Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0011509

Physical Location & Seq

Genomic Coordinates Forward (+)

6577804 .. 6579702

Gene Structure 1899 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0081500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGGAACTCTCAAAGAAACCCGTTTTCTTTACAAAAGCCGAACGAGAGCAGCTAGCCCTAGAACGCCGCCAACAAGAAACCCAAGTCACGTATCTCTTCCATTCTCGCTCTTCCTCCAATGATTCAGGCCCAAGAACAGAGCGGGAATCATCGGGGAGGCGGAGCCACCGTGAACGCGACCACTGTAAGAGGAAGCGTGAAGAGGAAGCTAGGGCAAGCCGCCTAGAGAAGGAGCTTGAAGCCATTAAAGAGCAGTATCTAGGTTCCAACAAGCCTAAGAAACGTGTTATTAAACCTAGCGAGAAGTTCCGGTTCTCTTTCGATTGGGAGAACACCGAGGACACTTCTCGTGACATGAACCCCTTGTACCAAAACCCTCACGAGGCCCATCTCTTGTTTGGGAGAGGGCTTCGCGCCGGGATGGACCGGTGCGAGCAGAAGAAGCTGGCTGCCAAGCAAGAAAGGGAGCTTCGGAACAAGGACGGCCTAGTGGAGGAAGTAGTGTATGATTCTTTTGATATGAAGGTGGATCAACATTGGAGTGATAAGAAGCTTGAGGAGATGAATGAGAGGGACTGGAGGATTTTCCGAGAGGACTTCAATATTTCATACAAAGGGTCTAGGATTCCCAGACCTATTAGGAATTGGGATGAGAGTAAATTGAGTAAGGAGTTGCTCGAGGCTGTGAAGAGGGCTGGTTATAAGAAGCCGTCTCCCATTCAGATGGCGGCAATCCCTCTCGGTTTGCAACAGCGTGATGTTATTGGCATTGCAGAGACTGGTTCTGGCAAGACTGCTGCCTTTGTTCTTCCTATGTTAAGTTATATTTCTAGGTTGCCTCCTATTAGTGAAGAGAATGAGGCTGAAGGGCCTTATGCTGTGGTTTTGGCGCCTACCCGCGAGCTTGCGCAGCAGATTGAGAAAGAGACTGTCAAGTTTGCGCATGACTTGGGAATCAAGGTGGTTTCTATTGTTGGTGGGAAGTCGATTGAGGAACAGGGTTTTAAAATCGCACAAGGATGTGAGGTTGTCATTGCCACGCCGGGGCGTTTGATTGATTGTTTGCAGAGGCGTCTTGCTGTTTTGAATCAGTGCAACTATGTAGTTCTTGACGAGGCTGATACGATGATAGATAAGGGACTTGAAGACCAGGTTGTTGGTGTTTTGGATGCAATGCCTTCGAGCAACTTGAAACCTGAGAATGAAGATGAAGAGCTAGATGACAAGAAGATTTACAGAACCACTTATATGTTCAGTGCAACTATGCCTCCTGCTGTGGAGCGACTCGCCCGCAATTACTTGAGGAATCCTGTTGTAGTCACCATTGGCAGTGCCGGAACCACCACTGATTTGATCACTCAGAATGTGGTCATGATCAGCAAGGAGTCGGAAAAGTTTGAAAAGCTAAAGAGATTGCTTGATGAAGTACTTGGTGATCATAAGACTGCTATTGTATTTGCTAATACCAAGAAAAATGTAAATATTCTGGCGAAGAGTTTGAGCAAGAATGGATATCATCATGTGATCACTTTGCATTCGGATTTACAACAATCACAGAGAGACTCTAACCTTGAAGGTTTTAAGACCAAGAGATATAATGTCCTCGTTGCAACAGATGCTGCAGGACGAGGTATTGATGTACCTGATGTGGCACATGTAATTAATTATGAAATGCCACCGAAGATAGAAAAGTATACCCATCGTATTGGACGTACTGGTCGTGCAGGAAAGACTGGTTTAGCCACAACATTCTTGACAATGCAAGACACTGGGGTGTTCTATGATCTCAAGAAGATGCTCATTCAGAGTAACAGTTCTGTTCCTCCTGAACTAGCGAGACATGAAGCCTCAAAGTACAAGCCTGGCACAATTCCTGACAGACCACCCAGGCATAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

