Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0011836

Physical Location & Seq

Genomic Coordinates Forward (+)

61725051 .. 61756252

Gene Structure 31202 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0487800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGCTTCTGGTAGATTCCATTCAAATGTCCGTCGACACATCGATGCTACGTTTGAAAATGAATATGGTTACCACACCAGTAATCCTGTGGGATTACTGGAGATTCAAACAGTTGCTAGAGGAGCCTCCATCCTGGAGATTGAAACAGTTGCTGGAGGAGCTTCATTCCGAAACCAAAACCGAAACCATGTAGTTCCATTAACTGTAGGTGATGAGGGTGTTTCCTTGACATGGCAAGATTTGTGGGTGAGAGTAGAAGGAAGAAGCTGTAGATCAATCCTCCAAGGGCTAACTGGTTATGCCAAACCAGGGCAGCTCTTGGCTATAATGGGTCCTTCTGGTTGTGGCAAGTCTACTCTTCTTGATGCTTTGGCAGGGAGACTCAGTTCAAACACAAGGCAAACAGGGGAGATCCTAATCAATGGACATAAACAAGCACTGGCTTATGGAACTTCTGCATATGTGACACAAGATGATACTCTAATCACAACATTAACAGTCGAAGAAGCCGTATACTACTCAGCTCAGCTGCAATTACCAGACTCCATGTCCAAGTCGGAAAAGAAAGAGAGAGCACAGGTAACGATAAGAGAGATGGGTTTGCAAGATGCCATGAACACGAGGATCGGAGGTTGGGGAGCCAAAGGCCTCAGTGGCGGCCAAAAGAGAAGAGTCAGCATTTGCATTGAGCTTCTTACGCGACCAAAGCTTCTCTTCTTGGACGAGCCAACAAGCGGGCTTGACAGCGCGGCGTCTTATTATGTGATGAGCCGAATTGCAAATCTTGGTTGTCATAAATCCTCGCAGAGGACTATTGTTGCTTCCATCCATCAGCCTAGCTCTGAAGTCTTTCAACTCTTTGACAATCTTTGTCTTCTGTCTTCGGGTAGAACTGTGTATTTCGGTCCTGCTTCTGCAGCCAATGAGTTTTTTGCTTCAAGTGGTTTCCCATGCCCAACTCTTCAAAATCCATCAGATCACTTCCTGAAGACCATAAACAAAGATTTTGAGCAGGACATTGAGAAAGGCATGGCTGGAACCACACCCGCAGAGGAAGCCATTGATACTCTAATAAAGTCTTACAAATCATCCGAAAATTATCACCAACTTCAAAGACATATAGCTGAACTACATAAGAAGGATTGTGAAGCATTAGAAAAGAGAAGCCCTAGATCCTTTGTGAATGCTGGCTTTGTCACACAATGTCTTGTACTTACAAGAAGATCCTTTGTGAACATGTACCGAGATCGAGGCTACTACTGGTTGCGCCTTTTCATCTACATAGCCTTAGCTGCCGGCCTAGGCACTATCTATTATGATCTTGGATACACTTATGCATCAATTCAGGCACGAGGCTCTCTACTAGCATTTGTGGCTTCATTTCTAACTTTCATGGCCATTGGTGGGTTTCCTTCCTTTGTGGAAGACATGAAGGTATTTGAACGTGAAAGACTGAATGGGCACTATGGTGTTAGTGCATTCGTCTTCGCCAACACATTTTCTTCGATGCCTTTGTTGATGTTGATTTCATTGATTCCTGGATCAATAACCTACTATCTTGCTGGACTTCACAGTGGATTTGAACAATTCTTCTACTTTGCCTCTGCACTATATGCCTGCATGATGCTGGTTGAGAGCCTAATGATGATAGTTGCGAGCATCGTGCCGAATTTCCTTATGGGCATAATAGTTGGTTCTGGATTGCAAGGGATTATGTTGTTATGCGGCGGATTCTTCCGGCTACCAAATGATCTTCCGGATCTTGTGTGGAAATACCCATTGTATCATATTGCCTTCCACAAGTATGCATTCCAGGGAATGTTTAAGAATGAATTTGAAGGAACAACGTTTCCGAATGATGATCAACTTAGAATCGGTAACTCTAAGTGGCTTAGTGGCGACAGCATTTTGAGAGATATATGGCATGTGGAAATGGGATACTCTAAATGGGTTGATCTTGGTGTCTTGCTAGGAATGATAGTTCTGTATCGAGCTTTGTTCTTAGTTATCATCAAGATCACTGAGAAAAGGAAAACTATTACCTTAGCTCTTCTGTCCGTGGCTCCGAAGCAAAGCATGCAAGTATTGGTGAATCCCTCCTCTACTCCATTGCATGGAGAGAGCCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

