Rorug02G0485100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0014123
Physical Location & Seq
Reverse (-)
61506670 .. 61510686
4017 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0485100.1

Sequence Viewer

Length: 2220 bp
ATGGATGTTGTGCAGCTTTTACTTCATATTACTCTGTTCTTGTGGTGTGTCAGTATTAATACTGCTACAGTAGCAGCAGCACCACAACAAATCTTAATAGCAAAGCCTAATTGTCCATCACATTGTGGAAACATTTCAATCCCATATCCTTTTGGAATTGGACCAGGTTGTTATGTAGATAACTGGTTCAAAATACTGTGTAATGAGTCAGTCAGCTCACCCAAACCTTTCTTGAACCTCACCACTCTGAATCATCTTGAGGTACTGGAAATTTCCAGTGCAGGAACACTAAAAGTCAGAAACCTGATTACGGTCTCTGATAATTGCAGTGATAAGCCAATTCGGCAAGCAGCCAACTTGGGGGCAAGCCCTTTTGCGTTCTCTCAAAAGAACAAATTCACAGTAGTTGGTTGTGGTGTTATGGCTGGGCTGAATTCTAGCTCAGATGACTTGACTATCTCGGCTACGTGCTTGTCCCAGTGTGAAATTGCCTCCAATGCAAGCAGTACGTGCAATGGTTTGGATTGCAGCCAGGTCATCATCCCTTCCTTTCTCTCTACCTTCCGTACCAGTTTCATATCTACAACAAATCCATGCAATTATGCATTCTTGGCAGACCAGGACTGGTTTCAGTCGTTTACCATCAATTTAACTAATATCTCTGCCAGAATTAGTGATATGGATTATGTGCCTGCCGTGTTGGAATGGGGCTTATATCATTCGATCCTCGATGTATTTGGAACCTCTTCAATCGCTTCTGATAGATCTGTTAACTGCCTGGAAAAAAATGACACCTCTTCAACATATAGTTCCTCAAGGCTGGAATGTTTCTGTGCAACGGGCTTTGAAGGAAACCCCTATCTCATTGAAGGATGTCAAGATATAAATGAATGCTTGGCTCCAAACCGGCAGTGTCCTGTGGACTATGCTTGTAAGAATCATCCTGGATATGCCGAATGCTACTATCCAAAGAGAAAGTCCGCAGTTAAACTGGCCTTTATAGTTATCGGTAGCGTTCTTGGACTACTGTTTCTACTCGGTGTTGCTTGGTGGTTGCACAAAGCCATAAAGAAAAGGAAGAACATAAAGCAGAAGGAGAAGTTTTTTAAACAAAATGGTGGTTTATTGTTGGAGCAACAACTATTATCTGGTGAAGTAAATGTCGACAAAATTAAGTTGTTCAATTCAAAGGAGTTAGACAAAGCTACTGACCACTTTAATGTGGACAGAATTCTTGGCCAAGGAGGCCAAGGTACCGTTTACAAAGGAATGCTGGAAGATGGAAGAATTGTTGCTGTAAAGCAGTCTAAAAAACTTGTTGGAGGTGAAGGTGGAAATTTCATTAATGAAATTGTCATTCTTTCACAAATTAACCATAGGAATGTGGTCAAGTTATTGGGGTGCTGTTTAGAGACGGAAGTTCCTCTTTTGGTTTATGAATTCATACTTAATGGAACACTTTCTCAGTATATTCATCACCATAATGAGGAGTTTCCTCTCACTTGGGAAATGCGCTTACGGGTGTCGATGGAAATTGCAGGAGCTATTTCGTACTTACATTCTTCTGCTTCCATGCCTATATACCACAGAGACATCAAGTCTTCTAACATACTATTGGATGATAAGTATAGAGCCAAAGTAGCAGACTTTGGAACATCAAGATCTATTGCCATTGATAAGACACACCTTACTACACGAGTACAAGGAACATTTGGTTATCTAGACCCAGAATATTTCCAATCCAGTCAATTTACTGACAAGAGTGATGTTTATAGCTTTGGAGTGGTCCTTGCTGAGCTCTTGACAGGACAAAAACCAATTTCTCCGACAACCTCAGATGAATGGAGAAGCCTGGCAAACCATTTCATTCTTTCAATGGAAGGAAATTGCCTGTTCGATATTCTCGATACTCGAGTTAGAAGTGATGGTCGGGAAGAAGAAATTGTGGCAGTTGCTAACCTTGCAAAGAGATGCTTAAATTTGAACGGGAGAAAACGACCTACAATGAAAGAAGTTGCTGTGGAGTTGGAGGGAATCCAATTGTCGGTTAAAGCTCATTCTGATGCTCAACAAAACTTCTCAGAGATTGGGTATGATCGAACTAATGGAATGACCGAGGCTTGGGATGTTTGTTCTACATCAACAGGGTTATCATGTATGGATAGTACTACAGGTTCTTCATTAGATGCACAACCTCTGCTGTCCTTTAAGTATGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_11

Protein Analysis

739

Amino Acids

81.65

Weight (kDa)

5.94

Isoelectric Point (pI)

38.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 38 - 99 6e-12 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 406 - 672 6.2e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 408 - 675 1.6e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G16030 AT4G26730
fragaria_vesca FvH4_6g43920 FvH4_6g43920
malus_domestica MD09G1102000.v1.1 MD09G1127700.v1.1
prunus_persica Prupe.3G223700_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0160701
rosa_laevigata RLG00000021234
rosa_multiflora Rmu_co8474907.1_g000001
rosa_roxburghii Rroxscaffold_2G00089470
rosa_rugosa Rorug02G0485100
rosa_samantha Rh2AG550100 Rh2BG564600 Rh2CG534500 Rh2DG573400
rosa_wichuraiana Rw2G045580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1253
AccB1I GGYRCC 1 cut(s) 1253
AccI GTMKAC 1 cut(s) 1164
AciI CCGC 1 cut(s) 981
AclWI GGATC 1 cut(s) 718
AcoI YGGCCR 1 cut(s) 1237
AcsI RAATTY 7 cut(s) 270, 395, 433, 1230, 1336, 1439, 1978
AdeI CACNNNGTG 1 cut(s) 125
AfaI GTAC 7 cut(s) 264, 508, 568, 1255, 1553, 1701, 2167
AfiI CCNNNNNNNGG 5 cut(s) 310, 360, 1486, 2044, 2121
AhdI GACNNNNNGTC 1 cut(s) 1597
AjnI CCWGG 6 cut(s) 163, 531, 618, 777, 943, 1851
AluBI AGCT 8 cut(s) 16, 216, 441, 1205, 1544, 1776, 1798, 2054
AluI AGCT 8 cut(s) 16, 216, 441, 1205, 1544, 1776, 1798, 2054
Alw21I GWGCWC 1 cut(s) 1800
Alw26I GTCTC 3 cut(s) 319, 1406, 1584
AlwI GGATC 1 cut(s) 718
Ama87I CYCGRG 1 cut(s) 1911
AoxI GGCC 3 cut(s) 993, 1237, 1246
ApeKI GCWGC 5 cut(s) 13, 74, 77, 350, 528
ApoI RAATTY 7 cut(s) 270, 395, 433, 1230, 1336, 1439, 1978
ArsI GACNNNNNNTTYG 2 cut(s) 962, 994