632

Amino Acids

72.0

Weight (kDa)

8.87

Isoelectric Point (pI)

44.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DDX23	PF25430	105 - 197	3.2e-21	DDX23-like domain
DEAD	PF00270	238 - 428	4.7e-44	DEAD/DEAH box helicase
Helicase_C	PF00271	465 - 576	7.8e-31	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011509)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g11990 FvH4_1g11990 FvH4_1g11990 FvH4_1g11990 FvH4_1g11990
malus_domestica	MD02G1134000.v1.1 MD15G1247000.v1.1
prunus_persica	Prupe.7G166800_v2.0.a1
pyrus_communis	pycom02g10560 pycom15g21720
rosa_chinensis	RchiOBHm_Chr2g0099611
rosa_laevigata	RLG00000016896
rosa_multiflora	Rmu_sc0005120.1_g000013
rosa_roxburghii	Rroxscaffold_2G00142920
rosa_rugosa	Rorug02G0081500
rosa_samantha	Rh2AG131000 Rh2BG134200 Rh2CG135100 Rh2DG135600
rosa_wichuraiana	Rw2G010110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	702
AasI	GACNNNNNNGTC	1 cut(s)	1716
Acc16I	TGCGCA	2 cut(s)	909, 942
AccB1I	GGYRCC	1 cut(s)	889
AccBSI	CCGCTC	1 cut(s)	142
AccI	GTMKAC	1 cut(s)	1694
AccII	CGCG	3 cut(s)	177, 414, 900
AciI	CCGC	7 cut(s)	67, 142, 160, 220, 728, 898, 1291
AclWI	GGATC	1 cut(s)	537
AcuI	CTGAAG	1 cut(s)	885
AcyI	GRCGYC	2 cut(s)	890, 1072
AfaI	GTAC	5 cut(s)	368, 1428, 1641, 1714, 1856
AfiI	CCNNNNNNNGG	4 cut(s)	229, 382, 493, 1044
AflIII	ACRYGT	2 cut(s)	283, 1654
AgeI	ACCGGT	1 cut(s)	426
AgsI	TTSAA	7 cut(s)	239, 601, 1087, 1145, 1192, 1400, 1574
AjnI	CCWGG	3 cut(s)	1149, 1861, 1886
AleI	CACNNNNGTG	1 cut(s)	1772
AluBI	AGCT	9 cut(s)	52, 209, 235, 445, 469, 553, 904, 1216, 1405
AluI	AGCT	9 cut(s)	52, 209, 235, 445, 469, 553, 904, 1216, 1405
Alw26I	GTCTC	5 cut(s)	717, 770, 920, 1554, 1831
AlwI	GGATC	1 cut(s)	537
AlwNI	CAGNNNCTG	2 cut(s)	779, 1619
Ama87I	CYCGRG	1 cut(s)	677
AoxI	GGCC	4 cut(s)	127, 384, 484, 869
ApeKI	GCWGC	5 cut(s)	49, 449, 797, 910, 1619
AseI	ATTAAT	1 cut(s)	1662
AsiGI	ACCGGT	1 cut(s)	426
AspLEI	GCGC	4 cut(s)	416, 892, 910, 943
AspS9I	GGNCC	4 cut(s)	128, 385, 424, 869
AsuC2I	CCSGG	2 cut(s)	418, 1044
AsuHPI	GGTGA	2 cut(s)	1312, 1445
AsuNHI	GCTAGC	1 cut(s)	52
AvaI	CYCGRG	1 cut(s)	677
AvaII	GGWCC	1 cut(s)	424
BanI	GGYRCC	1 cut(s)	889
BauI	CACGAG	2 cut(s)	348, 380
BbsI	GAAGAC	1 cut(s)	1152
BbvI	GCAGC	5 cut(s)	61, 436, 784, 922, 1606
