Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0004597

Physical Location & Seq

Genomic Coordinates Reverse (-)

70487409 .. 70491972

Gene Structure 4564 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0580700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2556 bp

ATGGGAACTGAAGTACAGTCAAAGACGTATCTACCAGGATATTATTCCATACCGACTCTAACTAACAATGCTGGCCATGGTGGATGGTCCCTACTGCACGAGAACAAAACCTTGAAGAATGGGCAACAATATGACATACTCTCAACGAGGCCAGTTGTTGATGGATTTCATGGATGCAGTAAGGAACAAGTGAGGCAAATGATATTGAAGCATGAATCCATTTTCAAACATCAGCTCAATGAACTTCATCGTCTTTACGAAAGACAAAAGGACTTGATGAATGAGATCAAAAGCAAAGAACTGCTCAAACATAAAAAAGAAGCAGCGACATCACAATTACCTCTTTTTTCATCTGGTTTGCCCTTGGTTAATCCCGATTACCATAGACCATCTATGTCTACTACTGGTATCAGCAGCCAATCATATTGTAATTCTATTGGAAACACCCAGCAAACTAGTGGTGGCCCCAGCCAAAGTGGAGTCAAGAAGCTTCAGAGAAGATTGTTCAACCTTGAACTTCCAGCTGATGAATACATCAGTGATGGAGAAGCACCAGAAGGTGTTTGCTTGGGACCAGCAACTGAAAATTATCCTCCTATCAGAAGAAATGAGGCTCAAGTGTCATTTAATCGCATTGGTGAAGCATCTGGCAATAACAATAGTGCTTTGAGCTCTGGCTTGTATCTAGAAAGAAGCTATGGTTTGACCACTCTGAATGAACCCATTCAGATTGATAAAATGTCTGCGTCAACAAATGTGTACAGAGGTGTCTGGCCTTTTGCAAAGAAGTTCCCGGAGAACCCACAACTGGGAAAGGATGGAGGAGTTAGTAATCTGCATGGGAAGAATCAAAGCAACCAAAAGGAGTGGTTAACAAATGCTCTAAAGGCTGATCAAACAAGAAATTCTTTTGGTGGAAGTTTTGGCCTTCGAGATTCTCAGAAGCCTTGCGAACCATCAGAAACTGAAGCTAGGAAAGCATGTGAGTCTGCCAAGAGGACAATTTTTGGTATCGAAATCTCTGAAAGAGATATAAATCCATCTGGTAAGGCTTCTCAGTCTGATGTGGCCGCCATTTCTGAGTCACCTCCTACTTGGGCAAGACCTCCAAGTAGCTTGAGCCACAACCGGACATCAGGTCAATCGAACAGTTTGTTTAACACCTCCACACACTCTAATGGGGCTTCAATGATGTTGCAGCAAAACCCTGAAGTTATCAGGGACAGATTGCTCGTAGATTGCAATTCCATACCATTAACTCCAGGTCTGGGATCTGAAGTGTCACACCACAATGGTGTTTGCTTTCGCACCAAGATTGAGAGCAATGAATTACACAGTTATCACCCTTCAATCAGACTTGGCTTCCCCTATGCAGACAGCAGCTATAGTTCTGCTTCTAAAGATTTTACACAACATGTTCCTCAGTGGCCGTATTCGAGTGTAGGTTGCAGGGCGAATGCAAAGCCTTCACCTAATGTGCATGATAATAAATTTCTTCACAGACTGAGGAACCAAGAAACGCCACAAGGAAGATTGCATTGGCTTGAGGCAGCTTCACTTTGTAATGGTCCACTTGCTTCAGCAGTTGACAATGACAATTCTGTTGGAGTTGGAGAGCAACTGAAAGCACAGAGTTTATTTTCGGAAAAGGGATTGGATAATGACAATGCTTATTCAGGGGACCAAATAGACTTGAACAGATGTTTAACTGAAGAAGAAACTCGAATAGCTGTGCAGGCACCAGTAATAGTTGCAACAGATGTCAATGTTGGAGAAGCTTCTGAGGAAAGAAAATGTACAGAACTTTTTGATTCATCTCATGATGGTTTATTCAGGGTTGCAGCTGAGGCTCTGGTTGCCATCTCATCATCACAAGCTCATGAGATGCAGGAAAATGCTGCACATGGTCTTGATCAAGAAATTTCTGCTTGTCGTGAAGATGATGCAACAGTAATTGACGACTCCCTTCTTTGGTTTGCAGAAATAGTTTCTTCAAACGAAGAAAATCTTGAACAGACGGATAATGTGGTAAAAGTTAAGGGAGCGATGGATTACTTTGAGTACATGACATTAAATATGGCGGAAACCAAGTTAGAGCAGTGCTGCAATGTGCCTTCAGACAACCCAAAAGAAGTGCCGCTGTCAAAACGGCCACAAAGGGGTCAGACGAGGAGAGGGAGGCAACGAAAGGACTTCCAGAGGGATGTTCTCCCTGGTATTGCTTGTTTGTCAAGAAATGAGGTGACTGAGGATCTTCAAACATTTGAAGGGTCGATTAGAGCAAGCGGCAGCAGCTGGCAGTCAGGTTTATCACAGAGAAATGCTGGTAAGGTTGGCGGGGGAAGAGGGAGGAAGCGTTTGGGAACTTGCGCACTACCTACTTCTAGTGCTGTGCAGGCTGCAGTTAGTCAGCCCCAGATGGAGCAGCAGCCTCAATGTGGGGAGCTGCAGGAACCTGAGGAAAGAAGTATGGCGGTGACAGGTTGGGGTAAGAGGACAAGGCGTCCACCGCGGCAAAGATATCTGATTAATAGTTCTCCTGTTTCTCAAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Pkinase_Tyr

