Rorug03G0110500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0013519
Physical Location & Seq
Forward (+)
8866208 .. 8868168
1961 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0110500.1

Sequence Viewer

Length: 1788 bp
ATGGCTTTGGCAATTTCTTTAGCTTTCCTCCTCTTCTTTCACATTTGTTCTCTTTCTCAAGGAGAAAACTTCTTGTTCAATGGCTTCAATGGAAATGATGGGAATCTGAAACTTGAAGGAGCTTCCATAGTCAAACCCTCTGGTATGATCAGACTCACTAACAAAACACGTGGTGTTATAGGCCATGCATTCTATAAGAAACCCATAACCATGTATGAAAAGAATTCCTCTTCATTCCCAAATGCTTCTTCTTTCAGTACAGAGATTGTTTTTGCCATAGTCTCCCCAAGCTCCGGCAGCGGTGGCTTTGGCCTAGCCTTCACATTGTCTCCCTCTCCGAGTTTCCCCGGGGCTCAAGCCGGCCATTACTTCGGAATTTTCAACTCTTCAAACGACAACAAATCCTCTAACCATATCCTTGCTGTAGAATTCGACACGGTCAATGGTTACAACGAGAGCTGGAATTCAGATGGAAACCATGTTGGTATTGACATCAACAGCGTCTACTCTGTGGCAAATGAACCAGCTGCTTACTACACCACAGAATCACACAAAGAAGAAGTGAAGATGGAGGGTGGTGATCTTATACATGCTTGGATAGACTATGATGGCAAAGCTCAACTTTTGAATGTGACAATATCTCCCATAAATAAGGAGAAACCAACCAAACCCCTATTGTCCTATGGTATCAATCTATCTTCTGTTTTTAAAGAGACTATGTATGCCAGCTTTTCGGCATCCACAGGAGATAACCAGTCGAGCTCTCATTACATAATCGCATGGAGTTTTGCAGTGAATGGAATTGCAAGGAGTCTCAATCTTACCGATCTTCCTATCCCACCAAAAGAGAAAAGTTCATCATCGTCTTACAGTCCCTCAATCAAGGCTCTTATTGTGGCCTTGTCTGTTTTGGTCTTCTTGTTGTTGGCAATTTTGTTCCTCTTTACATTTTATAGAAGACCGATGCCTTCTGAGACTATGGAAGATTGGGAGATTGATTGTCCTCACAGGTTCCGGTACAAGGATCTTCATGCAGCAACCAAGGGTTTTAAAGACTCTAATGTGATTGGAGCTGGCGGATTTGGTGAAGTTTACAAGGGTATTTTGCCTTCTACTGGATGTGAATTTGCAGTTAAGAAGATAACAAGAAATGGATTAATTCAAGGAATGAGGGAGTTTGCGGCGGAAATTGAGAGCTTGGGACGGCTGAGGCACAAGAACTTGGTCAATCTGGAAGAATGGGAGCAAGTTGTGATTCACAGAGATGTCAAGTCCAGCAATGTCTTGATAGATGAAGACCTGAACGCTCGGCTAAGCGACTTTGGCCTTGCAAGGCTATATGATCATGGAGAAATATCACGCACCACAGGTGTGGTTGGCACAATTGGGTACATTGCACCAGAATTAGCTCGAACAGGGAAGGCCTCAGCAGCCTCAGACGTGTTTGGATACGGCATCTTGCTCCTTGAAGTAGCTAGTGGGAAAAGACCAATCGGCTCAGGCCACTCGGATCAATTCATATTGGTGGATTGGGTGACAGAAAATCATCAAGCAGGTCGCGTACTTGACACTGTAGACCAAAAGTTGGGTCACTATGTTGTAAAAGAGATGGAGTTGGTTCTGGAGCTGGGTTTGCTTTGCTCTCACTTCAAACCAGAAGCTAGACCTACCATGAGACAACTAGTGCGATATCTCAATGGGATGAGCCGCTTCCTCATGTTGATTGTTGTGGAGATTGGAAAAATTGTATTGTATTGTATTCATTGTATTGTATTCATCTCACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

595

Amino Acids

65.4

Weight (kDa)

6.32

Isoelectric Point (pI)

38.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 23 - 277 6.4e-76 Legume lectin domain
Lectin_L-type_dom PF18483 40 - 252 5.9e-09 Legume lectin beta-barrel domain