BccI	CCATC	4 cut(s)	396, 415, 718, 1707
BceAI	ACGGC	2 cut(s)	499, 694
BcgI	CGANNNNNNTGC	2 cut(s)	1161, 1195
BciT130I	CCWGG	3 cut(s)	1151, 1863, 1888
BclI	TGATCA	4 cut(s)	1353, 1374, 1435, 1524
BcnI	CCSGG	2 cut(s)	418, 1044
BcoDI	GTCTC	5 cut(s)	717, 770, 920, 1554, 1831
BfmI	CTRYAG	1 cut(s)	1620
BfoI	RGCGCY	1 cut(s)	893
BisI	GCNGC	8 cut(s)	50, 67, 220, 450, 729, 798, 911, 1620
BlsI	GCNGC	8 cut(s)	51, 68, 221, 451, 730, 799, 912, 1621
BmcAI	AGTACT	1 cut(s)	1428
Bme1390I	CCNGG	5 cut(s)	418, 1044, 1151, 1863, 1888
Bme18I	GGWCC	1 cut(s)	424
BmeT110I	CYCGRG	1 cut(s)	677
BmgT120I	GGNCC	4 cut(s)	128, 385, 424, 869
BmiI	GGNNCC	4 cut(s)	164, 265, 891, 1339
BmrFI	CCNGG	5 cut(s)	418, 1044, 1151, 1863, 1888
BmrI	ACTGGG	1 cut(s)	1779
BmsI	GCATC	3 cut(s)	1159, 1606, 1785
BmtI	GCTAGC	1 cut(s)	56
BmuI	ACTGGG	1 cut(s)	1779
BpiI	GAAGAC	1 cut(s)	1152
BpmI	CTGGAG	1 cut(s)	598
BpuEI	CTTGAG	3 cut(s)	575, 1321, 1772
BpuMI	CCSGG	2 cut(s)	418, 1044
BsaAI	YACGTR	1 cut(s)	90
BsaHI	GRCGYC	2 cut(s)	890, 1072
BsaJI	CCNNGG	3 cut(s)	336, 1043, 1886
BsaWI	WCCGGW	2 cut(s)	309, 426
BsaXI	ACNNNNNCTCC	4 cut(s)	154, 184, 1252, 1282
Bsc4I	CCNNNNNNNGG	4 cut(s)	229, 382, 493, 1044
Bse118I	RCCGGY	1 cut(s)	426
Bse1I	ACTGG	5 cut(s)	581, 784, 1720, 1738, 1774
Bse3DI	GCAATG	3 cut(s)	768, 1032, 1179
BseBI	CCWGG	3 cut(s)	1151, 1863, 1888
BseDI	CCNNGG	3 cut(s)	336, 1043, 1886
BseGI	GGATG	4 cut(s)	426, 655, 1025, 1174
BseLI	CCNNNNNNNGG	4 cut(s)	229, 382, 493, 1044
BseMI	GCAATG	3 cut(s)	768, 1032, 1179
BseMII	CTCAG	2 cut(s)	1188, 1373
BseNI	ACTGG	5 cut(s)	581, 784, 1720, 1738, 1774
BseRI	GAGGAG	1 cut(s)	572
BseXI	GCAGC	5 cut(s)	61, 436, 784, 922, 1606
BsgI	GTGCAG	1 cut(s)	1743
Bsh1236I	CGCG	3 cut(s)	177, 414, 900
BshFI	GGCC	4 cut(s)	129, 386, 486, 871
BshNI	GGYRCC	1 cut(s)	889
BshTI	ACCGGT	1 cut(s)	426
BsiHKCI	CYCGRG	1 cut(s)	677
BsiSI	CCGG	5 cut(s)	310, 417, 427, 1043, 1335
BslFI	GGGAC	2 cut(s)	587, 1152
BslI	CCNNNNNNNGG	4 cut(s)	229, 382, 493, 1044
BsmAI	GTCTC	5 cut(s)	717, 770, 920, 1554, 1831
BsmBI	CGTCTC	1 cut(s)	717
BsmFI	GGGAC	2 cut(s)	587, 1152
BsmI	GAATGC	1 cut(s)	1534
BsnI	GGCC	4 cut(s)	129, 386, 486, 871
BsoBI	CYCGRG	1 cut(s)	677
Bsp143I	GATC	6 cut(s)	529, 1353, 1374, 1435, 1524, 1783
