Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0005700

Physical Location & Seq

Genomic Coordinates Reverse (-)

57703863 .. 57707441

Gene Structure 3579 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0449600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGTCTCTCTCTATCTCCATCCCTATCTTCTTCTTCTTCTTCTTCCTAGCTTCAGCTTCTTCAGATTCCAAGACCTTCATAGTCCAAGTCCAACCTGATTCCAAGCCCTCAGTCTTCCCAACCCATAAACACTGGTATGAGTCTTCACTGTCCTCACTATCTTCTGAACCCACACCGTTGATACATACTTACAACACAGTCTTCCATGGCTTCTCTGCCAAGCTCTCTCCTTCCCAAGCCCAAAAGCTCCAGTCTTTGCCTCATGTTTTGGCTCTCATTCCCGAGCAAGTGCGCCGCCTCCACACCACTCGCTCGCCGGAGTTCCTCGGCCTCCGGTCCACTGACACTGCTGGGCTTCTCAAAGAATCGGACTTTGGGTCGGATCTCGTGATCGGAGTTATTGATACCGGAGTTTGGCCCGAGAGGCAGAGCTTCAACGACCACGACCTTAGTCCGGTTCCGTCCAAATGGAAGGGCCAGTGCGTCGCCGGAGAGAACTTTCTGGCCAGCTCGTGTAACCGCAAGCTCATCGGAGCGAGGTACTTCTGCGGCGGGTACGAGTCCACCAACGGCAAGATGAACCAGACTACGGAGTTTCGATCTCCCAGAGACACTGACGGCCACGGCACTCACACCGCCTCCATCGCCGCCGGCCGTTACGTCTTTCCGGCATCTACTCTCGGCTATGCTAAAGGCGTCGCCGCCGGCATGGCTCCCAAGGCCCGGCTAGCAGCCTACAAGGTCTGCTGGAACGCCGGCTGTTACGACTCTGACATTCTCGCCGCCTTCGACTCTGCCGTCGCCGACGGATGCGACGTCGTCTCCCTCAGCGTCGGAGGGGTCGTTGTCCCCTACTACCTTGACGCCATTGCCATCGGAGCCTTTGGAGCCTCAGACGCCGGAGTATTCGTCTCGGCCTCCGCCGGAAATGGCGGCCCCGGTGGGCTCACGGTTACCAATGTGGCTCCATGGGTCACCACCGTCGGCGCCGGAACAATCGACCGTGACTTCCCTGCTGATGTTAAGCTCGGCAACGGCAGAATCATCCCTGGCATGAGTGTTTATGGCGGGCCGGGTCTCCCCCCGGGTCGGATGTTCCCGTTAGTTTACGCCGGCAGCGAAGGCGGTGATGGGTACTCCTCTTCTCTATGCCTAGAAGGTTCTCTTGACCAAAGGCTGGTGAAGAACAAGATAGTTGTTTGCGACAGAGGAATCAATTCAAGAGCTGCAAAAGGTGAGGTGGTGAAGAAAGCCGGAGGCGTTGGCATGATTCTTGCAAATGGTGTCTTCGACGGTGAAGGACTAGTAGCCGACTGCCACGTCTTACCTGCCACCGCCGTCGCTGCTTCCACCGGTGACGAAATAAGACAGTACATAACAGCTGCGTCCAAGTCCAAATCACCGCCAACAGCTACCATTTTGTTCAAGGGTACTCGAATCCGTGTCAAACCAGCACCGGTAGTTGCCTCATTTTCGGCCCGTGGCCCCAACCCGGAAGCGCCGGAAATACTGAAGCCGGATGTGATAGCACCTGGACTGAACATACTTGCAGCTTGGCCGGATAAAGTGGGGCCATCAGGCATTCCTTCGGATAAGAGAACCACCGAGTTCAACATTCTTTCGGGTACGTCAATGGCTTGCCCACACGTTTCGGGTCTGGCCGCCTTGTTGAAGGCGGCCCACCCGGAATGGAGTCCGGCTGCTATTAGATCGGCTCTAATGACGACAGCCTACACCATCGACAATAGAGGCGAGACGATGCTTGACGAGTCTAGTGGGAATACTTCGACAGTTATGGACTTTGGGGCTGGCCATGTCCATCCGCAAAAGGCAATGGACCCTGGATTGGTTTACGACATAAGTTCATCCGATTATGTCGATTTCTTGTGTAATTCCAATTACACGACTAAGAACATCCAGGTGATCACTAGGAAAGTAGCAAATTGCAATGGGGCAAAGAGGGCAGGCCATTCGGGGAATCTGAATTACCCATCATTGTCTGTGGTTTTCCAGCAATACGGAAAGCGAAAGATGTCTACGCATTTTATTCGGACGGTCACAAATGTCGGGGACCCGAAATCGGTTTATCAGGTGACGATCAGGCCACCCCGGGGAATGTCGGTGACAGTGAAGCCGGAGAAGCTTGCGTTTAGGAGGGTGGGGCAGAAATTGAGCTTCCTTGTGAGGGTTCAAGCTAGGGAAGTCAAGCTTTCTCCTGGAAGTAGTAGCATGAAGAGTGGGTCTGTACTGTGGTCAGATGGGAAACACACTGTGACTAGTCCTGTGGTTGTGACAATGCAACAACCTCTAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PLDc_N

Protein Analysis

771

Amino Acids

81.67

Weight (kDa)

9.07

Isoelectric Point (pI)

37.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	25 - 101	5.4e-16	Peptidase inhibitor I9
Peptidase_S8	PF00082	126 - 593	1.2e-48	Subtilase family
PA	PF02225	367 - 455	2e-11	PA domain
fn3_6	PF17766	660 - 764	1e-28	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005700)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04360 AT2G04360 AT2G04360 AT2G04360
fragaria_vesca	FvH4_6g40480 FvH4_6g40480 FvH4_6g40480 FvH4_6g40480 FvH4_6g40480 FvH4_6g40480
malus_domestica	MD09G1129600.v1.1
prunus_persica	Prupe.3G195700_v2.0.a1 Prupe.3G195700_v2.0.a1 Prupe.3G195700_v2.0.a1 Prupe.3G195700_v2.0.a1
pyrus_communis	pycom09g05260
rosa_chinensis	RchiOBHm_Chr2g0155731
rosa_laevigata	RLG00000020859
rosa_multiflora	Rmu_sc0002712.1_g000017 Rmu_sc0003417.1_g000002 Rmu_sc0011953.1_g000002
rosa_rugosa	Rorug02G0449600 Rorug02G0449700
rosa_samantha	Rh2AG515600 Rh2BG526600 Rh2CG500600 Rh2DG535600
rosa_wichuraiana	Rw2G042400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	797, 1319
AatII	GACGTC	1 cut(s)	819
Acc36I	ACCTGC	1 cut(s)	1336
AccB1I	GGYRCC	1 cut(s)	986
AccB7I	CCANNNNNTGG	1 cut(s)	1177
AccI	GTMKAC	1 cut(s)	2036
AclWI	GGATC	1 cut(s)	390
AcoI	YGGCCR	6 cut(s)	504, 619, 652, 1556, 1659, 1810
AcuI	CTGAAG	3 cut(s)	36, 45, 1532
AcyI	GRCGYC	5 cut(s)	696, 816, 864, 897, 987
AdeI	CACNNNGTG	1 cut(s)	2272
AfaI	GTAC	7 cut(s)	542, 557, 1136, 1373, 1432, 1627, 2247
