, 910, 940
Bsc4I CCNNNNNNNGG 4 cut(s) 476, 784, 1373, 2084
Bse118I RCCGGY 1 cut(s) 1402
Bse1I ACTGG 4 cut(s) 193, 702, 1133, 2228
Bse3DI GCAATG 2 cut(s) 1155, 1440
BseBI CCWGG 2 cut(s) 737, 1368
BseDI CCNNGG 2 cut(s) 869, 1203
BseGI GGATG 3 cut(s) 2014, 2022, 2243
BseLI CCNNNNNNNGG 4 cut(s) 476, 784, 1373, 2084
BseMI GCAATG 2 cut(s) 1155, 1440
BseMII CTCAG 2 cut(s) 1977, 2193
BseNI ACTGG 4 cut(s) 193, 702, 1133, 2228
BseRI GAGGAG 2 cut(s) 55, 1668
BseX3I CGGCCG 1 cut(s) 218
BseXI GCAGC 8 cut(s) 20, 333, 505, 533, 838, 1311, 1804, 2107
BseYI CCCAGC 3 cut(s) 59, 84, 1269
Bsh1236I CGCG 1 cut(s) 1173
Bsh1285I CGRYCG 1 cut(s) 221
BshFI GGCC 4 cut(s) 220, 874, 1188, 1406
BsiEI CGRYCG 1 cut(s) 221
BsiHKAI GWGCWC 1 cut(s) 2180
BsiSI CCGG 5 cut(s) 221, 461, 907, 1403, 2135
BslFI GGGAC 4 cut(s) 851, 1137, 1937, 1964
BslI CCNNNNNNNGG 4 cut(s) 476, 784, 1373, 2084
BsmAI GTCTC 6 cut(s) 380, 548, 1565, 1590, 2147, 2204
BsmFI GGGAC 4 cut(s) 851, 1137, 1937, 1964
BsmI GAATGC 1 cut(s) 1540
BsnI GGCC 4 cut(s) 220, 874, 1188, 1406
Bso31I GGTCTC 1 cut(s) 2147
Bsp1286I GDGCHC 1 cut(s) 2180
Bsp143I GATC 8 cut(s) 814, 976, 1386, 1578, 1630, 1909, 1933, 2170
Bsp1720I GCTNAGC 1 cut(s) 2315
BspACI CCGC 4 cut(s) 1108, 1173, 1749, 2085
BspANI GGCC 4 cut(s) 220, 874, 1188, 1406
BspCNI CTCAG 2 cut(s) 1976, 2192
BspFNI CGCG 1 cut(s) 1173
BspLI GGNNCC 5 cut(s) 423, 1239, 1401, 1467, 1632
BspMAI CTGCAG 2 cut(s) 351, 523
BspPI GGATC 8 cut(s) 809, 1394, 1586, 1625, 1638, 1904, 1928, 2178
BspTNI GGTCTC 1 cut(s) 2147
BsrDI GCAATG 2 cut(s) 1155, 1440
BsrFI RCCGGY 1 cut(s) 1402
BsrI ACTGG 4 cut(s) 193, 702, 1133, 2228
BssAI RCCGGY 1 cut(s) 1402
BssECI CCNNGG 2 cut(s) 869, 1203
BssMI GATC 8 cut(s) 814, 976, 1386, 1578, 1630, 1909, 1933, 2170
BssNI GRCGYC 1 cut(s) 805
BssT1I CCWWGG 1 cut(s) 1203
Bst2UI CCWGG 2 cut(s) 737, 1368
Bst4CI ACNGT 6 cut(s) 498, 535, 1052, 1486, 1550, 2323
Bst6I CTCTTC 5 cut(s) 649, 1051, 1527, 1685, 2282
BstACI GRCGYC 1 cut(s) 805
BstAPI GCANNNNNTGC 1 cut(s) 518
BstBAI YACGTR 1 cut(s) 629
BstC8I GCNNGC 6 cut(s) 369, 567, 1030, 1171, 2100, 2126
BstDEI CTNAG 5 cut(s) 303, 1115, 1963, 2179, 2315
BstDSI CCRYGG 1 cut(s) 869
BstF5I GGATG 3 cut(s) 2014, 2022, 2243
BstFNI CGCG 1 cut(s) 1173
BstH2I RGCGCY 1 cut(s) 55
BstHHI GCGC 1 cut(s) 54
BstKTI GATC 8 cut(s) 817, 979, 1389, 1581, 1633, 1912, 1936, 2173
BstMAI GTCTC 6 cut(s) 380, 548, 1565, 1590, 2147, 2204
BstMBI GATC 8 cut(s) 814, 976, 1386, 1578, 1630, 1909, 1933, 2170
BstMCI CGRYCG 1 cut(s) 221
BstMWI GCNNNNNNNGC 6 cut(s) 60, 377, 421, 518, 757, 1166
