Rorug02G0009700

No description available

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
803732 .. 810150
6419 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0009700.1

Sequence Viewer

Length: 2880 bp
ATGGCGAGAGGACCTCTCGCTCTTCAGCTATGGATCTCGCTCTGCCTTTCGCTCCTTCTTCGTGCTCGCTGCTTCTACCTCCCTGGTGTAGCGCCTCAGGATTTCCAAAACGGAGCTCCCTTGAATGTGAAGGTGAACAAACTAACCTCCACAAAAACTCAACTTCCTTACTCATTCTATTCCCTCCCATACTGTCGTCCAGAGCGTATAATTGACAGTGCAGAGAATCTTGGGGAAGTTCTTCGTGGTGATCGCATTGAAAACTCTCCTTATGAGTTCAAAATGCGAGAGCCACAGTTGTGCACTGTTGCATGTCGTATCATTCTTAATGCAAAAACTGCAAAGGAATTTAAAGAAAAGATAGATGATGAGTATCGGGTGAACATGATTTTGGATAATCTCCCTCTGGTTGTTCCTATACCAAGGCCTGATCAGGAAAATTCCTTGGTGTATCAACATGGCTTTCATGTTGGTCTCAGAGGACAATATGCTGGGAACAAGGACGAAAAGCATTTTGTTAACAATCACTTAACTTTTACGGTCAAATATCACAAAGATCCAATGACAGAATCTGCCAGGATTGTTGGGTTTGAGGTCAAACCGTTCAGTGTTAGGCATGAATATGAAGGTGAGTGGAGTGGGAAGACGCGTCTAACAACCTGTGATCCCCATGCAAAGCGCATGGTTACCAGCTCCGAATCTCCTCAAGAGGTTGAAGATAAAATGGAAATTATATTCACATATGATGTTGACTTCCAGGAGAGTGATGTGAAGTGGGCATCTCGCTGGGACACATATCTTCTGATGGCTGATGATCAAATCCACTGGTTCTCAATTGTTAATTCTTTAATGATTGTTCTTTTCTTATCGGGCATGGTAGCTATGATCATGTTGAGGACACTTTACCGGGATATCTCCAAGTACAACCAACTGGAGACCCAAGAAGAAGCCCAAGAAGAGACAGGATGGAAATTGGTCCATGGTGACGTGTTCAGACCTCCAGTAAACTCAGATCTACTGTGCGTGTATGTTGGCACAGGTGTTCAGTTCTTTGGGATGATTGTTGTCACTATGCTCTTTGCTGTCCTTGGATTCCTCTCCCCTTCAAATCGTGGTGGGCTGATGACGGCCATGCTCCTCCTCTGGGTCTTTATGGGTCTTTTTGGTGGATACGCTTCAGTCCGTCTGTACAAGTTGTTTAAGGGAACAGAATGGAAGAAAATCTCTCTCAAAACAGCCTTCATGTTCCCTGCAGTAGTGTTTTCCATTTTCTTTGTCTTGAATGCTCTTATCTGGGGTGAGAAGTCGTCTGGGGCAGTGCCATTTGGAACCATGTTTGCTCTGGTATTTTTATGGTTTGGCATTTCAGTTCCACTTATATTTGTTGGTGCCTATGTGGGCTTTAGGAAGCCAGCGATTGAGGATCCTGTGAAAACCAACAAGATCCCTAGACAAGTGCCAGAACAGGCTTGGTACATGCATCCAGTTTTCTCTATCTTAATTGGAGGCATACTGCCATTTGGCGCTGTCTTTATTGAGCTCTTCTTCATCCTTACCTCAATATGGTTGCATCAGTTCTATTACATATTTGGATTCCTATTCATCGTCTTCATTATCCTCATCATCACTTGTGCGGAGATCACCATTGTGCTATGCTACTTCCAGCTGTGCAGTGAAGACTACTTTTGGTGGTGGAGATCGTATTTGACTTCAGGCTCATCAGCACTGTATCTTTTCCTATATGCAGCCTTTTACTTCTTCACTAAGCTTGACATTAAGAAGCCAGTATCTGGAGCCTTATACTTCGGGTATATGCTCATTGCTTCATATTCTTTCTTCGTGCTGACCGGTTACAAGCAATCCAGGTTGCCATCAACTTCGTCTTTGTTGCCGCTGTTCACTCAGAAGGGACTAACTATTGGGTGCTCTCCGCGCAGACGTCCCATTTTGGGAAAGCTTAGTAATTCTGCTTGTCTTAGTGTTTTATGCATTCCAAGGAAGCCAGTTGGGATATCATGGTGTGACATTGATGCCAAAGAGGAGTTTGTCAGACCTTATAATGATGTCAGATTGCATAACCAGCATAAATCGTCCAGGCTTACAGTTGTACATTGTGGACTTGTTGAAACTGGAACCCCTGATGAAGCCTTACCAGAAGTAAATATGGTCTCAAAAGTTAGGGGGCTGTGCTTTTATGCCATTACTGCCTTTAATGCCATTTATCTCTTTGCACTGATGGTAGTAGCCCATCCTTTTGTTCTGTTGTTGGATCGATATAGAAGACGAGCTCAATTTTTTATTGCCAAAATTTGGGCCACTTTTGCTGTTACTCCGTTTCTCAATATCAAGTTTGAGGGACTGGAGAATTTGCCTCCTCCAGATGTTCCTGCTGTATATGTTTCTAACCACCAGAGCTTTTTAGACATATATGTTCTTCTCACTATTGGGAGACCCTATAAGTTTATTAGCAAGACTAGCATATTCCTCATTCCCATTATTGGGTGGGCCATGTTTCTACTAGGCGTGATTCCTTTAAAGCGCATGGACAGCAAAAGCCAATTGGAATGTCTTAAACGTTGCATATATCTTCTCAAGAAGGGGTCCTCTGTCTTTTTCTTCCCTGAGGGAACACGCAGTAAAGATGGAAAATTAGGGGATTTCAAGAAAGGTGCCTTCAGTCTTGCAGCAAAGACGAATGTGCCAGTGGTGCCTATTACTCTTATAGGAACTGGGAAAATCATGCCTGTAGGAAAGGAGGGTATCTTGAACACTGGACCTGTTAAAGTTGTTATACATAAACCGATAGAAGGAACTGATACAGAAACACTGCGCAGAGAAAGTAGAAACATAATTGCAGAAGCACTCAATTGTCAAGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

959

Amino Acids

109.08

Weight (kDa)

9.03

Isoelectric Point (pI)

41.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EMP70 PF02990 56 - 593 4.8e-220 Endomembrane protein 70
Acyltransferase PF01553 782 - 907 7.1e-32 Acyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016631)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G52342
fragaria_vesca FvH4_1g05030
prunus_persica Prupe.7G229700_v2.0.a1
pyrus_communis pycom02g04070 pycom15g16740
rosa_chinensis RchiOBHm_Chr2g0090641
rosa_laevigata RLG00000016127
rosa_roxburghii Rroxscaffold_2G00150930
rosa_rugosa Rorug02G0009700
rosa_samantha Rh2AG055600 Rh2BG054000 Rh2CG056300 Rh2DG055000
rosa_wichuraiana Rw2G004720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2058
AatII GACGTC 1 cut(s) 1942
Acc16I TGCGCA 1 cut(s) 2831
AccB1I GGYRCC 3 cut(s) 1388, 2669, 2707
AccB7I CCANNNNNTGG 2 cut(s) 1790, 2310
AccII CGCG 2 cut(s) 649, 1933
AciI CCGC 3 cut(s) 1634, 1892, 1931
AclI AACGTT 1 cut(s) 2575
AclWI GGATC 7 cut(s) 41, 551, 659, 1418, 1431, 1438, 2277
AcoI YGGCCR 1 cut(s) 1128
AcsI RAATTY 4 cut(s) 347, 439, 2307, 2365
AcuI CTGAAG 4 cut(s) 8, 1161, 1695, 2659
AcyI GRCGYC 1 cut(s) 1939
AfaI GTAC 4 cut(s) 923, 1190, 1475, 2109