709

Amino Acids

78.71

Weight (kDa)

8.18

Isoelectric Point (pI)

46.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	94 - 245	6.9e-29	ABC transporter
ABC2_membrane_7	PF19055	277 - 333	8.8e-10	ABC-2 type transporter
ABC2_membrane	PF01061	400 - 612	9.3e-42	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011836)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28110 AT4G28110
fragaria_vesca	FvH4_6g44350 FvH4_6g44350 FvH4_6g44350
malus_domestica	MD00G1065700.v1.1 MD17G1086600.v1.1
prunus_persica	Prupe.3G227900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0161281
rosa_laevigata	RLG00000021275
rosa_multiflora	Rmu_ssc0000196.1_g000009
rosa_roxburghii	Rroxscaffold_2G00088950
rosa_rugosa	Rorug02G0487700 Rorug02G0487800
rosa_samantha	Rh2AG554500 Rh2BG567800 Rh2CG538300 Rh2DG577200
rosa_wichuraiana	Rw2G045880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2114
AccI	GTMKAC	3 cut(s)	34, 353, 513
AccII	CGCG	2 cut(s)	700, 749
AccIII	TCCGGA	1 cut(s)	1756
AciI	CCGC	6 cut(s)	657, 735, 749, 1047, 1725, 1728
AclI	AACGTT	1 cut(s)	1847
AclWI	GGATC	6 cut(s)	406, 632, 1167, 1218, 1549, 1767
AcoI	YGGCCR	2 cut(s)	658, 1395
AcsI	RAATTY	2 cut(s)	1669, 1832
AcuI	CTGAAG	2 cut(s)	864, 1007
AcyI	GRCGYC	1 cut(s)	752
AfaI	GTAC	2 cut(s)	1212, 1241
AfiI	CCNNNNNNNGG	6 cut(s)	231, 309, 734, 807, 1404, 2114
AflIII	ACRYGT	1 cut(s)	1236
AhdI	GACNNNNNGTC	1 cut(s)	547
AjnI	CCWGG	4 cut(s)	132, 307, 1537, 1812
AleI	CACNNNNGTG	1 cut(s)	1467
AloI	GAACNNNNNNTCC	6 cut(s)	370, 402, 1834, 1866, 1965, 1997
Alw21I	GWGCWC	1 cut(s)	577
Alw26I	GTCTC	1 cut(s)	373
AlwI	GGATC	6 cut(s)	406, 632, 1167, 1218, 1549, 1767
AlwNI	CAGNNNCTG	1 cut(s)	152
Aor13HI	TCCGGA	1 cut(s)	1756
AoxI	GGCC	4 cut(s)	646, 658, 1297, 1395
ApeKI	GCWGC	4 cut(s)	313, 529, 917, 1292
ApoI	RAATTY	2 cut(s)	1669, 1832
Asp700I	GAANNNNTTC	1 cut(s)	849
AspA2I	CCTAGG	1 cut(s)	1300
AspLEI	GCGC	2 cut(s)	749, 1269
AspS9I	GGNCC	2 cut(s)	332, 905
AsuHPI	GGTGA	4 cut(s)	221, 259, 1094, 2101
AvaII	GGWCC	2 cut(s)	332, 905