BstNI CCWGG 2 cut(s) 737, 1368
BstNSI RCATGY 6 cut(s) 315, 371, 393, 569, 1142, 2102
BstSCI CCNGG 2 cut(s) 735, 1366
BstSFI CTRYAG 3 cut(s) 347, 519, 1767
BstUI CGCG 1 cut(s) 1173
BstV1I GCAGC 8 cut(s) 20, 333, 505, 533, 838, 1311, 1804, 2107
BstV2I GAAGAC 2 cut(s) 216, 815
BstX2I RGATCY 2 cut(s) 1578, 1630
BstXI CCANNNNNNTGG 2 cut(s) 1234, 1920
BstYI RGATCY 2 cut(s) 1578, 1630
BstZI CGGCCG 1 cut(s) 218
BsuRI GGCC 4 cut(s) 220, 874, 1188, 1406
BtgI CCRYGG 1 cut(s) 869
BtgZI GCGATG 1 cut(s) 1342
BtsCI GGATG 3 cut(s) 2014, 2022, 2243
BtsI GCAGTG 1 cut(s) 1534
BtsIMutI CAGTG 3 cut(s) 21, 1415, 1534
Cac8I GCNNGC 6 cut(s) 369, 567, 1030, 1171, 2100, 2126
CaiI CAGNNNCTG 2 cut(s) 1417, 2108
CfoI GCGC 1 cut(s) 54
Cfr10I RCCGGY 1 cut(s) 1402
Cfr13I GGNCC 4 cut(s) 909, 1087, 1405, 2132
CseI GACGC 3 cut(s) 473, 813, 1598
Csp6I GTAC 4 cut(s) 626, 1285, 1477, 2088
CspCI CAANNNNNGTGG 2 cut(s) 918, 953
CviQI GTAC 4 cut(s) 626, 1285, 1477, 2088
DdeI CTNAG 5 cut(s) 303, 1115, 1963, 2179, 2315
DpnI GATC 8 cut(s) 816, 978, 1388, 1580, 1632, 1911, 1935, 2172
DpnII GATC 8 cut(s) 814, 976, 1386, 1578, 1630, 1909, 1933, 2170
DraI TTTAAA 1 cut(s) 265
DraIII CACNNNGTG 1 cut(s) 1522
DrdI GACNNNNNNGTC 1 cut(s) 2265
DseDI GACNNNNNNGTC 1 cut(s) 2265
EaeI YGGCCR 2 cut(s) 218, 872
EagI CGGCCG 1 cut(s) 218
Eam1104I CTCTTC 5 cut(s) 649, 1051, 1527, 1685, 2282
EarI CTCTTC 5 cut(s) 649, 1051, 1527, 1685, 2282
Ecl136II GAGCTC 1 cut(s) 2178
EclXI CGGCCG 1 cut(s) 218
Eco130I CCWWGG 1 cut(s) 1203
Eco24I GRGCYC 1 cut(s) 2180
Eco31I GGTCTC 1 cut(s) 2147
Eco32I GATATC 1 cut(s) 1422
Eco47I GGWCC 3 cut(s) 909, 1087, 2132
Eco52I CGGCCG 1 cut(s) 218
Eco53kI GAGCTC 1 cut(s) 2178
Eco57I CTGAAG 3 cut(s) 32, 201, 996
EcoICRI GAGCTC 1 cut(s) 2178
EcoRI GAATTC 1 cut(s) 2392
EcoRII CCWGG 2 cut(s) 735, 1366
EcoRV GATATC 1 cut(s) 1422
EcoT14I CCWWGG 1 cut(s) 1203
EcoT22I ATGCAT 1 cut(s) 1096
EcoT38I GRGCYC 1 cut(s) 2180
ErhI CCWWGG 1 cut(s) 1203
FalI AAGNNNNNCTT 2 cut(s) 951, 983
FaqI GGGAC 4 cut(s) 851, 1137, 1937, 1964
FbaI TGATCA 1 cut(s) 976
FblI GTMKAC 1 cut(s) 1779
Fnu4HI GCNGC 9 cut(s) 34, 347, 519, 522, 852, 1174, 1325, 1818, 2096
FokI GGATG 3 cut(s) 2009, 2021, 2230
FriOI GRGCYC 1 cut(s) 2180
Fsp4HI GCNGC 9 cut(s) 34, 347, 519, 522, 852, 1174, 1325, 1818, 2096
FspBI CTAG 6 cut(s) 900, 1718, 1836, 1938, 2187, 2214
GlaI GCGC 1 cut(s) 53
GluI GCNGC 9 cut(s) 34, 347, 519, 522, 852, 1174, 1325, 1818, 2096
GsaI CCCAGC 3 cut(s) 63, 88, 1273
HaeII RGCGCY 1 cut(s) 55
HaeIII GGCC 4 cut(s) 220, 874, 1188, 1406