AfiI CCNNNNNNNGG 8 cut(s) 1144, 1563, 1790, 1949, 2310, 2498, 2499, 2807
AflIII ACRYGT 2 cut(s) 647, 987
AgeI ACCGGT 1 cut(s) 1847
AgsI TTSAA 9 cut(s) 124, 260, 280, 716, 1107, 1282, 2126, 2662, 2767
AjiI CACGTC 1 cut(s) 988
AjnI CCWGG 5 cut(s) 82, 575, 756, 1862, 2093
AjuI GAANNNNNNNTTGG 2 cut(s) 374, 406
AleI CACNNNNGTG 2 cut(s) 298, 1646
Alw21I GWGCWC 6 cut(s) 67, 118, 305, 1542, 1928, 2290
Alw26I GTCTC 5 cut(s) 479, 929, 953, 2173, 2443
Alw44I GTGCAC 1 cut(s) 301
AlwI GGATC 7 cut(s) 41, 551, 659, 1418, 1431, 1438, 2277
AlwNI CAGNNNCTG 2 cut(s) 572, 1790
AoxI GGCC 4 cut(s) 425, 1128, 2313, 2505
ApaLI GTGCAC 1 cut(s) 301
ApeKI GCWGC 3 cut(s) 69, 1745, 2684
ApoI RAATTY 4 cut(s) 347, 439, 2307, 2365
AsiGI ACCGGT 1 cut(s) 1847
Asp700I GAANNNNTTC 1 cut(s) 240
AspLEI GCGC 6 cut(s) 94, 681, 1526, 1935, 2541, 2832
AspS9I GGNCC 6 cut(s) 11, 976, 2313, 2505, 2601, 2774
AsuC2I CCSGG 1 cut(s) 908
AsuHPI GGTGA 7 cut(s) 145, 260, 391, 641, 995, 1310, 1633
AvaII GGWCC 4 cut(s) 11, 976, 2601, 2774
AxyI CCTNAGG 2 cut(s) 96, 2622
BaeGI GKGCMC 1 cut(s) 305
BamHI GGATCC 1 cut(s) 1423
BanI GGYRCC 3 cut(s) 1388, 2669, 2707
BanII GRGCYC 3 cut(s) 118, 1542, 2290
BbsI GAAGAC 4 cut(s) 650, 1600, 1683, 2287
Bbv12I GWGCWC 6 cut(s) 67, 118, 305, 1542, 1928, 2290
BbvI GCAGC 3 cut(s) 56, 1757, 2696
BccI CCATC 6 cut(s) 799, 960, 1879, 2230, 2256, 2636
BceAI ACGGC 1 cut(s) 1143
BciT130I CCWGG 5 cut(s) 84, 577, 758, 1864, 2095
BciVI GTATCC 1 cut(s) 1163
BclI TGATCA 3 cut(s) 430, 814, 885
BcnI CCSGG 1 cut(s) 908
BcoDI GTCTC 5 cut(s) 479, 929, 953, 2173, 2443
BfaI CTAG 3 cut(s) 1449, 2475, 2519
BfmI CTRYAG 2 cut(s) 1251, 2745
BfoI RGCGCY 2 cut(s) 95, 1527
BfuI GTATCC 1 cut(s) 1163
BglII AGATCT 1 cut(s) 1012
BisI GCNGC 4 cut(s) 70, 1746, 1892, 2685
BlsI GCNGC 4 cut(s) 71, 1747, 1893, 2686
Bme1390I CCNGG 6 cut(s) 84, 577, 758, 908, 1864, 2095
Bme18I GGWCC 4 cut(s) 11, 976, 2601, 2774
BmgBI CACGTC 1 cut(s) 988
BmgT120I GGNCC 6 cut(s) 11, 976, 2313, 2505, 2601, 2774
BmiI GGNNCC 8 cut(s) 1330, 1390, 1425, 1795, 2134, 2602, 2671, 2709
BmrFI CCNGG 6 cut(s) 84, 577, 758, 908, 1864, 2095
BmrI ACTGGG 1 cut(s) 2739
BmsI GCATC 4 cut(s) 788, 1489, 1579, 2020
BmuI ACTGGG 1 cut(s) 2739
BpiI GAAGAC 4 cut(s) 650, 1600, 1683, 2287
