Rorug02G0568100

WEB family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0015330
Physical Location & Seq
Forward (+)
69323582 .. 69326211
2630 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0568100.1

Sequence Viewer

Length: 2574 bp
ATGAAACCCATTCTCGCTCTACTTTACCCTTCCAGCTTGTTTCTACTCTCGGTCACCCTACTGGTGGCTGGAGAGTCTACAACCATCTACACTCCGACTGATGATATCACACTTAACTGTGGCTCTTCCGGCCGCATGGTCAGTAACTTTGATTTTCGAACTTGGAGTGGAGATATCAACTCAGAGCTTTCCCCTATAGAAGTTGGTAGCACATCCCGAGTTTTGAAAGCACCACCGTCGTCCTCCACGGGCAGCCAAGTACCGTACACCACAGCACGACTTTCTCACTCGGAATTCACTTACCGATTTCCCGTCAGTCCGGGCCAAAAGTTCATCCGCTTGTACTTCTACCCAGGTTCATACAGCGCCAACTTCGACCGCTCCAAGTCTCTCTTCTCTGTCAAAACGGGTGGCTACACCCTTCTCAAAGACTTCAACGTTTCTGTCAGTGCAGATGCTGATTATCTTGAGACGATGCTCAAAGAATTCTGTATTAACATTGAGCCAGAGCAACAGATGCTGAACATCACATTCACTCCCAGCAAAGATGGATACGCTTTTATCAACGGGATTGAAATTATGTCCATGCCTGCCTATCTTTACCACACTGCAGCCCAAGACGATGGGCCAAGTATTATCGGCAACGAAAACCGGAACGTCCCAGTGAAAAACCACACCGCTATGGAGATGATCTATCGAATCAACGTCGGCGGAAGTCCAGTCTCACCGAATGAAGACACAGGCATGTACCGCACCTGGGATTCAACGGACGAGATCTACTTAAATAATCAGAGTAGAACTTTGAGCATGTTATCACAAAGCAATAATAATACTCATCTCAAATTTGCAAAAATAAAGAACTACACTGCGCCGGTAGACGTTTACCGAACCGGCCGGTCAATGGAGGTGAACAGAACCATCAGCAAGAGCTACAATCTCACCTGGGGGTTTCCTGTAGATCCACAATTTTATTACCTGGTGAGGCTCCATTTTTGTGAGATTATATTTAGATTGGAGGGAGATCGTGTGTTTCAGATTTTTATAGCCGACCAACCAGCGGAACAGAGAGCGGACATAATCCAATGGAGTGGAGGAAATGGGATTCCCGTATATAGAGACTACCTTGTGTTCGTCCCCAGTCTTCCAAACAAGAAGAAAGTTGACATCTCTGTTGCACTACAAGCAAATCAAGACGATTCGAAAACTCGATATAATGATGCAATCTTGAATGGGCTCGAAATCTTCAAACTGAATGACACAAGCGGAAATCTCGCCGGACCCAATCCCAACCAACCGCCGGAGGACGAACCAAAGATGAAGCCGGAAAGCCAAAGAAAACCGAAGAAGTCGATTCCTATGCTTGCTATCATTGCCGGCGTAGTTTCCGTCTTACTTGTTCCTTCCCTATTCGGCTTTTTAGTTTTCAGGCGTACAAGAAAACTCAAGGACTCCGGCTCCAGCCACAAGATGACGAAATCAATCACCAACATTGGGTCACATATCCCATCTTATTTGTGTCGGTACTTTTCACTGGCAGCGATCAAAGCTGCCACCAAAAACTTCGATGACACTTTTATCGTTGGGATTGGTGGGTTTGGCCACGTGTACAAAGGACACTTTGATGATGGGGCCACCCTTGTTGCAATCAAACGGCTAAAAGGCACTTCTTCGCAGGGAGCCCACGAGTTCATGACGGAAATCAAGGTGCTCTCTCAACTGCGCCACCGTCACTTGGTGTCTCTAATTGGATATTGTGCCGATCAAGGTGAGATGATTTTAGTGTACGATTACATGTCACGAGGGACCCTTAGTGATCATTTGCACCACATTGAGAAACCGCGTCTTCCTTGGGAACGACGACTTCGGATTTGTATTGGTGCAGCTCAAGGTTTGCACTACCTTCACACAGGTACCAAAGGCACCATCATTCACCGTGACGTAAAGAGCACAAACATATTATTAGACGAGAAATGGGTAGCCAAGGTTTCAGATTTTGGGTTGTCAAAAATGGGCAATATCACAATGTCTAAAACCCACATTAGCACAAAGGTGAAGGGTAGTTTCGGATATCTTGACCCTGATTATTACCGGCGTCAACAATTGACTGAGAAGTCTGACGTGTACTCATTTGGCGTAGTGTTATGCGAAGTATTGTGTGGGAGGCCAGCTGTGACCATCGTGGACAATATTCGAGTTGGCTTGGCTGGATGGGCCAAAAAGTGTCATCGCAATGGGCTATTTGATCAGATTGTTGACCCAAATTTGAAGGGTGAAATTGCAGTCCGATGCTTGCATAAATTTGCTTCCATTGCAATGAGTTGCTTGGATGATAATGGGACCAATCGGCCATCGATGGATGATGTTGTGAGAGGGCTTCAGTTTGCATTGCAAATGCAGCAAAACAACGAGGATTATATTGATCGCATTAATGAAAGGACGGATCAAGATGAGATTTCATTGATAAAGGACAATGAAGGGTCTTGTTCTAGTGAGCAAAGTAGTGGGGCGAATGAATCCGTCCAAGAGTTGACCAGGACAATTTTCTCCGAGATCATTGATCCGGTTGGAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

857

Amino Acids

95.98

Weight (kDa)

8.08

Isoelectric Point (pI)

42.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 38 - 416 9.5e-30 Malectin-like domain
Malectin PF11721 231 - 375 2e-10 Malectin domain
Pkinase PF00069 526 - 789 2.2e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 527 - 791 1.6e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015330)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58070
fragaria_vesca FvH4_6g51930
malus_domestica MD08G1240500.v1.1 MD15G1433700.v1.1
prunus_persica Prupe.1G577200_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0173411
rosa_laevigata RLG00000022187
rosa_multiflora Rmu_co8519037.1_g000002 Rmu_ssc0000282.1_g000013
rosa_roxburghii Rroxscaffold_2G00078890
rosa_rugosa Rorug02G0568100
rosa_samantha Rh2AG648600 Rh2BG659200 Rh2CG624500 Rh2DG674400
rosa_wichuraiana Rw2G053240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2110
Acc65I GGTACC 1 cut(s) 1910
AccB1I GGYRCC 2 cut(s) 1910, 1919
AccBSI CCGCTC 2 cut(s) 381, 1070
AccI GTMKAC 2 cut(s) 77, 876
AccII CGCG 1 cut(s) 1840
AclI AACGTT 1 cut(s) 438
AclWI GGATC 3 cut(s) 953, 2448, 2552
AcoI YGGCCR 4 cut(s) 130, 892, 1597, 2345
AcsI RAATTY 5 cut(s) 293, 485, 842, 2260, 2297
AcuI CTGAAG 1 cut(s) 2360
AcvI CACGTG 1 cut(s) 1603
AcyI GRCGYC 1 cut(s) 2092
AdeI CACNNNGTG 1 cut(s) 1735
AfiI CCNNNNNNNGG 7 cut(s) 64, 757, 901, 1057, 1297, 1491, 1732
AflIII ACRYGT 3 cut(s) 1602, 1791, 2118
AgsI TTSAA 7 cut(s) 226, 436, 575, 765, 1228, 1246, 2266
AjiI CACGTC 1 cut(s) 2119
AjnI CCWGG 5 cut(s) 352, 755, 941, 975, 2531
