Rorug02G0171100

Protein SGT1 homolog At5g65490-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
15454569 .. 15460919
6351 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0171100.1

Sequence Viewer

Length: 4218 bp
ATGCTTCCGCCCTCGAGTTTTCACCGTGCGAGCGAGGGCAGTCTCGTCATTTCAAGCCGGTTCAGTGGCATTTCTTTTGTAAAAGCTCCGTGTGTGTGGTTATGTTGGCTCTGTGAGAAGGCCATTCATTCGCTGCTAATATCATCAGGTGGTGGTCTTCTGGTGTCGCTGTGCTTCAGCTCTAAGCAAAAGCCTCTCGAAATCGAGCCCGAAACGCAGCGTTTAAGGTCCATCGGAACCTCGCATGGTTCAGCCATGGAGCTCAAAACCCTAACAATCACACCATCTCCGAAGCACCACCAGCACCTCTCTCTCTTCCGCCACAGGGGATTGCCAGTTTCAACCAAAGCAGTCCTGGTTCTTGTGGTTTTAGCATGTACCCTTTTCTGCTTGGCGACATGTGAAAGCTCTGGTGATGGGTTGCACAAATTACTAGAAAATGATGACTGTGGCTCATATGGAGATAACTTTGATGTAGCTCGTGCAGATAGTTTTCTTAGTGATACCCCCTCGGGCTGTGGAATGCAAAAAGGCCACTTCAACACTGAGAGTGTTTGTTCGAGTTCTCTTTCATTCTGCTTTCCGTCAACATTACCCGGTTTTTGGGAGCATAAGCTCAAACTTGCTGATTTAGAAGTTTCTGGGAGTCAGTCTGATCATCTATCATCTGAGAACAGCAATTTGGCAAGTAACAAAAGCTGGTCATCAGATAACGGTATGTTTAAGTTATTTAATGGGGGGATAGTTTCTTGTTCTTTGATCTCCAAAGAGGCTGCTAATGAGTTTTCATCCATTCAAACCGGTAGTGCTAATCAAAATGATCTTTCTTCCTGTAGAGGGCCTTTGCTCTATCAGAAAAGCACAAGTTATAGGTCAGACAAGACCACTGAGATGACCAAATCTAATTCTTTTGGTGGTTCTTCCTCACCCCATGTAGAAATTACCCCTGCTGTGTTAGATTGGGGGCAAAAGTATATGTATTTTCCTTCCTTAGCTTTCTTAACTGTGGCAAATACATGCAATGACAGCATTTTACATGTTTATGAGCCATTCAGTTCCGACATACAGTTCTATCCTTGCAATTTTAGTGAGGCTGTGTTAGGACCTGGTGAAATAGCTTCAATTTGTTTTGTGTTCTTACCTAGATGGTTGGGCCCATCCTTTGCTCAAATCATTTTGCAGACAAGTTTTGGTGGTTTCTTGATTCAGGCTAAAGGATTTTCCATTGAGTCCCCTTATGGAATTCACCCTTTATCAGGCCCGGATGTTTCTTCTAGGGGAAGGTGGAGTAAGAATCTGTCCTTGTTTAATTCCTTTGATCAACATTTCCATGTGGAGGAAGTAACTGCATGGATATCAGTGTCTCTAGAGCATACTTCCCATATTGCAGAGGCAGCATGTAGCACCAGAAGAGATCAAGGTTTGAATGAGCCTGGTGTACCGAATGTTAAAGATCGTCTTGTTGTGCGTACTGGTCAGGTTGGTTTGCCTCTGCTGGCAATGAGGCCCCTTAGGAACTGGGAGATTGGTCCCCACAGCAGTGAAACCATCATAGAAATAGACTTCTCAATTGAATCTAAAGGAAAGATTTTTGGTGCAATTTGTATGCAGTTGCTAAGATCTTCACAGGACAAGGCTGATACTATTATGCTTCCTTTTGAAGCTGAATTAGACGGAACGGCAATGAATGATGATCTTGCAGGACCTATCATAGCATCTCTTGAGGTCTTACACCCATGGGCTGGCAATGAAGCTGTTGTTGCTATATCTCTGAAAAACTGTGCGCCTTATATTCTGAGAGTTCTTGAAATAACTGAGATTGCAGATAGCAAAATCTTCCAGATCAAGTACAATGAGGGCCTACTGCTTTTCCCTGGCACTGACACATATGTAGCCATAGTTACTTGTACTCACCTGCATGTTGAAGATGGACAGTGTAAATTACTTATACTGACAAATGACTCGAGCAGCTCACAGATTGAAGTTCCTTGCGAGGATGTTGTCCAAATTTGTTCTAGACACTGGAAAGATTCCACTGTTGAATATGAACATCAGTCTGAACGGAGCGAATCTGGTGATTTGAAGACGGTGTTTTCTGACAGTAGCATGCAGCTTCCATCACAAACCATGGCAATGGATACAGCAGGGGAAGCAGATGAATTGGTGCTACGAAACTGGAAATCTCAAGATACCAGAAGTGGCATGTCTGTGCTTGATGATCATGAGGTATTGTTCCCAATGCTTCAGGTGGGAAGTCATTATTCTAAGTGGATCAATGTAAAGAATCCTAGCCAAGAGCCGGTTGTAATGCAGCTTGTACTAAACTCAGGAGAGATTATTGATCAATGCAAGAGCCCAGATGGTCTTATACAGCCTCCTTCATCTGGTAGTTTGGTTTGTGAAAAATCTCCTTTTCCGAGTAGGTATGGGTTCTCAATAGCAGAAAGTGCATTGACGGAAGCTTTTGTCCTTCCTAATGGTAGAGCATCTCTTGGACCATTATTGTTTCAACCTTCAAATCGATGTGAGTGGAGGAGTTCAGCCTTGATAAGAAACAATCTATCTGGTGTGGAGTGGTTACCTCTGAGGGGCATTGGAGGGTCACTTTCTTTGCTGCTGCTTGAAGAATCTCAGCCTATTCAGAGTGTAGAGTTCAACCTCAGCTTGCCAATTCCTCTCAACATTTCTTCCCCAGACATGTTACTTCATGTGGAAGATACCACTCGTTCTTGTTTACAGCCATTGTCAAAAGAACTCTATGCGAAGAATACTGGGGACTTGCCACTGGAAGTTACAAGAATCAAAGTGTCCGGAAAAGAGTGCAGGATGGATGGGTTTATGGTACAGCCTTGCAAAGGTTTTTCTCTCCAACCTGGAGAATCAGCAAAGCTTCTAATATCATACCAGACTGATTTTTCTGCACCATTGGTACAAAGAGATCTTGAGCTGGCCTTGGCAACTGGTATTCTTGTGATACCCATGAAGGCAAACCTGCCGTTGTATATGCTCAATACATGCAGGAAATCAGTGTTCTGGACGCTCATTAAAAAATACTCTGCGGCGGTTTTTTTTGTCGGCTCCTTGATGTTTCTTGTACTGTGGTATATATTCTCCCAGGTGTTCGTCCTTTCCTCCCATGATTGTTTGTGCGCGAGCAGAAAAAGTTCCTTGGATACTTCTACAAGTGCGGCAGGAAAATCATGTGATGTGCATAGCTATAGAAACAGTAAATTTTCTGTGTCCAGTGAAACAAATAGCTTGTTAAGATCATTTCGGGAAGATAGAACCTTGATGCAGGCATCTGTAGGTGGATATCCTCATAAGCAGGCAGAGACCTTAGACCAGGAAAAGTCTGATCATCATGCTAAACAAAGACTACAAGTTCCTAAACAAACACATGATTTGTCAGATACACCAAAGAATAAAGGGACGGCCTTCTCACTGACATCTGAATCTGCATTACTTGAGAATTCTGATGAACTAGAAGCTTCCGAATTGGGTAACCTTACTGTTAAAACTGGAAAGGAAAAGGGAAGAAGGCGTAGGAAGAGAAAGAGCACTGGTTCCAAATTAGCAGGACTTCTTGAACTTTCAAGTAGTCAGAGTGGAAATTCTACTCCTTCATCACCATTGTCTCCAGTCACATCTGTAATACCAAAGCAGACGTGGCAGCTATCTCCTGATGCGGGCCAAGTGGTTGAGGCTAGGAATCCTTTTACTCATGCAGCTCACCAACGCTGTCAGAAGAGTCATGTTTTTAAATCTGCTTCGAAGGCAAACTTATCAGAGCCTGGGGTTTCTTTGAAGTATTGCAATAGCCACCCAACTTTTCCTTCTCAAGAGCAGCCTTCAGCCCCAAGAGAAACTCTGGCAAGACCTGTTTTGTTGCCTTCTGCCACCTTTCCTTGTGCCGGCAGGCCTACACCTATTATGGGAAGCTCAGCTATTTCTCCACATGCTAGAGCCCCTGGGTCCAAACTCAATGACCGGAAAAATGTCAGAGCAGAAGAAAAAACTCGGCGTGGGGATGAATATACATATGATATCTGGGGTGATCACTTTCCTAGGCTTAATTTGTTGGGTAGGTCAAAGGATACCAATTCTCTGAGCTCCAGCAATACAGAGAGTGACCCTGATAGCTTCTTTGTAAAGGGCCCACAAACCCTCATGACAAACTCTCCACCAAGATCTGTAAGTTATTTCCATCAAGAGGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1405