AvrII	CCTAGG	1 cut(s)	1300
BaeGI	GKGCMC	1 cut(s)	1464
BalI	TGGCCA	1 cut(s)	1397
BauI	CACGAG	2 cut(s)	619, 1350
BbsI	GAAGAC	5 cut(s)	866, 873, 995, 1431, 1477
Bbv12I	GWGCWC	1 cut(s)	577
BbvI	GCAGC	4 cut(s)	325, 516, 929, 1279
BccI	CCATC	5 cut(s)	137, 589, 833, 837, 979
BceAI	ACGGC	1 cut(s)	494
BcgI	CGANNNNNNTGC	2 cut(s)	1645, 1679
BciT130I	CCWGG	4 cut(s)	134, 309, 1539, 1814
BciVI	GTATCC	2 cut(s)	1319, 1931
BclI	TGATCA	1 cut(s)	1861
BcoDI	GTCTC	1 cut(s)	373
BfaI	CTAG	6 cut(s)	117, 837, 1170, 1301, 1364, 1970
BfmI	CTRYAG	3 cut(s)	204, 268, 915
BfuI	GTATCC	2 cut(s)	1319, 1931
BglI	GCCNNNNNGGC	1 cut(s)	654
BisI	GCNGC	7 cut(s)	314, 530, 658, 750, 918, 1293, 1726
BlnI	CCTAGG	1 cut(s)	1300
BlpI	GCTNAGC	1 cut(s)	525
BlsI	GCNGC	7 cut(s)	315, 531, 659, 751, 919, 1294, 1727
Bme1390I	CCNGG	4 cut(s)	134, 309, 1539, 1814
Bme18I	GGWCC	2 cut(s)	332, 905
BmeRI	GACNNNNNGTC	1 cut(s)	547
BmgT120I	GGNCC	2 cut(s)	332, 905
BmiI	GGNNCC	5 cut(s)	124, 333, 640, 1039, 2064
BmrFI	CCNGG	4 cut(s)	134, 309, 1539, 1814
BmsI	GCATC	7 cut(s)	34, 355, 598, 1346, 1497, 1614, 1668
BpiI	GAAGAC	5 cut(s)	866, 873, 995, 1431, 1477
BpmI	CTGGAG	3 cut(s)	119, 155, 174
Bpu10I	CCTNAGC	2 cut(s)	1288, 2044
Bpu1102I	GCTNAGC	1 cut(s)	525
Bsa29I	ATCGAT	1 cut(s)	42
BsaBI	GATNNNNATC	1 cut(s)	416
BsaHI	GRCGYC	1 cut(s)	752
BsaJI	CCNNGG	5 cut(s)	283, 308, 1300, 1813, 2058
BsaWI	WCCGGW	1 cut(s)	1756
BsaXI	ACNNNNNCTCC	2 cut(s)	370, 400
Bsc4I	CCNNNNNNNGG	6 cut(s)	231, 309, 734, 807, 1404, 2114
Bse118I	RCCGGY	1 cut(s)	1295
Bse1I	ACTGG	6 cut(s)	78, 102, 298, 444, 1265, 2125
Bse3DI	GCAATG	1 cut(s)	2108
Bse8I	GATNNNNATC	1 cut(s)	416
BseAI	TCCGGA	1 cut(s)	1756
BseBI	CCWGG	4 cut(s)	134, 309, 1539, 1814
BseCI	ATCGAT	1 cut(s)	42
BseDI	CCNNGG	5 cut(s)	283, 308, 1300, 1813, 2058
BseGI	GGATG	3 cut(s)	129, 825, 1088
BseJI	GATNNNNATC	1 cut(s)	416
BseLI	CCNNNNNNNGG	6 cut(s)	231, 309, 734, 807, 1404, 2114
BseMI	GCAATG	1 cut(s)	2108
BseMII	CTCAG	5 cut(s)	397, 534, 539, 664, 2013
BseNI	ACTGG	6 cut(s)	78, 102, 298, 444, 1265, 2125
BseRI	GAGGAG	3 cut(s)	135, 171, 2089
BseSI	GKGCMC	1 cut(s)	1464
BseXI	GCAGC	4 cut(s)	325, 516, 929, 1279
BsgI	GTGCAG	1 cut(s)	1590
Bsh1236I	CGCG	2 cut(s)	700, 749
BshFI	GGCC	4 cut(s)	648, 660, 1299, 1397
BshVI	ATCGAT	1 cut(s)	42
