Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0015394

Physical Location & Seq

Genomic Coordinates Forward (+)

62973697 .. 62976795

Gene Structure 3099 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0497500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2961 bp

ATGTGGAGCTGCAAATGGAGATGCCACAATGGAAGGCTACAAATGAAGATGCCATCAAGTTGTATCATTATTTACTTCAAATTACAAACGCAGACACTTTGCCACGATGATGAGCGCTCTGCCTTGTTGCAACTCAAAGCTAGTTTCACTATAGACAAGTCTGCTTCCCAAGATCCCTCTGCTTATCCGAAAGTTGCACATTGGAGTAGGCTAGAAGGAGATCCTCAAAGGAGTAACTGTTGTTCATGGGATGGTGTTGAATGCAACCCCGATTCTGGCCATGTTGTCAGCCTTGACCTCGCCAGCAGCTATCTTCATGGTTCCATCAACTCCAATAGCAGTCTTTTTCAACTTGTTCAGTTGCAGGGGCTTGACCTCTCTGACAACAACTTCAGCTACTCTCAAATACCATCCAGGTTAGGCCATGATCTTACTAGTCTAACATATCTCAACCTTTCAATGTCTTCATTTTCTGGCCAAATTCCATCAGAAATTTCATATCTATCCAAGCTGTCTGCCCTTGATCTTTCTTCTACTTACGAGTCTCTGTCTTCTAGTTACGAGTCTCATCTCAAAATGGCCAACTTCGGAAGCCTAGTTCAAAACTTGACCAACATAAAGCAGCTTCATCTTAGTTTGGTAGAGATAGGCTCCACAGTTCCTAGTACATTGGTGAATGTGTCTTCTCTCACATCTCTCCGTCTTCAAGCATGTAACTTGGAGGGGCAATTCCCAGTAGGCATTTTCCGCCTACCAAACTTGCAAGTACTTGATTTGGCCGATAACGGCAATCTAAACGGTTACTTTCCTGATGAGCTTAACAAGAGCAGTCCCTTGAAGATACTGAATTTGCGGTCAACCAATTTCTCTGGTCATCTACCTGCTTCAATCGGAGACCTTCGTGCCTTAAATTTGTTGAACATAGCACACTGTAACTTTTATCCCCATGTTCCATCTTCACTTTCCAACCTTACCCAGCTCAATTTCCTTGATCTTTCCTTTTTTTCCAACAAGGATACTTTCAGTGGCCAAGTTACTGATTCCTGGTCTTGGGTTGGAAAGCTGACCAAACTTAACTATTTGTCCCTTGTTGATACCAACTTAAGGGGAGATTTCCCATGTTTTTTGGCTAATCTGACGCAACTTGTGGAATTAGACTTGAGCCACAATCAAATAACTGGTGAAATCCCATCTTGCCTTGGGCAGTTGACCCATTTAACTTTATTAGACGCAGGATTCAACAATCTGCAAGGAACGATTCCCAGGTCACTATTCGAGCTTAGAAATCTTGAATATATATACCTCGACTCAAATAACTTGAGTGGGTATGTTGAATTCGATGAGTTTTCCAAGCTCGAAAAGTTGAGGGTACTTTGTTTGTCGCTCAACAAGTTATCTGTGCAGATCAAAACTGGATTTACTGCTATTCCTCCAAAGCTTCAAGTACTAGGATTGGGTTCATGCAACTTAACAGAGTTTCCGGAATTTTTGAAATACACTAGTGAACTGACGGGTCTAGATCTAGCTGAGAACAATCTTCACGGCCAAATACCAAAATGGATGTGGAATTCAGCTAGTGAAACTTTGTCGAATCTGAACCTCTCTCACAACCACTTCACTGGATTTGAAGAAAATCCAGTCATCATTCCATGGCCTCGGTTAGATTCTTTAGAGCTCGACTCTAACATGTTACGAGGATCATTGCCAATTCCAGGGCCGTCAATGGAAGTCTATTCTGTTTCAAACAATGAATACGCAGGAGAAATTCCAGCAACATTCTGCAACGTGGGGGCGCTAACTATTCTTGATCTTTCTAACAACAACCTGAATGGCATGATTCCCCAATGTTTTGAGAATCTCACAGATCTTTACATATTGAAACTGCAGAACAATTCTTTTCACGGGGATATTCCTCGAATAGGTTCAAACGGATGCTTGAGGTTAAGAGGGATTGACTTGAGTTATAATCAGCTACAAGGGAAGCTACCAAGATCAATTGTCAATTGTCCTGAGTTGATGTTTCTTAATTTGAGAAATAATCAGATCAGTGATACCTTCCCCTTTTGGTTAGGAGTGCTTCAACAATTAAAAGTTCTCATTTTGGGGTCTAATGCATTTCATGGCATAATTGGAATGCCTGCAAGTAGCCATGAGTTCCCTGAGCTGTCCATTGTTGATTTATCTAGCAATGATTTTTCAGGTATGTTGCCCTCCAACTACTTAGAGAACTGGAATGCCATGAAATATGCTGTTGTAAACGAGCAAATATACGTCAATTCCCCTTACAACGAGGAATATGCAGGAGTGTACTACTATGATTACCCGATTACAGTTTTTAGCAAAGGTCGTGAATTGAAGTATGTCAAGACCCCTTATCTTCTGAGACTCGTAGACTTCTCAAGTAACAGATTTCAAGGAGAGATCCCAGGTATCATTGGGAACCTAAGAGGGCTTCATTTGCTTAATCTTTCCAACAACACTCTCACTGGTCTCATCCCCTATTCTTTGGGGAATTTGAGTGCTCTTGAATCGTTGGATCTCTCCCAAAATCAGCTCTCAGGAAAGCTCCCCGGTGATCTAGCACAACTGACATTCCTTTCATACTTTAATGTATCCCATAATCGTCTTTCGGGGTCCATTCCACAAGGTCGACAATTTGATACATTCCAAGAGGATATGTACCAAGGAAACTCAGGTTTGTGTGGAAAACCTTTGCCAAAGAAATGTGAAGATTCTGAGAGCACAACACCACAAACATCAAGCTTTGAACAAGACGAAGACTCTGGATTTCGAATTGAACTAGATTGGTTTGTGGTTCTGCCAGGAGTTGTTGCTGGTCTAATAGTTGGAGTAGTTGGAGGGGACTTTTGGACAACCAAGAAGCATGACTGGTTTGTAGAGACATTCAGCAGGAGGAGGCGGCTGAGAGGCATAAGGCAATGGAGGGGACTCAGAACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006807 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009543 GO:0009579 GO:0009628 GO:0009642 GO:0009765 GO:0009987 GO:0010206 GO:0015979 GO:0016020 GO:0019538 GO:0019684 GO:0030091 GO:0031976 GO:0031977 GO:0031978 GO:0031984 GO:0034357 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051716 GO:0055035 GO:0071214 GO:0071478 GO:0071482 GO:0071484 GO:0071704 GO:0104004 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00195 ko01100 map00195 map01100