HapII CCGG 5 cut(s) 221, 461, 907, 1403, 2135
HgaI GACGC 3 cut(s) 473, 813, 1598
HhaI GCGC 1 cut(s) 54
Hin1I GRCGYC 1 cut(s) 805
Hin6I GCGC 1 cut(s) 52
HinP1I GCGC 1 cut(s) 52
HincII GTYRAC 1 cut(s) 2270
HindII GTYRAC 1 cut(s) 2270
HindIII AAGCTT 1 cut(s) 1658
HinfI GANTC 9 cut(s) 5, 11, 840, 1042, 1150, 1213, 1309, 1994, 2224
HpaII CCGG 5 cut(s) 221, 461, 907, 1403, 2135
HphI GGTGA 3 cut(s) 611, 1040, 1097
Hpy166II GTNNAC 8 cut(s) 157, 619, 733, 896, 1285, 1732, 1780, 2270
Hpy188III TCNNGA 8 cut(s) 73, 131, 383, 1425, 1433, 1565, 1644, 2181
Hpy8I GTNNAC 8 cut(s) 157, 619, 733, 896, 1285, 1732, 1780, 2270
Hpy99I CGWCG 1 cut(s) 1554
HpyAV CCTTC 6 cut(s) 128, 164, 716, 1641, 2200, 2351
HpyCH4III ACNGT 6 cut(s) 498, 535, 1052, 1486, 1550, 2323
HpyCH4IV ACGT 2 cut(s) 628, 1233
HpyF10VI GCNNNNNNNGC 6 cut(s) 60, 377, 421, 518, 757, 1166
HpyF3I CTNAG 5 cut(s) 303, 1115, 1963, 2179, 2315
HpySE526I ACGT 2 cut(s) 628, 1233
Hsp92I GRCGYC 1 cut(s) 805
HspAI GCGC 1 cut(s) 52
Ksp22I TGATCA 1 cut(s) 976
Kzo9I GATC 8 cut(s) 814, 976, 1386, 1578, 1630, 1909, 1933, 2170
LmnI GCTCC 4 cut(s) 68, 421, 780, 1606
Lsp1109I GCAGC 8 cut(s) 20, 333, 505, 533, 838, 1311, 1804, 2107
LweI GCATC 4 cut(s) 652, 1753, 1780, 2095
MaeI CTAG 6 cut(s) 900, 1718, 1836, 1938, 2187, 2214
MaeII ACGT 2 cut(s) 628, 1233
MaeIII GTNAC 4 cut(s) 184, 1131, 1180, 2044
MalI GATC 8 cut(s) 816, 978, 1388, 1580, 1632, 1911, 1935, 2172
MboI GATC 8 cut(s) 814, 976, 1386, 1578, 1630, 1909, 1933, 2170
MfeI CAATTG 2 cut(s) 426, 876
MflI RGATCY 2 cut(s) 1578, 1630
MhlI GDGCHC 1 cut(s) 2180
MlsI TGGCCA 1 cut(s) 874
MluNI TGGCCA 1 cut(s) 874
MlyI GAGTC 2 cut(s) 1159, 1318
MmeI TCCRAC 6 cut(s) 484, 1265, 1292, 1634, 1931, 2284
Mox20I TGGCCA 1 cut(s) 874
Mph1103I ATGCAT 1 cut(s) 1096
MroXI GAANNNNTTC 2 cut(s) 967, 2223
MscI TGGCCA 1 cut(s) 874
MseI TTAA 4 cut(s) 198, 264, 1665, 2337
MslI CAYNNNNRTG 5 cut(s) 993, 1355, 2058, 2103, 2324
Msp20I TGGCCA 1 cut(s) 874
MspA1I CMGCKG 1 cut(s) 2412
MspI CCGG 5 cut(s) 221, 461, 907, 1403, 2135
MspR9I CCNGG 2 cut(s) 737, 1368
MunI CAATTG 2 cut(s) 426, 876
Mva1269I GAATGC 1 cut(s) 1540
MvaI CCWGG 2 cut(s) 737, 1368
MvnI CGCG 1 cut(s) 1173
MwoI GCNNNNNNNGC 6 cut(s) 60, 377, 421, 518, 757, 1166
NdeII GATC 8 cut(s) 814, 976, 1386, 1578, 1630, 1909, 1933, 2170
NlaIV GGNNCC 5 cut(s) 423, 1239, 1401, 1467, 1632
NmeAIII GCCGAG 1 cut(s) 1619
NmuCI GTSAC 1 cut(s) 1180
NsiI ATGCAT 1 cut(s) 1096
NspI RCATGY 6 cut(s) 315, 371, 393, 569, 1142, 2102
PaeI GCATGC 3 cut(s) 371, 569, 2102
PciI ACATGT 1 cut(s) 1138