Pkinase PF00069 351 - 414 2.8e-08 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 353 - 411 6e-06 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 415 - 563 7.4e-23 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 416 - 565 6.1e-21 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013519)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G36835
fragaria_vesca FvH4_6g16650 FvH4_6g16650 FvH4_6g16650
malus_domestica MD04G1090000.v1.1 MD12G1108500.v1.1
prunus_persica Prupe.7G126900_v2.0.a1
pyrus_communis pycom04g08510
rosa_chinensis RchiOBHm_Chr3g0470611
rosa_laevigata RLG00000024254
rosa_multiflora Rmu_sc0002115.1_g000019
rosa_roxburghii Rroxscaffold_6G00410690
rosa_rugosa Rorug03G0110500
rosa_samantha Rh3AG160600 Rh3BG185100 Rh3CG175600 Rh3DG189600
rosa_wichuraiana Rw3G015180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1544
AccB7I CCANNNNNTGG 1 cut(s) 1585
AccI GTMKAC 2 cut(s) 504, 1575
AccII CGCG 1 cut(s) 1560
AciI CCGC 5 cut(s) 300, 1077, 1181, 1184, 1708
AclWI GGATC 2 cut(s) 1032, 1518
AcoI YGGCCR 1 cut(s) 361
AcsI RAATTY 5 cut(s) 223, 375, 428, 463, 1124
AcvI CACGTG 1 cut(s) 170
AdeI CACNNNGTG 1 cut(s) 173
AfaI GTAC 4 cut(s) 259, 1019, 1391, 1563
AfiI CCNNNNNNNGG 4 cut(s) 293, 1021, 1115, 1585
AflIII ACRYGT 2 cut(s) 167, 1440
AgsI TTSAA 9 cut(s) 79, 88, 116, 382, 390, 628, 1163, 1469, 1651
AhlI ACTAGT 1 cut(s) 1681
AjiI CACGTC 1 cut(s) 1441
AjuI GAANNNNNNNTTGG 2 cut(s) 232, 264
AleI CACNNNNGTG 1 cut(s) 1370
Alw21I GWGCWC 1 cut(s) 764
Alw26I GTCTC 6 cut(s) 286, 333, 707, 818, 968, 1669
AlwI GGATC 2 cut(s) 1032, 1518
Ama87I CYCGRG 1 cut(s) 347
AoxI GGCC 7 cut(s) 181, 310, 361, 897, 1324, 1422, 1501
ApeKI GCWGC 4 cut(s) 297, 527, 1034, 1430
ApoI RAATTY 5 cut(s) 223, 375, 428, 463, 1124
ArsI GACNNNNNNTTYG 2 cut(s) 1573, 1605
AseI ATTAAT 1 cut(s) 1157
AsuC2I CCSGG 2 cut(s) 348, 349
AsuHPI GGTGA 4 cut(s) 590, 1097, 1546, 1773
AvaI CYCGRG 1 cut(s) 347
BanII GRGCYC 2 cut(s) 355, 764
BarI GAAGNNNNNNTAC 2 cut(s) 1093, 1125
BbrPI CACGTG 1 cut(s) 170
BbsI GAAGAC 3 cut(s) 907, 964, 1302
Bbv12I GWGCWC 1 cut(s) 764
BbvCI CCTCAGC 2 cut(s) 1208, 1426
BbvI GCAGC 4 cut(s) 309, 514, 1046, 1442
BccI CCATC 5 cut(s) 92, 464, 562, 602, 1603
BceAI ACGGC 2 cut(s) 1220, 1468
BciVI GTATCC 1 cut(s) 1442