BsiHKAI	GWGCWC	1 cut(s)	577
BsiSI	CCGG	3 cut(s)	1296, 1738, 1757
BslI	CCNNNNNNNGG	6 cut(s)	231, 309, 734, 807, 1404, 2114
BsmAI	GTCTC	1 cut(s)	373
BsmI	GAATGC	3 cut(s)	1189, 1478, 1808
BsnI	GGCC	4 cut(s)	648, 660, 1299, 1397
Bsp1286I	GDGCHC	2 cut(s)	577, 1464
Bsp13I	TCCGGA	1 cut(s)	1756
Bsp1720I	GCTNAGC	1 cut(s)	525
BspACI	CCGC	6 cut(s)	657, 735, 749, 1047, 1725, 1728
BspANI	GGCC	4 cut(s)	648, 660, 1299, 1397
BspCNI	CTCAG	5 cut(s)	396, 533, 538, 663, 2014
BspDI	ATCGAT	1 cut(s)	42
BspEI	TCCGGA	1 cut(s)	1756
BspFNI	CGCG	2 cut(s)	700, 749
BspLI	GGNNCC	5 cut(s)	124, 333, 640, 1039, 2064
BspMAI	CTGCAG	1 cut(s)	919
BspPI	GGATC	6 cut(s)	406, 632, 1167, 1218, 1549, 1767
BspQI	GCTCTTC	1 cut(s)	2055
BsrDI	GCAATG	1 cut(s)	2108
BsrFI	RCCGGY	1 cut(s)	1295
BsrI	ACTGG	6 cut(s)	78, 102, 298, 444, 1265, 2125
BssAI	RCCGGY	1 cut(s)	1295
BssECI	CCNNGG	5 cut(s)	283, 308, 1300, 1813, 2058
BssNAI	GTATAC	1 cut(s)	514
BssNI	GRCGYC	1 cut(s)	752
BssSI	CACGAG	2 cut(s)	619, 1350
BssT1I	CCWWGG	2 cut(s)	283, 1300
Bst1107I	GTATAC	1 cut(s)	514
Bst2BI	CACGAG	2 cut(s)	619, 1350
Bst2UI	CCWGG	4 cut(s)	134, 309, 1539, 1814
Bst4CI	ACNGT	6 cut(s)	112, 148, 205, 499, 895, 1574
Bst6I	CTCTTC	5 cut(s)	363, 664, 719, 966, 2055
BstACI	GRCGYC	1 cut(s)	752
BstAPI	GCANNNNNTGC	2 cut(s)	1613, 2077
BstC8I	GCNNGC	6 cut(s)	737, 1189, 1297, 1618, 1657, 2078
BstDSI	CCRYGG	1 cut(s)	2058
BstEII	GGTNACC	1 cut(s)	68
BstENI	CCTNNNNNAGG	1 cut(s)	805
BstF5I	GGATG	3 cut(s)	129, 825, 1088
BstFNI	CGCG	2 cut(s)	700, 749
BstHHI	GCGC	2 cut(s)	749, 1269
BstMAI	GTCTC	1 cut(s)	373
BstNI	CCWGG	4 cut(s)	134, 309, 1539, 1814
BstNSI	RCATGY	3 cut(s)	1240, 1928, 2080
BstPI	GGTNACC	1 cut(s)	68
BstSCI	CCNGG	4 cut(s)	132, 307, 1537, 1812
BstSFI	CTRYAG	3 cut(s)	204, 268, 915
BstSLI	GKGCMC	1 cut(s)	1464
BstUI	CGCG	2 cut(s)	700, 749
BstV1I	GCAGC	4 cut(s)	325, 516, 929, 1279
BstV2I	GAAGAC	5 cut(s)	866, 873, 995, 1431, 1477
BstX2I	RGATCY	4 cut(s)	411, 1172, 1223, 1759
BstYI	RGATCY	4 cut(s)	411, 1172, 1223, 1759
BstZ17I	GTATAC	1 cut(s)	514
Bsu15I	ATCGAT	1 cut(s)	42
BsuI	GTATCC	2 cut(s)	1319, 1931
BsuRI	GGCC	4 cut(s)	648, 660, 1299, 1397
BsuTUI	ATCGAT	1 cut(s)	42
BtgI	CCRYGG	1 cut(s)	2058
BtsCI	GGATG	3 cut(s)	129, 825, 1088
BtsIMutI	CAGTG	4 cut(s)	437, 658, 1579, 2019