AjuI GAANNNNNNNTTGG 2 cut(s) 377, 409
AleI CACNNNNGTG 1 cut(s) 2048
AluBI AGCT 6 cut(s) 36, 187, 930, 1547, 1883, 2168
AluI AGCT 6 cut(s) 36, 187, 930, 1547, 1883, 2168
Alw21I GWGCWC 2 cut(s) 1710, 1949
Alw26I GTCTC 5 cut(s) 393, 464, 727, 1110, 1743
AlwI GGATC 3 cut(s) 953, 2448, 2552
AlwNI CAGNNNCTG 2 cut(s) 458, 520
Ama87I CYCGRG 1 cut(s) 216
AoxI GGCC 9 cut(s) 130, 322, 626, 892, 1597, 1629, 2162, 2211, 2345
ApeKI GCWGC 6 cut(s) 252, 611, 1535, 1547, 1880, 2395
ApoI RAATTY 5 cut(s) 293, 485, 842, 2260, 2297
ArsI GACNNNNNNTTYG 2 cut(s) 1851, 1883
AseI ATTAAT 1 cut(s) 2427
Asp718I GGTACC 1 cut(s) 1910
AspLEI GCGC 3 cut(s) 368, 871, 1722
AspS9I GGNCC 7 cut(s) 322, 626, 1277, 1629, 1803, 2211, 2337
AsuC2I CCSGG 1 cut(s) 321
AsuII TTCGAA 2 cut(s) 157, 1199
AvaI CYCGRG 1 cut(s) 216
AvaII GGWCC 3 cut(s) 1277, 1803, 2337
BaeI ACNNNNGTAYC 2 cut(s) 1894, 1927
BalI TGGCCA 1 cut(s) 1599
BanI GGYRCC 2 cut(s) 1910, 1919
BanII GRGCYC 2 cut(s) 1236, 1681
BauI CACGAG 2 cut(s) 1682, 1797
BbrPI CACGTG 1 cut(s) 1603
BbsI GAAGAC 3 cut(s) 741, 1133, 1835
Bbv12I GWGCWC 2 cut(s) 1710, 1949
BbvI GCAGC 6 cut(s) 264, 623, 1534, 1547, 1892, 2407
BceAI ACGGC 1 cut(s) 1667
BcgI CGANNNNNNTGC 4 cut(s) 219, 253, 1339, 1373
BciT130I CCWGG 5 cut(s) 354, 757, 943, 977, 2533
BciVI GTATCC 1 cut(s) 545
BclI TGATCA 2 cut(s) 1813, 2242
BcnI CCSGG 1 cut(s) 321
BcoDI GTCTC 5 cut(s) 393, 464, 727, 1110, 1743
BfaI CTAG 1 cut(s) 2487
BfmI CTRYAG 3 cut(s) 195, 609, 954
BfoI RGCGCY 1 cut(s) 369
BfuI GTATCC 1 cut(s) 545
BglII AGATCT 1 cut(s) 774
BisI GCNGC 7 cut(s) 133, 253, 612, 1536, 1548, 1881, 2396
BlsI GCNGC 7 cut(s) 134, 254, 613, 1537, 1549, 1882, 2397
Bme1390I CCNGG 6 cut(s) 321, 354, 757, 943, 977, 2533
Bme18I GGWCC 3 cut(s) 1277, 1803, 2337
BmeT110I CYCGRG 1 cut(s) 216
BmgBI CACGTC 1 cut(s) 2119
BmgT120I GGNCC 7 cut(s) 322, 626, 1277, 1629, 1803, 2211, 2337
BmrFI CCNGG 6 cut(s) 321, 354, 757, 943, 977, 2533
BmrI ACTGGG 2 cut(s) 656, 1131
BmsI GCATC 5 cut(s) 445, 465, 507, 1207, 2276
BmuI ACTGGG 2 cut(s) 656, 1131
BpiI GAAGAC 3 cut(s) 741, 1133, 1835
BpmI CTGGAG 2 cut(s) 90, 1441
Bpu14I TTCGAA 2 cut(s) 157, 1199
BpuEI CTTGAG 3 cut(s) 488, 1427, 1869
BpuMI CCSGG 1 cut(s) 321
Bsa29I ATCGAT 1 cut(s) 2351