BclI TGATCA 2 cut(s) 147, 1342
BcnI CCSGG 2 cut(s) 348, 349
BcoDI GTCTC 6 cut(s) 286, 333, 707, 818, 968, 1669
BcuI ACTAGT 1 cut(s) 1681
BfaI CTAG 4 cut(s) 314, 1476, 1662, 1682
BfmI CTRYAG 2 cut(s) 423, 1572
BfuAI ACCTGC 1 cut(s) 1544
BfuI GTATCC 1 cut(s) 1442
BisI GCNGC 6 cut(s) 298, 528, 1035, 1182, 1431, 1708
BlpI GCTNAGC 1 cut(s) 1313
BlsI GCNGC 6 cut(s) 299, 529, 1036, 1183, 1432, 1709
Bme1390I CCNGG 2 cut(s) 348, 349
BmeT110I CYCGRG 1 cut(s) 347
BmgBI CACGTC 1 cut(s) 1441
BmiI GGNNCC 1 cut(s) 1013
BmrFI CCNGG 2 cut(s) 348, 349
BmsI GCATC 3 cut(s) 746, 954, 1464
BpiI GAAGAC 3 cut(s) 907, 964, 1302
BpmI CTGGAG 1 cut(s) 1643
Bpu10I CCTNAGC 3 cut(s) 1208, 1426, 1498
Bpu1102I GCTNAGC 1 cut(s) 1313
BpuEI CTTGAG 2 cut(s) 42, 339
BpuMI CCSGG 2 cut(s) 348, 349
BsaAI YACGTR 1 cut(s) 170
BsaBI GATNNNNATC 1 cut(s) 102
BsaJI CCNNGG 4 cut(s) 346, 347, 348, 1041
BsaWI WCCGGW 1 cut(s) 1014
BsaXI ACNNNNNCTCC 4 cut(s) 313, 343, 625, 655
Bsc4I CCNNNNNNNGG 4 cut(s) 293, 1021, 1115, 1585
Bse118I RCCGGY 1 cut(s) 359
Bse1I ACTGG 2 cut(s) 754, 1120
Bse3DI GCAATG 2 cut(s) 1285, 1392
Bse8I GATNNNNATC 1 cut(s) 102
BseDI CCNNGG 4 cut(s) 346, 347, 348, 1041
BseGI GGATG 3 cut(s) 737, 1124, 1707
BseJI GATNNNNATC 1 cut(s) 102
BseLI CCNNNNNNNGG 4 cut(s) 293, 1021, 1115, 1585
BseMI GCAATG 2 cut(s) 1285, 1392
BseMII CTCAG 5 cut(s) 963, 1199, 1440, 1449, 1512
BseNI ACTGG 2 cut(s) 754, 1120
BseRI GAGGAG 1 cut(s) 20
BseXI GCAGC 4 cut(s) 309, 514, 1046, 1442
BseYI CCCAGC 1 cut(s) 1627
Bsh1236I CGCG 1 cut(s) 1560
BshFI GGCC 7 cut(s) 183, 312, 363, 899, 1326, 1424, 1503
BsiHKAI GWGCWC 1 cut(s) 764
BsiHKCI CYCGRG 1 cut(s) 347
BsiSI CCGG 4 cut(s) 294, 348, 360, 1015
BslFI GGGAC 2 cut(s) 858, 1215
BslI CCNNNNNNNGG 4 cut(s) 293, 1021, 1115, 1585
BsmAI GTCTC 6 cut(s) 286, 333, 707, 818, 968, 1669
BsmFI GGGAC 2 cut(s) 858, 1215
BsmI GAATGC 1 cut(s) 188
BsnI GGCC 7 cut(s) 183, 312, 363, 899, 1326, 1424, 1503
BsoBI CYCGRG 1 cut(s) 347
Bsp1286I GDGCHC 2 cut(s) 355, 764
Bsp143I GATC 6 cut(s) 147, 580, 826, 1024, 1342, 1510
Bsp1720I GCTNAGC 1 cut(s) 1313
BspACI CCGC 5 cut(s) 300, 1077, 1181, 1184, 1708
BspANI GGCC 7 cut(s) 183, 312, 363, 899, 1326, 1424, 1503
BspCNI CTCAG 5 cut(s) 964, 1200, 1439, 1448, 1511
BspFNI CGCG 1 cut(s) 1560
BspLI GGNNCC 1 cut(s) 1013
BspMI ACCTGC 1 cut(s) 1544