Pfam Domains

Protein Families

PSII_Pbs27

Protein Analysis

986

Amino Acids

110.18

Weight (kDa)

5.49

Isoelectric Point (pI)

40.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	35 - 89	2.4e-07	Leucine rich repeat N-terminal domain
LRR_14	PF23598	252 - 332	1.4e-09	Leucine-rich repeat region
LRR_14	PF23598	349 - 538	9.7e-14	Leucine-rich repeat region
LRR_8	PF13855	357 - 416	3.3e-06	Leucine rich repeat
LRR_8	PF13855	590 - 632	7.7e-06	Leucine rich repeat
LRR_8	PF13855	623 - 682	1.6e-06	Leucine rich repeat
LRR_8	PF13855	794 - 852	1e-07	Leucine rich repeat
LRR_8	PF13855	816 - 876	1.4e-08	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015394)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03600
fragaria_vesca	FvH4_6g45050
malus_domestica	MD09G1090500.v1.1 MD17G1079700.v1.1
prunus_persica	Prupe.3G235100_v2.0.a1
pyrus_communis	pycom09g01520
rosa_chinensis	RchiOBHm_Chr2g0162381
rosa_laevigata	RLG00000021342
rosa_multiflora	Rmu_sc0004020.1_g000007
rosa_roxburghii	Rroxscaffold_2G00087970
rosa_rugosa	Rorug02G0497500
rosa_samantha	Rh2AG563400 Rh2BG575900 Rh2CG546200 Rh2DG586100
rosa_wichuraiana	Rw2G046620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1965
Acc36I	ACCTGC	1 cut(s)	889
AccI	GTMKAC	2 cut(s)	2391, 2650
AccIII	TCCGGA	1 cut(s)	1480
AciI	CCGC	3 cut(s)	748, 853, 2920
AclWI	GGATC	5 cut(s)	167, 215, 1705, 2416, 2544
AcoI	YGGCCR	6 cut(s)	277, 475, 579, 777, 1027, 1543
AcsI	RAATTY	9 cut(s)	480, 492, 847, 910, 1334, 1484, 1567, 1764, 2512
AcuI	CTGAAG	1 cut(s)	376
AfaI	GTAC	6 cut(s)	667, 768, 1371, 1446, 2309, 2681
AfeI	AGCGCT	1 cut(s)	116
AfiI	CCNNNNNNNGG	5 cut(s)	275, 1050, 1104, 1712, 1919
AflII	CTTAAG	1 cut(s)	1102
AflIII	ACRYGT	1 cut(s)	1686
AhlI	ACTAGT	2 cut(s)	434, 1499
AjnI	CCWGG	6 cut(s)	413, 1043, 1262, 1711, 2425, 2821
AloI	GAACNNNNNNTCC	2 cut(s)	582, 614
Alw21I	GWGCWC	3 cut(s)	1677, 2524, 2744
Alw26I	GTCTC	6 cut(s)	549, 570, 888, 2377, 2495, 2894
AlwI	GGATC	5 cut(s)	167, 215, 1705, 2416, 2544
Aor13HI	TCCGGA	1 cut(s)	1480
Aor51HI	AGCGCT	1 cut(s)	116
AoxI	GGCC	9 cut(s)	277, 421, 475, 579, 777, 1027, 1543, 1652, 1715
ApeKI	GCWGC	3 cut(s)	9, 306, 622