AflIII	ACRYGT	1 cut(s)	1645
AgeI	ACCGGT	2 cut(s)	1352, 1456
AgsI	TTSAA	6 cut(s)	436, 1221, 1426, 1612, 1672, 2192
AhdI	GACNNNNNGTC	1 cut(s)	376
AhlI	ACTAGT	2 cut(s)	1303, 2276
AjiI	CACGTC	1 cut(s)	1321
AjnI	CCWGG	5 cut(s)	1048, 1531, 1840, 1917, 2215
AjuI	GAANNNNNNNTTGG	2 cut(s)	357, 389
Alw26I	GTCTC	6 cut(s)	9, 603, 826, 916, 1082, 1748
AlwI	GGATC	1 cut(s)	390
Ama87I	CYCGRG	4 cut(s)	281, 419, 1084, 2109
ApeKI	GCWGC	7 cut(s)	731, 1116, 1226, 1343, 1382, 1550, 1700
AsiGI	ACCGGT	2 cut(s)	1352, 1456
Asp700I	GAANNNNTTC	1 cut(s)	1216
AspLEI	GCGC	3 cut(s)	294, 989, 1501
AsuC2I	CCSGG	9 cut(s)	724, 939, 1074, 1085, 1086, 1493, 1685, 2110, 2111
AsuNHI	GCTAGC	1 cut(s)	727
AvaI	CYCGRG	4 cut(s)	281, 419, 1084, 2109
AvaII	GGWCC	3 cut(s)	336, 1837, 2071
BaeI	ACNNNNGTAYC	2 cut(s)	396, 429
BalI	TGGCCA	2 cut(s)	506, 1812
BanI	GGYRCC	1 cut(s)	986
BanII	GRGCYC	1 cut(s)	948
BauI	CACGAG	2 cut(s)	386, 511
BbsI	GAAGAC	4 cut(s)	106, 135, 193, 1279
BbvCI	CCTCAGC	1 cut(s)	827
BbvI	GCAGC	7 cut(s)	743, 1128, 1213, 1330, 1369, 1562, 1687
BccI	CCATC	9 cut(s)	26, 650, 881, 1124, 1582, 1745, 1827, 1999, 2252
BceAI	ACGGC	7 cut(s)	586, 634, 639, 640, 782, 1051, 1322
BcgI	CGANNNNNNTGC	6 cut(s)	511, 545, 1953, 1987, 2030, 2064
BciT130I	CCWGG	5 cut(s)	1050, 1533, 1842, 1919, 2217
BclI	TGATCA	1 cut(s)	1923
BcnI	CCSGG	9 cut(s)	724, 939, 1074, 1085, 1086, 1493, 1685, 2110, 2111
BcoDI	GTCTC	6 cut(s)	9, 603, 826, 916, 1082, 1748
BcuI	ACTAGT	2 cut(s)	1303, 2276
BfaI	CTAG	9 cut(s)	47, 728, 1154, 1304, 1773, 1929, 2196, 2277, 2309
BfoI	RGCGCY	2 cut(s)	990, 1502
BfuAI	ACCTGC	1 cut(s)	1336
BglI	GCCNNNNNGGC	2 cut(s)	424, 710
Bme18I	GGWCC	3 cut(s)	336, 1837, 2071
BmeRI	GACNNNNNGTC	1 cut(s)	376
BmeT110I	CYCGRG	4 cut(s)	281, 419, 1084, 2109
BmgBI	CACGTC	1 cut(s)	1321
BmsI	GCATC	3 cut(s)	680, 800, 1749
BmtI	GCTAGC	1 cut(s)	731
BoxI	GACNNNNGTC	1 cut(s)	450
BpiI	GAAGAC	4 cut(s)	106, 135, 193, 1279
BpmI	CTGGAG	1 cut(s)	233
Bpu10I	CCTNAGC	1 cut(s)	827
BpuMI	CCSGG	9 cut(s)	724, 939, 1074, 1085, 1086, 1493, 1685, 2110, 2111