BspPI GGATC 2 cut(s) 1032, 1518
BsrDI GCAATG 2 cut(s) 1285, 1392
BsrFI RCCGGY 1 cut(s) 359
BsrI ACTGG 2 cut(s) 754, 1120
BssAI RCCGGY 1 cut(s) 359
BssECI CCNNGG 4 cut(s) 346, 347, 348, 1041
BssMI GATC 6 cut(s) 147, 580, 826, 1024, 1342, 1510
BssT1I CCWWGG 1 cut(s) 1041
Bst4CI ACNGT 3 cut(s) 439, 872, 1573
Bst6I CTCTTC 3 cut(s) 38, 235, 391
BstBAI YACGTR 1 cut(s) 170
BstC8I GCNNGC 3 cut(s) 361, 727, 1075
BstDEI CTNAG 6 cut(s) 972, 1208, 1313, 1426, 1435, 1498
BstF5I GGATG 3 cut(s) 737, 1124, 1707
BstFNI CGCG 1 cut(s) 1560
BstKTI GATC 6 cut(s) 150, 583, 829, 1027, 1345, 1513
BstMAI GTCTC 6 cut(s) 286, 333, 707, 818, 968, 1669
BstMBI GATC 6 cut(s) 147, 580, 826, 1024, 1342, 1510
BstMWI GCNNNNNNNGC 5 cut(s) 297, 303, 1323, 1430, 1633
BstNSI RCATGY 1 cut(s) 593
BstSCI CCNGG 2 cut(s) 346, 347
BstSFI CTRYAG 2 cut(s) 423, 1572
BstUI CGCG 1 cut(s) 1560
BstV1I GCAGC 4 cut(s) 309, 514, 1046, 1442
BstV2I GAAGAC 3 cut(s) 907, 964, 1302
BstX2I RGATCY 1 cut(s) 1024
BstXI CCANNNNNNTGG 1 cut(s) 1372
BstYI RGATCY 1 cut(s) 1024
BsuI GTATCC 1 cut(s) 1442
BsuRI GGCC 7 cut(s) 183, 312, 363, 899, 1326, 1424, 1503
BtrI CACGTC 1 cut(s) 1441
BtsCI GGATG 3 cut(s) 737, 1124, 1707
BtsI GCAGTG 1 cut(s) 798
BtsIMutI CAGTG 2 cut(s) 798, 1569
BveI ACCTGC 1 cut(s) 1544
Cac8I GCNNGC 3 cut(s) 361, 727, 1075
Cfr10I RCCGGY 1 cut(s) 359
Cfr9I CCCGGG 1 cut(s) 347
CseI GACGC 1 cut(s) 490
Csp6I GTAC 4 cut(s) 258, 1018, 1390, 1562
CspCI CAANNNNNGTGG 2 cut(s) 151, 186
CviQI GTAC 4 cut(s) 258, 1018, 1390, 1562
DdeI CTNAG 6 cut(s) 972, 1208, 1313, 1426, 1435, 1498
DpnI GATC 6 cut(s) 149, 582, 828, 1026, 1344, 1512
DpnII GATC 6 cut(s) 147, 580, 826, 1024, 1342, 1510
DraI TTTAAA 2 cut(s) 709, 1051
DraIII CACNNNGTG 1 cut(s) 173
EaeI YGGCCR 1 cut(s) 361
Eam1104I CTCTTC 3 cut(s) 38, 235, 391
EarI CTCTTC 3 cut(s) 38, 235, 391
EciI GGCGGA 2 cut(s) 1092, 1199
Ecl136II GAGCTC 1 cut(s) 762
Eco130I CCWWGG 1 cut(s) 1041
Eco147I AGGCCT 1 cut(s) 1424
Eco24I GRGCYC 2 cut(s) 355, 764
Eco32I GATATC 1 cut(s) 1691
Eco53kI GAGCTC 1 cut(s) 762
Eco72I CACGTG 1 cut(s) 170
Eco88I CYCGRG 1 cut(s) 347
EcoICRI GAGCTC 1 cut(s) 762
EcoRI GAATTC 3 cut(s) 223, 428, 463
EcoRV GATATC 1 cut(s) 1691
EcoT14I CCWWGG 1 cut(s) 1041
EcoT22I ATGCAT 1 cut(s) 190
EcoT38I GRGCYC 2 cut(s) 355, 764
ErhI CCWWGG 1 cut(s) 1041