Protein Analysis

851

Amino Acids

93.83

Weight (kDa)

6.37

Isoelectric Point (pI)

51.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF863	PF05904	127 - 476	1.3e-10	Plant protein of unknown function (DUF863)
DUF863	PF05904	537 - 840	2.5e-67	Plant protein of unknown function (DUF863)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004597)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14210 AT5G14210 AT5G14210
fragaria_vesca	FvH4_6g52940 FvH4_6g53110 FvH4_6g53110 FvH4_6g53110 FvH4_6g53110 FvH4_6g53110 FvH4_6g53110 FvH4_6g53110
malus_domestica	MD09G1014600.v1.1 MD17G1014600.v1.1
prunus_persica	Prupe.3G303100_v2.0.a1 Prupe.3G303100_v2.0.a1
pyrus_communis	pycom111g01190
rosa_chinensis	RchiOBHm_Chr2g0174981
rosa_laevigata	RLG00000022304
rosa_multiflora	Rmu_co8187456.1_g000001 Rmu_sc0001277.1_g000005
rosa_roxburghii	Rroxscaffold_2G00077610
rosa_rugosa	Rorug02G0580500 Rorug02G0580600 Rorug02G0580700 Rorug02G0580700 Rorug02G0580800
rosa_samantha	Rh2AG661600 Rh2BG672900 Rh2CG636000 Rh2DG686500
rosa_wichuraiana	Rw2G054230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2371
AccB1I	GGYRCC	1 cut(s)	1738
AccI	GTMKAC	1 cut(s)	398
AccII	CGCG	1 cut(s)	2512
AciI	CCGC	8 cut(s)	1071, 2081, 2138, 2286, 2337, 2474, 2510, 2512
AclWI	GGATC	2 cut(s)	1279, 2259
AcoI	YGGCCR	4 cut(s)	73, 1068, 1427, 2150
AcsI	RAATTY	3 cut(s)	904, 1490, 1920
AcuI	CTGAAG	8 cut(s)	30, 476, 987, 1230, 1296, 1563, 1731, 2100
AcyI	GRCGYC	1 cut(s)	2503
AfaI	GTAC	4 cut(s)	15, 761, 1798, 2063
AfiI	CCNNNNNNNGG	6 cut(s)	808, 809, 1268, 1971, 2159, 2438
AflIII	ACRYGT	1 cut(s)	1414
AhdI	GACNNNNNGTC	2 cut(s)	1137, 2502
AhlI	ACTAGT	1 cut(s)	455
AjnI	CCWGG	3 cut(s)	34, 1261, 2212
AjuI	GAANNNNNNNTTGG	2 cut(s)	1522, 1554
AleI	CACNNNNGTG	1 cut(s)	1293
Alw21I	GWGCWC	1 cut(s)	674
AlwI	GGATC	2 cut(s)	1279, 2259
AlwNI	CAGNNNCTG	3 cut(s)	581, 965, 2295
AoxI	GGCC	8 cut(s)	73, 149, 463, 773, 925, 1068, 1427, 2150
ApoI	RAATTY	3 cut(s)	904, 1490, 1920
AseI	ATTAAT	1 cut(s)	2529
Asp700I	GAANNNNTTC	1 cut(s)	723
AspLEI	GCGC	1 cut(s)	2372
AspS9I	GGNCC	5 cut(s)	87, 464, 572, 1568, 1681
AsuC2I	CCSGG	1 cut(s)	794
AsuHPI	GGTGA	6 cut(s)	650, 1077, 1334, 1461, 2254, 2488
