Rorug02G0548000

Pyridoxamine 5'-phosphate oxidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0006888
Physical Location & Seq
Reverse (-)
67580664 .. 67583994
3331 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0548000.1

Sequence Viewer

Length: 2157 bp
ATGGTAGGGTTCACCCCTGAAGTAGACCTCGATCAAGCTTCAAGGCTCAAGCTTTCAAAGGACCCCCCTGACGCCGTTGATCCCAGACCCATCGACTTGTCCTTTGTAGATTCCTTGTTGGATTTCGACTCCATTGAGACTTGGTTCAGGGATTTTCCAAACCCAGATATGGCCGAGGCTGGGACGACGACTGTGGTGAAATCCGAGCCAATTGACTGTGAGCCTGGTTCTGCGGTGGAGGTGAAGTCTGAGGTAGGTGGTGGAGGCCAATTCGTTAATGGGTCTGACCCAATTGATTGTGGGCCTGGTGGTGTGGTGAAGGTGAAGTCTGAAGTTTCAGAAAATTTGAGGAGTTCTATTGAGGAAGAGTTGGGGAAGGTTAGTTTGGTTGGAGGGAATGAAGAAAGTTCCGTTCTTGGATTGAGTGAGGATTTGGAGACCAAAATTGGAGGTGTGGAGAGCAAAATGGAGAGTGGGAAAGAGAGCGAAAGTTCGGAGTCGGAGAGTGAGAGTTCATCAGCAGCATCATCTTCTTCGAGTAGTAGCTCTAGTGATGAGGAGGAGGAGAGAGAGAGTGATGATATGGATGAGGAGAAGGATGGAGAAGGGAATGTGAAGGCGGAGGCGGAGAAGGAGGGCAATGAGGAGGCTTGTGAACTTGAAGAAGGTGAGATAAGTGGTGCAGAGCAGATAGGTAATGGAAGTGGTGATGAGGACGATGAGGAGGGCGCCGAGGTTGCGTGGAGTGATGTTGATATTTTCGATGAGGGAGACGAGGAAGAGGAAGCTATAAAAGGTCCCATTCGTTCCAAAAATGAGCTCGAGGAACTTCCACCAGTTCCTCCAGTTAATGCGACCTTGGAACCACATCATCAAATGCTGCCTGTCGGAGTTGTTTTATCGGTTGTTGGTACCAAAGTCATTGTAGAAGGGGTTGAGAAGCACAACCCTCTGAACGAGGGTTCTATTCTGTGGATAACTGAAAGCAGGTCTCCGTTGGGACTGGTAGATGAAATTTTTGGACCTGTCATAAACCCTTACTATATGGTGAGATACAATACAGAAAGTGAAATCCCTGCCGGTATAGAAGTTGGAACACCAATCTCTTTTGTTCAGGAGTTTGCAGATCATGTGCTCAATAACAAAGATCTTTACAGAAAGGGTTATGATGCATCTGGTGCAAATGATGAAGAGGTATCAGATGAAGCAGAATTTTCAGATGATGAAAAAGAAGCTGAATACAAGAGACTGCAAAAAATGACAAAGAGGGGAATGAATGACCAGAATGCCGGCAGTAAGAAAAACAACAGAAAAAGAGGTAAAAATAAGATCGGTCCCTGGAAAAATGGTCAATCTTCACCCCAGCAAACACCTCCCGATCAACACCATGAACATTTCTCTTCAGCTGCACCTGCTCGTCGTTATGGTCCATCTTCTTCTGCCGTCTCAGAAGGTTTGGTTAGTGGGCGAGGATCAGTTCGACCATTTCCAGGTGCTACACAGGCCACTGGTAACGCAAATGGGGTTTGGTCAAATGGAATGGCATGTCAGCCACAGCAAACACCCTTCCCTAATGCATTTCCAAATAATAATATGCCATTTTTTCCACAGTACCCTCATCAGATGTCTATGCCGGGCGGAATTCCATTCCATCAGCAGGCAAATGTATTTTCTGGACCCATGGGTTCACAAGGGATGATGGGTCAACTTGGCTTCCACCAACCAGCATTTGGAGTAGGTTTCCAGGGACAACCTACACCAGGTCAGCAGTTGAATTCCTTTCCAGGACCCATGAATGCATTTGGGATGAGTCAACAGGGGTTCAACCAAAATGCATTTGGGATGGGTCAACAGGGATTCAACCCAAATGTTTTTGGGGTAGGTCAACAGGGTCAACATGGCTTCAACCCAAATGCGTTTGCGATGGTTCAACAGGGTCAGCATGGCTTCAACCAAAATACATTCGGGATAGGCTCACAGGGTCAACCTACAAACCTAAGCTTAGAACAGAATATGCCACAACCTGGGAACCCGGTTGCAGGGGATGCTGACGCTCCCCAACAATTTAGTCGAAGTACATCTGCTAATCGTGGAAGAAGACCATTTCGTCGAGGGGGTCGTCAGTTTGCAGGGGGAAGAGGAAGAGGTTCTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pyrid_oxidase_2

Protein Analysis

718

Amino Acids

77.03

Weight (kDa)

4.51

Isoelectric Point (pI)

56.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gar1 PF04410 294 - 375 5.9e-17 Gar1/Naf1 RNA binding region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1420
AasI GACNNNNNNGTC 1 cut(s) 2106
Acc36I ACCTGC 2 cut(s) 978, 1420
Acc65I GGTACC 1 cut(s) 911
AccB1I GGYRCC 2 cut(s) 728, 911
AccB7I CCANNNNNTGG 2 cut(s) 1730, 2024
AccI GTMKAC 1 cut(s) 24
AciI CCGC 4 cut(s) 233, 620, 626, 1638
AclWI GGATC 2 cut(s) 74, 1480
AcoI YGGCCR 1 cut(s) 171
AcsI RAATTY 5 cut(s) 343, 1014, 1211, 1641, 1774
AcuI CTGAAG 3 cut(s) 39, 351, 1386
AcyI GRCGYC 2 cut(s) 72, 729
AfaI GTAC 3 cut(s) 913, 1613, 2077
AfiI CCNNNNNNNGG 8 cut(s) 169, 180, 1490, 1657, 1730, 1760, 2024, 2039
AgsI TTSAA 9 cut(s) 42, 57, 662, 1774, 1825, 1861, 1906, 1931, 1951
AjnI CCWGG 8 cut(s) 223, 304, 1337, 1489, 1743, 1759, 1783, 2023
AjuI GAANNNNNNNTTGG 2 cut(s) 368, 400
AluBI AGCT 8 cut(s) 38, 52, 546, 788, 820, 1235, 1406, 2001
AluI AGCT 8 cut(s) 38, 52, 546, 788, 820, 1235, 1406, 2001
Alw21I GWGCWC 2 cut(s) 822, 1137
Alw26I GTCTC 6 cut(s) 131, 431, 765, 996, 1240, 1450
AlwI GGATC 2 cut(s) 74, 1480
Ama87I CYCGRG 1 cut(s) 821
AoxI GGCC 4 cut(s) 171, 265, 302, 1503
ApeKI GCWGC 3 cut(s) 521, 880, 1406
ApoI RAATTY 5 cut(s) 343, 1014, 1211, 1641, 1774
ArsI GACNNNNNNTTYG 2 cut(s) 86, 118
Asp700I GAANNNNTTC 1 cut(s) 2146
Asp718I GGTACC 1 cut(s) 911
AspLEI GCGC 1 cut(s) 731
AspS9I GGNCC 8 cut(s) 61, 302, 797, 1022, 1334, 1427, 1676, 1787
AsuC2I CCSGG 2 cut(s) 1635, 2033
AsuHPI GGTGA 9 cut(s) 4, 208, 253, 328, 334, 680, 719, 1060, 1350
AvaI CYCGRG 1 cut(s) 821
AvaII GGWCC 7 cut(s) 61, 797, 1022, 1334, 1427, 1676, 1787
BaeI ACNNNNGTAYC 2 cut(s) 903, 936
BanI GGYRCC 2 cut(s) 728, 911
BanII GRGCYC 1 cut(s) 822
BbsI GAAGAC 1 cut(s) 2104
Bbv12I GWGCWC 2 cut(s) 822, 1137
BbvI GCAGC 3 cut(s) 533, 867, 1393
BccI CCATC 7 cut(s) 98, 593, 1438, 1659, 1693, 1837, 1918