BsaAI YACGTR 1 cut(s) 1603
BsaHI GRCGYC 1 cut(s) 2092
BsaJI CCNNGG 6 cut(s) 246, 352, 756, 942, 1847, 1980
BsaWI WCCGGW 2 cut(s) 651, 2560
BsaXI ACNNNNNCTCC 6 cut(s) 520, 550, 1011, 1041, 1439, 1469
Bsc4I CCNNNNNNNGG 7 cut(s) 64, 757, 901, 1057, 1297, 1491, 1732
Bse118I RCCGGY 5 cut(s) 871, 890, 894, 1373, 2088
Bse1I ACTGG 5 cut(s) 66, 662, 719, 1137, 1536
Bse3DI GCAATG 5 cut(s) 1368, 2236, 2307, 2319, 2384
BseBI CCWGG 5 cut(s) 354, 757, 943, 977, 2533
BseCI ATCGAT 1 cut(s) 2351
BseDI CCNNGG 6 cut(s) 246, 352, 756, 942, 1847, 1980
BseGI GGATG 5 cut(s) 212, 333, 2213, 2332, 2362
BseLI CCNNNNNNNGG 7 cut(s) 64, 757, 901, 1057, 1297, 1491, 1732
BseMI GCAATG 5 cut(s) 1368, 2236, 2307, 2319, 2384
BseMII CTCAG 2 cut(s) 195, 2097
BseNI ACTGG 5 cut(s) 66, 662, 719, 1137, 1536
BseX3I CGGCCG 2 cut(s) 130, 892
BseXI GCAGC 6 cut(s) 264, 623, 1534, 1547, 1892, 2407
BseYI CCCAGC 1 cut(s) 539
BsgI GTGCAG 2 cut(s) 471, 1899
Bsh1236I CGCG 1 cut(s) 1840
Bsh1285I CGRYCG 3 cut(s) 133, 379, 895
BshFI GGCC 9 cut(s) 132, 324, 628, 894, 1599, 1631, 2164, 2213, 2347
BshNI GGYRCC 2 cut(s) 1910, 1919
BshVI ATCGAT 1 cut(s) 2351
BsiEI CGRYCG 3 cut(s) 133, 379, 895
BsiHKAI GWGCWC 2 cut(s) 1710, 1949
BsiHKCI CYCGRG 1 cut(s) 216
BslFI GGGAC 4 cut(s) 644, 1118, 1816, 2350
BslI CCNNNNNNNGG 7 cut(s) 64, 757, 901, 1057, 1297, 1491, 1732
BsmAI GTCTC 5 cut(s) 393, 464, 727, 1110, 1743
BsmBI CGTCTC 1 cut(s) 464
BsmFI GGGAC 4 cut(s) 644, 1118, 1816, 2350
BsnI GGCC 9 cut(s) 132, 324, 628, 894, 1599, 1631, 2164, 2213, 2347
BsoBI CYCGRG 1 cut(s) 216
Bsp119I TTCGAA 2 cut(s) 157, 1199
Bsp1286I GDGCHC 4 cut(s) 1236, 1681, 1710, 1949
Bsp1407I TGTACA 1 cut(s) 1605
BspANI GGCC 9 cut(s) 132, 324, 628, 894, 1599, 1631, 2164, 2213, 2347
BspCNI CTCAG 2 cut(s) 194, 2098
BspDI ATCGAT 1 cut(s) 2351
BspFNI CGCG 1 cut(s) 1840
BspHI TCATGA 1 cut(s) 1689
BspMAI CTGCAG 1 cut(s) 613
BspPI GGATC 3 cut(s) 953, 2448, 2552
BspQI GCTCTTC 1 cut(s) 130
BspT104I TTCGAA 2 cut(s) 157, 1199
BspT107I GGYRCC 2 cut(s) 1910, 1919
BsrBI CCGCTC 2 cut(s) 381, 1070
BsrDI GCAATG 5 cut(s) 1368, 2236, 2307, 2319, 2384
BsrFI RCCGGY 5 cut(s) 871, 890, 894, 1373, 2088
BsrGI TGTACA 1 cut(s) 1605
BsrI ACTGG 5 cut(s) 66, 662, 719, 1137, 1536
BssAI RCCGGY 5 cut(s) 871, 890, 894, 1373, 2088
