Domain of unknown function (DUF4339)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G01590 |
| fragaria_vesca | FvH4_6g10790 |
| malus_domestica | MD04G1164300.v1.1 MD12G1177900.v1.1 |
| prunus_persica | Prupe.6G283400_v2.0.a1 |
| pyrus_communis | pycom12g16830 |
| rosa_chinensis | RchiOBHm_Chr3g0461841 |
| rosa_laevigata | RLG00000024887 RLG00000024893 |
| rosa_multiflora | Rmu_sc0004308.1_g000016 Rmu_sc0004308.1_g000019 Rmu_sc0007777.1_g000004 Rmu_sc0007777.1_g000014 Rmu_sc0007777.1_g000021 |
| rosa_roxburghii | Rroxscaffold_6G00417870 |
| rosa_rugosa | Rorug03G0054100 Rorug03G0054300 |
| rosa_samantha | Rh3AG112200 Rh3CG117600 Rh3DG356900 |
| rosa_wichuraiana | Rw3G009510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 752, 1047 |
| AccB1I | GGYRCC | 1 cut(s) | 172 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 139 |
| AccI | GTMKAC | 2 cut(s) | 1024, 1134 |
| AciI | CCGC | 3 cut(s) | 488, 545, 997 |
| AclWI | GGATC | 4 cut(s) | 251, 394, 446, 752 |
| AcsI | RAATTY | 4 cut(s) | 135, 702, 864, 1445 |
| AcuI | CTGAAG | 4 cut(s) | 30, 554, 757, 1167 |
| AfaI | GTAC | 1 cut(s) | 549 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 139, 896 |
| AjnI | CCWGG | 1 cut(s) | 1018 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 693, 725 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 891, 923 |
| AluBI | AGCT | 7 cut(s) | 16, 43, 225, 288, 361, 952, 1151 |
| AluI | AGCT | 7 cut(s) | 16, 43, 225, 288, 361, 952, 1151 |
| Alw21I | GWGCWC | 2 cut(s) | 18, 45 |
| Alw26I | GTCTC | 2 cut(s) | 205, 1319 |
| AlwI | GGATC | 4 cut(s) | 251, 394, 446, 752 |
| ApeKI | GCWGC | 2 cut(s) | 970, 1177 |
| ApoI | RAATTY | 4 cut(s) | 135, 702, 864, 1445 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 495, 1521 |
| AsuHPI | GGTGA | 2 cut(s) | 292, 1370 |
| AsuII | TTCGAA | 2 cut(s) | 107, 623 |
| AxyI | CCTNAGG | 1 cut(s) | 1337 |
| BaeGI | GKGCMC | 1 cut(s) | 177 |
| BanI | GGYRCC | 1 cut(s) | 172 |
| BanII | GRGCYC | 2 cut(s) | 18, 45 |
| BauI | CACGAG | 1 cut(s) | 336 |
| BbsI | GAAGAC | 1 cut(s) | 801 |
| Bbv12I | GWGCWC | 2 cut(s) | 18, 45 |
| BbvI | GCAGC | 2 cut(s) | 957, 1164 |
| BccI | CCATC | 3 cut(s) | 899, 1254, 1357 |
| BciT130I | CCWGG | 1 cut(s) | 1020 |
| BcoDI | GTCTC | 2 cut(s) | 205, 1319 |
| BfaI | CTAG | 2 cut(s) | 573, 759 |
| BfmI | CTRYAG | 1 cut(s) | 971 |
| BglII | AGATCT | 1 cut(s) | 920 |
| BisI | GCNGC | 2 cut(s) | 971, 1178 |
| BlpI | GCTNAGC | 1 cut(s) | 357 |
| BlsI | GCNGC | 2 cut(s) | 972, 1179 |
| Bme1390I | CCNGG | 1 cut(s) | 1020 |
| BmiI | GGNNCC | 1 cut(s) | 174 |
| BmrFI | CCNGG | 1 cut(s) | 1020 |
| BmrI | ACTGGG | 1 cut(s) | 1287 |
| BmsI | GCATC | 2 cut(s) | 343, 582 |