BceAI ACGGC 2 cut(s) 59, 1427
BciT130I CCWGG 8 cut(s) 225, 306, 1339, 1491, 1745, 1761, 1785, 2025
BcnI CCSGG 2 cut(s) 1635, 2033
BcoDI GTCTC 6 cut(s) 131, 431, 765, 996, 1240, 1450
BfaI CTAG 2 cut(s) 549, 2151
BfoI RGCGCY 1 cut(s) 732
BfuAI ACCTGC 2 cut(s) 978, 1420
BglII AGATCT 1 cut(s) 1147
BisI GCNGC 3 cut(s) 522, 881, 1407
BlsI GCNGC 3 cut(s) 523, 882, 1408
Bme18I GGWCC 7 cut(s) 61, 797, 1022, 1334, 1427, 1676, 1787
BmeT110I CYCGRG 1 cut(s) 821
BmgT120I GGNCC 8 cut(s) 61, 302, 797, 1022, 1334, 1427, 1676, 1787
BmiI GGNNCC 9 cut(s) 63, 730, 799, 864, 913, 1336, 1678, 1789, 2030
BmsI GCATC 4 cut(s) 533, 1159, 1181, 2035
BpiI GAAGAC 1 cut(s) 2104
BpmI CTGGAG 1 cut(s) 828
Bpu10I CCTNAGC 1 cut(s) 1997
BpuEI CTTGAG 1 cut(s) 32
BpuMI CCSGG 2 cut(s) 1635, 2033
BsaHI GRCGYC 2 cut(s) 72, 729
BsaI GGTCTC 2 cut(s) 431, 996
BsaJI CCNNGG 7 cut(s) 174, 732, 858, 1337, 1680, 1744, 2024
BsaXI ACNNNNNCTCC 2 cut(s) 230, 260
Bsc4I CCNNNNNNNGG 8 cut(s) 169, 180, 1490, 1657, 1730, 1760, 2024, 2039
Bse118I RCCGGY 2 cut(s) 1079, 1289
Bse1I ACTGG 4 cut(s) 836, 845, 1008, 1513
Bse3DI GCAATG 1 cut(s) 646
BseBI CCWGG 8 cut(s) 225, 306, 1339, 1491, 1745, 1761, 1785, 2025
BseDI CCNNGG 7 cut(s) 174, 732, 858, 1337, 1680, 1744, 2024
BseGI GGATG 6 cut(s) 592, 604, 1701, 1812, 1848, 2050
BseLI CCNNNNNNNGG 8 cut(s) 169, 180, 1490, 1657, 1730, 1760, 2024, 2039
BseMI GCAATG 1 cut(s) 646
BseMII CTCAG 2 cut(s) 240, 1461
BseNI ACTGG 4 cut(s) 836, 845, 1008, 1513
BseRI GAGGAG 7 cut(s) 364, 572, 575, 578, 605, 659, 737
BseXI GCAGC 3 cut(s) 533, 867, 1393
BseYI CCCAGC 2 cut(s) 179, 1362
BsgI GTGCAG 2 cut(s) 702, 1392
BshFI GGCC 4 cut(s) 173, 267, 304, 1505
BshNI GGYRCC 2 cut(s) 728, 911
BsiHKAI GWGCWC 2 cut(s) 822, 1137
BsiHKCI CYCGRG 1 cut(s) 821
BsiSI CCGG 4 cut(s) 1080, 1290, 1634, 2033
BslFI GGGAC 5 cut(s) 196, 783, 1014, 1320, 1761
BslI CCNNNNNNNGG 8 cut(s) 169, 180, 1490, 1657, 1730, 1760, 2024, 2039
BsmAI GTCTC 6 cut(s) 131, 431, 765, 996, 1240, 1450
BsmBI CGTCTC 2 cut(s) 765, 1450
BsmFI GGGAC 5 cut(s) 196, 783, 1014, 1320, 1761
BsmI GAATGC 2 cut(s) 1291, 1801
BsnI GGCC 4 cut(s) 173, 267, 304, 1505
Bso31I GGTCTC 2 cut(s) 431, 996
BsoBI CYCGRG 1 cut(s) 821
Bsp1286I GDGCHC 2 cut(s) 822, 1137