ApoI	RAATTY	9 cut(s)	480, 492, 847, 910, 1334, 1484, 1567, 1764, 2512
Asp700I	GAANNNNTTC	1 cut(s)	1921
AspLEI	GCGC	2 cut(s)	117, 1795
AspS9I	GGNCC	2 cut(s)	1715, 2634
AsuC2I	CCSGG	1 cut(s)	2571
AsuHPI	GGTGA	3 cut(s)	685, 1193, 2585
AsuII	TTCGAA	1 cut(s)	2791
AvaII	GGWCC	1 cut(s)	2634
BalI	TGGCCA	4 cut(s)	279, 477, 581, 1029
BanII	GRGCYC	1 cut(s)	1677
BbsI	GAAGAC	5 cut(s)	456, 543, 675, 695, 2784
Bbv12I	GWGCWC	3 cut(s)	1677, 2524, 2744
BbvI	GCAGC	2 cut(s)	318, 634
BccI	CCATC	7 cut(s)	61, 245, 332, 418, 493, 961, 1198
BceAI	ACGGC	3 cut(s)	802, 1558, 1702
BcgI	CGANNNNNNTGC	2 cut(s)	2279, 2313
BciT130I	CCWGG	6 cut(s)	415, 1045, 1264, 1713, 2427, 2823
BciVI	GTATCC	2 cut(s)	1009, 2623
BcnI	CCSGG	1 cut(s)	2571
BcoDI	GTCTC	6 cut(s)	549, 570, 888, 2377, 2495, 2894
BcuI	ACTAGT	2 cut(s)	434, 1499
BfmI	CTRYAG	2 cut(s)	150, 1883
BfoI	RGCGCY	2 cut(s)	118, 1796
BfrI	CTTAAG	1 cut(s)	1102
BfuAI	ACCTGC	1 cut(s)	889
BfuI	GTATCC	2 cut(s)	1009, 2623
BglII	AGATCT	2 cut(s)	1519, 1864
BisI	GCNGC	4 cut(s)	10, 307, 623, 2921
BlsI	GCNGC	4 cut(s)	11, 308, 624, 2922
BmcAI	AGTACT	2 cut(s)	768, 1446
Bme1390I	CCNGG	7 cut(s)	415, 1045, 1264, 1713, 2427, 2571, 2823
Bme18I	GGWCC	1 cut(s)	2634
BmgT120I	GGNCC	2 cut(s)	1715, 2634
BmiI	GGNNCC	4 cut(s)	322, 652, 2441, 2635
BmrFI	CCNGG	7 cut(s)	415, 1045, 1264, 1713, 2427, 2571, 2823
BmrI	ACTGGG	1 cut(s)	728
BmsI	GCATC	3 cut(s)	11, 39, 1922
BmuI	ACTGGG	1 cut(s)	728
BpiI	GAAGAC	5 cut(s)	456, 543, 675, 695, 2784
BplI	GAGNNNNNCTC	4 cut(s)	635, 667, 1664, 1696
Bpu10I	CCTNAGC	1 cut(s)	2160
Bpu14I	TTCGAA	1 cut(s)	2791
BpuEI	CTTGAG	5 cut(s)	1180, 1339, 1957, 1978, 2383
BpuMI	CCSGG	1 cut(s)	2571
BsaI	GGTCTC	2 cut(s)	888, 2495
BsaJI	CCNNGG	8 cut(s)	1198, 1262, 1649, 1655, 1712, 2425, 2569, 2683
BsaWI	WCCGGW	1 cut(s)	1480
BsaXI	ACNNNNNCTCC	2 cut(s)	223, 253
Bsc4I	CCNNNNNNNGG	5 cut(s)	275, 1050, 1104, 1712, 1919
Bse1I	ACTGG	8 cut(s)	734, 1183, 1417, 1624, 1637, 2234, 2491, 2894
Bse3DI	GCAATG	3 cut(s)	1700, 2194, 2945
BseAI	TCCGGA	1 cut(s)	1480
BseBI	CCWGG	6 cut(s)	415, 1045, 1264, 1713, 2427, 2823
BseDI	CCNNGG	8 cut(s)	1198, 1262, 1649, 1655, 1712, 2425, 2569, 2683