BplI GAGNNNNNCTC 2 cut(s) 30, 32
BpmI CTGGAG 5 cut(s) 953, 984, 1812, 2361, 2381
BpuEI CTTGAG 2 cut(s) 690, 2576
BpuMI CCSGG 1 cut(s) 908
Bsa29I ATCGAT 1 cut(s) 2272
BsaBI GATNNNNATC 1 cut(s) 372
BsaHI GRCGYC 1 cut(s) 1939
BsaI GGTCTC 4 cut(s) 479, 929, 2173, 2443
BsaJI CCNNGG 6 cut(s) 82, 422, 444, 979, 1087, 1994
BsaWI WCCGGW 1 cut(s) 1847
Bsc4I CCNNNNNNNGG 8 cut(s) 1144, 1563, 1790, 1949, 2310, 2498, 2499, 2807
Bse118I RCCGGY 1 cut(s) 1847
Bse21I CCTNAGG 2 cut(s) 96, 2622
Bse3DI GCAATG 1 cut(s) 1818
Bse8I GATNNNNATC 1 cut(s) 372
BseBI CCWGG 5 cut(s) 84, 577, 758, 1864, 2095
BseCI ATCGAT 1 cut(s) 2272
BseDI CCNNGG 6 cut(s) 82, 422, 444, 979, 1087, 1994
BseGI GGATG 5 cut(s) 971, 1062, 1480, 1548, 2248
BseJI GATNNNNATC 1 cut(s) 372
BseLI CCNNNNNNNGG 8 cut(s) 1144, 1563, 1790, 1949, 2310, 2498, 2499, 2807
BseMI GCAATG 1 cut(s) 1818
BseMII CTCAG 5 cut(s) 110, 490, 1023, 1916, 2613
BseRI GAGGAG 5 cut(s) 693, 1127, 1130, 2054, 2364
BseSI GKGCMC 1 cut(s) 305
BseXI GCAGC 3 cut(s) 56, 1757, 2696
BseYI CCCAGC 2 cut(s) 491, 786
BsgI GTGCAG 2 cut(s) 240, 1690
Bsh1236I CGCG 2 cut(s) 649, 1933
BshFI GGCC 4 cut(s) 427, 1130, 2315, 2507
BshNI GGYRCC 3 cut(s) 1388, 2669, 2707
BshTI ACCGGT 1 cut(s) 1847
BshVI ATCGAT 1 cut(s) 2272
BsiHKAI GWGCWC 6 cut(s) 67, 118, 305, 1542, 1928, 2290
BsiSI CCGG 2 cut(s) 907, 1848
BslFI GGGAC 4 cut(s) 803, 1923, 1926, 2370
BslI CCNNNNNNNGG 8 cut(s) 1144, 1563, 1790, 1949, 2310, 2498, 2499, 2807
BsmAI GTCTC 5 cut(s) 479, 929, 953, 2173, 2443
BsmFI GGGAC 4 cut(s) 803, 1923, 1926, 2370
BsmI GAATGC 2 cut(s) 1288, 1989
BsnI GGCC 4 cut(s) 427, 1130, 2315, 2507
Bso31I GGTCTC 4 cut(s) 479, 929, 2173, 2443
Bsp1286I GDGCHC 6 cut(s) 67, 118, 305, 1542, 1928, 2290
Bsp1407I TGTACA 2 cut(s) 1188, 2107
Bsp19I CCATGG 1 cut(s) 979
BspACI CCGC 3 cut(s) 1634, 1892, 1931
BspANI GGCC 4 cut(s) 427, 1130, 2315, 2507
BspCNI CTCAG 5 cut(s) 109, 489, 1022, 1915, 2614
BspDI ATCGAT 1 cut(s) 2272
BspFNI CGCG 2 cut(s) 649, 1933
BspLI GGNNCC 8 cut(s) 1330, 1390, 1425, 1795, 2134, 2602, 2671, 2709
BspMAI CTGCAG 1 cut(s) 1255
BspPI GGATC 7 cut(s) 41, 551, 659, 1418, 1431, 1438, 2277
BspQI GCTCTTC 2 cut(s) 27, 1547
BspT107I GGYRCC 3 cut(s) 1388, 2669, 2707