Cac8I	GCNNGC	6 cut(s)	737, 1189, 1297, 1618, 1657, 2078
CaiI	CAGNNNCTG	1 cut(s)	152
CfoI	GCGC	2 cut(s)	749, 1269
Cfr10I	RCCGGY	1 cut(s)	1295
Cfr13I	GGNCC	2 cut(s)	332, 905
ClaI	ATCGAT	1 cut(s)	42
CseI	GACGC	1 cut(s)	741
Csp6I	GTAC	2 cut(s)	1211, 1240
CspCI	CAANNNNNGTGG	2 cut(s)	224, 259
CviQI	GTAC	2 cut(s)	1211, 1240
DriI	GACNNNNNGTC	1 cut(s)	547
EaeI	YGGCCR	2 cut(s)	658, 1395
Eam1104I	CTCTTC	5 cut(s)	363, 664, 719, 966, 2055
Eam1105I	GACNNNNNGTC	1 cut(s)	547
EarI	CTCTTC	5 cut(s)	363, 664, 719, 966, 2055
EciI	GGCGGA	1 cut(s)	1743
Eco130I	CCWWGG	2 cut(s)	283, 1300
Eco147I	AGGCCT	1 cut(s)	648
Eco47I	GGWCC	2 cut(s)	332, 905
Eco57I	CTGAAG	2 cut(s)	864, 1007
Eco91I	GGTNACC	1 cut(s)	68
EcoNI	CCTNNNNNAGG	1 cut(s)	805
EcoO109I	RGGNCCY	1 cut(s)	332
EcoO65I	GGTNACC	1 cut(s)	68
EcoRII	CCWGG	4 cut(s)	132, 307, 1537, 1812
EcoT14I	CCWWGG	2 cut(s)	283, 1300
EcoT22I	ATGCAT	2 cut(s)	1339, 1810
ErhI	CCWWGG	2 cut(s)	283, 1300
FalI	AAGNNNNNCTT	2 cut(s)	698, 730
FauI	CCCGC	2 cut(s)	728, 1054
FauNDI	CATATG	1 cut(s)	460
FbaI	TGATCA	1 cut(s)	1861
FblI	GTMKAC	3 cut(s)	34, 353, 513
Fnu4HI	GCNGC	7 cut(s)	314, 530, 658, 750, 918, 1293, 1726
FokI	GGATG	3 cut(s)	116, 812, 1075
Fsp4HI	GCNGC	7 cut(s)	314, 530, 658, 750, 918, 1293, 1726
FspBI	CTAG	6 cut(s)	117, 837, 1170, 1301, 1364, 1970
GlaI	GCGC	2 cut(s)	748, 1268
GluI	GCNGC	7 cut(s)	314, 530, 658, 750, 918, 1293, 1726
GsuI	CTGGAG	3 cut(s)	119, 155, 174
HaeIII	GGCC	4 cut(s)	648, 660, 1299, 1397
HapII	CCGG	3 cut(s)	1296, 1738, 1757
HgaI	GACGC	1 cut(s)	741
HhaI	GCGC	2 cut(s)	749, 1269
Hin1I	GRCGYC	1 cut(s)	752
Hin6I	GCGC	2 cut(s)	747, 1267
HinP1I	GCGC	2 cut(s)	747, 1267
HincII	GTYRAC	1 cut(s)	35
HindII	GTYRAC	1 cut(s)	35
HindIII	AAGCTT	1 cut(s)	707
HinfI	GANTC	9 cut(s)	15, 103, 381, 542, 672, 1534, 1731, 1872, 2092
HpaII	CCGG	3 cut(s)	1296, 1738, 1757
HphI	GGTGA	4 cut(s)	221, 259, 1094, 2101
Hpy166II	GTNNAC	4 cut(s)	35, 354, 514, 1234
Hpy188I	TCNGA	8 cut(s)	170, 559, 629, 844, 976, 1093, 1854, 2067
Hpy188III	TCNNGA	5 cut(s)	362, 985, 1698, 1757, 2014
Hpy8I	GTNNAC	4 cut(s)	35, 354, 514, 1234
Hpy99I	CGWCG	1 cut(s)	36
HpyAV	CCTTC	7 cut(s)	251, 345, 1132, 1422, 1426, 1804, 1832
HpyCH4III	ACNGT	6 cut(s)	112, 148, 205, 499, 895, 1574
HpyCH4IV	ACGT	3 cut(s)	50, 1444, 1847