Amino Acids

154.04

Weight (kDa)

6.23

Isoelectric Point (pI)

48.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TMEM131_like_N PF12371 312 - 395 3.4e-23 Transmembrane protein 131-like N-terminal
DUF7579 PF24474 569 - 675 1.4e-40 Domain of unknown function (DUF7579)
Ig_TMEM131L_5 PF24501 923 - 988 1.4e-23 TMEM131L fifth Ig-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1923
Acc36I ACCTGC 2 cut(s) 1923, 3000
AccB7I CCANNNNNTGG 1 cut(s) 1742
AccII CGCG 1 cut(s) 3152
AccIII TCCGGA 1 cut(s) 2810
AciI CCGC 6 cut(s) 8, 319, 3059, 3062, 3188, 3686
AclWI GGATC 1 cut(s) 2279
AcsI RAATTY 5 cut(s) 1242, 2007, 3230, 3469, 3610
AcuI CTGAAG 3 cut(s) 160, 2228, 3834
AfaI GTAC 9 cut(s) 379, 1440, 1471, 1850, 1909, 2319, 2844, 2931, 3096
AflIII ACRYGT 3 cut(s) 398, 1036, 2697
AgeI ACCGGT 1 cut(s) 800
AjiI CACGTC 1 cut(s) 3666
AjnI CCWGG 9 cut(s) 354, 1105, 1432, 1873, 2872, 3114, 3342, 3790, 3967
AjuI GAANNNNNNNTTGG 4 cut(s) 665, 697, 3817, 3849
AleI CACNNNNGTG 1 cut(s) 1539
Alw21I GWGCWC 3 cut(s) 264, 3560, 4112
Alw26I GTCTC 4 cut(s) 47, 1368, 3326, 3639
AlwI GGATC 1 cut(s) 2279
AlwNI CAGNNNCTG 1 cut(s) 3791
Ama87I CYCGRG 3 cut(s) 13, 511, 1963
Aor13HI TCCGGA 1 cut(s) 2810
ApaI GGGCCC 2 cut(s) 1157, 4157
ApoI RAATTY 5 cut(s) 1242, 2007, 3230, 3469, 3610
AsiGI ACCGGT 1 cut(s) 800
Asp700I GAANNNNTTC 1 cut(s) 3163
AspA2I CCTAGG 1 cut(s) 4064
AspLEI GCGC 2 cut(s) 1786, 3152
AsuC2I CCSGG 2 cut(s) 597, 1262
AsuII TTCGAA 1 cut(s) 3770
AvaI CYCGRG 3 cut(s) 13, 511, 1963
AvaII GGWCC 6 cut(s) 228, 1103, 1529, 1703, 2495, 3972
AvrII CCTAGG 1 cut(s) 4064
AxyI CCTNAGG 1 cut(s) 1511
BaeGI GKGCMC 2 cut(s) 1157, 4157
BanII GRGCYC 7 cut(s) 210, 264, 1157, 2357, 3967, 4112, 4157
BauI CACGAG 1 cut(s) 480
BbsI GAAGAC 2 cut(s) 149, 2090
Bbv12I GWGCWC 3 cut(s) 264, 3560, 4112
BbvCI CCTCAGC 1 cut(s) 2660