AvaII	GGWCC	4 cut(s)	87, 572, 1568, 1681
AxyI	CCTNAGG	1 cut(s)	2457
BalI	TGGCCA	1 cut(s)	75
BanI	GGYRCC	1 cut(s)	1738
BanII	GRGCYC	1 cut(s)	674
BauI	CACGAG	1 cut(s)	98
Bbv12I	GWGCWC	1 cut(s)	674
BbvCI	CCTCAGC	1 cut(s)	1845
BceAI	ACGGC	2 cut(s)	1414, 2165
BciT130I	CCWGG	3 cut(s)	36, 1263, 2214
BclI	TGATCA	2 cut(s)	892, 1912
BcnI	CCSGG	1 cut(s)	794
BcuI	ACTAGT	1 cut(s)	455
BfaI	CTAG	4 cut(s)	456, 686, 972, 2385
BfmI	CTRYAG	3 cut(s)	1384, 2400, 2447
Bme1390I	CCNGG	4 cut(s)	36, 794, 1263, 2214
Bme18I	GGWCC	4 cut(s)	87, 572, 1568, 1681
BmeRI	GACNNNNNGTC	2 cut(s)	1137, 2502
BmgT120I	GGNCC	5 cut(s)	87, 464, 572, 1568, 1681
BmiI	GGNNCC	7 cut(s)	89, 466, 573, 1511, 1682, 1740, 2454
BmrFI	CCNGG	4 cut(s)	36, 794, 1263, 2214
BmrI	ACTGGG	1 cut(s)	818
BmsI	GCATC	4 cut(s)	164, 653, 1875, 1933
BmuI	ACTGGG	1 cut(s)	818
BpmI	CTGGAG	1 cut(s)	1245
Bpu10I	CCTNAGC	1 cut(s)	1845
BpuEI	CTTGAG	3 cut(s)	600, 1138, 1565
BpuMI	CCSGG	1 cut(s)	794
BsaBI	GATNNNNATC	1 cut(s)	1035
BsaHI	GRCGYC	1 cut(s)	2503
BsaJI	CCNNGG	4 cut(s)	76, 363, 2212, 2510
BsaWI	WCCGGW	1 cut(s)	1128
BsaXI	ACNNNNNCTCC	2 cut(s)	2341, 2371
Bsc4I	CCNNNNNNNGG	6 cut(s)	808, 809, 1268, 1971, 2159, 2438
Bse1I	ACTGG	4 cut(s)	152, 409, 813, 1742
Bse21I	CCTNAGG	1 cut(s)	2457
Bse3DI	GCAATG	2 cut(s)	1330, 2113
Bse8I	GATNNNNATC	1 cut(s)	1035
BseBI	CCWGG	3 cut(s)	36, 1263, 2214
BseDI	CCNNGG	4 cut(s)	76, 363, 2212, 2510
BseGI	GGATG	4 cut(s)	89, 179, 823, 2209
BseJI	GATNNNNATC	1 cut(s)	1035
BseLI	CCNNNNNNNGG	6 cut(s)	808, 809, 1268, 1971, 2159, 2438
BseMI	GCAATG	2 cut(s)	1330, 2113
BseMII	CTCAG	9 cut(s)	953, 1070, 1071, 1436, 1496, 1773, 1836, 2238, 2448
BseNI	ACTGG	4 cut(s)	152, 409, 813, 1742
BseRI	GAGGAG	2 cut(s)	837, 2185
BseYI	CCCAGC	2 cut(s)	447, 467
BsgI	GTGCAG	4 cut(s)	80, 1754, 1884, 2414
Bsh1236I	CGCG	1 cut(s)	2512
BshFI	GGCC	8 cut(s)	75, 151, 465, 775, 927, 1070, 1429, 2152
BshNI	GGYRCC	1 cut(s)	1738
BsiHKAI	GWGCWC	1 cut(s)	674
BsiSI	CCGG	2 cut(s)	794, 1129
BslFI	GGGAC	4 cut(s)	73, 585, 1235, 1694
BslI	CCNNNNNNNGG	6 cut(s)	808, 809, 1268, 1971, 2159, 2438
BsmFI	GGGAC	4 cut(s)	73, 585, 1235, 1694
BsmI	GAATGC	1 cut(s)	1462