BsaHI	GRCGYC	5 cut(s)	696, 816, 864, 897, 987
BsaI	GGTCTC	1 cut(s)	1082
BsaWI	WCCGGW	5 cut(s)	333, 407, 454, 1352, 1456
BsaXI	ACNNNNNCTCC	8 cut(s)	623, 653, 806, 828, 836, 858, 894, 924
Bse118I	RCCGGY	6 cut(s)	650, 704, 755, 1112, 1352, 1456
Bse1I	ACTGG	3 cut(s)	137, 250, 478
Bse3DI	GCAATG	3 cut(s)	867, 1839, 1954
BseBI	CCWGG	5 cut(s)	1050, 1533, 1842, 1919, 2217
BseGI	GGATG	8 cut(s)	18, 815, 1044, 1098, 1525, 1819, 1865, 1914
BseMI	GCAATG	3 cut(s)	867, 1839, 1954
BseMII	CTCAG	3 cut(s)	123, 841, 906
BseNI	ACTGG	3 cut(s)	137, 250, 478
BseRI	GAGGAG	1 cut(s)	1129
BseX3I	CGGCCG	1 cut(s)	652
BseXI	GCAGC	7 cut(s)	743, 1128, 1213, 1330, 1369, 1562, 1687
BseYI	CCCAGC	1 cut(s)	350
Bsh1285I	CGRYCG	2 cut(s)	655, 1003
BshNI	GGYRCC	1 cut(s)	986
BshTI	ACCGGT	2 cut(s)	1352, 1456
BsiEI	CGRYCG	2 cut(s)	655, 1003
BsiHKCI	CYCGRG	4 cut(s)	281, 419, 1084, 2109
BslFI	GGGAC	2 cut(s)	833, 2084
BsmAI	GTCTC	6 cut(s)	9, 603, 826, 916, 1082, 1748
BsmBI	CGTCTC	3 cut(s)	826, 916, 1748
BsmFI	GGGAC	2 cut(s)	833, 2084
BsmI	GAATGC	1 cut(s)	1581
Bso31I	GGTCTC	1 cut(s)	1082
BsoBI	CYCGRG	4 cut(s)	281, 419, 1084, 2109
Bsp1286I	GDGCHC	1 cut(s)	948
Bsp143I	GATC	6 cut(s)	382, 390, 599, 1709, 1923, 2097
Bsp19I	CCATGG	2 cut(s)	205, 968
BspCNI	CTCAG	3 cut(s)	122, 840, 905
BspMI	ACCTGC	1 cut(s)	1336
BspOI	GCTAGC	1 cut(s)	731
BspPI	GGATC	1 cut(s)	390
BspT107I	GGYRCC	1 cut(s)	986
BspTNI	GGTCTC	1 cut(s)	1082
BsrDI	GCAATG	3 cut(s)	867, 1839, 1954
BsrFI	RCCGGY	6 cut(s)	650, 704, 755, 1112, 1352, 1456
BsrI	ACTGG	3 cut(s)	137, 250, 478
BssAI	RCCGGY	6 cut(s)	650, 704, 755, 1112, 1352, 1456
BssMI	GATC	6 cut(s)	382, 390, 599, 1709, 1923, 2097
BssNI	GRCGYC	5 cut(s)	696, 816, 864, 897, 987
BssSI	CACGAG	2 cut(s)	386, 511
BssT1I	CCWWGG	3 cut(s)	205, 717, 968
Bst2BI	CACGAG	2 cut(s)	386, 511
Bst2UI	CCWGG	5 cut(s)	1050, 1533, 1842, 1919, 2217
Bst6I	CTCTTC	2 cut(s)	1147, 2228
BstACI	GRCGYC	5 cut(s)	696, 816, 864, 897, 987
BstDEI	CTNAG	5 cut(s)	109, 449, 827, 892, 1908
BstDSI	CCRYGG	4 cut(s)	205, 622, 968, 1480
BstEII	GGTNACC	2 cut(s)	952, 973