Bsp143I GATC 7 cut(s) 31, 79, 1126, 1147, 1329, 1378, 1472
Bsp19I CCATGG 1 cut(s) 1680
BspACI CCGC 4 cut(s) 233, 620, 626, 1638
BspANI GGCC 4 cut(s) 173, 267, 304, 1505
BspCNI CTCAG 2 cut(s) 241, 1460
BspLI GGNNCC 9 cut(s) 63, 730, 799, 864, 913, 1336, 1678, 1789, 2030
BspMI ACCTGC 2 cut(s) 978, 1420
BspPI GGATC 2 cut(s) 74, 1480
BspT107I GGYRCC 2 cut(s) 728, 911
BspTNI GGTCTC 2 cut(s) 431, 996
BsrDI GCAATG 1 cut(s) 646
BsrFI RCCGGY 2 cut(s) 1079, 1289
BsrI ACTGG 4 cut(s) 836, 845, 1008, 1513
BssAI RCCGGY 2 cut(s) 1079, 1289
BssECI CCNNGG 7 cut(s) 174, 732, 858, 1337, 1680, 1744, 2024
BssMI GATC 7 cut(s) 31, 79, 1126, 1147, 1329, 1378, 1472
BssNI GRCGYC 2 cut(s) 72, 729
BssT1I CCWWGG 2 cut(s) 858, 1680
Bst2UI CCWGG 8 cut(s) 225, 306, 1339, 1491, 1745, 1761, 1785, 2025
Bst4CI ACNGT 3 cut(s) 193, 218, 1611
Bst6I CTCTTC 6 cut(s) 360, 774, 1185, 1405, 2131, 2137
BstACI GRCGYC 2 cut(s) 72, 729
BstAPI GCANNNNNTGC 2 cut(s) 1178, 2045
BstC8I GCNNGC 2 cut(s) 1291, 1659
BstDEI CTNAG 4 cut(s) 249, 1447, 1997, 2002
BstDSI CCRYGG 1 cut(s) 1680
BstENI CCTNNNNNAGG 1 cut(s) 1758
BstF5I GGATG 6 cut(s) 592, 604, 1701, 1812, 1848, 2050
BstH2I RGCGCY 1 cut(s) 732
BstHHI GCGC 1 cut(s) 731
BstKTI GATC 7 cut(s) 34, 82, 1129, 1150, 1332, 1381, 1475
BstMAI GTCTC 6 cut(s) 131, 431, 765, 996, 1240, 1450
BstMBI GATC 7 cut(s) 31, 79, 1126, 1147, 1329, 1378, 1472
BstMWI GCNNNNNNNGC 5 cut(s) 737, 1178, 1412, 1502, 2045
BstNI CCWGG 8 cut(s) 225, 306, 1339, 1491, 1745, 1761, 1785, 2025
BstNSI RCATGY 1 cut(s) 1548
BstV1I GCAGC 3 cut(s) 533, 867, 1393
BstV2I GAAGAC 1 cut(s) 2104
BstX2I RGATCY 1 cut(s) 1147
BstYI RGATCY 1 cut(s) 1147
BsuRI GGCC 4 cut(s) 173, 267, 304, 1505
BtgI CCRYGG 1 cut(s) 1680
BtgZI GCGATG 1 cut(s) 1937
BtsCI GGATG 6 cut(s) 592, 604, 1701, 1812, 1848, 2050
BtsIMutI CAGTG 1 cut(s) 1506
BveI ACCTGC 2 cut(s) 978, 1420
Cac8I GCNNGC 2 cut(s) 1291, 1659
CfoI GCGC 1 cut(s) 731
Cfr10I RCCGGY 2 cut(s) 1079, 1289
Cfr13I GGNCC 8 cut(s) 61, 302, 797, 1022, 1334, 1427, 1676, 1787
CseI GACGC 2 cut(s) 80, 2060
CsiI ACCWGGT 1 cut(s) 1759
Csp6I GTAC 3 cut(s) 912, 1612, 2076
CviAII CATG 7 cut(s) 1130, 1388, 1545, 1681, 1792, 1898, 1943
CviQI GTAC 3 cut(s) 912, 1612, 2076