BseGI	GGATG	5 cut(s)	256, 410, 1566, 1937, 2493
BseLI	CCNNNNNNNGG	5 cut(s)	275, 1050, 1104, 1712, 1919
BseMI	GCAATG	3 cut(s)	1700, 2194, 2945
BseMII	CTCAG	8 cut(s)	1518, 2001, 2151, 2372, 2571, 2706, 2727, 2915
BseNI	ACTGG	8 cut(s)	734, 1183, 1417, 1624, 1637, 2234, 2491, 2894
BseRI	GAGGAG	1 cut(s)	2929
BseXI	GCAGC	2 cut(s)	318, 634
BseYI	CCCAGC	1 cut(s)	975
BsgI	GTGCAG	1 cut(s)	1421
BshFI	GGCC	9 cut(s)	279, 423, 477, 581, 779, 1029, 1545, 1654, 1717
BsiHKAI	GWGCWC	3 cut(s)	1677, 2524, 2744
BsiSI	CCGG	2 cut(s)	1481, 2571
BslFI	GGGAC	3 cut(s)	816, 1069, 2876
BslI	CCNNNNNNNGG	5 cut(s)	275, 1050, 1104, 1712, 1919
BsmAI	GTCTC	6 cut(s)	549, 570, 888, 2377, 2495, 2894
BsmFI	GGGAC	3 cut(s)	816, 1069, 2876
BsmI	GAATGC	3 cut(s)	266, 2139, 2239
BsnI	GGCC	9 cut(s)	279, 423, 477, 581, 779, 1029, 1545, 1654, 1717
Bso31I	GGTCTC	2 cut(s)	888, 2495
Bsp119I	TTCGAA	1 cut(s)	2791
Bsp1286I	GDGCHC	3 cut(s)	1677, 2524, 2744
Bsp13I	TCCGGA	1 cut(s)	1480
Bsp19I	CCATGG	1 cut(s)	1649
BspACI	CCGC	3 cut(s)	748, 853, 2920
BspANI	GGCC	9 cut(s)	279, 423, 477, 581, 779, 1029, 1545, 1654, 1717
BspCNI	CTCAG	8 cut(s)	1519, 2002, 2152, 2373, 2570, 2705, 2728, 2916
BspEI	TCCGGA	1 cut(s)	1480
BspLI	GGNNCC	4 cut(s)	322, 652, 2441, 2635
BspMAI	CTGCAG	1 cut(s)	1887
BspMI	ACCTGC	1 cut(s)	889
BspPI	GGATC	5 cut(s)	167, 215, 1705, 2416, 2544
BspT104I	TTCGAA	1 cut(s)	2791
BspTI	CTTAAG	1 cut(s)	1102
BspTNI	GGTCTC	2 cut(s)	888, 2495
BsrDI	GCAATG	3 cut(s)	1700, 2194, 2945
BsrI	ACTGG	8 cut(s)	734, 1183, 1417, 1624, 1637, 2234, 2491, 2894
BssECI	CCNNGG	8 cut(s)	1198, 1262, 1649, 1655, 1712, 2425, 2569, 2683
BssT1I	CCWWGG	3 cut(s)	1198, 1649, 2683
Bst2UI	CCWGG	6 cut(s)	415, 1045, 1264, 1713, 2427, 2823
Bst4CI	ACNGT	5 cut(s)	239, 658, 800, 932, 2332
BstAFI	CTTAAG	1 cut(s)	1102
BstBI	TTCGAA	1 cut(s)	2791
BstC8I	GCNNGC	2 cut(s)	304, 2139
BstDSI	CCRYGG	1 cut(s)	1649
BstENI	CCTNNNNNAGG	1 cut(s)	1917
BstF5I	GGATG	5 cut(s)	256, 410, 1566, 1937, 2493
BstH2I	RGCGCY	2 cut(s)	118, 1796
BstHHI	GCGC	2 cut(s)	117, 1795
BstMAI	GTCTC	6 cut(s)	549, 570, 888, 2377, 2495, 2894
BstMWI	GCNNNNNNNGC	2 cut(s)	747, 2458