HpySE526I	ACGT	3 cut(s)	50, 1444, 1847
Hsp92I	GRCGYC	1 cut(s)	752
HspAI	GCGC	2 cut(s)	747, 1267
Kpn2I	TCCGGA	1 cut(s)	1756
KroI	GCCGGC	1 cut(s)	1295
KroNI	GCCGGC	1 cut(s)	1297
Ksp22I	TGATCA	1 cut(s)	1861
LguI	GCTCTTC	1 cut(s)	2055
LmnI	GCTCC	4 cut(s)	122, 158, 638, 2068
Lsp1109I	GCAGC	4 cut(s)	325, 516, 929, 1279
LweI	GCATC	7 cut(s)	34, 355, 598, 1346, 1497, 1614, 1668
MaeI	CTAG	6 cut(s)	117, 837, 1170, 1301, 1364, 1970
MaeII	ACGT	3 cut(s)	50, 1444, 1847
MaeIII	GTNAC	5 cut(s)	68, 463, 580, 1195, 1877
MflI	RGATCY	4 cut(s)	411, 1172, 1223, 1759
MhlI	GDGCHC	2 cut(s)	577, 1464
MlsI	TGGCCA	1 cut(s)	1397
MluCI	AATT	7 cut(s)	533, 774, 1096, 1341, 1586, 1669, 1832
MluNI	TGGCCA	1 cut(s)	1397
MlyI	GAGTC	3 cut(s)	375, 536, 681
MmeI	TCCRAC	1 cut(s)	537
Mox20I	TGGCCA	1 cut(s)	1397
Mph1103I	ATGCAT	2 cut(s)	1339, 1810
MroI	TCCGGA	1 cut(s)	1756
MroNI	GCCGGC	1 cut(s)	1295
MroXI	GAANNNNTTC	1 cut(s)	849
MscI	TGGCCA	1 cut(s)	1397
MseI	TTAA	3 cut(s)	200, 494, 1824
MslI	CAYNNNNRTG	4 cut(s)	24, 42, 1467, 1803
Msp20I	TGGCCA	1 cut(s)	1397
MspA1I	CMGCKG	1 cut(s)	529
MspI	CCGG	3 cut(s)	1296, 1738, 1757
MspR9I	CCNGG	4 cut(s)	134, 309, 1539, 1814
Mva1269I	GAATGC	3 cut(s)	1189, 1478, 1808
MvaI	CCWGG	4 cut(s)	134, 309, 1539, 1814
MvnI	CGCG	2 cut(s)	700, 749
NaeI	GCCGGC	1 cut(s)	1297
NdeI	CATATG	1 cut(s)	460
NgoMIV	GCCGGC	1 cut(s)	1295
NlaIV	GGNNCC	5 cut(s)	124, 333, 640, 1039, 2064
NmuCI	GTSAC	2 cut(s)	463, 1195
NsiI	ATGCAT	2 cut(s)	1339, 1810
NspI	RCATGY	3 cut(s)	1240, 1928, 2080
OliI	CACNNNNGTG	1 cut(s)	1467
PaeI	GCATGC	1 cut(s)	2080
PceI	AGGCCT	1 cut(s)	648
PciI	ACATGT	1 cut(s)	1236
PciSI	GCTCTTC	1 cut(s)	2055
PcsI	WCGNNNNNNNCGW	1 cut(s)	507
PctI	GAATGC	3 cut(s)	1189, 1478, 1808
PdiI	GCCGGC	1 cut(s)	1297
PdmI	GAANNNNTTC	1 cut(s)	849
PfeI	GAWTC	6 cut(s)	15, 103, 1534, 1731, 1872, 2092
PflMI	CCANNNNNTGG	1 cut(s)	2114
PfoI	TCCNGGA	2 cut(s)	132, 1537
PkrI	GCNGC	7 cut(s)	315, 531, 659, 751, 919, 1294, 1727
PleI	GAGTC	3 cut(s)	375, 536, 680
PpsI	GAGTC	3 cut(s)	375, 536, 680
PpuMI	RGGWCCY	1 cut(s)	332
PscI	ACATGT	1 cut(s)	1236
Psp1406I	AACGTT	1 cut(s)	1847
Psp5II	RGGWCCY	1 cut(s)	332
Psp6I	CCWGG	4 cut(s)	132, 307, 1537, 1812
PspEI	GGTNACC	1 cut(s)	68
PspGI	CCWGG	4 cut(s)	132, 307, 1537, 1812