BstF5I	GGATG	8 cut(s)	18, 815, 1044, 1098, 1525, 1819, 1865, 1914
BstH2I	RGCGCY	2 cut(s)	990, 1502
BstHHI	GCGC	3 cut(s)	294, 989, 1501
BstKTI	GATC	6 cut(s)	385, 393, 602, 1712, 1926, 2100
BstMAI	GTCTC	6 cut(s)	9, 603, 826, 916, 1082, 1748
BstMBI	GATC	6 cut(s)	382, 390, 599, 1709, 1923, 2097
BstMCI	CGRYCG	2 cut(s)	655, 1003
BstNI	CCWGG	5 cut(s)	1050, 1533, 1842, 1919, 2217
BstPAI	GACNNNNGTC	1 cut(s)	450
BstPI	GGTNACC	2 cut(s)	952, 973
BstV1I	GCAGC	7 cut(s)	743, 1128, 1213, 1330, 1369, 1562, 1687
BstV2I	GAAGAC	4 cut(s)	106, 135, 193, 1279
BstX2I	RGATCY	1 cut(s)	382
BstYI	RGATCY	1 cut(s)	382
BstZI	CGGCCG	1 cut(s)	652
BtgI	CCRYGG	4 cut(s)	205, 622, 968, 1480
BtgZI	GCGATG	1 cut(s)	628
BtrI	CACGTC	1 cut(s)	1321
BtsCI	GGATG	8 cut(s)	18, 815, 1044, 1098, 1525, 1819, 1865, 1914
BtsI	GCAGTG	1 cut(s)	345
BtsIMutI	CAGTG	8 cut(s)	130, 146, 339, 345, 485, 612, 2133, 2268
BveI	ACCTGC	1 cut(s)	1336
CfoI	GCGC	3 cut(s)	294, 989, 1501
Cfr10I	RCCGGY	6 cut(s)	650, 704, 755, 1112, 1352, 1456
Cfr9I	CCCGGG	2 cut(s)	1084, 2109
CseI	GACGC	6 cut(s)	472, 685, 820, 872, 905, 1374
Csp6I	GTAC	7 cut(s)	541, 556, 1135, 1372, 1431, 1626, 2246
CspAI	ACCGGT	2 cut(s)	1352, 1456
CviAII	CATG	8 cut(s)	206, 263, 709, 969, 1054, 1267, 1814, 2230
CviQI	GTAC	7 cut(s)	541, 556, 1135, 1372, 1431, 1626, 2246
DdeI	CTNAG	5 cut(s)	109, 449, 827, 892, 1908
DinI	GGCGCC	1 cut(s)	988
DpnI	GATC	6 cut(s)	384, 392, 601, 1711, 1925, 2099
DpnII	GATC	6 cut(s)	382, 390, 599, 1709, 1923, 2097
DraIII	CACNNNGTG	1 cut(s)	2272
DrdI	GACNNNNNNGTC	2 cut(s)	797, 1319
DriI	GACNNNNNGTC	1 cut(s)	376
DseDI	GACNNNNNNGTC	2 cut(s)	797, 1319
EaeI	YGGCCR	6 cut(s)	504, 619, 652, 1556, 1659, 1810
EagI	CGGCCG	1 cut(s)	652
Eam1104I	CTCTTC	2 cut(s)	1147, 2228
Eam1105I	GACNNNNNGTC	1 cut(s)	376
EarI	CTCTTC	2 cut(s)	1147, 2228
EciI	GGCGGA	1 cut(s)	910
EclXI	CGGCCG	1 cut(s)	652
Eco130I	CCWWGG	3 cut(s)	205, 717, 968
Eco24I	GRGCYC	1 cut(s)	948
Eco31I	GGTCTC	1 cut(s)	1082
Eco47I	GGWCC	3 cut(s)	336, 1837, 2071
Eco52I	CGGCCG	1 cut(s)	652
Eco57I	CTGAAG	3 cut(s)	36, 45, 1532
Eco88I	CYCGRG	4 cut(s)	281, 419, 1084, 2109