BspTNI GGTCTC 4 cut(s) 479, 929, 2173, 2443
BsrDI GCAATG 1 cut(s) 1818
BsrFI RCCGGY 1 cut(s) 1847
BsrGI TGTACA 2 cut(s) 1188, 2107
BssAI RCCGGY 1 cut(s) 1847
BssECI CCNNGG 6 cut(s) 82, 422, 444, 979, 1087, 1994
BssNI GRCGYC 1 cut(s) 1939
BssT1I CCWWGG 5 cut(s) 422, 444, 979, 1087, 1994
Bst2UI CCWGG 5 cut(s) 84, 577, 758, 1864, 2095
Bst4CI ACNGT 9 cut(s) 194, 218, 297, 307, 541, 603, 1020, 1728, 2104
Bst6I CTCTTC 3 cut(s) 27, 951, 1547
BstACI GRCGYC 1 cut(s) 1939
BstAPI GCANNNNNTGC 1 cut(s) 338
BstAUI TGTACA 2 cut(s) 1188, 2107
BstC8I GCNNGC 2 cut(s) 67, 1413
BstDEI CTNAG 8 cut(s) 96, 476, 1009, 1764, 1902, 1958, 1976, 2622
BstDSI CCRYGG 1 cut(s) 979
BstEII GGTNACC 1 cut(s) 685
BstF5I GGATG 5 cut(s) 971, 1062, 1480, 1548, 2248
BstFNI CGCG 2 cut(s) 649, 1933
BstH2I RGCGCY 2 cut(s) 95, 1527
BstHHI GCGC 6 cut(s) 94, 681, 1526, 1935, 2541, 2832
BstMAI GTCTC 5 cut(s) 479, 929, 953, 2173, 2443
BstMWI GCNNNNNNNGC 9 cut(s) 338, 1932, 2080, 2204, 2213, 2321, 2475, 2547, 2707
BstNI CCWGG 5 cut(s) 84, 577, 758, 1864, 2095
BstNSI RCATGY 2 cut(s) 315, 1480
BstPI GGTNACC 1 cut(s) 685
BstSCI CCNGG 6 cut(s) 82, 575, 756, 906, 1862, 2093
BstSFI CTRYAG 2 cut(s) 1251, 2745
BstSLI GKGCMC 1 cut(s) 305
BstUI CGCG 2 cut(s) 649, 1933
BstV1I GCAGC 3 cut(s) 56, 1757, 2696
BstV2I GAAGAC 4 cut(s) 650, 1600, 1683, 2287
BstX2I RGATCY 5 cut(s) 33, 556, 1012, 1423, 1443
BstYI RGATCY 5 cut(s) 33, 556, 1012, 1423, 1443
Bsu15I ATCGAT 1 cut(s) 2272
Bsu36I CCTNAGG 2 cut(s) 96, 2622
BsuI GTATCC 1 cut(s) 1163
BsuRI GGCC 4 cut(s) 427, 1130, 2315, 2507
BsuTUI ATCGAT 1 cut(s) 2272
BtgI CCRYGG 1 cut(s) 979
BtrI CACGTC 1 cut(s) 988
BtsCI GGATG 5 cut(s) 971, 1062, 1480, 1548, 2248
BtsI GCAGTG 3 cut(s) 1323, 1678, 2825
Cac8I GCNNGC 2 cut(s) 67, 1413
CaiI CAGNNNCTG 2 cut(s) 572, 1790
CfoI GCGC 6 cut(s) 94, 681, 1526, 1935, 2541, 2832
Cfr10I RCCGGY 1 cut(s) 1847
Cfr13I GGNCC 6 cut(s) 11, 976, 2313, 2505, 2601, 2774
ClaI ATCGAT 1 cut(s) 2272
CseI GACGC 2 cut(s) 638, 655
Csp6I GTAC 4 cut(s) 922, 1189, 1474, 2108
CspAI ACCGGT 1 cut(s) 1847
CviQI GTAC 4 cut(s) 922, 1189, 1474, 2108
DdeI CTNAG 8 cut(s) 96, 476, 1009, 1764, 1902, 1958, 1976, 2622
DraI TTTAAA 2 cut(s) 352, 2535
EaeI YGGCCR 1 cut(s) 1128