PspN4I	GGNNCC	5 cut(s)	124, 333, 640, 1039, 2064
PspPI	GGNCC	2 cut(s)	332, 905
PspPPI	RGGWCCY	1 cut(s)	332
PstI	CTGCAG	1 cut(s)	919
PstNI	CAGNNNCTG	1 cut(s)	152
PsuI	RGATCY	4 cut(s)	411, 1172, 1223, 1759
PvuII	CAGCTG	1 cut(s)	529
RsaI	GTAC	2 cut(s)	1212, 1241
RsaNI	GTAC	2 cut(s)	1211, 1240
RseI	CAYNNNNRTG	4 cut(s)	24, 42, 1467, 1803
SalI	GTCGAC	1 cut(s)	33
SapI	GCTCTTC	1 cut(s)	2055
SaqAI	TTAA	3 cut(s)	200, 494, 1824
SatI	GCNGC	7 cut(s)	314, 530, 658, 750, 918, 1293, 1726
Sau96I	GGNCC	2 cut(s)	332, 905
SchI	GAGTC	3 cut(s)	375, 536, 681
ScrFI	CCNGG	4 cut(s)	134, 309, 1539, 1814
SduI	GDGCHC	2 cut(s)	577, 1464
SfaNI	GCATC	7 cut(s)	34, 355, 598, 1346, 1497, 1614, 1668
SfcI	CTRYAG	3 cut(s)	204, 268, 915
SinI	GGWCC	2 cut(s)	332, 905
SmiMI	CAYNNNNRTG	4 cut(s)	24, 42, 1467, 1803
SphI	GCATGC	1 cut(s)	2080
Sse9I	AATT	7 cut(s)	533, 774, 1096, 1341, 1586, 1669, 1832
SseBI	AGGCCT	1 cut(s)	648
SsiI	CCGC	6 cut(s)	657, 735, 749, 1047, 1725, 1728
SspMI	CTAG	6 cut(s)	117, 837, 1170, 1301, 1364, 1970
StuI	AGGCCT	1 cut(s)	648
StyD4I	CCNGG	4 cut(s)	132, 307, 1537, 1812
StyI	CCWWGG	2 cut(s)	283, 1300
TaaI	ACNGT	6 cut(s)	112, 148, 205, 499, 895, 1574
TaiI	ACGT	3 cut(s)	53, 1447, 1850
TaqI	TCGA	6 cut(s)	34, 42, 501, 1249, 1505, 1990
TaqII	GACCGA	1 cut(s)	893
TasI	AATT	7 cut(s)	533, 774, 1096, 1341, 1586, 1669, 1832
TatI	WGTACW	1 cut(s)	1210
TauI	GCSGC	3 cut(s)	660, 752, 1728
TfiI	GAWTC	6 cut(s)	15, 103, 1534, 1731, 1872, 2092
Tru1I	TTAA	3 cut(s)	200, 494, 1824
Tru9I	TTAA	3 cut(s)	200, 494, 1824
TscAI	CASTG	4 cut(s)	444, 658, 1579, 2026
TseFI	GTSAC	2 cut(s)	463, 1195
TseI	GCWGC	4 cut(s)	313, 529, 917, 1292
Tsp45I	GTSAC	2 cut(s)	463, 1195
TspDTI	ATGAA	9 cut(s)	75, 153, 629, 1264, 1368, 1381, 1445, 1518, 1845
TspGWI	ACGGA	2 cut(s)	20, 2047
TspRI	CASTG	4 cut(s)	444, 658, 1579, 2026
Van91I	CCANNNNNTGG	1 cut(s)	2114
VpaK11BI	GGWCC	2 cut(s)	332, 905
XagI	CCTNNNNNAGG	1 cut(s)	805
XapI	RAATTY	2 cut(s)	1669, 1832
XceI	RCATGY	3 cut(s)	1240, 1928, 2080
XcmI	CCANNNNNNNNNTGG	2 cut(s)	85, 290
XmaJI	CCTAGG	1 cut(s)	1300
XmiI	GTMKAC	3 cut(s)	34, 353, 513
XmnI	GAANNNNTTC	1 cut(s)	849
XspI	CTAG	6 cut(s)	117, 837, 1170, 1301, 1364, 1970
Zsp2I	ATGCAT	2 cut(s)	1339, 1810

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.