BsnI	GGCC	8 cut(s)	75, 151, 465, 775, 927, 1070, 1429, 2152
Bsp1286I	GDGCHC	1 cut(s)	674
Bsp1407I	TGTACA	2 cut(s)	759, 1796
Bsp143I	GATC	5 cut(s)	285, 892, 1271, 1912, 2251
Bsp19I	CCATGG	1 cut(s)	76
BspACI	CCGC	8 cut(s)	1071, 2081, 2138, 2286, 2337, 2474, 2510, 2512
BspANI	GGCC	8 cut(s)	75, 151, 465, 775, 927, 1070, 1429, 2152
BspCNI	CTCAG	9 cut(s)	952, 1069, 1072, 1435, 1497, 1774, 1837, 2239, 2449
BspFNI	CGCG	1 cut(s)	2512
BspHI	TCATGA	2 cut(s)	1819, 1879
BspLI	GGNNCC	7 cut(s)	89, 466, 573, 1511, 1682, 1740, 2454
BspMAI	CTGCAG	2 cut(s)	2404, 2451
BspPI	GGATC	2 cut(s)	1279, 2259
BspT107I	GGYRCC	1 cut(s)	1738
BsrDI	GCAATG	2 cut(s)	1330, 2113
BsrGI	TGTACA	2 cut(s)	759, 1796
BsrI	ACTGG	4 cut(s)	152, 409, 813, 1742
BssECI	CCNNGG	4 cut(s)	76, 363, 2212, 2510
BssMI	GATC	5 cut(s)	285, 892, 1271, 1912, 2251
BssNI	GRCGYC	1 cut(s)	2503
BssSI	CACGAG	1 cut(s)	98
BssT1I	CCWWGG	2 cut(s)	76, 363
Bst2BI	CACGAG	1 cut(s)	98
Bst2UI	CCWGG	3 cut(s)	36, 1263, 2214
Bst4CI	ACNGT	4 cut(s)	18, 1151, 1337, 1951
Bst6I	CTCTTC	1 cut(s)	2338
BstACI	GRCGYC	1 cut(s)	2503
BstAUI	TGTACA	2 cut(s)	759, 1796
BstC8I	GCNNGC	5 cut(s)	73, 1737, 2284, 2297, 2397
BstDEI	CTNAG	9 cut(s)	939, 1056, 1080, 1422, 1505, 1782, 1845, 2247, 2457
BstDSI	CCRYGG	2 cut(s)	76, 2510
BstF5I	GGATG	4 cut(s)	89, 179, 823, 2209
BstFNI	CGCG	1 cut(s)	2512
BstHHI	GCGC	1 cut(s)	2372
BstKTI	GATC	5 cut(s)	288, 895, 1274, 1915, 2254
BstMBI	GATC	5 cut(s)	285, 892, 1271, 1912, 2251
BstMWI	GCNNNNNNNGC	8 cut(s)	887, 977, 1736, 1847, 1856, 2292, 2396, 2509
BstNI	CCWGG	3 cut(s)	36, 1263, 2214
BstNSI	RCATGY	2 cut(s)	984, 1418
BstSCI	CCNGG	4 cut(s)	34, 792, 1261, 2212
BstSFI	CTRYAG	3 cut(s)	1384, 2400, 2447
BstUI	CGCG	1 cut(s)	2512
BstX2I	RGATCY	2 cut(s)	1271, 2251
BstYI	RGATCY	2 cut(s)	1271, 2251
Bsu36I	CCTNAGG	1 cut(s)	2457
BsuRI	GGCC	8 cut(s)	75, 151, 465, 775, 927, 1070, 1429, 2152
BtgI	CCRYGG	2 cut(s)	76, 2510
BtgZI	GCGATG	1 cut(s)	2060
BtsCI	GGATG	4 cut(s)	89, 179, 823, 2209
BtsI	GCAGTG	1 cut(s)	2105
BtsIMutI	CAGTG	3 cut(s)	544, 1430, 2105
Cac8I	GCNNGC	5 cut(s)	73, 1737, 2284, 2297, 2397
CaiI	CAGNNNCTG	3 cut(s)	581, 965, 2295
CciI	TCATGA	2 cut(s)	1819, 1879
CfoI	GCGC	1 cut(s)	2372