BssECI CCNNGG 6 cut(s) 246, 352, 756, 942, 1847, 1980
BssNI GRCGYC 1 cut(s) 2092
BssSI CACGAG 2 cut(s) 1682, 1797
BssT1I CCWWGG 2 cut(s) 1847, 1980
Bst2BI CACGAG 2 cut(s) 1682, 1797
Bst2UI CCWGG 5 cut(s) 354, 757, 943, 977, 2533
Bst4CI ACNGT 5 cut(s) 119, 237, 264, 1727, 1934
Bst6I CTCTTC 2 cut(s) 130, 398
BstACI GRCGYC 1 cut(s) 2092
BstAPI GCANNNNNTGC 1 cut(s) 517
BstAUI TGTACA 1 cut(s) 1605
BstBAI YACGTR 1 cut(s) 1603
BstBI TTCGAA 2 cut(s) 157, 1199
BstC8I GCNNGC 5 cut(s) 591, 1362, 1375, 2166, 2291
BstDEI CTNAG 3 cut(s) 181, 1808, 2106
BstDSI CCRYGG 1 cut(s) 246
BstEII GGTNACC 1 cut(s) 52
BstF5I GGATG 5 cut(s) 212, 333, 2213, 2332, 2362
BstFNI CGCG 1 cut(s) 1840
BstH2I RGCGCY 1 cut(s) 369
BstHHI GCGC 3 cut(s) 368, 871, 1722
BstMAI GTCTC 5 cut(s) 393, 464, 727, 1110, 1743
BstMCI CGRYCG 3 cut(s) 133, 379, 895
BstMWI GCNNNNNNNGC 9 cut(s) 129, 517, 750, 1181, 1370, 1544, 2210, 2309, 2395
BstNI CCWGG 5 cut(s) 354, 757, 943, 977, 2533
BstNSI RCATGY 3 cut(s) 748, 811, 1795
BstPI GGTNACC 1 cut(s) 52
BstSCI CCNGG 6 cut(s) 319, 352, 755, 941, 975, 2531
BstSFI CTRYAG 3 cut(s) 195, 609, 954
BstUI CGCG 1 cut(s) 1840
BstV1I GCAGC 6 cut(s) 264, 623, 1534, 1547, 1892, 2407
BstV2I GAAGAC 3 cut(s) 741, 1133, 1835
BstX2I RGATCY 2 cut(s) 774, 958
BstXI CCANNNNNNTGG 2 cut(s) 623, 1088
BstYI RGATCY 2 cut(s) 774, 958
BstZI CGGCCG 2 cut(s) 130, 892
Bsu15I ATCGAT 1 cut(s) 2351
BsuI GTATCC 1 cut(s) 545
BsuRI GGCC 9 cut(s) 132, 324, 628, 894, 1599, 1631, 2164, 2213, 2347
BsuTUI ATCGAT 1 cut(s) 2351
BtgI CCRYGG 1 cut(s) 246
BtgZI GCGATG 1 cut(s) 2210
BtrI CACGTC 1 cut(s) 2119
BtsCI GGATG 5 cut(s) 212, 333, 2213, 2332, 2362
BtsI GCAGTG 2 cut(s) 606, 864
BtsIMutI CAGTG 5 cut(s) 454, 606, 669, 864, 1529
Cac8I GCNNGC 5 cut(s) 591, 1362, 1375, 2166, 2291
CaiI CAGNNNCTG 2 cut(s) 458, 520
CciI TCATGA 1 cut(s) 1689
CfoI GCGC 3 cut(s) 368, 871, 1722
Cfr10I RCCGGY 5 cut(s) 871, 890, 894, 1373, 2088
Cfr13I GGNCC 7 cut(s) 322, 626, 1277, 1629, 1803, 2211, 2337
ClaI ATCGAT 1 cut(s) 2351
CseI GACGC 2 cut(s) 1829, 2081
CsiI ACCWGGT 1 cut(s) 975
CspCI CAANNNNNGTGG 4 cut(s) 391, 426, 1621, 1656
CviAII CATG 6 cut(s) 136, 586, 745, 808, 1690, 1792
DdeI CTNAG 3 cut(s) 181, 1808, 2106