BceAI ACGGC 3 cut(s) 1695, 2980, 3447
BciT130I CCWGG 9 cut(s) 356, 1107, 1434, 1875, 2874, 3116, 3344, 3792, 3969
BciVI GTATCC 3 cut(s) 2131, 3166, 4087
BclI TGATCA 6 cut(s) 655, 1318, 2218, 2341, 3355, 4054
BcnI CCSGG 2 cut(s) 597, 1262
BcoDI GTCTC 4 cut(s) 47, 1368, 3326, 3639
BfmI CTRYAG 3 cut(s) 832, 3217, 3303
BfuAI ACCTGC 2 cut(s) 1923, 3000
BfuI GTATCC 3 cut(s) 2131, 3166, 4087
BglII AGATCT 3 cut(s) 1619, 2938, 4187
BlnI CCTAGG 1 cut(s) 4064
BlpI GCTNAGC 1 cut(s) 3940
Bme18I GGWCC 6 cut(s) 228, 1103, 1529, 1703, 2495, 3972
BmeT110I CYCGRG 3 cut(s) 13, 511, 1963
BmgBI CACGTC 1 cut(s) 3666
BmiI GGNNCC 8 cut(s) 238, 1155, 1508, 1531, 3079, 3565, 3973, 4155
BmrI ACTGGG 2 cut(s) 1528, 2781
BmsI GCATC 5 cut(s) 1724, 2495, 3282, 3308, 3673
BmuI ACTGGG 2 cut(s) 1528, 2781
BpiI GAAGAC 2 cut(s) 149, 2090
BpmI CTGGAG 3 cut(s) 2895, 3621, 4096
Bpu10I CCTNAGC 2 cut(s) 991, 2660
Bpu1102I GCTNAGC 1 cut(s) 3940
Bpu14I TTCGAA 1 cut(s) 3770
BpuEI CTTGAG 5 cut(s) 1742, 2169, 2963, 3485, 3822
BpuMI CCSGG 2 cut(s) 597, 1262
Bsa29I ATCGAT 1 cut(s) 2521
BsaI GGTCTC 1 cut(s) 3326
BsaWI WCCGGW 3 cut(s) 800, 2810, 3987
BsaXI ACNNNNNCTCC 4 cut(s) 271, 301, 4162, 4192
Bse118I RCCGGY 4 cut(s) 57, 800, 2299, 3911
Bse21I CCTNAGG 1 cut(s) 1511
Bse3DI GCAATG 5 cut(s) 1027, 1506, 1689, 1753, 2139
BseAI TCCGGA 1 cut(s) 2810
BseBI CCWGG 9 cut(s) 356, 1107, 1434, 1875, 2874, 3116, 3344, 3792, 3969
BseCI ATCGAT 1 cut(s) 2521
BseGI GGATG 7 cut(s) 788, 1157, 1270, 2002, 2832, 2836, 4033
BseMI GCAATG 5 cut(s) 1027, 1506, 1689, 1753, 2139
BseRI GAGGAG 1 cut(s) 2548
BseSI GKGCMC 2 cut(s) 1157, 4157
BsgI GTGCAG 3 cut(s) 504, 2842, 2904
Bsh1236I CGCG 1 cut(s) 3152
BshTI ACCGGT 1 cut(s) 800
BshVI ATCGAT 1 cut(s) 2521
BsiHKAI GWGCWC 3 cut(s) 264, 3560, 4112
BsiHKCI CYCGRG 3 cut(s) 13, 511, 1963
BsiSI CCGG 8 cut(s) 58, 597, 801, 1262, 2300, 2811, 3912, 3988
BslFI GGGAC 4 cut(s) 1216, 1515, 2789, 3442
BsmAI GTCTC 4 cut(s) 47, 1368, 3326, 3639
BsmFI GGGAC 4 cut(s) 1216, 1515, 2789, 3442
BsmI GAATGC 1 cut(s) 528
Bso31I GGTCTC 1 cut(s) 3326
BsoBI CYCGRG 3 cut(s) 13, 511, 1963
Bsp119I TTCGAA 1 cut(s) 3770