BspACI	CCGC	7 cut(s)	67, 142, 160, 220, 728, 898, 1291
BspANI	GGCC	4 cut(s)	129, 386, 486, 871
BspCNI	CTCAG	2 cut(s)	1189, 1372
BspFNI	CGCG	3 cut(s)	177, 414, 900
BspHI	TCATGA	1 cut(s)	1371
BspLI	GGNNCC	4 cut(s)	164, 265, 891, 1339
BspMAI	CTGCAG	1 cut(s)	1624
BspOI	GCTAGC	1 cut(s)	56
BspPI	GGATC	1 cut(s)	537
BspQI	GCTCTTC	2 cut(s)	115, 1206
BspT107I	GGYRCC	1 cut(s)	889
BsrBI	CCGCTC	1 cut(s)	142
BsrDI	GCAATG	3 cut(s)	768, 1032, 1179
BsrFI	RCCGGY	1 cut(s)	426
BsrI	ACTGG	5 cut(s)	581, 784, 1720, 1738, 1774
BssAI	RCCGGY	1 cut(s)	426
BssECI	CCNNGG	3 cut(s)	336, 1043, 1886
BssMI	GATC	6 cut(s)	529, 1353, 1374, 1435, 1524, 1783
BssNAI	GTATAC	1 cut(s)	1695
BssNI	GRCGYC	2 cut(s)	890, 1072
BssSI	CACGAG	2 cut(s)	348, 380
Bst1107I	GTATAC	1 cut(s)	1695
Bst2BI	CACGAG	2 cut(s)	348, 380
Bst2UI	CCWGG	3 cut(s)	1151, 1863, 1888
Bst4CI	ACNGT	4 cut(s)	170, 185, 931, 1814
Bst6I	CTCTTC	7 cut(s)	101, 115, 195, 683, 846, 1206, 1487
BstACI	GRCGYC	2 cut(s)	890, 1072
BstAPI	GCANNNNNTGC	1 cut(s)	1616
BstBAI	YACGTR	1 cut(s)	90
BstC8I	GCNNGC	7 cut(s)	54, 217, 434, 447, 902, 906, 1291
BstDEI	CTNAG	3 cut(s)	276, 1197, 1359
BstENI	CCTNNNNNAGG	2 cut(s)	227, 491
BstF5I	GGATG	4 cut(s)	426, 655, 1025, 1174
BstFNI	CGCG	3 cut(s)	177, 414, 900
BstH2I	RGCGCY	1 cut(s)	893
BstHHI	GCGC	4 cut(s)	416, 892, 910, 943
BstKTI	GATC	6 cut(s)	532, 1356, 1377, 1438, 1527, 1786
BstMAI	GTCTC	5 cut(s)	717, 770, 920, 1554, 1831
BstMBI	GATC	6 cut(s)	529, 1353, 1374, 1435, 1524, 1783
BstMWI	GCNNNNNNNGC	3 cut(s)	442, 910, 1616
BstNI	CCWGG	3 cut(s)	1151, 1863, 1888
BstNSI	RCATGY	1 cut(s)	1658
BstSCI	CCNGG	5 cut(s)	416, 1042, 1149, 1861, 1886
BstSFI	CTRYAG	1 cut(s)	1620
BstUI	CGCG	3 cut(s)	177, 414, 900
BstV1I	GCAGC	5 cut(s)	61, 436, 784, 922, 1606
BstV2I	GAAGAC	1 cut(s)	1152
BstXI	CCANNNNNNTGG	3 cut(s)	724, 1157, 1706
BstZ17I	GTATAC	1 cut(s)	1695
BsuRI	GGCC	4 cut(s)	129, 386, 486, 871
BtsCI	GGATG	4 cut(s)	426, 655, 1025, 1174
BtsI	GCAGTG	1 cut(s)	1336
BtsIMutI	CAGTG	6 cut(s)	181, 1097, 1261, 1336, 1344, 1767
Cac8I	GCNNGC	7 cut(s)	54, 217, 434, 447, 902, 906, 1291
CaiI	CAGNNNCTG	2 cut(s)	779, 1619
CciI	TCATGA	1 cut(s)	1371
CfoI	GCGC	4 cut(s)	416, 892, 910, 943
Cfr10I	RCCGGY	1 cut(s)	426
Cfr13I	GGNCC	4 cut(s)	128, 385, 424, 869
CseI	GACGC	1 cut(s)	1061