DdeI CTNAG 4 cut(s) 249, 1447, 1997, 2002
DinI GGCGCC 1 cut(s) 730
DpnI GATC 7 cut(s) 33, 81, 1128, 1149, 1331, 1380, 1474
DpnII GATC 7 cut(s) 31, 79, 1126, 1147, 1329, 1378, 1472
DrdI GACNNNNNNGTC 1 cut(s) 2106
DseDI GACNNNNNNGTC 1 cut(s) 2106
EaeI YGGCCR 1 cut(s) 171
Eam1104I CTCTTC 6 cut(s) 360, 774, 1185, 1405, 2131, 2137
EarI CTCTTC 6 cut(s) 360, 774, 1185, 1405, 2131, 2137
EciI GGCGGA 3 cut(s) 635, 641, 1653
Ecl136II GAGCTC 1 cut(s) 820
Eco130I CCWWGG 2 cut(s) 858, 1680
Eco24I GRGCYC 1 cut(s) 822
Eco31I GGTCTC 2 cut(s) 431, 996
Eco47I GGWCC 7 cut(s) 61, 797, 1022, 1334, 1427, 1676, 1787
Eco53kI GAGCTC 1 cut(s) 820
Eco57I CTGAAG 3 cut(s) 39, 351, 1386
Eco88I CYCGRG 1 cut(s) 821
EcoICRI GAGCTC 1 cut(s) 820
EcoNI CCTNNNNNAGG 1 cut(s) 1758
EcoO109I RGGNCCY 3 cut(s) 61, 797, 1787
EcoRI GAATTC 2 cut(s) 1641, 1774
EcoRII CCWGG 8 cut(s) 223, 304, 1337, 1489, 1743, 1759, 1783, 2023
EcoT14I CCWWGG 2 cut(s) 858, 1680
EcoT22I ATGCAT 4 cut(s) 1174, 1579, 1801, 1837
EcoT38I GRGCYC 1 cut(s) 822
EgeI GGCGCC 1 cut(s) 730
EheI GGCGCC 1 cut(s) 730
ErhI CCWWGG 2 cut(s) 858, 1680
Esp3I CGTCTC 2 cut(s) 765, 1450
FaeI CATG 7 cut(s) 1133, 1391, 1548, 1684, 1795, 1901, 1946
FaqI GGGAC 5 cut(s) 196, 783, 1014, 1320, 1761
FatI CATG 7 cut(s) 1129, 1387, 1544, 1680, 1791, 1897, 1942
FblI GTMKAC 1 cut(s) 24
Fnu4HI GCNGC 3 cut(s) 522, 881, 1407
FokI GGATG 6 cut(s) 599, 611, 1708, 1819, 1855, 2057
FriOI GRGCYC 1 cut(s) 822
Fsp4HI GCNGC 3 cut(s) 522, 881, 1407
FspBI CTAG 2 cut(s) 549, 2151
GlaI GCGC 1 cut(s) 730
GluI GCNGC 3 cut(s) 522, 881, 1407
GsaI CCCAGC 2 cut(s) 183, 1366
GsuI CTGGAG 1 cut(s) 828
HaeII RGCGCY 1 cut(s) 732
HaeIII GGCC 4 cut(s) 173, 267, 304, 1505
HapII CCGG 4 cut(s) 1080, 1290, 1634, 2033
HgaI GACGC 2 cut(s) 80, 2060
HhaI GCGC 1 cut(s) 731
Hin1I GRCGYC 2 cut(s) 72, 729
Hin1II CATG 7 cut(s) 1133, 1391, 1548, 1684, 1795, 1901, 1946
Hin6I GCGC 1 cut(s) 729
HinP1I GCGC 1 cut(s) 729
HincII GTYRAC 6 cut(s) 1706, 1814, 1850, 1886, 1895, 1985
HindII GTYRAC 6 cut(s) 1706, 1814, 1850, 1886, 1895, 1985
HindIII AAGCTT 3 cut(s) 36, 50, 1999
HinfI GANTC 5 cut(s) 110, 128, 497, 1810, 1857
HpaII CCGG 4 cut(s) 1080, 1290, 1634, 2033
HphI GGTGA 9 cut(s) 4, 208, 253, 328, 334, 680, 719, 1060, 1350