Cfr13I	GGNCC	5 cut(s)	87, 464, 572, 1568, 1681
Cfr42I	CCGCGG	1 cut(s)	2513
CseI	GACGC	2 cut(s)	735, 2492
Csp6I	GTAC	4 cut(s)	14, 760, 1797, 2062
CspCI	CAANNNNNGTGG	2 cut(s)	848, 883
CviQI	GTAC	4 cut(s)	14, 760, 1797, 2062
DdeI	CTNAG	9 cut(s)	939, 1056, 1080, 1422, 1505, 1782, 1845, 2247, 2457
DpnI	GATC	5 cut(s)	287, 894, 1273, 1914, 2253
DpnII	GATC	5 cut(s)	285, 892, 1271, 1912, 2251
DriI	GACNNNNNGTC	2 cut(s)	1137, 2502
EaeI	YGGCCR	4 cut(s)	73, 1068, 1427, 2150
Eam1104I	CTCTTC	1 cut(s)	2338
Eam1105I	GACNNNNNGTC	2 cut(s)	1137, 2502
EarI	CTCTTC	1 cut(s)	2338
EciI	GGCGGA	1 cut(s)	2096
Ecl136II	GAGCTC	1 cut(s)	672
Eco130I	CCWWGG	2 cut(s)	76, 363
Eco24I	GRGCYC	1 cut(s)	674
Eco32I	GATATC	1 cut(s)	2522
Eco47I	GGWCC	4 cut(s)	87, 572, 1568, 1681
Eco53kI	GAGCTC	1 cut(s)	672
Eco57I	CTGAAG	8 cut(s)	30, 476, 987, 1230, 1296, 1563, 1731, 2100
Eco81I	CCTNAGG	1 cut(s)	2457
EcoICRI	GAGCTC	1 cut(s)	672
EcoRII	CCWGG	3 cut(s)	34, 1261, 2212
EcoRV	GATATC	1 cut(s)	2522
EcoT14I	CCWWGG	2 cut(s)	76, 363
EcoT38I	GRGCYC	1 cut(s)	674
ErhI	CCWWGG	2 cut(s)	76, 363
FalI	AAGNNNNNCTT	4 cut(s)	892, 924, 1992, 2024
FaqI	GGGAC	4 cut(s)	73, 585, 1235, 1694
FauI	CCCGC	1 cut(s)	2330
FbaI	TGATCA	2 cut(s)	892, 1912
FblI	GTMKAC	1 cut(s)	398
FokI	GGATG	4 cut(s)	96, 186, 830, 2216
FriOI	GRGCYC	1 cut(s)	674
FspBI	CTAG	4 cut(s)	456, 686, 972, 2385
FspI	TGCGCA	1 cut(s)	2371
GlaI	GCGC	1 cut(s)	2371
GsaI	CCCAGC	2 cut(s)	451, 471
GsuI	CTGGAG	1 cut(s)	1245
HaeIII	GGCC	8 cut(s)	75, 151, 465, 775, 927, 1070, 1429, 2152
HapII	CCGG	2 cut(s)	794, 1129
HgaI	GACGC	2 cut(s)	735, 2492
HhaI	GCGC	1 cut(s)	2372
Hin1I	GRCGYC	1 cut(s)	2503
Hin6I	GCGC	1 cut(s)	2370
HinP1I	GCGC	1 cut(s)	2370
HincII	GTYRAC	3 cut(s)	750, 873, 1588
HindII	GTYRAC	3 cut(s)	750, 873, 1588
HindIII	AAGCTT	2 cut(s)	488, 1776
HinfI	GANTC	9 cut(s)	55, 215, 480, 847, 935, 986, 1082, 1811, 1961
HpaI	GTTAAC	1 cut(s)	873
HpaII	CCGG	2 cut(s)	794, 1129
HphI	GGTGA	6 cut(s)	650, 1077, 1334, 1461, 2254, 2488
Hpy166II	GTNNAC	7 cut(s)	399, 750, 760, 873, 1571, 1588, 2507
Hpy8I	GTNNAC	7 cut(s)	399, 750, 760, 873, 1571, 1588, 2507
HpyAV	CCTTC	7 cut(s)	551, 938, 1356, 1476, 1976, 2124, 2261