CsiI	ACCWGGT	1 cut(s)	1149
Csp6I	GTAC	5 cut(s)	367, 1427, 1640, 1713, 1855
CspAI	ACCGGT	1 cut(s)	426
CviAII	CATG	6 cut(s)	355, 944, 1372, 1520, 1655, 1841
CviQI	GTAC	5 cut(s)	367, 1427, 1640, 1713, 1855
DdeI	CTNAG	3 cut(s)	276, 1197, 1359
DinI	GGCGCC	1 cut(s)	891
DpnI	GATC	6 cut(s)	531, 1355, 1376, 1437, 1526, 1785
DpnII	GATC	6 cut(s)	529, 1353, 1374, 1435, 1524, 1783
DraI	TTTAAA	1 cut(s)	1006
DrdI	GACNNNNNNGTC	1 cut(s)	1716
DseDI	GACNNNNNNGTC	1 cut(s)	1716
Eam1104I	CTCTTC	7 cut(s)	101, 115, 195, 683, 846, 1206, 1487
EarI	CTCTTC	7 cut(s)	101, 115, 195, 683, 846, 1206, 1487
EciI	GGCGGA	1 cut(s)	175
Eco32I	GATATC	1 cut(s)	1514
Eco47I	GGWCC	1 cut(s)	424
Eco57I	CTGAAG	1 cut(s)	885
Eco88I	CYCGRG	1 cut(s)	677
EcoNI	CCTNNNNNAGG	2 cut(s)	227, 491
EcoO109I	RGGNCCY	1 cut(s)	869
EcoRII	CCWGG	3 cut(s)	1149, 1861, 1886
EcoRV	GATATC	1 cut(s)	1514
EgeI	GGCGCC	1 cut(s)	891
EheI	GGCGCC	1 cut(s)	891
Esp3I	CGTCTC	1 cut(s)	717
FaeI	CATG	6 cut(s)	358, 947, 1375, 1523, 1658, 1844
FaqI	GGGAC	2 cut(s)	587, 1152
FatI	CATG	6 cut(s)	354, 943, 1371, 1519, 1654, 1840
FauI	CCCGC	3 cut(s)	135, 905, 1298
FbaI	TGATCA	4 cut(s)	1353, 1374, 1435, 1524
FblI	GTMKAC	1 cut(s)	1694
Fnu4HI	GCNGC	8 cut(s)	50, 67, 220, 450, 729, 798, 911, 1620
FokI	GGATG	4 cut(s)	433, 662, 1032, 1181
Fsp4HI	GCNGC	8 cut(s)	50, 67, 220, 450, 729, 798, 911, 1620
FspI	TGCGCA	2 cut(s)	909, 942
GlaI	GCGC	4 cut(s)	415, 891, 909, 942
GluI	GCNGC	8 cut(s)	50, 67, 220, 450, 729, 798, 911, 1620
GsuI	CTGGAG	1 cut(s)	598
HaeII	RGCGCY	1 cut(s)	893
HaeIII	GGCC	4 cut(s)	129, 386, 486, 871
HapII	CCGG	5 cut(s)	310, 417, 427, 1043, 1335
HgaI	GACGC	1 cut(s)	1061
HhaI	GCGC	4 cut(s)	416, 892, 910, 943
Hin1I	GRCGYC	2 cut(s)	890, 1072
Hin1II	CATG	6 cut(s)	358, 947, 1375, 1523, 1658, 1844
Hin6I	GCGC	4 cut(s)	414, 890, 908, 941
HinP1I	GCGC	4 cut(s)	414, 890, 908, 941
HindIII	AAGCTT	1 cut(s)	551
HpaII	CCGG	5 cut(s)	310, 417, 427, 1043, 1335
HphI	GGTGA	2 cut(s)	1312, 1445
Hpy166II	GTNNAC	2 cut(s)	173, 1695
Hpy188I	TCNGA	7 cut(s)	474, 590, 723, 1362, 1390, 1540, 1806
Hpy188III	TCNNGA	8 cut(s)	350, 380, 1109, 1372, 1753, 1789, 1826, 1874
Hpy8I	GTNNAC	2 cut(s)	173, 1695
HpyAV	CCTTC	5 cut(s)	223, 517, 860, 1188, 1568
HpyCH4III	ACNGT	4 cut(s)	170, 185, 931, 1814
HpyCH4IV	ACGT	3 cut(s)	89, 283, 1711