BstNI	CCWGG	6 cut(s)	415, 1045, 1264, 1713, 2427, 2823
BstNSI	RCATGY	2 cut(s)	714, 1690
BstSCI	CCNGG	7 cut(s)	413, 1043, 1262, 1711, 2425, 2569, 2821
BstSFI	CTRYAG	2 cut(s)	150, 1883
BstV1I	GCAGC	2 cut(s)	318, 634
BstV2I	GAAGAC	5 cut(s)	456, 543, 675, 695, 2784
BstX2I	RGATCY	6 cut(s)	172, 220, 1519, 1864, 2421, 2536
BstXI	CCANNNNNNTGG	1 cut(s)	1619
BstYI	RGATCY	6 cut(s)	172, 220, 1519, 1864, 2421, 2536
BsuI	GTATCC	2 cut(s)	1009, 2623
BsuRI	GGCC	9 cut(s)	279, 423, 477, 581, 779, 1029, 1545, 1654, 1717
BtgI	CCRYGG	1 cut(s)	1649
BtsCI	GGATG	5 cut(s)	256, 410, 1566, 1937, 2493
BtsIMutI	CAGTG	5 cut(s)	928, 1030, 1617, 2053, 2484
BveI	ACCTGC	1 cut(s)	889
Cac8I	GCNNGC	2 cut(s)	304, 2139
CfoI	GCGC	2 cut(s)	117, 1795
Cfr13I	GGNCC	2 cut(s)	1715, 2634
CseI	GACGC	2 cut(s)	1147, 1238
Csp6I	GTAC	6 cut(s)	666, 767, 1370, 1445, 2308, 2680
CviQI	GTAC	6 cut(s)	666, 767, 1370, 1445, 2308, 2680
EaeI	YGGCCR	6 cut(s)	277, 475, 579, 777, 1027, 1543
EciI	GGCGGA	1 cut(s)	737
Ecl136II	GAGCTC	1 cut(s)	1675
Eco130I	CCWWGG	3 cut(s)	1198, 1649, 2683
Eco24I	GRGCYC	1 cut(s)	1677
Eco31I	GGTCTC	2 cut(s)	888, 2495
Eco47I	GGWCC	1 cut(s)	2634
Eco47III	AGCGCT	1 cut(s)	116
Eco53kI	GAGCTC	1 cut(s)	1675
Eco57I	CTGAAG	1 cut(s)	376
EcoICRI	GAGCTC	1 cut(s)	1675
EcoNI	CCTNNNNNAGG	1 cut(s)	1917
EcoRI	GAATTC	2 cut(s)	1334, 1567
EcoRII	CCWGG	6 cut(s)	413, 1043, 1262, 1711, 2425, 2821
EcoT14I	CCWWGG	3 cut(s)	1198, 1649, 2683
EcoT22I	ATGCAT	1 cut(s)	2116
EcoT38I	GRGCYC	1 cut(s)	1677
ErhI	CCWWGG	3 cut(s)	1198, 1649, 2683
FaqI	GGGAC	3 cut(s)	816, 1069, 2876
FblI	GTMKAC	2 cut(s)	2391, 2650
Fnu4HI	GCNGC	4 cut(s)	10, 307, 623, 2921
FokI	GGATG	5 cut(s)	263, 397, 1573, 1944, 2480
FriOI	GRGCYC	1 cut(s)	1677
Fsp4HI	GCNGC	4 cut(s)	10, 307, 623, 2921
GlaI	GCGC	2 cut(s)	116, 1794
GluI	GCNGC	4 cut(s)	10, 307, 623, 2921
GsaI	CCCAGC	1 cut(s)	979
HaeII	RGCGCY	2 cut(s)	118, 1796
HaeIII	GGCC	9 cut(s)	279, 423, 477, 581, 779, 1029, 1545, 1654, 1717
HapII	CCGG	2 cut(s)	1481, 2571
HgaI	GACGC	2 cut(s)	1147, 1238
HhaI	GCGC	2 cut(s)	117, 1795
Hin6I	GCGC	2 cut(s)	115, 1793
HinP1I	GCGC	2 cut(s)	115, 1793
HincII	GTYRAC	3 cut(s)	858, 1209, 2651