Eam1104I CTCTTC 3 cut(s) 27, 951, 1547
EarI CTCTTC 3 cut(s) 27, 951, 1547
Ecl136II GAGCTC 3 cut(s) 116, 1540, 2288
Eco130I CCWWGG 5 cut(s) 422, 444, 979, 1087, 1994
Eco147I AGGCCT 1 cut(s) 427
Eco24I GRGCYC 3 cut(s) 118, 1542, 2290
Eco31I GGTCTC 4 cut(s) 479, 929, 2173, 2443
Eco32I GATATC 2 cut(s) 913, 2013
Eco47I GGWCC 4 cut(s) 11, 976, 2601, 2774
Eco53kI GAGCTC 3 cut(s) 116, 1540, 2288
Eco57I CTGAAG 4 cut(s) 8, 1161, 1695, 2659
Eco81I CCTNAGG 2 cut(s) 96, 2622
Eco91I GGTNACC 1 cut(s) 685
EcoICRI GAGCTC 3 cut(s) 116, 1540, 2288
EcoO109I RGGNCCY 2 cut(s) 11, 2601
EcoO65I GGTNACC 1 cut(s) 685
EcoRII CCWGG 5 cut(s) 82, 575, 756, 1862, 2093
EcoRV GATATC 2 cut(s) 913, 2013
EcoT14I CCWWGG 5 cut(s) 422, 444, 979, 1087, 1994
EcoT22I ATGCAT 2 cut(s) 1482, 1991
EcoT38I GRGCYC 3 cut(s) 118, 1542, 2290
ErhI CCWWGG 5 cut(s) 422, 444, 979, 1087, 1994
FaqI GGGAC 4 cut(s) 803, 1923, 1926, 2370
FauNDI CATATG 1 cut(s) 742
FbaI TGATCA 3 cut(s) 430, 814, 885
Fnu4HI GCNGC 4 cut(s) 70, 1746, 1892, 2685
FokI GGATG 5 cut(s) 978, 1069, 1467, 1535, 2235
FriOI GRGCYC 3 cut(s) 118, 1542, 2290
Fsp4HI GCNGC 4 cut(s) 70, 1746, 1892, 2685
FspBI CTAG 3 cut(s) 1449, 2475, 2519
FspI TGCGCA 1 cut(s) 2831
GlaI GCGC 6 cut(s) 93, 680, 1525, 1934, 2540, 2831
GluI GCNGC 4 cut(s) 70, 1746, 1892, 2685
GsaI CCCAGC 2 cut(s) 495, 790
GsuI CTGGAG 5 cut(s) 953, 984, 1812, 2361, 2381
HaeII RGCGCY 2 cut(s) 95, 1527
HaeIII GGCC 4 cut(s) 427, 1130, 2315, 2507
HapII CCGG 2 cut(s) 907, 1848
HgaI GACGC 2 cut(s) 638, 655
HhaI GCGC 6 cut(s) 94, 681, 1526, 1935, 2541, 2832
Hin1I GRCGYC 1 cut(s) 1939
Hin6I GCGC 6 cut(s) 92, 679, 1524, 1933, 2539, 2830
HinP1I GCGC 6 cut(s) 92, 679, 1524, 1933, 2539, 2830
HincII GTYRAC 2 cut(s) 520, 751
HindII GTYRAC 2 cut(s) 520, 751
HindIII AAGCTT 2 cut(s) 1766, 1955
HinfI GANTC 6 cut(s) 226, 569, 698, 1092, 1593, 2527
HpaI GTTAAC 1 cut(s) 520
HpaII CCGG 2 cut(s) 907, 1848
HphI GGTGA 7 cut(s) 145, 260, 391, 641, 995, 1310, 1633
Hpy166II GTNNAC 8 cut(s) 136, 303, 382, 520, 751, 1006, 1899, 2117
Hpy188I TCNGA 8 cut(s) 479, 697, 804, 995, 1012, 1905, 2051, 2069
Hpy8I GTNNAC 8 cut(s) 136, 303, 382, 520, 751, 1006, 1899, 2117
HpyAV CCTTC 9 cut(s) 65, 124, 620, 1113, 1249, 1900, 2590, 2683, 2801