DraIII CACNNNGTG 1 cut(s) 1735
DrdI GACNNNNNNGTC 1 cut(s) 2110
DseDI GACNNNNNNGTC 1 cut(s) 2110
EaeI YGGCCR 4 cut(s) 130, 892, 1597, 2345
EagI CGGCCG 2 cut(s) 130, 892
Eam1104I CTCTTC 2 cut(s) 130, 398
EarI CTCTTC 2 cut(s) 130, 398
EciI GGCGGA 1 cut(s) 726
EclXI CGGCCG 2 cut(s) 130, 892
Eco130I CCWWGG 2 cut(s) 1847, 1980
Eco24I GRGCYC 2 cut(s) 1236, 1681
Eco32I GATATC 3 cut(s) 106, 175, 2069
Eco47I GGWCC 3 cut(s) 1277, 1803, 2337
Eco52I CGGCCG 2 cut(s) 130, 892
Eco57I CTGAAG 1 cut(s) 2360
Eco72I CACGTG 1 cut(s) 1603
Eco88I CYCGRG 1 cut(s) 216
Eco91I GGTNACC 1 cut(s) 52
EcoO109I RGGNCCY 1 cut(s) 1803
EcoO65I GGTNACC 1 cut(s) 52
EcoRI GAATTC 2 cut(s) 293, 485
EcoRII CCWGG 5 cut(s) 352, 755, 941, 975, 2531
EcoRV GATATC 3 cut(s) 106, 175, 2069
EcoT14I CCWWGG 2 cut(s) 1847, 1980
EcoT38I GRGCYC 2 cut(s) 1236, 1681
ErhI CCWWGG 2 cut(s) 1847, 1980
Esp3I CGTCTC 1 cut(s) 464
FaeI CATG 6 cut(s) 139, 589, 748, 811, 1693, 1795
FalI AAGNNNNNCTT 2 cut(s) 377, 409
FaqI GGGAC 4 cut(s) 644, 1118, 1816, 2350
FatI CATG 6 cut(s) 135, 585, 744, 807, 1689, 1791
FbaI TGATCA 2 cut(s) 1813, 2242
FblI GTMKAC 2 cut(s) 77, 876
Fnu4HI GCNGC 7 cut(s) 133, 253, 612, 1536, 1548, 1881, 2396
FokI GGATG 5 cut(s) 199, 320, 2220, 2339, 2369
FriOI GRGCYC 2 cut(s) 1236, 1681
Fsp4HI GCNGC 7 cut(s) 133, 253, 612, 1536, 1548, 1881, 2396
FspBI CTAG 1 cut(s) 2487
GlaI GCGC 3 cut(s) 367, 870, 1721
GluI GCNGC 7 cut(s) 133, 253, 612, 1536, 1548, 1881, 2396
GsaI CCCAGC 1 cut(s) 543
GsuI CTGGAG 2 cut(s) 90, 1441
HaeII RGCGCY 1 cut(s) 369
HaeIII GGCC 9 cut(s) 132, 324, 628, 894, 1599, 1631, 2164, 2213, 2347
HgaI GACGC 2 cut(s) 1829, 2081
HhaI GCGC 3 cut(s) 368, 871, 1722
Hin1I GRCGYC 1 cut(s) 2092
Hin1II CATG 6 cut(s) 139, 589, 748, 811, 1693, 1795
Hin6I GCGC 3 cut(s) 366, 869, 1720
HinP1I GCGC 3 cut(s) 366, 869, 1720
HincII GTYRAC 4 cut(s) 1162, 2096, 2254, 2529
HindII GTYRAC 4 cut(s) 1162, 2096, 2254, 2529
HinfI GANTC 8 cut(s) 74, 699, 761, 1102, 1196, 1351, 1448, 2513
Hpy188III TCNNGA 8 cut(s) 216, 467, 1190, 1225, 1690, 1797, 2072, 2444
Hpy99I CGWCG 3 cut(s) 241, 710, 1860
HpyAV CCTTC 7 cut(s) 39, 431, 1410, 1910, 2047, 2260, 2468
HpyCH4III ACNGT 5 cut(s) 119, 237, 264, 1727, 1934
HpyCH4IV ACGT 7 cut(s) 438, 657, 705, 879, 1602, 1938, 2118