HindII	GTYRAC	3 cut(s)	858, 1209, 2651
HindIII	AAGCTT	2 cut(s)	1436, 2761
HpaII	CCGG	2 cut(s)	1481, 2571
HphI	GGTGA	3 cut(s)	685, 1193, 2585
Hpy166II	GTNNAC	7 cut(s)	858, 1209, 1505, 2257, 2308, 2392, 2651
Hpy8I	GTNNAC	7 cut(s)	858, 1209, 1505, 2257, 2308, 2392, 2651
HpyAV	CCTTC	4 cut(s)	27, 209, 908, 2065
HpyCH4III	ACNGT	5 cut(s)	239, 658, 800, 932, 2332
HpyCH4IV	ACGT	2 cut(s)	1785, 2271
HpyF10VI	GCNNNNNNNGC	2 cut(s)	747, 2458
HpySE526I	ACGT	2 cut(s)	1785, 2271
HspAI	GCGC	2 cut(s)	115, 1793
Kpn2I	TCCGGA	1 cut(s)	1480
LmnI	GCTCC	3 cut(s)	6, 656, 2571
Lsp1109I	GCAGC	2 cut(s)	318, 634
LweI	GCATC	3 cut(s)	11, 39, 1922
MaeII	ACGT	2 cut(s)	1785, 2271
MaeIII	GTNAC	9 cut(s)	233, 557, 713, 800, 932, 1033, 1266, 1689, 2402
MfeI	CAATTG	2 cut(s)	1995, 2002
MflI	RGATCY	6 cut(s)	172, 220, 1519, 1864, 2421, 2536
MhlI	GDGCHC	3 cut(s)	1677, 2524, 2744
MlsI	TGGCCA	4 cut(s)	279, 477, 581, 1029
MluNI	TGGCCA	4 cut(s)	279, 477, 581, 1029
MlyI	GAGTC	7 cut(s)	551, 572, 1301, 1673, 2379, 2774, 2943
MmeI	TCCRAC	8 cut(s)	990, 1032, 1036, 2238, 2496, 2514, 2827, 2836
Mox20I	TGGCCA	4 cut(s)	279, 477, 581, 1029
Mph1103I	ATGCAT	1 cut(s)	2116
MroI	TCCGGA	1 cut(s)	1480
MroXI	GAANNNNTTC	1 cut(s)	1921
MscI	TGGCCA	4 cut(s)	279, 477, 581, 1029
MslI	CAYNNNNRTG	1 cut(s)	108
Msp20I	TGGCCA	4 cut(s)	279, 477, 581, 1029
MspCI	CTTAAG	1 cut(s)	1102
MspI	CCGG	2 cut(s)	1481, 2571
MspR9I	CCNGG	7 cut(s)	415, 1045, 1264, 1713, 2427, 2571, 2823
MunI	CAATTG	2 cut(s)	1995, 2002
Mva1269I	GAATGC	3 cut(s)	266, 2139, 2239
MvaI	CCWGG	6 cut(s)	415, 1045, 1264, 1713, 2427, 2823
MwoI	GCNNNNNNNGC	2 cut(s)	747, 2458
NciI	CCSGG	1 cut(s)	2571
NcoI	CCATGG	1 cut(s)	1649
NlaIV	GGNNCC	4 cut(s)	322, 652, 2441, 2635
NmuCI	GTSAC	1 cut(s)	1266
NsiI	ATGCAT	1 cut(s)	2116
NspI	RCATGY	2 cut(s)	714, 1690
NspV	TTCGAA	1 cut(s)	2791
PciI	ACATGT	1 cut(s)	1686
PctI	GAATGC	3 cut(s)	266, 2139, 2239
PdmI	GAANNNNTTC	1 cut(s)	1921
PkrI	GCNGC	4 cut(s)	11, 308, 624, 2922
PleI	GAGTC	7 cut(s)	550, 571, 1301, 1673, 2379, 2774, 2943
PpsI	GAGTC	7 cut(s)	550, 571, 1301, 1673, 2379, 2774, 2943
PscI	ACATGT	1 cut(s)	1686
PsiI	TTATAA	1 cut(s)	1965
Psp124BI	GAGCTC	1 cut(s)	1677