HpyF10VI	GCNNNNNNNGC	3 cut(s)	442, 910, 1616
HpyF3I	CTNAG	3 cut(s)	276, 1197, 1359
HpySE526I	ACGT	3 cut(s)	89, 283, 1711
Hsp92I	GRCGYC	2 cut(s)	890, 1072
Hsp92II	CATG	6 cut(s)	358, 947, 1375, 1523, 1658, 1844
HspAI	GCGC	4 cut(s)	414, 890, 908, 941
KasI	GGCGCC	1 cut(s)	889
Ksp22I	TGATCA	4 cut(s)	1353, 1374, 1435, 1524
Kzo9I	GATC	6 cut(s)	529, 1353, 1374, 1435, 1524, 1783
LguI	GCTCTTC	2 cut(s)	115, 1206
LmnI	GCTCC	4 cut(s)	162, 232, 466, 1279
Lsp1109I	GCAGC	5 cut(s)	61, 436, 784, 922, 1606
LweI	GCATC	3 cut(s)	1159, 1606, 1785
MabI	ACCWGGT	1 cut(s)	1149
MaeII	ACGT	3 cut(s)	89, 283, 1711
MaeIII	GTNAC	4 cut(s)	85, 350, 1318, 1808
MalI	GATC	6 cut(s)	531, 1355, 1376, 1437, 1526, 1785
MbiI	CCGCTC	1 cut(s)	142
MboI	GATC	6 cut(s)	529, 1353, 1374, 1435, 1524, 1783
MluCI	AATT	6 cut(s)	643, 659, 1294, 1659, 1663, 1869
Mly113I	GGCGCC	1 cut(s)	890
MlyI	GAGTC	3 cut(s)	1278, 1394, 1556
MmeI	TCCRAC	2 cut(s)	291, 1368
MseI	TTAA	6 cut(s)	246, 291, 818, 1005, 1581, 1662
MslI	CAYNNNNRTG	5 cut(s)	540, 722, 1018, 1247, 1772
MspI	CCGG	5 cut(s)	310, 417, 427, 1043, 1335
MspR9I	CCNGG	5 cut(s)	418, 1044, 1151, 1863, 1888
Mva1269I	GAATGC	1 cut(s)	1534
MvaI	CCWGG	3 cut(s)	1151, 1863, 1888
MvnI	CGCG	3 cut(s)	177, 414, 900
MwoI	GCNNNNNNNGC	3 cut(s)	442, 910, 1616
NarI	GGCGCC	1 cut(s)	890
NciI	CCSGG	2 cut(s)	418, 1044
NdeII	GATC	6 cut(s)	529, 1353, 1374, 1435, 1524, 1783
NheI	GCTAGC	1 cut(s)	52
NlaIII	CATG	6 cut(s)	358, 947, 1375, 1523, 1658, 1844
NlaIV	GGNNCC	4 cut(s)	164, 265, 891, 1339
NmuCI	GTSAC	3 cut(s)	85, 350, 1318
NsbI	TGCGCA	2 cut(s)	909, 942
NspI	RCATGY	1 cut(s)	1658
OliI	CACNNNNGTG	1 cut(s)	1772
PaeR7I	CTCGAG	1 cut(s)	677
PagI	TCATGA	1 cut(s)	1371
PciI	ACATGT	1 cut(s)	1654
PciSI	GCTCTTC	2 cut(s)	115, 1206
PcsI	WCGNNNNNNNCGW	2 cut(s)	1708, 1717
PctI	GAATGC	1 cut(s)	1534
PfeI	GAWTC	7 cut(s)	122, 146, 509, 625, 954, 1087, 1306
PinAI	ACCGGT	1 cut(s)	426
PkrI	GCNGC	8 cut(s)	51, 68, 221, 451, 730, 799, 912, 1621
PleI	GAGTC	3 cut(s)	1278, 1393, 1556
PluTI	GGCGCC	1 cut(s)	893
PpsI	GAGTC	3 cut(s)	1278, 1393, 1556
Ppu21I	YACGTR	1 cut(s)	90
PscI	ACATGT	1 cut(s)	1654
PshBI	ATTAAT	1 cut(s)	1662
PsiI	TTATAA	1 cut(s)	702
Psp6I	CCWGG	3 cut(s)	1149, 1861, 1886
PspGI	CCWGG	3 cut(s)	1149, 1861, 1886