HpyF10VI GCNNNNNNNGC 9 cut(s) 129, 517, 750, 1181, 1370, 1544, 2210, 2309, 2395
HpyF3I CTNAG 3 cut(s) 181, 1808, 2106
HpySE526I ACGT 7 cut(s) 438, 657, 705, 879, 1602, 1938, 2118
Hsp92I GRCGYC 1 cut(s) 2092
Hsp92II CATG 6 cut(s) 139, 589, 748, 811, 1693, 1795
HspAI GCGC 3 cut(s) 366, 869, 1720
KflI GGGWCCC 1 cut(s) 1803
KpnI GGTACC 1 cut(s) 1914
KroI GCCGGC 1 cut(s) 1373
KroNI GCCGGC 1 cut(s) 1375
Ksp22I TGATCA 2 cut(s) 1813, 2242
LguI GCTCTTC 1 cut(s) 130
LmnI GCTCC 4 cut(s) 386, 990, 1460, 1676
Lsp1109I GCAGC 6 cut(s) 264, 623, 1534, 1547, 1892, 2407
LweI GCATC 5 cut(s) 445, 465, 507, 1207, 2276
MabI ACCWGGT 1 cut(s) 975
MaeI CTAG 1 cut(s) 2487
MaeII ACGT 7 cut(s) 438, 657, 705, 879, 1602, 1938, 2118
MaeIII GTNAC 7 cut(s) 52, 143, 1494, 1727, 1794, 1934, 2170
MbiI CCGCTC 2 cut(s) 381, 1070
MboII GAAGA 9 cut(s) 117, 385, 746, 1133, 1165, 1234, 1354, 1659, 1835
MfeI CAATTG 1 cut(s) 2099
MflI RGATCY 2 cut(s) 774, 958
MhlI GDGCHC 4 cut(s) 1236, 1681, 1710, 1949
MlsI TGGCCA 1 cut(s) 1599
MluNI TGGCCA 1 cut(s) 1599
MlyI GAGTC 2 cut(s) 83, 1442
MmeI TCCRAC 2 cut(s) 119, 2545
Mox20I TGGCCA 1 cut(s) 1599
MroNI GCCGGC 1 cut(s) 1373
MscI TGGCCA 1 cut(s) 1599
MseI TTAA 4 cut(s) 114, 495, 782, 2427
MslI CAYNNNNRTG 7 cut(s) 680, 743, 993, 1620, 2048, 2229, 2312
Msp20I TGGCCA 1 cut(s) 1599
MspA1I CMGCKG 2 cut(s) 1058, 2168
MspR9I CCNGG 6 cut(s) 321, 354, 757, 943, 977, 2533
MunI CAATTG 1 cut(s) 2099
MvaI CCWGG 5 cut(s) 354, 757, 943, 977, 2533
MvnI CGCG 1 cut(s) 1840
MwoI GCNNNNNNNGC 9 cut(s) 129, 517, 750, 1181, 1370, 1544, 2210, 2309, 2395
NaeI GCCGGC 1 cut(s) 1375
NciI CCSGG 1 cut(s) 321
NgoMIV GCCGGC 1 cut(s) 1373
NlaIII CATG 6 cut(s) 139, 589, 748, 811, 1693, 1795
NmuCI GTSAC 6 cut(s) 52, 1494, 1727, 1794, 1934, 2170
NspI RCATGY 3 cut(s) 748, 811, 1795
NspV TTCGAA 2 cut(s) 157, 1199
OliI CACNNNNGTG 1 cut(s) 2048
PagI TCATGA 1 cut(s) 1689
PciI ACATGT 1 cut(s) 1791
PciSI GCTCTTC 1 cut(s) 130
PdiI GCCGGC 1 cut(s) 1375
PfeI GAWTC 6 cut(s) 699, 761, 1102, 1196, 1351, 2513
PkrI GCNGC 7 cut(s) 134, 254, 613, 1537, 1549, 1882, 2397
PleI GAGTC 2 cut(s) 82, 1442
PmaCI CACGTG 1 cut(s) 1603
PmlI CACGTG 1 cut(s) 1603
PpsI GAGTC 2 cut(s) 82, 1442
Ppu21I YACGTR 1 cut(s) 1603