PcsI WCGNNNNNNNCGW 1 cut(s) 87
PctI GAATGC 1 cut(s) 1540
PdmI GAANNNNTTC 2 cut(s) 967, 2223
PfeI GAWTC 6 cut(s) 11, 840, 1042, 1213, 1994, 2224
PflMI CCANNNNNTGG 1 cut(s) 476
PkrI GCNGC 9 cut(s) 35, 348, 520, 523, 853, 1175, 1326, 1819, 2097
PleI GAGTC 2 cut(s) 1158, 1317
PpsI GAGTC 2 cut(s) 1158, 1317
Ppu21I YACGTR 1 cut(s) 629
PscI ACATGT 1 cut(s) 1138
Psp124BI GAGCTC 1 cut(s) 2180
Psp6I CCWGG 2 cut(s) 735, 1366
PspFI CCCAGC 3 cut(s) 59, 84, 1269
PspGI CCWGG 2 cut(s) 735, 1366
PspN4I GGNNCC 5 cut(s) 423, 1239, 1401, 1467, 1632
PspPI GGNCC 4 cut(s) 909, 1087, 1405, 2132
PstI CTGCAG 2 cut(s) 351, 523
PstNI CAGNNNCTG 2 cut(s) 1417, 2108
PsuI RGATCY 2 cut(s) 1578, 1630
PvuII CAGCTG 1 cut(s) 2412
RsaI GTAC 4 cut(s) 627, 1286, 1478, 2089
RsaNI GTAC 4 cut(s) 626, 1285, 1477, 2088
RseI CAYNNNNRTG 5 cut(s) 993, 1355, 2058, 2103, 2324
SacI GAGCTC 1 cut(s) 2180
SaqAI TTAA 4 cut(s) 198, 264, 1665, 2337
SatI GCNGC 9 cut(s) 34, 347, 519, 522, 852, 1174, 1325, 1818, 2096
Sau3AI GATC 8 cut(s) 814, 976, 1386, 1578, 1630, 1909, 1933, 2170
Sau96I GGNCC 4 cut(s) 909, 1087, 1405, 2132
SchI GAGTC 2 cut(s) 1159, 1318
ScrFI CCNGG 2 cut(s) 737, 1368
SduI GDGCHC 1 cut(s) 2180
SfaNI GCATC 4 cut(s) 652, 1753, 1780, 2095
SfcI CTRYAG 3 cut(s) 347, 519, 1767
SinI GGWCC 3 cut(s) 909, 1087, 2132
SmiMI CAYNNNNRTG 5 cut(s) 993, 1355, 2058, 2103, 2324
SmlI CTYRAG 3 cut(s) 71, 383, 1253
SmoI CTYRAG 3 cut(s) 71, 383, 1253
SphI GCATGC 3 cut(s) 371, 569, 2102
SsiI CCGC 4 cut(s) 1108, 1173, 1749, 2085
SspMI CTAG 6 cut(s) 900, 1718, 1836, 1938, 2187, 2214
SstI GAGCTC 1 cut(s) 2180
StyD4I CCNGG 2 cut(s) 735, 1366
StyI CCWWGG 1 cut(s) 1203
TaaI ACNGT 6 cut(s) 498, 535, 1052, 1486, 1550, 2323
TaiI ACGT 2 cut(s) 631, 1236
TaqI TCGA 4 cut(s) 652, 838, 1295, 1552
TauI GCSGC 1 cut(s) 1176
TfiI GAWTC 6 cut(s) 11, 840, 1042, 1213, 1994, 2224
Tru1I TTAA 4 cut(s) 198, 264, 1665, 2337
Tru9I TTAA 4 cut(s) 198, 264, 1665, 2337
TscAI CASTG 3 cut(s) 21, 1422, 1534
TseFI GTSAC 1 cut(s) 1180
TseI GCWGC 8 cut(s) 33, 346, 518, 521, 851, 1324, 1817, 2095
Tsp45I GTSAC 1 cut(s) 1180
TspDTI ATGAA 5 cut(s) 151, 222, 288, 345, 2088
TspRI CASTG 3 cut(s) 21, 1422, 1534
Van91I CCANNNNNTGG 1 cut(s) 476
VpaK11BI GGWCC 3 cut(s) 909, 1087, 2132
XapI RAATTY 4 cut(s) 1316, 1334, 1900, 2392
XceI RCATGY 6 cut(s) 315, 371, 393, 569, 1142, 2102
XmiI GTMKAC 1 cut(s) 1779
XmnI GAANNNNTTC 2 cut(s) 967, 2223
XspI CTAG 6 cut(s) 900, 1718, 1836, 1938, 2187, 2214
Zsp2I ATGCAT 1 cut(s) 1096
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.