PspN4I	GGNNCC	4 cut(s)	164, 265, 891, 1339
PspPI	GGNCC	4 cut(s)	128, 385, 424, 869
PspXI	VCTCGAGB	1 cut(s)	677
PsrI	GAACNNNNNNTAC	2 cut(s)	350, 382
PstI	CTGCAG	1 cut(s)	1624
PstNI	CAGNNNCTG	2 cut(s)	779, 1619
RsaI	GTAC	5 cut(s)	368, 1428, 1641, 1714, 1856
RsaNI	GTAC	5 cut(s)	367, 1427, 1640, 1713, 1855
RseI	CAYNNNNRTG	5 cut(s)	540, 722, 1018, 1247, 1772
SapI	GCTCTTC	2 cut(s)	115, 1206
SaqAI	TTAA	6 cut(s)	246, 291, 818, 1005, 1581, 1662
SatI	GCNGC	8 cut(s)	50, 67, 220, 450, 729, 798, 911, 1620
Sau3AI	GATC	6 cut(s)	529, 1353, 1374, 1435, 1524, 1783
Sau96I	GGNCC	4 cut(s)	128, 385, 424, 869
ScaI	AGTACT	1 cut(s)	1428
SchI	GAGTC	3 cut(s)	1278, 1394, 1556
ScrFI	CCNGG	5 cut(s)	418, 1044, 1151, 1863, 1888
SexAI	ACCWGGT	1 cut(s)	1149
SfaNI	GCATC	3 cut(s)	1159, 1606, 1785
SfcI	CTRYAG	1 cut(s)	1620
SfoI	GGCGCC	1 cut(s)	891
Sfr274I	CTCGAG	1 cut(s)	677
SinI	GGWCC	1 cut(s)	424
SlaI	CTCGAG	1 cut(s)	677
SmiMI	CAYNNNNRTG	5 cut(s)	540, 722, 1018, 1247, 1772
SmlI	CTYRAG	4 cut(s)	554, 677, 1300, 1787
SmoI	CTYRAG	4 cut(s)	554, 677, 1300, 1787
Sse9I	AATT	6 cut(s)	643, 659, 1294, 1659, 1663, 1869
SsiI	CCGC	7 cut(s)	67, 142, 160, 220, 728, 898, 1291
SspDI	GGCGCC	1 cut(s)	889
SspI	AATATT	2 cut(s)	604, 1483
StyD4I	CCNGG	5 cut(s)	416, 1042, 1149, 1861, 1886
TaaI	ACNGT	4 cut(s)	170, 185, 931, 1814
TaiI	ACGT	3 cut(s)	92, 286, 1714
TaqI	TCGA	4 cut(s)	321, 678, 986, 1181
TasI	AATT	6 cut(s)	643, 659, 1294, 1659, 1663, 1869
TatI	WGTACW	2 cut(s)	1426, 1854
TauI	GCSGC	3 cut(s)	69, 222, 731
TfiI	GAWTC	7 cut(s)	122, 146, 509, 625, 954, 1087, 1306
Tru1I	TTAA	6 cut(s)	246, 291, 818, 1005, 1581, 1662
Tru9I	TTAA	6 cut(s)	246, 291, 818, 1005, 1581, 1662
TscAI	CASTG	6 cut(s)	188, 1097, 1261, 1336, 1351, 1774
TseFI	GTSAC	3 cut(s)	85, 350, 1318
TseI	GCWGC	5 cut(s)	49, 449, 797, 910, 1619
Tsp45I	GTSAC	3 cut(s)	85, 350, 1318
TspDTI	ATGAA	9 cut(s)	371, 536, 578, 597, 1218, 1224, 1437, 1683, 1857
TspRI	CASTG	6 cut(s)	188, 1097, 1261, 1336, 1351, 1774
VpaK11BI	GGWCC	1 cut(s)	424
VspI	ATTAAT	1 cut(s)	1662
XagI	CCTNNNNNAGG	2 cut(s)	227, 491
XceI	RCATGY	1 cut(s)	1658
XcmI	CCANNNNNNNNNTGG	1 cut(s)	395
XhoI	CTCGAG	1 cut(s)	677
XmiI	GTMKAC	1 cut(s)	1694
ZrmI	AGTACT	1 cut(s)	1428

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.