Bsp120I GGGCCC 2 cut(s) 1153, 4153
Bsp1286I GDGCHC 8 cut(s) 210, 264, 1157, 2357, 3560, 3967, 4112, 4157
Bsp13I TCCGGA 1 cut(s) 2810
Bsp1720I GCTNAGC 1 cut(s) 3940
Bsp19I CCATGG 3 cut(s) 255, 1736, 2127
BspACI CCGC 6 cut(s) 8, 319, 3059, 3062, 3188, 3686
BspDI ATCGAT 1 cut(s) 2521
BspEI TCCGGA 1 cut(s) 2810
BspFNI CGCG 1 cut(s) 3152
BspHI TCATGA 2 cut(s) 2221, 4167
BspLI GGNNCC 8 cut(s) 238, 1155, 1508, 1531, 3079, 3565, 3973, 4155
BspMI ACCTGC 2 cut(s) 1923, 3000
BspPI GGATC 1 cut(s) 2279
BspT104I TTCGAA 1 cut(s) 3770
BspTNI GGTCTC 1 cut(s) 3326
BsrDI GCAATG 5 cut(s) 1027, 1506, 1689, 1753, 2139
BsrFI RCCGGY 4 cut(s) 57, 800, 2299, 3911
BssAI RCCGGY 4 cut(s) 57, 800, 2299, 3911
BssSI CACGAG 1 cut(s) 480
BssT1I CCWWGG 6 cut(s) 255, 1736, 2127, 2952, 3168, 4064
Bst2BI CACGAG 1 cut(s) 480
Bst2UI CCWGG 9 cut(s) 356, 1107, 1434, 1875, 2874, 3116, 3344, 3792, 3969
Bst6I CTCTTC 4 cut(s) 320, 1405, 3542, 3740
BstAPI GCANNNNNTGC 1 cut(s) 2447
BstBI TTCGAA 1 cut(s) 3770
BstDSI CCRYGG 3 cut(s) 255, 1736, 2127
BstEII GGTNACC 2 cut(s) 2577, 3500
BstENI CCTNNNNNAGG 2 cut(s) 1254, 2853
BstF5I GGATG 7 cut(s) 788, 1157, 1270, 2002, 2832, 2836, 4033
BstFNI CGCG 1 cut(s) 3152
BstHHI GCGC 2 cut(s) 1786, 3152
BstMAI GTCTC 4 cut(s) 47, 1368, 3326, 3639
BstMWI GCNNNNNNNGC 9 cut(s) 214, 301, 1026, 1394, 1760, 2150, 2447, 3667, 3773
BstNI CCWGG 9 cut(s) 356, 1107, 1434, 1875, 2874, 3116, 3344, 3792, 3969
BstPI GGTNACC 2 cut(s) 2577, 3500
BstSFI CTRYAG 3 cut(s) 832, 3217, 3303
BstSLI GKGCMC 2 cut(s) 1157, 4157
BstUI CGCG 1 cut(s) 3152
BstV2I GAAGAC 2 cut(s) 149, 2090
BstX2I RGATCY 3 cut(s) 1619, 2938, 4187
BstXI CCANNNNNNTGG 1 cut(s) 2134
BstYI RGATCY 3 cut(s) 1619, 2938, 4187
Bsu15I ATCGAT 1 cut(s) 2521
Bsu36I CCTNAGG 1 cut(s) 1511
BsuI GTATCC 3 cut(s) 2131, 3166, 4087
BsuTUI ATCGAT 1 cut(s) 2521
BtgI CCRYGG 3 cut(s) 255, 1736, 2127
BtrI CACGTC 1 cut(s) 3666
BtsCI GGATG 7 cut(s) 788, 1157, 1270, 2002, 2832, 2836, 4033
BtsI GCAGTG 1 cut(s) 1546
BveI ACCTGC 2 cut(s) 1923, 3000
CaiI CAGNNNCTG 1 cut(s) 3791
CciI TCATGA 2 cut(s) 2221, 4167
CfoI GCGC 2 cut(s) 1786, 3152
Cfr10I RCCGGY 4 cut(s) 57, 800, 2299, 3911