AseI ATTAAT 2 cut(s) 57, 1344
Asp700I GAANNNNTTC 4 cut(s) 133, 395, 745, 1459
Asp718I GGTACC 1 cut(s) 1253
AspLEI GCGC 1 cut(s) 1515
AspS9I GGNCC 2 cut(s) 161, 1786
AsuHPI GGTGA 5 cut(s) 210, 232, 1163, 1337, 1469
AvaI CYCGRG 1 cut(s) 1911
AvaII GGWCC 2 cut(s) 161, 1786
BaeI ACNNNNGTAYC 2 cut(s) 1899, 1932
BalI TGGCCA 1 cut(s) 1239
BanI GGYRCC 1 cut(s) 1253
BanII GRGCYC 1 cut(s) 1800
BauI CACGAG 1 cut(s) 1695
BbsI GAAGAC 1 cut(s) 1593
Bbv12I GWGCWC 1 cut(s) 1800
BbvI GCAGC 5 cut(s) 25, 86, 89, 362, 540
BccI CCATC 5 cut(s) 124, 650, 1274, 1522, 1919
BceAI ACGGC 1 cut(s) 680
BciT130I CCWGG 6 cut(s) 165, 533, 620, 779, 945, 1853
BcoDI GTCTC 3 cut(s) 319, 1406, 1584
BfaI CTAG 2 cut(s) 438, 1721
BfmI CTRYAG 2 cut(s) 66, 2169
BglI GCCNNNNNGGC 2 cut(s) 343, 1245
BglII AGATCT 2 cut(s) 764, 1661
BisI GCNGC 5 cut(s) 14, 75, 78, 351, 529
BlpI GCTNAGC 1 cut(s) 1794
BlsI GCNGC 5 cut(s) 15, 76, 79, 352, 530
BmcAI AGTACT 1 cut(s) 2167
Bme1390I CCNGG 6 cut(s) 165, 533, 620, 779, 945, 1853
Bme18I GGWCC 2 cut(s) 161, 1786
BmeRI GACNNNNNGTC 1 cut(s) 1597
BmeT110I CYCGRG 1 cut(s) 1911
BmgT120I GGNCC 2 cut(s) 161, 1786
BmiI GGNNCC 3 cut(s) 742, 900, 1255
BmrFI CCNGG 6 cut(s) 165, 533, 620, 779, 945, 1853
BmrI ACTGGG 1 cut(s) 472
BmsI GCATC 3 cut(s) 1961, 2053, 2176
BmuI ACTGGG 1 cut(s) 472
BpiI GAAGAC 1 cut(s) 1593
Bpu1102I GCTNAGC 1 cut(s) 1794
BpuEI CTTGAG 2 cut(s) 278, 799
BsaAI YACGTR 2 cut(s) 468, 510
BsaI GGTCTC 1 cut(s) 319
BsaJI CCNNGG 3 cut(s) 1240, 1249, 2115
Bsc4I CCNNNNNNNGG 5 cut(s) 310, 360, 1486, 2044, 2121
Bse118I RCCGGY 1 cut(s) 906
Bse1I ACTGG 8 cut(s) 188, 270, 276, 478, 570, 629, 996, 1743
Bse3DI GCAATG 1 cut(s) 520
BseBI CCWGG 6 cut(s) 165, 533, 620, 779, 945, 1853
BseDI CCNNGG 3 cut(s) 1240, 1249, 2115
BseGI GGATG 6 cut(s) 10, 540, 878, 940, 1624, 2131
BseLI CCNNNNNNNGG 5 cut(s) 310, 360, 1486, 2044, 2121
BseMI GCAATG 1 cut(s) 520
BseMII CTCAG 5 cut(s) 456, 1478, 1785, 1848, 2094
BseNI ACTGG 8 cut(s) 188, 270, 276, 478, 570, 629, 996, 1743
BseRI GAGGAG 1 cut(s) 1502
BseXI GCAGC 5 cut(s) 25, 86, 89, 362, 540
BseYI CCCAGC 1 cut(s) 425