Eco91I	GGTNACC	2 cut(s)	952, 973
EcoO109I	RGGNCCY	1 cut(s)	2071
EcoO65I	GGTNACC	2 cut(s)	952, 973
EcoRII	CCWGG	5 cut(s)	1048, 1531, 1840, 1917, 2215
EcoT14I	CCWWGG	3 cut(s)	205, 717, 968
EcoT38I	GRGCYC	1 cut(s)	948
EgeI	GGCGCC	1 cut(s)	988
EheI	GGCGCC	1 cut(s)	988
ErhI	CCWWGG	3 cut(s)	205, 717, 968
Esp3I	CGTCTC	3 cut(s)	826, 916, 1748
FaeI	CATG	8 cut(s)	209, 266, 712, 972, 1057, 1270, 1817, 2233
FalI	AAGNNNNNCTT	4 cut(s)	1149, 1181, 2193, 2225
FaqI	GGGAC	2 cut(s)	833, 2084
FatI	CATG	8 cut(s)	205, 262, 708, 968, 1053, 1266, 1813, 2229
FauI	CCCGC	2 cut(s)	545, 1061
FbaI	TGATCA	1 cut(s)	1923
FblI	GTMKAC	1 cut(s)	2036
FokI	GGATG	8 cut(s)	5, 822, 1031, 1105, 1532, 1806, 1852, 1901
FriOI	GRGCYC	1 cut(s)	948
FspBI	CTAG	9 cut(s)	47, 728, 1154, 1304, 1773, 1929, 2196, 2277, 2309
GlaI	GCGC	3 cut(s)	293, 988, 1500
GsaI	CCCAGC	1 cut(s)	354
GsuI	CTGGAG	1 cut(s)	233
HaeII	RGCGCY	2 cut(s)	990, 1502
HgaI	GACGC	6 cut(s)	472, 685, 820, 872, 905, 1374
HhaI	GCGC	3 cut(s)	294, 989, 1501
Hin1I	GRCGYC	5 cut(s)	696, 816, 864, 897, 987
Hin1II	CATG	8 cut(s)	209, 266, 712, 972, 1057, 1270, 1817, 2233
Hin6I	GCGC	3 cut(s)	292, 987, 1499
HinP1I	GCGC	3 cut(s)	292, 987, 1499
HindIII	AAGCTT	2 cut(s)	2141, 2207
Hpy166II	GTNNAC	5 cut(s)	339, 564, 1108, 1852, 2037
Hpy188III	TCNNGA	4 cut(s)	281, 388, 1166, 1221
Hpy8I	GTNNAC	5 cut(s)	339, 564, 1108, 1852, 2037
HpyAV	CCTTC	9 cut(s)	85, 240, 466, 796, 1115, 1151, 1292, 1596, 1666
HpyCH4IV	ACGT	5 cut(s)	660, 816, 1320, 1628, 1647
HpyCH4V	TGCA	5 cut(s)	1229, 1277, 1550, 1947, 2299
HpyF3I	CTNAG	5 cut(s)	109, 449, 827, 892, 1908
HpySE526I	ACGT	5 cut(s)	660, 816, 1320, 1628, 1647
Hsp92I	GRCGYC	5 cut(s)	696, 816, 864, 897, 987
Hsp92II	CATG	8 cut(s)	209, 266, 712, 972, 1057, 1270, 1817, 2233
HspAI	GCGC	3 cut(s)	292, 987, 1499
KasI	GGCGCC	1 cut(s)	986
KflI	GGGWCCC	1 cut(s)	2071
KroI	GCCGGC	4 cut(s)	650, 704, 755, 1112
KroNI	GCCGGC	4 cut(s)	652, 706, 757, 1114
Ksp22I	TGATCA	1 cut(s)	1923
Kzo9I	GATC	6 cut(s)	382, 390, 599, 1709, 1923, 2097
LmnI	GCTCC	6 cut(s)	252, 533, 718, 878, 887, 970