Hpy188III TCNNGA 4 cut(s) 1115, 1376, 1674, 1966
Hpy99I CGWCG 3 cut(s) 190, 1422, 2112
HpyCH4III ACNGT 3 cut(s) 193, 218, 1611
HpyF10VI GCNNNNNNNGC 5 cut(s) 737, 1178, 1412, 1502, 2045
HpyF3I CTNAG 4 cut(s) 249, 1447, 1997, 2002
Hsp92I GRCGYC 2 cut(s) 72, 729
Hsp92II CATG 7 cut(s) 1133, 1391, 1548, 1684, 1795, 1901, 1946
HspAI GCGC 1 cut(s) 729
KasI GGCGCC 1 cut(s) 728
KpnI GGTACC 1 cut(s) 915
KroI GCCGGC 1 cut(s) 1289
KroNI GCCGGC 1 cut(s) 1291
Kzo9I GATC 7 cut(s) 31, 79, 1126, 1147, 1329, 1378, 1472
LmnI GCTCC 1 cut(s) 2059
Lsp1109I GCAGC 3 cut(s) 533, 867, 1393
LweI GCATC 4 cut(s) 533, 1159, 1181, 2035
MabI ACCWGGT 1 cut(s) 1759
MaeI CTAG 2 cut(s) 549, 2151
MaeIII GTNAC 1 cut(s) 1511
MalI GATC 7 cut(s) 33, 81, 1128, 1149, 1331, 1380, 1474
MboI GATC 7 cut(s) 31, 79, 1126, 1147, 1329, 1378, 1472
MfeI CAATTG 2 cut(s) 210, 291
MflI RGATCY 1 cut(s) 1147
MhlI GDGCHC 2 cut(s) 822, 1137
Mly113I GGCGCC 1 cut(s) 729
MlyI GAGTC 3 cut(s) 122, 506, 1819
MmeI TCCRAC 5 cut(s) 99, 370, 480, 868, 1072
Mph1103I ATGCAT 4 cut(s) 1174, 1579, 1801, 1837
MroNI GCCGGC 1 cut(s) 1289
MroXI GAANNNNTTC 1 cut(s) 2146
MseI TTAA 2 cut(s) 276, 849
MspA1I CMGCKG 1 cut(s) 1406
MspI CCGG 4 cut(s) 1080, 1290, 1634, 2033
MunI CAATTG 2 cut(s) 210, 291
Mva1269I GAATGC 2 cut(s) 1291, 1801
MvaI CCWGG 8 cut(s) 225, 306, 1339, 1491, 1745, 1761, 1785, 2025
MwoI GCNNNNNNNGC 5 cut(s) 737, 1178, 1412, 1502, 2045
NaeI GCCGGC 1 cut(s) 1291
NarI GGCGCC 1 cut(s) 729
NciI CCSGG 2 cut(s) 1635, 2033
NcoI CCATGG 1 cut(s) 1680
NdeII GATC 7 cut(s) 31, 79, 1126, 1147, 1329, 1378, 1472
NgoMIV GCCGGC 1 cut(s) 1289
NlaIII CATG 7 cut(s) 1133, 1391, 1548, 1684, 1795, 1901, 1946
NlaIV GGNNCC 9 cut(s) 63, 730, 799, 864, 913, 1336, 1678, 1789, 2030
NmeAIII GCCGAG 2 cut(s) 199, 757
NsiI ATGCAT 4 cut(s) 1174, 1579, 1801, 1837
NspI RCATGY 1 cut(s) 1548
PaeR7I CTCGAG 1 cut(s) 821
PaqCI CACCTGC 1 cut(s) 1420
PcsI WCGNNNNNNNCGW 1 cut(s) 2116
PctI GAATGC 2 cut(s) 1291, 1801
PdiI GCCGGC 1 cut(s) 1291
PdmI GAANNNNTTC 1 cut(s) 2146
PfeI GAWTC 2 cut(s) 110, 1857
PflMI CCANNNNNTGG 2 cut(s) 1730, 2024
PfoI TCCNGGA 1 cut(s) 1783
PkrI GCNGC 3 cut(s) 523, 882, 1408
PleI GAGTC 3 cut(s) 122, 505, 1818
PluTI GGCGCC 1 cut(s) 732