BsgI GTGCAG 2 cut(s) 32, 300
BshFI GGCC 3 cut(s) 995, 1239, 1248
BshNI GGYRCC 1 cut(s) 1253
BsiHKAI GWGCWC 1 cut(s) 1800
BsiHKCI CYCGRG 1 cut(s) 1911
BsiSI CCGG 1 cut(s) 907
BslFI GGGAC 1 cut(s) 460
BslI CCNNNNNNNGG 5 cut(s) 310, 360, 1486, 2044, 2121
BsmAI GTCTC 3 cut(s) 319, 1406, 1584
BsmBI CGTCTC 1 cut(s) 1406
BsmFI GGGAC 1 cut(s) 460
BsmI GAATGC 4 cut(s) 605, 896, 962, 1275
BsnI GGCC 3 cut(s) 995, 1239, 1248
Bso31I GGTCTC 1 cut(s) 319
BsoBI CYCGRG 1 cut(s) 1911
Bsp1286I GDGCHC 1 cut(s) 1800
Bsp143I GATC 4 cut(s) 723, 764, 1661, 2095
Bsp1720I GCTNAGC 1 cut(s) 1794
BspACI CCGC 1 cut(s) 981
BspANI GGCC 3 cut(s) 995, 1239, 1248
BspCNI CTCAG 5 cut(s) 455, 1477, 1786, 1847, 2093
BspLI GGNNCC 3 cut(s) 742, 900, 1255
BspPI GGATC 1 cut(s) 718
BspT107I GGYRCC 1 cut(s) 1253
BspTNI GGTCTC 1 cut(s) 319
BsrDI GCAATG 1 cut(s) 520
BsrFI RCCGGY 1 cut(s) 906
BsrI ACTGG 8 cut(s) 188, 270, 276, 478, 570, 629, 996, 1743
BssAI RCCGGY 1 cut(s) 906
BssECI CCNNGG 3 cut(s) 1240, 1249, 2115
BssMI GATC 4 cut(s) 723, 764, 1661, 2095
BssSI CACGAG 1 cut(s) 1695
BssT1I CCWWGG 2 cut(s) 1240, 1249
Bst2BI CACGAG 1 cut(s) 1695
Bst2UI CCWGG 6 cut(s) 165, 533, 620, 779, 945, 1853
Bst4CI ACNGT 6 cut(s) 70, 198, 313, 403, 1029, 1258
Bst6I CTCTTC 2 cut(s) 751, 802
BstAPI GCANNNNNTGC 1 cut(s) 510
BstBAI YACGTR 2 cut(s) 468, 510
BstC8I GCNNGC 4 cut(s) 348, 367, 502, 693
BstDEI CTNAG 5 cut(s) 442, 1464, 1794, 1834, 2080
BstF5I GGATG 6 cut(s) 10, 540, 878, 940, 1624, 2131
BstHHI GCGC 1 cut(s) 1515
BstKTI GATC 4 cut(s) 726, 767, 1664, 2098
BstMAI GTCTC 3 cut(s) 319, 1406, 1584
BstMBI GATC 4 cut(s) 723, 764, 1661, 2095
BstMWI GCNNNNNNNGC 8 cut(s) 71, 343, 497, 510, 611, 1245, 1640, 1961
BstNI CCWGG 6 cut(s) 165, 533, 620, 779, 945, 1853
BstSCI CCNGG 6 cut(s) 163, 531, 618, 777, 943, 1851
BstSFI CTRYAG 2 cut(s) 66, 2169
BstV1I GCAGC 5 cut(s) 25, 86, 89, 362, 540
BstV2I GAAGAC 1 cut(s) 1593
BstX2I RGATCY 2 cut(s) 764, 1661
BstYI RGATCY 2 cut(s) 764, 1661
BsuRI GGCC 3 cut(s) 995, 1239, 1248
BtsCI GGATG 6 cut(s) 10, 540, 878, 940, 1624, 2131
BtsI GCAGTG 2 cut(s) 334, 917
BtsIMutI CAGTG 4 cut(s) 283, 334, 485, 917