Psp6I	CCWGG	6 cut(s)	413, 1043, 1262, 1711, 2425, 2821
PspFI	CCCAGC	1 cut(s)	975
PspGI	CCWGG	6 cut(s)	413, 1043, 1262, 1711, 2425, 2821
PspN4I	GGNNCC	4 cut(s)	322, 652, 2441, 2635
PspPI	GGNCC	2 cut(s)	1715, 2634
PsrI	GAACNNNNNNTAC	2 cut(s)	226, 258
PstI	CTGCAG	1 cut(s)	1887
PsuI	RGATCY	6 cut(s)	172, 220, 1519, 1864, 2421, 2536
RsaI	GTAC	6 cut(s)	667, 768, 1371, 1446, 2309, 2681
RsaNI	GTAC	6 cut(s)	666, 767, 1370, 1445, 2308, 2680
RseI	CAYNNNNRTG	1 cut(s)	108
SacI	GAGCTC	1 cut(s)	1677
SalI	GTCGAC	1 cut(s)	2649
SatI	GCNGC	4 cut(s)	10, 307, 623, 2921
Sau96I	GGNCC	2 cut(s)	1715, 2634
ScaI	AGTACT	2 cut(s)	768, 1446
SchI	GAGTC	7 cut(s)	551, 572, 1301, 1673, 2379, 2774, 2943
ScrFI	CCNGG	7 cut(s)	415, 1045, 1264, 1713, 2427, 2571, 2823
SduI	GDGCHC	3 cut(s)	1677, 2524, 2744
SfaNI	GCATC	3 cut(s)	11, 39, 1922
SfcI	CTRYAG	2 cut(s)	150, 1883
SfuI	TTCGAA	1 cut(s)	2791
SinI	GGWCC	1 cut(s)	2634
SmiMI	CAYNNNNRTG	1 cut(s)	108
SmlI	CTYRAG	6 cut(s)	1102, 1159, 1318, 1936, 1957, 2398
SmoI	CTYRAG	6 cut(s)	1102, 1159, 1318, 1936, 1957, 2398
SpeI	ACTAGT	2 cut(s)	434, 1499
SsiI	CCGC	3 cut(s)	748, 853, 2920
SstI	GAGCTC	1 cut(s)	1677
StyD4I	CCNGG	7 cut(s)	413, 1043, 1262, 1711, 2425, 2569, 2821
StyI	CCWWGG	3 cut(s)	1198, 1649, 2683
TaaI	ACNGT	5 cut(s)	239, 658, 800, 932, 2332
TaiI	ACGT	2 cut(s)	1788, 2274
TaqI	TCGA	9 cut(s)	1275, 1305, 1338, 1356, 1589, 1677, 1915, 2650, 2791
TatI	WGTACW	4 cut(s)	665, 766, 1444, 2307
TauI	GCSGC	1 cut(s)	2923
TscAI	CASTG	5 cut(s)	935, 1030, 1624, 2053, 2491
TseFI	GTSAC	1 cut(s)	1266
TseI	GCWGC	3 cut(s)	9, 306, 622
Tsp45I	GTSAC	1 cut(s)	1266
TspGWI	ACGGA	2 cut(s)	689, 1944
TspRI	CASTG	5 cut(s)	935, 1030, 1624, 2053, 2491
Vha464I	CTTAAG	1 cut(s)	1102
VpaK11BI	GGWCC	1 cut(s)	2634
XagI	CCTNNNNNAGG	1 cut(s)	1917
XapI	RAATTY	9 cut(s)	480, 492, 847, 910, 1334, 1484, 1567, 1764, 2512
XbaI	TCTAGA	1 cut(s)	1516
XceI	RCATGY	2 cut(s)	714, 1690
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1560
XmiI	GTMKAC	2 cut(s)	2391, 2650
XmnI	GAANNNNTTC	1 cut(s)	1921
ZrmI	AGTACT	2 cut(s)	768, 1446
Zsp2I	ATGCAT	1 cut(s)	2116

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.