Rorug02G0078400

Lysine methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
6328991 .. 6329287
297 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0078400.1

Sequence Viewer

Length: 297 bp
ATGGATTTGCCGATCTACCTACAGTTTGGATGCCATGAGAATGGGAGGATTCAGAATTGGTGGATTGTGATCGAGGATAGAGGTGGTGAAGAAGAAGAAGAAGATGGGTCAGTGGGCTGGGTCCTTAAAAGTGAAAAAGACAGGGTGAGACAATTGCATCTTCCCCAATTACCTTATCATATCGAAGAGCACAATCTCGTCGTCGCCGACTCCCGTTTAATACTCGTCGGTGGCTGTTATCGTACTAAAGATGGTGGGTATTACGATTTTGATGAATTTCACCAACTTGACTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

98

Amino Acids

11.53

Weight (kDa)

4.64

Isoelectric Point (pI)

66.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 275
AfaI GTAC 1 cut(s) 244
Alw21I GWGCWC 1 cut(s) 192
Alw26I GTCTC 1 cut(s) 142
ApoI RAATTY 1 cut(s) 275
AspS9I GGNCC 1 cut(s) 121
AsuHPI GGTGA 3 cut(s) 98, 157, 272
AvaII GGWCC 1 cut(s) 121
Bbv12I GWGCWC 1 cut(s) 192
BccI CCATC 2 cut(s) 98, 245
BcoDI GTCTC 1 cut(s) 142
BfmI CTRYAG 1 cut(s) 20
Bme18I GGWCC 1 cut(s) 121
BmgT120I GGNCC 1 cut(s) 121
BmiI GGNNCC 1 cut(s) 122
BmsI GCATC 2 cut(s) 20, 166
BsaBI GATNNNNATC 1 cut(s) 68
Bse8I GATNNNNATC 1 cut(s) 68
BseGI GGATG 1 cut(s) 35
BseJI GATNNNNATC 1 cut(s) 68
BseYI CCCAGC 1 cut(s) 117
BsiHKAI GWGCWC 1 cut(s) 192
BsmAI GTCTC 1 cut(s) 142
Bsp1286I GDGCHC 1 cut(s) 192
Bsp143I GATC 2 cut(s) 12, 69
BspLI GGNNCC 1 cut(s) 122
BspQI GCTCTTC 1 cut(s) 180
BssMI GATC 2 cut(s) 12, 69
Bst4CI ACNGT 1 cut(s) 24
Bst6I CTCTTC 1 cut(s) 180
BstF5I GGATG 1 cut(s) 35
BstKTI GATC 2 cut(s) 15, 72
BstMAI GTCTC 1 cut(s) 142
BstMBI GATC 2 cut(s) 12, 69
BstSFI CTRYAG 1 cut(s) 20
BstXI CCANNNNNNTGG 1 cut(s) 41
BtsCI GGATG 1 cut(s) 35
BtsIMutI CAGTG 1 cut(s) 117
Cfr13I GGNCC 1 cut(s) 121
Csp6I GTAC 1 cut(s) 243
CviAII CATG 1 cut(s) 35
CviJI RGCY 2 cut(s) 117, 234
CviKI_1 RGCY 2 cut(s) 117, 234
CviQI GTAC 1 cut(s) 243
DpnI GATC 2 cut(s) 14, 71
DpnII GATC 2 cut(s) 12, 69
Eam1104I CTCTTC 1 cut(s) 180
EarI CTCTTC 1 cut(s) 180
Eco47I GGWCC 1 cut(s) 121
EcoO109I RGGNCCY 1 cut(s) 121
FaeI CATG 1 cut(s) 38
FaiI YATR 2 cut(s) 36, 180
FatI CATG 1 cut(s) 34
FokI GGATG 1 cut(s) 42
GsaI CCCAGC 1 cut(s) 121
Hin1II CATG 1 cut(s) 38
HinfI GANTC 2 cut(s) 49, 209
HphI GGTGA 3 cut(s) 98, 157, 272
Hpy188I TCNGA 1 cut(s) 54
Hpy99I CGWCG 3 cut(s) 203, 206, 230
HpyCH4III ACNGT 1 cut(s) 24
HpyCH4V TGCA 1 cut(s) 157
Hsp92II CATG 1 cut(s) 38
Kzo9I GATC 2 cut(s) 12, 69
LguI GCTCTTC 1 cut(s) 180
LpnPI CCDG 2 cut(s) 103, 127
LweI GCATC 2 cut(s) 20, 166
MalI GATC 2 cut(s) 14, 71
MboI GATC 2 cut(s) 12, 69
MboII GAAGA 7 cut(s) 101, 104, 107, 110, 113, 152, 197
MfeI CAATTG 1 cut(s) 152
MhlI GDGCHC 1 cut(s) 192
MluCI AATT 4 cut(s) 55, 152, 167, 275
MlyI GAGTC 1 cut(s) 203
MnlI CCTC 3 cut(s) 39, 67, 74
MseI TTAA 2 cut(s) 126, 218
MslI CAYNNNNRTG 1 cut(s) 39
MunI CAATTG 1 cut(s) 152
NdeII GATC 2 cut(s) 12, 69
NlaIII CATG 1 cut(s) 38
NlaIV GGNNCC 1 cut(s) 122
PciSI GCTCTTC 1 cut(s) 180
PcsI WCGNNNNNNNCGW 1 cut(s) 204
PfeI GAWTC 1 cut(s) 49
PleI GAGTC 1 cut(s) 203
PpsI GAGTC 1 cut(s) 203
PpuMI RGGWCCY 1 cut(s) 121
Psp5II RGGWCCY 1 cut(s) 121
PspFI CCCAGC 1 cut(s) 117
PspN4I GGNNCC 1 cut(s) 122
PspPI GGNCC 1 cut(s) 121
PspPPI RGGWCCY 1 cut(s) 121
RsaI GTAC 1 cut(s) 244
RsaNI GTAC 1 cut(s) 243
RseI CAYNNNNRTG 1 cut(s) 39
SapI GCTCTTC 1 cut(s) 180
SaqAI TTAA 2 cut(s) 126, 218
Sau3AI GATC 2 cut(s) 12, 69
Sau96I GGNCC 1 cut(s) 121
SchI GAGTC 1 cut(s) 203
SduI GDGCHC 1 cut(s) 192
SetI ASST 3 cut(s) 21, 85, 175
SfaNI GCATC 2 cut(s) 20, 166
SfcI CTRYAG 1 cut(s) 20
SgeI CNNG 7 cut(s) 47, 85, 130, 154, 209, 225, 236
SinI GGWCC 1 cut(s) 121
SmiMI CAYNNNNRTG 1 cut(s) 39
Sse9I AATT 4 cut(s) 55, 152, 167, 275
TaaI ACNGT 1 cut(s) 24
TaqI TCGA 2 cut(s) 72, 183
TasI AATT 4 cut(s) 55, 152, 167, 275
TfiI GAWTC 1 cut(s) 49
Tru1I TTAA 2 cut(s) 126, 218
Tru9I TTAA 2 cut(s) 126, 218
TscAI CASTG 1 cut(s) 117
TspDTI ATGAA 1 cut(s) 288
TspRI CASTG 1 cut(s) 117
VpaK11BI GGWCC 1 cut(s) 121
XapI RAATTY 1 cut(s) 275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.