Cac8I GCNNGC 4 cut(s) 348, 367, 502, 693
CfoI GCGC 1 cut(s) 1515
Cfr10I RCCGGY 1 cut(s) 906
Cfr13I GGNCC 2 cut(s) 161, 1786
CsiI ACCWGGT 1 cut(s) 163
Csp6I GTAC 7 cut(s) 263, 507, 567, 1254, 1552, 1700, 2166
CviAII CATG 3 cut(s) 594, 1573, 2154
CviQI GTAC 7 cut(s) 263, 507, 567, 1254, 1552, 1700, 2166
DdeI CTNAG 5 cut(s) 442, 1464, 1794, 1834, 2080
DpnI GATC 4 cut(s) 725, 766, 1663, 2097
DpnII GATC 4 cut(s) 723, 764, 1661, 2095
DraI TTTAAA 1 cut(s) 1108
DraIII CACNNNGTG 1 cut(s) 125
DriI GACNNNNNGTC 1 cut(s) 1597
EaeI YGGCCR 1 cut(s) 1237
Eam1104I CTCTTC 2 cut(s) 751, 802
Eam1105I GACNNNNNGTC 1 cut(s) 1597
EarI CTCTTC 2 cut(s) 751, 802
Ecl136II GAGCTC 1 cut(s) 1798
Eco130I CCWWGG 2 cut(s) 1240, 1249
Eco24I GRGCYC 1 cut(s) 1800
Eco31I GGTCTC 1 cut(s) 319
Eco47I GGWCC 2 cut(s) 161, 1786
Eco53kI GAGCTC 1 cut(s) 1798
Eco88I CYCGRG 1 cut(s) 1911
EcoICRI GAGCTC 1 cut(s) 1798
EcoRI GAATTC 3 cut(s) 433, 1230, 1439
EcoRII CCWGG 6 cut(s) 163, 531, 618, 777, 943, 1851
EcoT14I CCWWGG 2 cut(s) 1240, 1249
EcoT22I ATGCAT 1 cut(s) 607
EcoT38I GRGCYC 1 cut(s) 1800
ErhI CCWWGG 2 cut(s) 1240, 1249
Esp3I CGTCTC 1 cut(s) 1406
FaeI CATG 3 cut(s) 597, 1576, 2157
FalI AAGNNNNNCTT 4 cut(s) 1410, 1442, 1958, 1990
FaqI GGGAC 1 cut(s) 460
FatI CATG 3 cut(s) 593, 1572, 2153
FblI GTMKAC 1 cut(s) 1164
Fnu4HI GCNGC 5 cut(s) 14, 75, 78, 351, 529
FokI GGATG 6 cut(s) 17, 527, 885, 927, 1631, 2138
FriOI GRGCYC 1 cut(s) 1800
Fsp4HI GCNGC 5 cut(s) 14, 75, 78, 351, 529
FspBI CTAG 2 cut(s) 438, 1721
GlaI GCGC 1 cut(s) 1514
GluI GCNGC 5 cut(s) 14, 75, 78, 351, 529
GsaI CCCAGC 1 cut(s) 429
HaeIII GGCC 3 cut(s) 995, 1239, 1248
HapII CCGG 1 cut(s) 907
HhaI GCGC 1 cut(s) 1515
Hin1II CATG 3 cut(s) 597, 1576, 2157
Hin6I GCGC 1 cut(s) 1513
HinP1I GCGC 1 cut(s) 1513
HincII GTYRAC 2 cut(s) 772, 1165
HindII GTYRAC 2 cut(s) 772, 1165
HinfI GANTC 4 cut(s) 206, 250, 937, 2034
HpaI GTTAAC 1 cut(s) 772
HpaII CCGG 1 cut(s) 907
HphI GGTGA 5 cut(s) 210, 232, 1163, 1337, 1469
Hpy166II GTNNAC 6 cut(s) 639, 772, 922, 1165, 1225, 1261
Hpy188I TCNGA 9 cut(s) 249, 299, 319, 445, 760, 1827, 1837, 2062, 2083