ClaI ATCGAT 1 cut(s) 2521
CseI GACGC 1 cut(s) 3046
CsiI ACCWGGT 1 cut(s) 1105
Csp6I GTAC 9 cut(s) 378, 1439, 1470, 1849, 1908, 2318, 2843, 2930, 3095
CspAI ACCGGT 1 cut(s) 800
CviQI GTAC 9 cut(s) 378, 1439, 1470, 1849, 1908, 2318, 2843, 2930, 3095
DraI TTTAAA 1 cut(s) 3760
Eam1104I CTCTTC 4 cut(s) 320, 1405, 3542, 3740
EarI CTCTTC 4 cut(s) 320, 1405, 3542, 3740
EciI GGCGGA 1 cut(s) 308
Ecl136II GAGCTC 2 cut(s) 262, 4110
Eco130I CCWWGG 6 cut(s) 255, 1736, 2127, 2952, 3168, 4064
Eco147I AGGCCT 1 cut(s) 3919
Eco24I GRGCYC 7 cut(s) 210, 264, 1157, 2357, 3967, 4112, 4157
Eco31I GGTCTC 1 cut(s) 3326
Eco32I GATATC 3 cut(s) 1356, 3314, 4045
Eco47I GGWCC 6 cut(s) 228, 1103, 1529, 1703, 2495, 3972
Eco53kI GAGCTC 2 cut(s) 262, 4110
Eco57I CTGAAG 3 cut(s) 160, 2228, 3834
Eco81I CCTNAGG 1 cut(s) 1511
Eco88I CYCGRG 3 cut(s) 13, 511, 1963
Eco91I GGTNACC 2 cut(s) 2577, 3500
EcoICRI GAGCTC 2 cut(s) 262, 4110
EcoNI CCTNNNNNAGG 2 cut(s) 1254, 2853
EcoO109I RGGNCCY 6 cut(s) 839, 1103, 1506, 1703, 1858, 4153
EcoO65I GGTNACC 2 cut(s) 2577, 3500
EcoRI GAATTC 2 cut(s) 1242, 3469
EcoRII CCWGG 9 cut(s) 354, 1105, 1432, 1873, 2872, 3114, 3342, 3790, 3967
EcoRV GATATC 3 cut(s) 1356, 3314, 4045
EcoT14I CCWWGG 6 cut(s) 255, 1736, 2127, 2952, 3168, 4064
EcoT38I GRGCYC 7 cut(s) 210, 264, 1157, 2357, 3967, 4112, 4157
ErhI CCWWGG 6 cut(s) 255, 1736, 2127, 2952, 3168, 4064
FalI AAGNNNNNCTT 4 cut(s) 1443, 1475, 3764, 3796
FaqI GGGAC 4 cut(s) 1216, 1515, 2789, 3442
FauI CCCGC 1 cut(s) 3679
FauNDI CATATG 3 cut(s) 457, 1888, 4039
FbaI TGATCA 6 cut(s) 655, 1318, 2218, 2341, 3355, 4054
FokI GGATG 7 cut(s) 775, 1144, 1277, 2009, 2839, 2843, 4040
FriOI GRGCYC 7 cut(s) 210, 264, 1157, 2357, 3967, 4112, 4157
GlaI GCGC 2 cut(s) 1785, 3151
GsuI CTGGAG 3 cut(s) 2895, 3621, 4096
HapII CCGG 8 cut(s) 58, 597, 801, 1262, 2300, 2811, 3912, 3988
HgaI GACGC 1 cut(s) 3046
HhaI GCGC 2 cut(s) 1786, 3152
Hin6I GCGC 2 cut(s) 1784, 3150
HinP1I GCGC 2 cut(s) 1784, 3150
HincII GTYRAC 1 cut(s) 588
HindII GTYRAC 1 cut(s) 588
HindIII AAGCTT 3 cut(s) 2460, 2888, 3486
HpaII CCGG 8 cut(s) 58, 597, 801, 1262, 2300, 2811, 3912, 3988