| BmuI | ACTGGG | 1 cut(s) | 1287 |
| BpiI | GAAGAC | 1 cut(s) | 801 |
| BpmI | CTGGAG | 1 cut(s) | 1532 |
| Bpu10I | CCTNAGC | 1 cut(s) | 480 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 357 |
| Bpu14I | TTCGAA | 2 cut(s) | 107, 623 |
| BpuEI | CTTGAG | 2 cut(s) | 819, 1496 |
| Bsa29I | ATCGAT | 1 cut(s) | 1452 |
| BsaBI | GATNNNNATC | 1 cut(s) | 404 |
| BsaJI | CCNNGG | 1 cut(s) | 1497 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 139, 896 |
| Bse1I | ACTGG | 1 cut(s) | 1282 |
| Bse21I | CCTNAGG | 1 cut(s) | 1337 |
| Bse3DI | GCAATG | 1 cut(s) | 34 |
| Bse8I | GATNNNNATC | 1 cut(s) | 404 |
| BseBI | CCWGG | 1 cut(s) | 1020 |
| BseCI | ATCGAT | 1 cut(s) | 1452 |
| BseDI | CCNNGG | 1 cut(s) | 1497 |
| BseGI | GGATG | 4 cut(s) | 355, 688, 1246, 1349 |
| BseJI | GATNNNNATC | 1 cut(s) | 404 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 139, 896 |
| BseMI | GCAATG | 1 cut(s) | 34 |
| BseMII | CTCAG | 2 cut(s) | 471, 635 |
| BseNI | ACTGG | 1 cut(s) | 1282 |
| BseRI | GAGGAG | 3 cut(s) | 35, 235, 1307 |
| BseSI | GKGCMC | 1 cut(s) | 177 |
| BseXI | GCAGC | 2 cut(s) | 957, 1164 |
| BseYI | CCCAGC | 1 cut(s) | 327 |
| BshNI | GGYRCC | 1 cut(s) | 172 |
| BshVI | ATCGAT | 1 cut(s) | 1452 |
| BsiHKAI | GWGCWC | 2 cut(s) | 18, 45 |
| BslFI | GGGAC | 2 cut(s) | 344, 1295 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 139, 896 |
| BsmAI | GTCTC | 2 cut(s) | 205, 1319 |
| BsmFI | GGGAC | 2 cut(s) | 344, 1295 |
| Bsp119I | TTCGAA | 2 cut(s) | 107, 623 |
| Bsp1286I | GDGCHC | 3 cut(s) | 18, 45, 177 |
| Bsp143I | GATC | 6 cut(s) | 256, 399, 438, 744, 805, 920 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 357 |
| BspACI | CCGC | 3 cut(s) | 488, 545, 997 |
| BspCNI | CTCAG | 2 cut(s) | 472, 636 |
| BspDI | ATCGAT | 1 cut(s) | 1452 |
| BspHI | TCATGA | 1 cut(s) | 1300 |
| BspLI | GGNNCC | 1 cut(s) | 174 |
| BspMAI | CTGCAG | 1 cut(s) | 975 |
| BspPI | GGATC | 4 cut(s) | 251, 394, 446, 752 |
| BspQI | GCTCTTC | 1 cut(s) | 6 |
| BspT104I | TTCGAA | 2 cut(s) | 107, 623 |
| BspT107I | GGYRCC | 1 cut(s) | 172 |
| BsrDI | GCAATG | 1 cut(s) | 34 |
| BsrI | ACTGG | 1 cut(s) | 1282 |
| BssECI | CCNNGG | 1 cut(s) | 1497 |
| BssMI | GATC | 6 cut(s) | 256, 399, 438, 744, 805, 920 |
| BssNAI | GTATAC | 1 cut(s) | 1135 |
| BssSI | CACGAG | 1 cut(s) | 336 |
| BssT1I | CCWWGG | 1 cut(s) | 1497 |
| Bst1107I | GTATAC | 1 cut(s) | 1135 |
| Bst2BI | CACGAG | 1 cut(s) | 336 |
| Bst2UI | CCWGG | 1 cut(s) | 1020 |
| Bst4CI | ACNGT | 3 cut(s) | 454, 818, 875 |
| Bst6I | CTCTTC | 2 cut(s) | 6, 270 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 967 |
| BstBI | TTCGAA | 2 cut(s) | 107, 623 |
| BstC8I | GCNNGC | 2 cut(s) | 290, 486 |