Hpy188III TCNNGA 8 cut(s) 232, 257, 878, 1659, 1721, 1801, 1904, 1931
Hpy8I GTNNAC 6 cut(s) 639, 772, 922, 1165, 1225, 1261
HpyAV CCTTC 7 cut(s) 555, 571, 842, 863, 1087, 1322, 1874
HpyCH4III ACNGT 6 cut(s) 70, 198, 313, 403, 1029, 1258
HpyCH4IV ACGT 2 cut(s) 467, 509
HpyF10VI GCNNNNNNNGC 8 cut(s) 71, 343, 497, 510, 611, 1245, 1640, 1961
HpyF3I CTNAG 5 cut(s) 442, 1464, 1794, 1834, 2080
HpySE526I ACGT 2 cut(s) 467, 509
Hsp92II CATG 3 cut(s) 597, 1576, 2157
HspAI GCGC 1 cut(s) 1513
KpnI GGTACC 1 cut(s) 1257
KspAI GTTAAC 1 cut(s) 772
Kzo9I GATC 4 cut(s) 723, 764, 1661, 2095
LmnI GCTCC 3 cut(s) 904, 1132, 1541
Lsp1109I GCAGC 5 cut(s) 25, 86, 89, 362, 540
LweI GCATC 3 cut(s) 1961, 2053, 2176
MabI ACCWGGT 1 cut(s) 163
MaeI CTAG 2 cut(s) 438, 1721
MaeII ACGT 2 cut(s) 467, 509
MalI GATC 4 cut(s) 725, 766, 1663, 2097
MboI GATC 4 cut(s) 723, 764, 1661, 2095
MfeI CAATTG 1 cut(s) 2039
MflI RGATCY 2 cut(s) 764, 1661
MhlI GDGCHC 1 cut(s) 1800
MlsI TGGCCA 1 cut(s) 1239
MluNI TGGCCA 1 cut(s) 1239
MlyI GAGTC 1 cut(s) 215
MmeI TCCRAC 5 cut(s) 681, 1110, 1300, 1850, 2007
Mox20I TGGCCA 1 cut(s) 1239
Mph1103I ATGCAT 1 cut(s) 607
MroXI GAANNNNTTC 4 cut(s) 133, 395, 745, 1459
MscI TGGCCA 1 cut(s) 1239
MslI CAYNNNNRTG 4 cut(s) 1218, 1380, 1482, 2061
Msp20I TGGCCA 1 cut(s) 1239
MspI CCGG 1 cut(s) 907
MspR9I CCNGG 6 cut(s) 165, 533, 620, 779, 945, 1853
MunI CAATTG 1 cut(s) 2039
Mva1269I GAATGC 4 cut(s) 605, 896, 962, 1275
MvaI CCWGG 6 cut(s) 165, 533, 620, 779, 945, 1853
MwoI GCNNNNNNNGC 8 cut(s) 71, 343, 497, 510, 611, 1245, 1640, 1961
NdeII GATC 4 cut(s) 723, 764, 1661, 2095
NlaIII CATG 3 cut(s) 597, 1576, 2157
NlaIV GGNNCC 3 cut(s) 742, 900, 1255
NmeAIII GCCGAG 1 cut(s) 440
NsiI ATGCAT 1 cut(s) 607
PaeR7I CTCGAG 1 cut(s) 1911
PcsI WCGNNNNNNNCGW 1 cut(s) 1902
PctI GAATGC 4 cut(s) 605, 896, 962, 1275
PdmI GAANNNNTTC 4 cut(s) 133, 395, 745, 1459
PfeI GAWTC 3 cut(s) 250, 937, 2034
PfoI TCCNGGA 1 cut(s) 943
PkrI GCNGC 5 cut(s) 15, 76, 79, 352, 530
PleI GAGTC 1 cut(s) 214
PpsI GAGTC 1 cut(s) 214
Ppu21I YACGTR 2 cut(s) 468, 510
PshBI ATTAAT 2 cut(s) 57, 1344