FalI AAGNNNNNCTT 2 cut(s) 606, 638
FaqI GGGAC 2 cut(s) 858, 1215
FbaI TGATCA 2 cut(s) 147, 1342
FblI GTMKAC 2 cut(s) 504, 1575
Fnu4HI GCNGC 6 cut(s) 298, 528, 1035, 1182, 1431, 1708
FokI GGATG 3 cut(s) 724, 1131, 1714
FriOI GRGCYC 2 cut(s) 355, 764
Fsp4HI GCNGC 6 cut(s) 298, 528, 1035, 1182, 1431, 1708
FspBI CTAG 4 cut(s) 314, 1476, 1662, 1682
GluI GCNGC 6 cut(s) 298, 528, 1035, 1182, 1431, 1708
GsaI CCCAGC 1 cut(s) 1631
GsuI CTGGAG 1 cut(s) 1643
HaeIII GGCC 7 cut(s) 183, 312, 363, 899, 1326, 1424, 1503
HapII CCGG 4 cut(s) 294, 348, 360, 1015
HgaI GACGC 1 cut(s) 490
HinfI GANTC 6 cut(s) 103, 153, 545, 811, 1055, 1255
HpaII CCGG 4 cut(s) 294, 348, 360, 1015
HphI GGTGA 4 cut(s) 590, 1097, 1546, 1773
Hpy166II GTNNAC 3 cut(s) 505, 1093, 1576
Hpy188I TCNGA 8 cut(s) 108, 152, 339, 374, 469, 973, 1438, 1510
Hpy188III TCNNGA 3 cut(s) 1232, 1285, 1622
Hpy8I GTNNAC 3 cut(s) 505, 1093, 1576
HpyAV CCTTC 5 cut(s) 110, 328, 978, 1119, 1414
HpyCH4III ACNGT 3 cut(s) 439, 872, 1573
HpyCH4IV ACGT 2 cut(s) 169, 1440
HpyCH4V TGCA 7 cut(s) 188, 791, 806, 1034, 1130, 1331, 1397
HpyF10VI GCNNNNNNNGC 5 cut(s) 297, 303, 1323, 1430, 1633
HpyF3I CTNAG 6 cut(s) 972, 1208, 1313, 1426, 1435, 1498
HpySE526I ACGT 2 cut(s) 169, 1440
KroI GCCGGC 1 cut(s) 359
KroNI GCCGGC 1 cut(s) 361
Ksp22I TGATCA 2 cut(s) 147, 1342
Kzo9I GATC 6 cut(s) 147, 580, 826, 1024, 1342, 1510
LmnI GCTCC 6 cut(s) 119, 296, 1070, 1243, 1467, 1624
Lsp1109I GCAGC 4 cut(s) 309, 514, 1046, 1442
LweI GCATC 3 cut(s) 746, 954, 1464
MaeI CTAG 4 cut(s) 314, 1476, 1662, 1682
MaeII ACGT 2 cut(s) 169, 1440
MaeIII GTNAC 4 cut(s) 446, 631, 1534, 1589
MalI GATC 6 cut(s) 149, 582, 828, 1026, 1344, 1512
MboI GATC 6 cut(s) 147, 580, 826, 1024, 1342, 1510
MfeI CAATTG 1 cut(s) 1383
MflI RGATCY 1 cut(s) 1024
MhlI GDGCHC 2 cut(s) 355, 764
MlyI GAGTC 3 cut(s) 147, 820, 1049
Mph1103I ATGCAT 1 cut(s) 190
MroNI GCCGGC 1 cut(s) 359
MseI TTAA 4 cut(s) 708, 1050, 1134, 1157
MslI CAYNNNNRTG 4 cut(s) 209, 1263, 1370, 1523
MspA1I CMGCKG 2 cut(s) 300, 527
MspI CCGG 4 cut(s) 294, 348, 360, 1015
MspR9I CCNGG 2 cut(s) 348, 349
MunI CAATTG 1 cut(s) 1383
Mva1269I GAATGC 1 cut(s) 188
MvnI CGCG 1 cut(s) 1560
MwoI GCNNNNNNNGC 5 cut(s) 297, 303, 1323, 1430, 1633
NaeI GCCGGC 1 cut(s) 361
NciI CCSGG 2 cut(s) 348, 349
NdeII GATC 6 cut(s) 147, 580, 826, 1024, 1342, 1510