| BstDEI | CTNAG | 4 cut(s) | 357, 480, 644, 1337 |
| BstF5I | GGATG | 4 cut(s) | 355, 688, 1246, 1349 |
| BstKTI | GATC | 6 cut(s) | 259, 402, 441, 747, 808, 923 |
| BstMAI | GTCTC | 2 cut(s) | 205, 1319 |
| BstMBI | GATC | 6 cut(s) | 256, 399, 438, 744, 805, 920 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 715, 958, 967, 1088 |
| BstNI | CCWGG | 1 cut(s) | 1020 |
| BstNSI | RCATGY | 2 cut(s) | 961, 1390 |
| BstSCI | CCNGG | 1 cut(s) | 1018 |
| BstSFI | CTRYAG | 1 cut(s) | 971 |
| BstSLI | GKGCMC | 1 cut(s) | 177 |
| BstV1I | GCAGC | 2 cut(s) | 957, 1164 |
| BstV2I | GAAGAC | 1 cut(s) | 801 |
| BstX2I | RGATCY | 1 cut(s) | 920 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 430 |
| BstYI | RGATCY | 1 cut(s) | 920 |
| BstZ17I | GTATAC | 1 cut(s) | 1135 |
| Bsu15I | ATCGAT | 1 cut(s) | 1452 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1337 |
| BsuTUI | ATCGAT | 1 cut(s) | 1452 |
| BtsCI | GGATG | 4 cut(s) | 355, 688, 1246, 1349 |
| BtsI | GCAGTG | 1 cut(s) | 1098 |
| BtsIMutI | CAGTG | 3 cut(s) | 450, 901, 1098 |
| Cac8I | GCNNGC | 2 cut(s) | 290, 486 |
| CciI | TCATGA | 1 cut(s) | 1300 |
| ClaI | ATCGAT | 1 cut(s) | 1452 |
| CseI | GACGC | 2 cut(s) | 242, 1035 |
| Csp6I | GTAC | 1 cut(s) | 548 |
| CviAII | CATG | 8 cut(s) | 148, 539, 628, 958, 962, 1230, 1301, 1387 |
| CviQI | GTAC | 1 cut(s) | 548 |
| DdeI | CTNAG | 4 cut(s) | 357, 480, 644, 1337 |
| DpnI | GATC | 6 cut(s) | 258, 401, 440, 746, 807, 922 |
| DpnII | GATC | 6 cut(s) | 256, 399, 438, 744, 805, 920 |
| Eam1104I | CTCTTC | 2 cut(s) | 6, 270 |
| EarI | CTCTTC | 2 cut(s) | 6, 270 |
| EciI | GGCGGA | 1 cut(s) | 986 |
| Ecl136II | GAGCTC | 2 cut(s) | 16, 43 |
| Eco130I | CCWWGG | 1 cut(s) | 1497 |
| Eco24I | GRGCYC | 2 cut(s) | 18, 45 |
| Eco32I | GATATC | 1 cut(s) | 1054 |
| Eco53kI | GAGCTC | 2 cut(s) | 16, 43 |
| Eco57I | CTGAAG | 4 cut(s) | 30, 554, 757, 1167 |
| Eco81I | CCTNAGG | 1 cut(s) | 1337 |
| EcoICRI | GAGCTC | 2 cut(s) | 16, 43 |
| EcoRII | CCWGG | 1 cut(s) | 1018 |
| EcoRV | GATATC | 1 cut(s) | 1054 |
| EcoT14I | CCWWGG | 1 cut(s) | 1497 |
| EcoT22I | ATGCAT | 1 cut(s) | 963 |
| EcoT38I | GRGCYC | 2 cut(s) | 18, 45 |
| ErhI | CCWWGG | 1 cut(s) | 1497 |
| FaeI | CATG | 8 cut(s) | 151, 542, 631, 961, 965, 1233, 1304, 1390 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 101, 133, 209, 241 |
| FaqI | GGGAC | 2 cut(s) | 344, 1295 |
| FatI | CATG | 8 cut(s) | 147, 538, 627, 957, 961, 1229, 1300, 1386 |
| FauNDI | CATATG | 2 cut(s) | 552, 1103 |
| FblI | GTMKAC | 2 cut(s) | 1024, 1134 |
| Fnu4HI | GCNGC | 2 cut(s) | 971, 1178 |
| FokI | GGATG | 4 cut(s) | 362, 695, 1233, 1336 |
| FriOI | GRGCYC | 2 cut(s) | 18, 45 |