HpyCH4III ACNGT 9 cut(s) 194, 218, 297, 307, 541, 603, 1020, 1728, 2104
HpyCH4IV ACGT 3 cut(s) 987, 1939, 2575
HpyF10VI GCNNNNNNNGC 9 cut(s) 338, 1932, 2080, 2204, 2213, 2321, 2475, 2547, 2707
HpyF3I CTNAG 8 cut(s) 96, 476, 1009, 1764, 1902, 1958, 1976, 2622
HpySE526I ACGT 3 cut(s) 987, 1939, 2575
Hsp92I GRCGYC 1 cut(s) 1939
HspAI GCGC 6 cut(s) 92, 679, 1524, 1933, 2539, 2830
Ksp22I TGATCA 3 cut(s) 430, 814, 885
KspAI GTTAAC 1 cut(s) 520
LguI GCTCTTC 2 cut(s) 27, 1547
LmnI GCTCC 6 cut(s) 57, 113, 121, 698, 1140, 1793
Lsp1109I GCAGC 3 cut(s) 56, 1757, 2696
LweI GCATC 4 cut(s) 788, 1489, 1579, 2020
MaeI CTAG 3 cut(s) 1449, 2475, 2519
MaeII ACGT 3 cut(s) 987, 1939, 2575
MaeIII GTNAC 6 cut(s) 685, 983, 1066, 1850, 2021, 2326
MfeI CAATTG 3 cut(s) 834, 2558, 2866
MflI RGATCY 5 cut(s) 33, 556, 1012, 1423, 1443
MhlI GDGCHC 6 cut(s) 67, 118, 305, 1542, 1928, 2290
MluI ACGCGT 1 cut(s) 647
MmeI TCCRAC 1 cut(s) 2247
Mph1103I ATGCAT 2 cut(s) 1482, 1991
MroXI GAANNNNTTC 1 cut(s) 240
MslI CAYNNNNRTG 3 cut(s) 298, 621, 1646
MspA1I CMGCKG 2 cut(s) 1666, 1894
MspI CCGG 2 cut(s) 907, 1848
MspR9I CCNGG 6 cut(s) 84, 577, 758, 908, 1864, 2095
MunI CAATTG 3 cut(s) 834, 2558, 2866
Mva1269I GAATGC 2 cut(s) 1288, 1989
MvaI CCWGG 5 cut(s) 84, 577, 758, 1864, 2095
MvnI CGCG 2 cut(s) 649, 1933
MwoI GCNNNNNNNGC 9 cut(s) 338, 1932, 2080, 2204, 2213, 2321, 2475, 2547, 2707
NciI CCSGG 1 cut(s) 908
NcoI CCATGG 1 cut(s) 979
NdeI CATATG 1 cut(s) 742
NlaIV GGNNCC 8 cut(s) 1330, 1390, 1425, 1795, 2134, 2602, 2671, 2709
NmuCI GTSAC 3 cut(s) 983, 1066, 2021
NsbI TGCGCA 1 cut(s) 2831
NsiI ATGCAT 2 cut(s) 1482, 1991
NspI RCATGY 2 cut(s) 315, 1480
OliI CACNNNNGTG 2 cut(s) 298, 1646
PceI AGGCCT 1 cut(s) 427
PciSI GCTCTTC 2 cut(s) 27, 1547
PcsI WCGNNNNNNNCGW 1 cut(s) 202
PctI GAATGC 2 cut(s) 1288, 1989
PdmI GAANNNNTTC 1 cut(s) 240
PfeI GAWTC 6 cut(s) 226, 569, 698, 1092, 1593, 2527
PflMI CCANNNNNTGG 2 cut(s) 1790, 2310
PfoI TCCNGGA 1 cut(s) 756
PinAI ACCGGT 1 cut(s) 1847
PkrI GCNGC 4 cut(s) 71, 1747, 1893, 2686
PpuMI RGGWCCY 2 cut(s) 11, 2601
PsiI TTATAA 1 cut(s) 2058
Psp124BI GAGCTC 3 cut(s) 118, 1542, 2290
Psp1406I AACGTT 1 cut(s) 2575
Psp5II RGGWCCY 2 cut(s) 11, 2601