Hpy166II GTNNAC 3 cut(s) 588, 1439, 2735
Hpy8I GTNNAC 3 cut(s) 588, 1439, 2735
HpyCH4IV ACGT 1 cut(s) 3665
HpyF10VI GCNNNNNNNGC 9 cut(s) 214, 301, 1026, 1394, 1760, 2150, 2447, 3667, 3773
HpySE526I ACGT 1 cut(s) 3665
HspAI GCGC 2 cut(s) 1784, 3150
Kpn2I TCCGGA 1 cut(s) 2810
KroI GCCGGC 1 cut(s) 3911
KroNI GCCGGC 1 cut(s) 3913
Ksp22I TGATCA 6 cut(s) 655, 1318, 2218, 2341, 3355, 4054
LmnI GCTCC 6 cut(s) 91, 259, 607, 2064, 3083, 4115
LweI GCATC 5 cut(s) 1724, 2495, 3282, 3308, 3673
MabI ACCWGGT 1 cut(s) 1105
MaeII ACGT 1 cut(s) 3665
MfeI CAATTG 1 cut(s) 1569
MflI RGATCY 3 cut(s) 1619, 2938, 4187
MhlI GDGCHC 8 cut(s) 210, 264, 1157, 2357, 3560, 3967, 4112, 4157
MlyI GAGTC 4 cut(s) 655, 1238, 1955, 3757
MmeI TCCRAC 2 cut(s) 1083, 2893
MroI TCCGGA 1 cut(s) 2810
MroNI GCCGGC 1 cut(s) 3911
MroXI GAANNNNTTC 1 cut(s) 3163
MslI CAYNNNNRTG 7 cut(s) 890, 1041, 1329, 1539, 1917, 2132, 2207
MspI CCGG 8 cut(s) 58, 597, 801, 1262, 2300, 2811, 3912, 3988
MunI CAATTG 1 cut(s) 1569
Mva1269I GAATGC 1 cut(s) 528
MvaI CCWGG 9 cut(s) 356, 1107, 1434, 1875, 2874, 3116, 3344, 3792, 3969
MvnI CGCG 1 cut(s) 3152
MwoI GCNNNNNNNGC 9 cut(s) 214, 301, 1026, 1394, 1760, 2150, 2447, 3667, 3773
NaeI GCCGGC 1 cut(s) 3913
NciI CCSGG 2 cut(s) 597, 1262
NcoI CCATGG 3 cut(s) 255, 1736, 2127
NdeI CATATG 3 cut(s) 457, 1888, 4039
NgoMIV GCCGGC 1 cut(s) 3911
NlaIV GGNNCC 8 cut(s) 238, 1155, 1508, 1531, 3079, 3565, 3973, 4155
NmeAIII GCCGAG 1 cut(s) 3997
NmuCI GTSAC 3 cut(s) 2601, 3640, 4127
NspV TTCGAA 1 cut(s) 3770
OliI CACNNNNGTG 1 cut(s) 1539
PaeI GCATGC 1 cut(s) 2110
PaeR7I CTCGAG 2 cut(s) 13, 1963
PagI TCATGA 2 cut(s) 2221, 4167
PaqCI CACCTGC 1 cut(s) 1923
PasI CCCWGGG 1 cut(s) 3968
PceI AGGCCT 1 cut(s) 3919
PciI ACATGT 3 cut(s) 398, 1036, 2697
PctI GAATGC 1 cut(s) 528
PdiI GCCGGC 1 cut(s) 3913
PdmI GAANNNNTTC 1 cut(s) 3163
PflMI CCANNNNNTGG 1 cut(s) 1742
PinAI ACCGGT 1 cut(s) 800
PleI GAGTC 4 cut(s) 654, 1237, 1955, 3756
PpsI GAGTC 4 cut(s) 654, 1237, 1955, 3756
PpuMI RGGWCCY 2 cut(s) 1103, 1703
PscI ACATGT 3 cut(s) 398, 1036, 2697
Psp124BI GAGCTC 2 cut(s) 264, 4112
Psp5II RGGWCCY 2 cut(s) 1103, 1703