HpyCH4III	ACNGT	4 cut(s)	18, 1151, 1337, 1951
HpyCH4IV	ACGT	1 cut(s)	26
HpyF10VI	GCNNNNNNNGC	8 cut(s)	887, 977, 1736, 1847, 1856, 2292, 2396, 2509
HpyF3I	CTNAG	9 cut(s)	939, 1056, 1080, 1422, 1505, 1782, 1845, 2247, 2457
HpySE526I	ACGT	1 cut(s)	26
Hsp92I	GRCGYC	1 cut(s)	2503
HspAI	GCGC	1 cut(s)	2370
Ksp22I	TGATCA	2 cut(s)	892, 1912
KspAI	GTTAAC	1 cut(s)	873
KspI	CCGCGG	1 cut(s)	2513
Kzo9I	GATC	5 cut(s)	285, 892, 1271, 1912, 2251
LmnI	GCTCC	3 cut(s)	2042, 2422, 2443
LweI	GCATC	4 cut(s)	164, 653, 1875, 1933
MaeI	CTAG	4 cut(s)	456, 686, 972, 2385
MaeII	ACGT	1 cut(s)	26
MaeIII	GTNAC	4 cut(s)	1083, 1281, 2242, 2476
MalI	GATC	5 cut(s)	287, 894, 1273, 1914, 2253
MboI	GATC	5 cut(s)	285, 892, 1271, 1912, 2251
MflI	RGATCY	2 cut(s)	1271, 2251
MhlI	GDGCHC	1 cut(s)	674
MlsI	TGGCCA	1 cut(s)	75
MluNI	TGGCCA	1 cut(s)	75
MlyI	GAGTC	5 cut(s)	49, 489, 995, 1091, 1955
MmeI	TCCRAC	3 cut(s)	1585, 1591, 1750
Mox20I	TGGCCA	1 cut(s)	75
MroXI	GAANNNNTTC	1 cut(s)	723
MscI	TGGCCA	1 cut(s)	75
MseI	TTAA	9 cut(s)	369, 627, 872, 1158, 1256, 1706, 2037, 2072, 2529
MslI	CAYNNNNRTG	3 cut(s)	1176, 1290, 1293
Msp20I	TGGCCA	1 cut(s)	75
MspA1I	CMGCKG	5 cut(s)	524, 1844, 2140, 2295, 2512
MspI	CCGG	2 cut(s)	794, 1129
MspR9I	CCNGG	4 cut(s)	36, 794, 1263, 2214
Mva1269I	GAATGC	1 cut(s)	1462
MvaI	CCWGG	3 cut(s)	36, 1263, 2214
MvnI	CGCG	1 cut(s)	2512
MwoI	GCNNNNNNNGC	8 cut(s)	887, 977, 1736, 1847, 1856, 2292, 2396, 2509
NciI	CCSGG	1 cut(s)	794
NcoI	CCATGG	1 cut(s)	76
NdeII	GATC	5 cut(s)	285, 892, 1271, 1912, 2251
NlaIV	GGNNCC	7 cut(s)	89, 466, 573, 1511, 1682, 1740, 2454
NmuCI	GTSAC	4 cut(s)	1083, 1281, 2242, 2476
NsbI	TGCGCA	1 cut(s)	2371
NspI	RCATGY	2 cut(s)	984, 1418
OliI	CACNNNNGTG	1 cut(s)	1293
PagI	TCATGA	2 cut(s)	1819, 1879
PciI	ACATGT	1 cut(s)	1414
PctI	GAATGC	1 cut(s)	1462
PdmI	GAANNNNTTC	1 cut(s)	723
PfeI	GAWTC	4 cut(s)	215, 847, 935, 1811
PfoI	TCCNGGA	1 cut(s)	792
PleI	GAGTC	5 cut(s)	49, 488, 994, 1090, 1955
PpsI	GAGTC	5 cut(s)	49, 488, 994, 1090, 1955
PscI	ACATGT	1 cut(s)	1414
PshBI	ATTAAT	1 cut(s)	2529
Psp124BI	GAGCTC	1 cut(s)	674
Psp6I	CCWGG	3 cut(s)	34, 1261, 2212
PspFI	CCCAGC	2 cut(s)	447, 467
PspGI	CCWGG	3 cut(s)	34, 1261, 2212