Psp6I CCWGG 5 cut(s) 82, 575, 756, 1862, 2093
PspEI GGTNACC 1 cut(s) 685
PspFI CCCAGC 2 cut(s) 491, 786
PspGI CCWGG 5 cut(s) 82, 575, 756, 1862, 2093
PspN4I GGNNCC 8 cut(s) 1330, 1390, 1425, 1795, 2134, 2602, 2671, 2709
PspPI GGNCC 6 cut(s) 11, 976, 2313, 2505, 2601, 2774
PspPPI RGGWCCY 2 cut(s) 11, 2601
PstI CTGCAG 1 cut(s) 1255
PstNI CAGNNNCTG 2 cut(s) 572, 1790
PsuI RGATCY 5 cut(s) 33, 556, 1012, 1423, 1443
PvuII CAGCTG 1 cut(s) 1666
RsaI GTAC 4 cut(s) 923, 1190, 1475, 2109
RsaNI GTAC 4 cut(s) 922, 1189, 1474, 2108
RseI CAYNNNNRTG 3 cut(s) 298, 621, 1646
SacI GAGCTC 3 cut(s) 118, 1542, 2290
SapI GCTCTTC 2 cut(s) 27, 1547
SatI GCNGC 4 cut(s) 70, 1746, 1892, 2685
Sau96I GGNCC 6 cut(s) 11, 976, 2313, 2505, 2601, 2774
ScrFI CCNGG 6 cut(s) 84, 577, 758, 908, 1864, 2095
SduI GDGCHC 6 cut(s) 67, 118, 305, 1542, 1928, 2290
SfaNI GCATC 4 cut(s) 788, 1489, 1579, 2020
SfcI CTRYAG 2 cut(s) 1251, 2745
SinI GGWCC 4 cut(s) 11, 976, 2601, 2774
SmiMI CAYNNNNRTG 3 cut(s) 298, 621, 1646
SmlI CTYRAG 2 cut(s) 705, 2591
SmoI CTYRAG 2 cut(s) 705, 2591
SseBI AGGCCT 1 cut(s) 427
SsiI CCGC 3 cut(s) 1634, 1892, 1931
SspMI CTAG 3 cut(s) 1449, 2475, 2519
SstI GAGCTC 3 cut(s) 118, 1542, 2290
StuI AGGCCT 1 cut(s) 427
StyD4I CCNGG 6 cut(s) 82, 575, 756, 906, 1862, 2093
StyI CCWWGG 5 cut(s) 422, 444, 979, 1087, 1994
TaaI ACNGT 9 cut(s) 194, 218, 297, 307, 541, 603, 1020, 1728, 2104
TaiI ACGT 3 cut(s) 990, 1942, 2578
TaqI TCGA 1 cut(s) 2272
TatI WGTACW 3 cut(s) 921, 1188, 2107
TauI GCSGC 1 cut(s) 1894
TfiI GAWTC 6 cut(s) 226, 569, 698, 1092, 1593, 2527
TseFI GTSAC 3 cut(s) 983, 1066, 2021
TseI GCWGC 3 cut(s) 69, 1745, 2684
Tsp45I GTSAC 3 cut(s) 983, 1066, 2021
TspDTI ATGAA 9 cut(s) 455, 633, 639, 1231, 1537, 1591, 1600, 1815, 2157
TspGWI ACGGA 3 cut(s) 126, 1172, 2322
Van91I CCANNNNNTGG 2 cut(s) 1790, 2310
VneI GTGCAC 1 cut(s) 301
VpaK11BI GGWCC 4 cut(s) 11, 976, 2601, 2774
XapI RAATTY 4 cut(s) 347, 439, 2307, 2365
XceI RCATGY 2 cut(s) 315, 1480
XcmI CCANNNNNNNNNTGG 2 cut(s) 1339, 1467
XmnI GAANNNNTTC 1 cut(s) 240
XspI CTAG 3 cut(s) 1449, 2475, 2519
ZraI GACGTC 1 cut(s) 1940
Zsp2I ATGCAT 2 cut(s) 1482, 1991
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.