Lsp1109I	GCAGC	7 cut(s)	743, 1128, 1213, 1330, 1369, 1562, 1687
LweI	GCATC	3 cut(s)	680, 800, 1749
MaeI	CTAG	9 cut(s)	47, 728, 1154, 1304, 1773, 1929, 2196, 2277, 2309
MaeII	ACGT	5 cut(s)	660, 816, 1320, 1628, 1647
MalI	GATC	6 cut(s)	384, 392, 601, 1711, 1925, 2099
MboI	GATC	6 cut(s)	382, 390, 599, 1709, 1923, 2097
MflI	RGATCY	1 cut(s)	382
MhlI	GDGCHC	1 cut(s)	948
MlsI	TGGCCA	2 cut(s)	506, 1812
MluCI	AATT	6 cut(s)	1216, 1891, 1897, 1942, 1984, 2168
MluNI	TGGCCA	2 cut(s)	506, 1812
Mly113I	GGCGCC	1 cut(s)	987
MlyI	GAGTC	6 cut(s)	149, 569, 761, 785, 1702, 1778
MmeI	TCCRAC	4 cut(s)	115, 360, 814, 1070
Mox20I	TGGCCA	2 cut(s)	506, 1812
MroNI	GCCGGC	4 cut(s)	650, 704, 755, 1112
MroXI	GAANNNNTTC	1 cut(s)	1216
MscI	TGGCCA	2 cut(s)	506, 1812
MseI	TTAA	1 cut(s)	1023
MslI	CAYNNNNRTG	2 cut(s)	135, 1919
Msp20I	TGGCCA	2 cut(s)	506, 1812
MspA1I	CMGCKG	1 cut(s)	1382
Mva1269I	GAATGC	1 cut(s)	1581
MvaI	CCWGG	5 cut(s)	1050, 1533, 1842, 1919, 2217
NaeI	GCCGGC	4 cut(s)	652, 706, 757, 1114
NarI	GGCGCC	1 cut(s)	987
NciI	CCSGG	9 cut(s)	724, 939, 1074, 1085, 1086, 1493, 1685, 2110, 2111
NcoI	CCATGG	2 cut(s)	205, 968
NdeII	GATC	6 cut(s)	382, 390, 599, 1709, 1923, 2097
NgoMIV	GCCGGC	4 cut(s)	650, 704, 755, 1112
NheI	GCTAGC	1 cut(s)	727
NlaIII	CATG	8 cut(s)	209, 266, 712, 972, 1057, 1270, 1817, 2233
NmeAIII	GCCGAG	4 cut(s)	306, 660, 893, 1008
NmuCI	GTSAC	8 cut(s)	973, 1004, 1355, 2056, 2092, 2122, 2272, 2290
PcsI	WCGNNNNNNNCGW	5 cut(s)	786, 795, 813, 840, 1116
PctI	GAATGC	1 cut(s)	1581
PdiI	GCCGGC	4 cut(s)	652, 706, 757, 1114
PdmI	GAANNNNTTC	1 cut(s)	1216
PfeI	GAWTC	8 cut(s)	65, 98, 365, 1041, 1212, 1270, 1437, 1978
PflFI	GACNNNGTC	1 cut(s)	818
PflMI	CCANNNNNTGG	1 cut(s)	1177
PfoI	TCCNGGA	1 cut(s)	2215
PinAI	ACCGGT	2 cut(s)	1352, 1456
PleI	GAGTC	6 cut(s)	148, 568, 761, 785, 1701, 1777
PluTI	GGCGCC	1 cut(s)	990
PpsI	GAGTC	6 cut(s)	148, 568, 761, 785, 1701, 1777
PpuMI	RGGWCCY	1 cut(s)	2071
PshAI	GACNNNNGTC	1 cut(s)	450
Psp5II	RGGWCCY	1 cut(s)	2071
Psp6I	CCWGG	5 cut(s)	1048, 1531, 1840, 1917, 2215
PspEI	GGTNACC	2 cut(s)	952, 973
PspFI	CCCAGC	1 cut(s)	350