PspN4I	GGNNCC	7 cut(s)	89, 466, 573, 1511, 1682, 1740, 2454
PspPI	GGNCC	5 cut(s)	87, 464, 572, 1568, 1681
PstI	CTGCAG	2 cut(s)	2404, 2451
PstNI	CAGNNNCTG	3 cut(s)	581, 965, 2295
PsuI	RGATCY	2 cut(s)	1271, 2251
PvuII	CAGCTG	3 cut(s)	524, 1844, 2295
RsaI	GTAC	4 cut(s)	15, 761, 1798, 2063
RsaNI	GTAC	4 cut(s)	14, 760, 1797, 2062
RseI	CAYNNNNRTG	3 cut(s)	1176, 1290, 1293
SacI	GAGCTC	1 cut(s)	674
SacII	CCGCGG	1 cut(s)	2513
SaqAI	TTAA	9 cut(s)	369, 627, 872, 1158, 1256, 1706, 2037, 2072, 2529
Sau3AI	GATC	5 cut(s)	285, 892, 1271, 1912, 2251
Sau96I	GGNCC	5 cut(s)	87, 464, 572, 1568, 1681
SchI	GAGTC	5 cut(s)	49, 489, 995, 1091, 1955
ScrFI	CCNGG	4 cut(s)	36, 794, 1263, 2214
SduI	GDGCHC	1 cut(s)	674
SfaNI	GCATC	4 cut(s)	164, 653, 1875, 1933
SfcI	CTRYAG	3 cut(s)	1384, 2400, 2447
Sfr303I	CCGCGG	1 cut(s)	2513
SgrBI	CCGCGG	1 cut(s)	2513
SinI	GGWCC	4 cut(s)	87, 572, 1568, 1681
SmiMI	CAYNNNNRTG	3 cut(s)	1176, 1290, 1293
SmlI	CTYRAG	3 cut(s)	615, 1117, 1544
SmoI	CTYRAG	3 cut(s)	615, 1117, 1544
SpeI	ACTAGT	1 cut(s)	455
SsiI	CCGC	8 cut(s)	1071, 2081, 2138, 2286, 2337, 2474, 2510, 2512
SspMI	CTAG	4 cut(s)	456, 686, 972, 2385
SstI	GAGCTC	1 cut(s)	674
StyD4I	CCNGG	4 cut(s)	34, 792, 1261, 2212
StyI	CCWWGG	2 cut(s)	76, 363
TaaI	ACNGT	4 cut(s)	18, 1151, 1337, 1951
TaiI	ACGT	1 cut(s)	29
TaqI	TCGA	6 cut(s)	931, 1014, 1145, 1436, 1723, 2273
TatI	WGTACW	4 cut(s)	13, 759, 1796, 2061
TauI	GCSGC	4 cut(s)	1073, 2140, 2289, 2515
TfiI	GAWTC	4 cut(s)	215, 847, 935, 1811
Tru1I	TTAA	9 cut(s)	369, 627, 872, 1158, 1256, 1706, 2037, 2072, 2529
Tru9I	TTAA	9 cut(s)	369, 627, 872, 1158, 1256, 1706, 2037, 2072, 2529
TscAI	CASTG	3 cut(s)	544, 1430, 2105
TseFI	GTSAC	4 cut(s)	1083, 1281, 2242, 2476
Tsp45I	GTSAC	4 cut(s)	1083, 1281, 2242, 2476
TspGWI	ACGGA	1 cut(s)	2033
TspRI	CASTG	3 cut(s)	544, 1430, 2105
VpaK11BI	GGWCC	4 cut(s)	87, 572, 1568, 1681
VspI	ATTAAT	1 cut(s)	2529
XapI	RAATTY	3 cut(s)	904, 1490, 1920
XbaI	TCTAGA	1 cut(s)	685
XceI	RCATGY	2 cut(s)	984, 1418
XcmI	CCANNNNNNNNNTGG	1 cut(s)	455
XmiI	GTMKAC	1 cut(s)	398
XmnI	GAANNNNTTC	1 cut(s)	723
XspI	CTAG	4 cut(s)	456, 686, 972, 2385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.