| Fsp4HI | GCNGC | 2 cut(s) | 971, 1178 |
| FspBI | CTAG | 2 cut(s) | 573, 759 |
| GluI | GCNGC | 2 cut(s) | 971, 1178 |
| GsaI | CCCAGC | 1 cut(s) | 331 |
| GsuI | CTGGAG | 1 cut(s) | 1532 |
| HgaI | GACGC | 2 cut(s) | 242, 1035 |
| Hin1II | CATG | 8 cut(s) | 151, 542, 631, 961, 965, 1233, 1304, 1390 |
| HincII | GTYRAC | 1 cut(s) | 1068 |
| HindII | GTYRAC | 1 cut(s) | 1068 |
| HindIII | AAGCTT | 2 cut(s) | 359, 1149 |
| HinfI | GANTC | 8 cut(s) | 5, 55, 332, 528, 576, 1004, 1208, 1369 |
| HpaI | GTTAAC | 1 cut(s) | 1068 |
| HphI | GGTGA | 2 cut(s) | 292, 1370 |
| Hpy166II | GTNNAC | 5 cut(s) | 1025, 1068, 1135, 1265, 1378 |
| Hpy188I | TCNGA | 9 cut(s) | 10, 91, 202, 210, 232, 268, 776, 1213, 1407 |
| Hpy8I | GTNNAC | 5 cut(s) | 1025, 1068, 1135, 1265, 1378 |
| Hpy99I | CGWCG | 1 cut(s) | 1369 |
| HpyAV | CCTTC | 4 cut(s) | 577, 781, 1412, 1523 |
| HpyCH4III | ACNGT | 3 cut(s) | 454, 818, 875 |
| HpyCH4V | TGCA | 5 cut(s) | 147, 556, 857, 961, 973 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 715, 958, 967, 1088 |
| HpyF3I | CTNAG | 4 cut(s) | 357, 480, 644, 1337 |
| Hsp92II | CATG | 8 cut(s) | 151, 542, 631, 961, 965, 1233, 1304, 1390 |
| KspAI | GTTAAC | 1 cut(s) | 1068 |
| Kzo9I | GATC | 6 cut(s) | 256, 399, 438, 744, 805, 920 |
| LguI | GCTCTTC | 1 cut(s) | 6 |
| LmnI | GCTCC | 4 cut(s) | 40, 48, 222, 1421 |
| Lsp1109I | GCAGC | 2 cut(s) | 957, 1164 |
| LweI | GCATC | 2 cut(s) | 343, 582 |
| MaeI | CTAG | 2 cut(s) | 573, 759 |
| MaeIII | GTNAC | 4 cut(s) | 928, 1190, 1397, 1460 |
| MalI | GATC | 6 cut(s) | 258, 401, 440, 746, 807, 922 |
| MboI | GATC | 6 cut(s) | 256, 399, 438, 744, 805, 920 |
| MboII | GAAGA | 7 cut(s) | 23, 96, 169, 287, 392, 503, 806 |
| MflI | RGATCY | 1 cut(s) | 920 |
| MhlI | GDGCHC | 3 cut(s) | 18, 45, 177 |
| MluCI | AATT | 9 cut(s) | 135, 696, 702, 864, 990, 1169, 1354, 1445, 1521 |
| MlyI | GAGTC | 3 cut(s) | 326, 1013, 1202 |
| Mph1103I | ATGCAT | 1 cut(s) | 963 |
| MroXI | GAANNNNTTC | 2 cut(s) | 495, 1521 |
| MseI | TTAA | 9 cut(s) | 119, 390, 1011, 1067, 1139, 1172, 1286, 1457, 1538 |
| MslI | CAYNNNNRTG | 2 cut(s) | 632, 1251 |
| MspR9I | CCNGG | 1 cut(s) | 1020 |
| MvaI | CCWGG | 1 cut(s) | 1020 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 715, 958, 967, 1088 |
| NdeI | CATATG | 2 cut(s) | 552, 1103 |
| NdeII | GATC | 6 cut(s) | 256, 399, 438, 744, 805, 920 |
| NlaIII | CATG | 8 cut(s) | 151, 542, 631, 961, 965, 1233, 1304, 1390 |
| NlaIV | GGNNCC | 1 cut(s) | 174 |
| NmuCI | GTSAC | 2 cut(s) | 1397, 1460 |
| NsiI | ATGCAT | 1 cut(s) | 963 |
| NspI | RCATGY | 2 cut(s) | 961, 1390 |
| NspV | TTCGAA | 2 cut(s) | 107, 623 |
| PagI | TCATGA | 1 cut(s) | 1300 |