Psp6I CCWGG 9 cut(s) 354, 1105, 1432, 1873, 2872, 3114, 3342, 3790, 3967
PspEI GGTNACC 2 cut(s) 2577, 3500
PspGI CCWGG 9 cut(s) 354, 1105, 1432, 1873, 2872, 3114, 3342, 3790, 3967
PspN4I GGNNCC 8 cut(s) 238, 1155, 1508, 1531, 3079, 3565, 3973, 4155
PspOMI GGGCCC 2 cut(s) 1153, 4153
PspPPI RGGWCCY 2 cut(s) 1103, 1703
PspXI VCTCGAGB 2 cut(s) 13, 1963
PstNI CAGNNNCTG 1 cut(s) 3791
PsuI RGATCY 3 cut(s) 1619, 2938, 4187
RsaI GTAC 9 cut(s) 379, 1440, 1471, 1850, 1909, 2319, 2844, 2931, 3096
RsaNI GTAC 9 cut(s) 378, 1439, 1470, 1849, 1908, 2318, 2843, 2930, 3095
RseI CAYNNNNRTG 7 cut(s) 890, 1041, 1329, 1539, 1917, 2132, 2207
SacI GAGCTC 2 cut(s) 264, 4112
SchI GAGTC 4 cut(s) 655, 1238, 1955, 3757
SduI GDGCHC 8 cut(s) 210, 264, 1157, 2357, 3560, 3967, 4112, 4157
SexAI ACCWGGT 1 cut(s) 1105
SfaNI GCATC 5 cut(s) 1724, 2495, 3282, 3308, 3673
SfcI CTRYAG 3 cut(s) 832, 3217, 3303
Sfr274I CTCGAG 2 cut(s) 13, 1963
SfuI TTCGAA 1 cut(s) 3770
SinI GGWCC 6 cut(s) 228, 1103, 1529, 1703, 2495, 3972
SlaI CTCGAG 2 cut(s) 13, 1963
SmiMI CAYNNNNRTG 7 cut(s) 890, 1041, 1329, 1539, 1917, 2132, 2207
SmlI CTYRAG 7 cut(s) 13, 1721, 1963, 2184, 2942, 3464, 3837
SmoI CTYRAG 7 cut(s) 13, 1721, 1963, 2184, 2942, 3464, 3837
SphI GCATGC 1 cut(s) 2110
SseBI AGGCCT 1 cut(s) 3919
SsiI CCGC 6 cut(s) 8, 319, 3059, 3062, 3188, 3686
SstI GAGCTC 2 cut(s) 264, 4112
StuI AGGCCT 1 cut(s) 3919
StyI CCWWGG 6 cut(s) 255, 1736, 2127, 2952, 3168, 4064
TaiI ACGT 1 cut(s) 3668
TaqI TCGA 7 cut(s) 14, 198, 204, 560, 1964, 2521, 3770
TatI WGTACW 4 cut(s) 1848, 1907, 2317, 3094
TauI GCSGC 2 cut(s) 3062, 3191
TseFI GTSAC 3 cut(s) 2601, 3640, 4127
Tsp45I GTSAC 3 cut(s) 2601, 3640, 4127
TspGWI ACGGA 5 cut(s) 78, 573, 1689, 2077, 2471
Van91I CCANNNNNTGG 1 cut(s) 1742
VpaK11BI GGWCC 6 cut(s) 228, 1103, 1529, 1703, 2495, 3972
XagI CCTNNNNNAGG 2 cut(s) 1254, 2853
XapI RAATTY 5 cut(s) 1242, 2007, 3230, 3469, 3610
XbaI TCTAGA 2 cut(s) 1366, 2015
XcmI CCANNNNNNNNNTGG 2 cut(s) 352, 3663
XhoI CTCGAG 2 cut(s) 13, 1963
XmaJI CCTAGG 1 cut(s) 4064
XmnI GAANNNNTTC 1 cut(s) 3163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.