Psp124BI GAGCTC 1 cut(s) 1800
Psp6I CCWGG 6 cut(s) 163, 531, 618, 777, 943, 1851
PspFI CCCAGC 1 cut(s) 425
PspGI CCWGG 6 cut(s) 163, 531, 618, 777, 943, 1851
PspN4I GGNNCC 3 cut(s) 742, 900, 1255
PspPI GGNCC 2 cut(s) 161, 1786
PspXI VCTCGAGB 1 cut(s) 1911
PsrI GAACNNNNNNTAC 2 cut(s) 2158, 2190
PsuI RGATCY 2 cut(s) 764, 1661
RsaI GTAC 7 cut(s) 264, 508, 568, 1255, 1553, 1701, 2167
RsaNI GTAC 7 cut(s) 263, 507, 567, 1254, 1552, 1700, 2166
RseI CAYNNNNRTG 4 cut(s) 1218, 1380, 1482, 2061
SacI GAGCTC 1 cut(s) 1800
SalI GTCGAC 1 cut(s) 1163
SatI GCNGC 5 cut(s) 14, 75, 78, 351, 529
Sau3AI GATC 4 cut(s) 723, 764, 1661, 2095
Sau96I GGNCC 2 cut(s) 161, 1786
ScaI AGTACT 1 cut(s) 2167
SchI GAGTC 1 cut(s) 215
ScrFI CCNGG 6 cut(s) 165, 533, 620, 779, 945, 1853
SduI GDGCHC 1 cut(s) 1800
SexAI ACCWGGT 1 cut(s) 163
SfaNI GCATC 3 cut(s) 1961, 2053, 2176
SfcI CTRYAG 2 cut(s) 66, 2169
SfiI GGCCNNNNNGGCC 1 cut(s) 1245
Sfr274I CTCGAG 1 cut(s) 1911
SinI GGWCC 2 cut(s) 161, 1786
SlaI CTCGAG 1 cut(s) 1911
SmiMI CAYNNNNRTG 4 cut(s) 1218, 1380, 1482, 2061
SmlI CTYRAG 3 cut(s) 257, 814, 1911
SmoI CTYRAG 3 cut(s) 257, 814, 1911
SsiI CCGC 1 cut(s) 981
SspI AATATT 1 cut(s) 1733
SspMI CTAG 2 cut(s) 438, 1721
SstI GAGCTC 1 cut(s) 1800
StyD4I CCNGG 6 cut(s) 163, 531, 618, 777, 943, 1851
StyI CCWWGG 2 cut(s) 1240, 1249
TaaI ACNGT 6 cut(s) 70, 198, 313, 403, 1029, 1258
TaiI ACGT 2 cut(s) 470, 512
TaqI TCGA 8 cut(s) 722, 729, 1164, 1526, 1896, 1905, 1912, 2098
TaqII GACCGA 1 cut(s) 2129
TatI WGTACW 2 cut(s) 1699, 2165
TfiI GAWTC 3 cut(s) 250, 937, 2034
TscAI CASTG 4 cut(s) 283, 334, 485, 917
TseI GCWGC 5 cut(s) 13, 74, 77, 350, 528
TspGWI ACGGA 2 cut(s) 554, 1430
TspRI CASTG 4 cut(s) 283, 334, 485, 917
VpaK11BI GGWCC 2 cut(s) 161, 1786
VspI ATTAAT 2 cut(s) 57, 1344
XapI RAATTY 7 cut(s) 270, 395, 433, 1230, 1336, 1439, 1978
XbaI TCTAGA 1 cut(s) 1720
XhoI CTCGAG 1 cut(s) 1911
XmiI GTMKAC 1 cut(s) 1164
XmnI GAANNNNTTC 4 cut(s) 133, 395, 745, 1459
XspI CTAG 2 cut(s) 438, 1721
ZrmI AGTACT 1 cut(s) 2167
Zsp2I ATGCAT 1 cut(s) 607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.