PspGI	CCWGG	5 cut(s)	1048, 1531, 1840, 1917, 2215
PspPPI	RGGWCCY	1 cut(s)	2071
PsuI	RGATCY	1 cut(s)	382
PsyI	GACNNNGTC	1 cut(s)	818
PvuII	CAGCTG	1 cut(s)	1382
RsaI	GTAC	7 cut(s)	542, 557, 1136, 1373, 1432, 1627, 2247
RsaNI	GTAC	7 cut(s)	541, 556, 1135, 1372, 1431, 1626, 2246
RseI	CAYNNNNRTG	2 cut(s)	135, 1919
SaqAI	TTAA	1 cut(s)	1023
Sau3AI	GATC	6 cut(s)	382, 390, 599, 1709, 1923, 2097
SchI	GAGTC	6 cut(s)	149, 569, 761, 785, 1702, 1778
SduI	GDGCHC	1 cut(s)	948
SfaNI	GCATC	3 cut(s)	680, 800, 1749
SfoI	GGCGCC	1 cut(s)	988
SgrAI	CRCCGGYG	1 cut(s)	1352
SinI	GGWCC	3 cut(s)	336, 1837, 2071
SmaI	CCCGGG	2 cut(s)	1086, 2111
SmiMI	CAYNNNNRTG	2 cut(s)	135, 1919
SpeI	ACTAGT	2 cut(s)	1303, 2276
Sse9I	AATT	6 cut(s)	1216, 1891, 1897, 1942, 1984, 2168
SspDI	GGCGCC	1 cut(s)	986
SspMI	CTAG	9 cut(s)	47, 728, 1154, 1304, 1773, 1929, 2196, 2277, 2309
StyI	CCWWGG	3 cut(s)	205, 717, 968
TaiI	ACGT	5 cut(s)	663, 819, 1323, 1631, 1650
TaqI	TCGA	8 cut(s)	598, 789, 999, 1290, 1435, 1740, 1787, 1878
TasI	AATT	6 cut(s)	1216, 1891, 1897, 1942, 1984, 2168
TatI	WGTACW	2 cut(s)	1371, 2245
TauI	GCSGC	8 cut(s)	297, 552, 650, 704, 785, 936, 1664, 1679
TfiI	GAWTC	8 cut(s)	65, 98, 365, 1041, 1212, 1270, 1437, 1978
Tru1I	TTAA	1 cut(s)	1023
Tru9I	TTAA	1 cut(s)	1023
TscAI	CASTG	8 cut(s)	137, 153, 346, 352, 485, 619, 2133, 2275
TseFI	GTSAC	8 cut(s)	973, 1004, 1355, 2056, 2092, 2122, 2272, 2290
TseI	GCWGC	7 cut(s)	731, 1116, 1226, 1343, 1382, 1550, 1700
Tsp45I	GTSAC	8 cut(s)	973, 1004, 1355, 2056, 2092, 2122, 2272, 2290
TspDTI	ATGAA	4 cut(s)	67, 593, 1854, 2246
TspGWI	ACGGA	5 cut(s)	450, 605, 822, 1430, 2034
TspMI	CCCGGG	2 cut(s)	1084, 2109
TspRI	CASTG	8 cut(s)	137, 153, 346, 352, 485, 619, 2133, 2275
Tth111I	GACNNNGTC	1 cut(s)	818
Van91I	CCANNNNNTGG	1 cut(s)	1177
VpaK11BI	GGWCC	3 cut(s)	336, 1837, 2071
XmaI	CCCGGG	2 cut(s)	1084, 2109
XmiI	GTMKAC	1 cut(s)	2036
XmnI	GAANNNNTTC	1 cut(s)	1216
XspI	CTAG	9 cut(s)	47, 728, 1154, 1304, 1773, 1929, 2196, 2277, 2309
ZraI	GACGTC	1 cut(s)	817

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.