| PciSI | GCTCTTC | 1 cut(s) | 6 |
| PdmI | GAANNNNTTC | 2 cut(s) | 495, 1521 |
| PfeI | GAWTC | 4 cut(s) | 55, 528, 576, 1369 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 139 |
| PkrI | GCNGC | 2 cut(s) | 972, 1179 |
| PleI | GAGTC | 3 cut(s) | 326, 1012, 1202 |
| PpsI | GAGTC | 3 cut(s) | 326, 1012, 1202 |
| PsiI | TTATAA | 2 cut(s) | 752, 1047 |
| Psp124BI | GAGCTC | 2 cut(s) | 18, 45 |
| Psp6I | CCWGG | 1 cut(s) | 1018 |
| PspFI | CCCAGC | 1 cut(s) | 327 |
| PspGI | CCWGG | 1 cut(s) | 1018 |
| PspN4I | GGNNCC | 1 cut(s) | 174 |
| PstI | CTGCAG | 1 cut(s) | 975 |
| PsuI | RGATCY | 1 cut(s) | 920 |
| RsaI | GTAC | 1 cut(s) | 549 |
| RsaNI | GTAC | 1 cut(s) | 548 |
| RseI | CAYNNNNRTG | 2 cut(s) | 632, 1251 |
| SacI | GAGCTC | 2 cut(s) | 18, 45 |
| SapI | GCTCTTC | 1 cut(s) | 6 |
| SaqAI | TTAA | 9 cut(s) | 119, 390, 1011, 1067, 1139, 1172, 1286, 1457, 1538 |
| SatI | GCNGC | 2 cut(s) | 971, 1178 |
| Sau3AI | GATC | 6 cut(s) | 256, 399, 438, 744, 805, 920 |
| SchI | GAGTC | 3 cut(s) | 326, 1013, 1202 |
| ScrFI | CCNGG | 1 cut(s) | 1020 |
| SduI | GDGCHC | 3 cut(s) | 18, 45, 177 |
| SfaNI | GCATC | 2 cut(s) | 343, 582 |
| SfcI | CTRYAG | 1 cut(s) | 971 |
| SfuI | TTCGAA | 2 cut(s) | 107, 623 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 632, 1251 |
| SmlI | CTYRAG | 2 cut(s) | 834, 1475 |
| SmoI | CTYRAG | 2 cut(s) | 834, 1475 |
| Sse9I | AATT | 9 cut(s) | 135, 696, 702, 864, 990, 1169, 1354, 1445, 1521 |
| SsiI | CCGC | 3 cut(s) | 488, 545, 997 |
| SspMI | CTAG | 2 cut(s) | 573, 759 |
| SstI | GAGCTC | 2 cut(s) | 18, 45 |
| StyD4I | CCNGG | 1 cut(s) | 1018 |
| StyI | CCWWGG | 1 cut(s) | 1497 |
| TaaI | ACNGT | 3 cut(s) | 454, 818, 875 |
| TaqI | TCGA | 6 cut(s) | 107, 441, 623, 954, 1056, 1452 |
| TasI | AATT | 9 cut(s) | 135, 696, 702, 864, 990, 1169, 1354, 1445, 1521 |
| TfiI | GAWTC | 4 cut(s) | 55, 528, 576, 1369 |
| Tru1I | TTAA | 9 cut(s) | 119, 390, 1011, 1067, 1139, 1172, 1286, 1457, 1538 |
| Tru9I | TTAA | 9 cut(s) | 119, 390, 1011, 1067, 1139, 1172, 1286, 1457, 1538 |
| TscAI | CASTG | 3 cut(s) | 457, 901, 1098 |
| TseFI | GTSAC | 2 cut(s) | 1397, 1460 |
| TseI | GCWGC | 2 cut(s) | 970, 1177 |
| Tsp45I | GTSAC | 2 cut(s) | 1397, 1460 |
| TspDTI | ATGAA | 4 cut(s) | 714, 857, 1178, 1218 |
| TspGWI | ACGGA | 2 cut(s) | 1100, 1178 |
| TspRI | CASTG | 3 cut(s) | 457, 901, 1098 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 139 |
| XapI | RAATTY | 4 cut(s) | 135, 702, 864, 1445 |
| XbaI | TCTAGA | 1 cut(s) | 572 |
| XceI | RCATGY | 2 cut(s) | 961, 1390 |
| XmiI | GTMKAC | 2 cut(s) | 1024, 1134 |
| XmnI | GAANNNNTTC | 2 cut(s) | 495, 1521 |
| XspI | CTAG | 2 cut(s) | 573, 759 |
| Zsp2I | ATGCAT | 1 cut(s) | 963 |