PpsI GAGTC 3 cut(s) 122, 505, 1818
PpuMI RGGWCCY 3 cut(s) 61, 797, 1787
Psp124BI GAGCTC 1 cut(s) 822
Psp5II RGGWCCY 3 cut(s) 61, 797, 1787
Psp6I CCWGG 8 cut(s) 223, 304, 1337, 1489, 1743, 1759, 1783, 2023
PspFI CCCAGC 2 cut(s) 179, 1362
PspGI CCWGG 8 cut(s) 223, 304, 1337, 1489, 1743, 1759, 1783, 2023
PspN4I GGNNCC 9 cut(s) 63, 730, 799, 864, 913, 1336, 1678, 1789, 2030
PspPI GGNCC 8 cut(s) 61, 302, 797, 1022, 1334, 1427, 1676, 1787
PspPPI RGGWCCY 3 cut(s) 61, 797, 1787
PspXI VCTCGAGB 1 cut(s) 821
PsuI RGATCY 1 cut(s) 1147
PvuII CAGCTG 1 cut(s) 1406
RsaI GTAC 3 cut(s) 913, 1613, 2077
RsaNI GTAC 3 cut(s) 912, 1612, 2076
SacI GAGCTC 1 cut(s) 822
SaqAI TTAA 2 cut(s) 276, 849
SatI GCNGC 3 cut(s) 522, 881, 1407
Sau3AI GATC 7 cut(s) 31, 79, 1126, 1147, 1329, 1378, 1472
Sau96I GGNCC 8 cut(s) 61, 302, 797, 1022, 1334, 1427, 1676, 1787
SchI GAGTC 3 cut(s) 122, 506, 1819
SduI GDGCHC 2 cut(s) 822, 1137
SexAI ACCWGGT 1 cut(s) 1759
SfaNI GCATC 4 cut(s) 533, 1159, 1181, 2035
SfoI GGCGCC 1 cut(s) 730
Sfr274I CTCGAG 1 cut(s) 821
SinI GGWCC 7 cut(s) 61, 797, 1022, 1334, 1427, 1676, 1787
SlaI CTCGAG 1 cut(s) 821
SmlI CTYRAG 2 cut(s) 47, 821
SmoI CTYRAG 2 cut(s) 47, 821
SsiI CCGC 4 cut(s) 233, 620, 626, 1638
SspDI GGCGCC 1 cut(s) 728
SspMI CTAG 2 cut(s) 549, 2151
SstI GAGCTC 1 cut(s) 822
StyI CCWWGG 2 cut(s) 858, 1680
TaaI ACNGT 3 cut(s) 193, 218, 1611
TaqI TCGA 9 cut(s) 30, 93, 126, 536, 762, 822, 1480, 2071, 2110
TaqII GACCGA 1 cut(s) 1322
TatI WGTACW 1 cut(s) 2075
TfiI GAWTC 2 cut(s) 110, 1857
Tru1I TTAA 2 cut(s) 276, 849
Tru9I TTAA 2 cut(s) 276, 849
TscAI CASTG 1 cut(s) 1513
TseI GCWGC 3 cut(s) 521, 880, 1406
TspDTI ATGAA 9 cut(s) 414, 504, 1026, 1203, 1218, 1239, 1289, 1404, 1808
TspGWI ACGGA 2 cut(s) 400, 984
TspRI CASTG 1 cut(s) 1513
Van91I CCANNNNNTGG 2 cut(s) 1730, 2024
VpaK11BI GGWCC 7 cut(s) 61, 797, 1022, 1334, 1427, 1676, 1787
XagI CCTNNNNNAGG 1 cut(s) 1758
XapI RAATTY 5 cut(s) 343, 1014, 1211, 1641, 1774
XceI RCATGY 1 cut(s) 1548
XcmI CCANNNNNNNNNTGG 3 cut(s) 275, 1727, 1835
XhoI CTCGAG 1 cut(s) 821
XmiI GTMKAC 1 cut(s) 24
XmnI GAANNNNTTC 1 cut(s) 2146
XspI CTAG 2 cut(s) 549, 2151
Zsp2I ATGCAT 4 cut(s) 1174, 1579, 1801, 1837
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.