PpuMI RGGWCCY 1 cut(s) 1803
PscI ACATGT 1 cut(s) 1791
PshBI ATTAAT 1 cut(s) 2427
Psp1406I AACGTT 1 cut(s) 438
Psp5II RGGWCCY 1 cut(s) 1803
Psp6I CCWGG 5 cut(s) 352, 755, 941, 975, 2531
PspCI CACGTG 1 cut(s) 1603
PspEI GGTNACC 1 cut(s) 52
PspFI CCCAGC 1 cut(s) 539
PspGI CCWGG 5 cut(s) 352, 755, 941, 975, 2531
PspPI GGNCC 7 cut(s) 322, 626, 1277, 1629, 1803, 2211, 2337
PspPPI RGGWCCY 1 cut(s) 1803
PstI CTGCAG 1 cut(s) 613
PstNI CAGNNNCTG 2 cut(s) 458, 520
PsuI RGATCY 2 cut(s) 774, 958
PvuII CAGCTG 1 cut(s) 2168
RseI CAYNNNNRTG 7 cut(s) 680, 743, 993, 1620, 2048, 2229, 2312
SapI GCTCTTC 1 cut(s) 130
SaqAI TTAA 4 cut(s) 114, 495, 782, 2427
SatI GCNGC 7 cut(s) 133, 253, 612, 1536, 1548, 1881, 2396
Sau96I GGNCC 7 cut(s) 322, 626, 1277, 1629, 1803, 2211, 2337
SchI GAGTC 2 cut(s) 83, 1442
ScrFI CCNGG 6 cut(s) 321, 354, 757, 943, 977, 2533
SduI GDGCHC 4 cut(s) 1236, 1681, 1710, 1949
SexAI ACCWGGT 1 cut(s) 975
SfaNI GCATC 5 cut(s) 445, 465, 507, 1207, 2276
SfcI CTRYAG 3 cut(s) 195, 609, 954
SfuI TTCGAA 2 cut(s) 157, 1199
SinI GGWCC 3 cut(s) 1277, 1803, 2337
SmiMI CAYNNNNRTG 7 cut(s) 680, 743, 993, 1620, 2048, 2229, 2312
SmlI CTYRAG 3 cut(s) 467, 1442, 1884
SmoI CTYRAG 3 cut(s) 467, 1442, 1884
SspI AATATT 1 cut(s) 2188
SspMI CTAG 1 cut(s) 2487
StyD4I CCNGG 6 cut(s) 319, 352, 755, 941, 975, 2531
StyI CCWWGG 2 cut(s) 1847, 1980
TaaI ACNGT 5 cut(s) 119, 237, 264, 1727, 1934
TaiI ACGT 7 cut(s) 441, 660, 708, 882, 1605, 1941, 2121
TaqII GACCGA 1 cut(s) 40
TatI WGTACW 3 cut(s) 342, 1605, 2121
TauI GCSGC 1 cut(s) 135
TfiI GAWTC 6 cut(s) 699, 761, 1102, 1196, 1351, 2513
Tru1I TTAA 4 cut(s) 114, 495, 782, 2427
Tru9I TTAA 4 cut(s) 114, 495, 782, 2427
TscAI CASTG 5 cut(s) 454, 613, 669, 871, 1536
TseFI GTSAC 6 cut(s) 52, 1494, 1727, 1794, 1934, 2170
TseI GCWGC 6 cut(s) 252, 611, 1535, 1547, 1880, 2395
Tsp45I GTSAC 6 cut(s) 52, 1494, 1727, 1794, 1934, 2170
TspGWI ACGGA 5 cut(s) 782, 1375, 1709, 2453, 2506
TspRI CASTG 5 cut(s) 454, 613, 669, 871, 1536
VpaK11BI GGWCC 3 cut(s) 1277, 1803, 2337
VspI ATTAAT 1 cut(s) 2427
XapI RAATTY 5 cut(s) 293, 485, 842, 2260, 2297
XceI RCATGY 3 cut(s) 748, 811, 1795
XmiI GTMKAC 2 cut(s) 77, 876
XspI CTAG 1 cut(s) 2487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.