NgoMIV GCCGGC 1 cut(s) 359
NlaIV GGNNCC 1 cut(s) 1013
NmeAIII GCCGAG 1 cut(s) 1288
NmuCI GTSAC 3 cut(s) 631, 1534, 1589
NsiI ATGCAT 1 cut(s) 190
NspI RCATGY 1 cut(s) 593
OliI CACNNNNGTG 1 cut(s) 1370
PceI AGGCCT 1 cut(s) 1424
PctI GAATGC 1 cut(s) 188
PdiI GCCGGC 1 cut(s) 361
PfeI GAWTC 3 cut(s) 103, 545, 1255
PflFI GACNNNGTC 1 cut(s) 437
PflMI CCANNNNNTGG 1 cut(s) 1585
PkrI GCNGC 6 cut(s) 299, 529, 1036, 1183, 1432, 1709
PleI GAGTC 3 cut(s) 147, 819, 1049
PmaCI CACGTG 1 cut(s) 170
PmlI CACGTG 1 cut(s) 170
PpsI GAGTC 3 cut(s) 147, 819, 1049
Ppu21I YACGTR 1 cut(s) 170
PshBI ATTAAT 1 cut(s) 1157
Psp124BI GAGCTC 1 cut(s) 764
PspCI CACGTG 1 cut(s) 170
PspFI CCCAGC 1 cut(s) 1627
PspN4I GGNNCC 1 cut(s) 1013
PsuI RGATCY 1 cut(s) 1024
PsyI GACNNNGTC 1 cut(s) 437
PvuII CAGCTG 1 cut(s) 527
RsaI GTAC 4 cut(s) 259, 1019, 1391, 1563
RsaNI GTAC 4 cut(s) 258, 1018, 1390, 1562
RseI CAYNNNNRTG 4 cut(s) 209, 1263, 1370, 1523
SacI GAGCTC 1 cut(s) 764
SaqAI TTAA 4 cut(s) 708, 1050, 1134, 1157
SatI GCNGC 6 cut(s) 298, 528, 1035, 1182, 1431, 1708
Sau3AI GATC 6 cut(s) 147, 580, 826, 1024, 1342, 1510
SchI GAGTC 3 cut(s) 147, 820, 1049
ScrFI CCNGG 2 cut(s) 348, 349
SduI GDGCHC 2 cut(s) 355, 764
SfaNI GCATC 3 cut(s) 746, 954, 1464
SfcI CTRYAG 2 cut(s) 423, 1572
SmaI CCCGGG 1 cut(s) 349
SmiMI CAYNNNNRTG 4 cut(s) 209, 1263, 1370, 1523
SmlI CTYRAG 2 cut(s) 57, 354
SmoI CTYRAG 2 cut(s) 57, 354
SpeI ACTAGT 1 cut(s) 1681
SseBI AGGCCT 1 cut(s) 1424
SsiI CCGC 5 cut(s) 300, 1077, 1181, 1184, 1708
SspMI CTAG 4 cut(s) 314, 1476, 1662, 1682
SstI GAGCTC 1 cut(s) 764
StuI AGGCCT 1 cut(s) 1424
StyD4I CCNGG 2 cut(s) 346, 347
StyI CCWWGG 1 cut(s) 1041
TaaI ACNGT 3 cut(s) 439, 872, 1573
TaiI ACGT 2 cut(s) 172, 1443
TaqI TCGA 3 cut(s) 432, 758, 1411
TaqII GACCGA 1 cut(s) 976
TatI WGTACW 1 cut(s) 257
TauI GCSGC 2 cut(s) 1184, 1710
TfiI GAWTC 3 cut(s) 103, 545, 1255
Tru1I TTAA 4 cut(s) 708, 1050, 1134, 1157
Tru9I TTAA 4 cut(s) 708, 1050, 1134, 1157
TscAI CASTG 2 cut(s) 798, 1576
TseFI GTSAC 3 cut(s) 631, 1534, 1589
TseI GCWGC 4 cut(s) 297, 527, 1034, 1430
Tsp45I GTSAC 3 cut(s) 631, 1534, 1589
TspDTI ATGAA 9 cut(s) 222, 231, 534, 846, 1019, 1308, 1507, 1751, 1765
TspMI CCCGGG 1 cut(s) 347
TspRI CASTG 2 cut(s) 798, 1576
Tth111I GACNNNGTC 1 cut(s) 437
Van91I CCANNNNNTGG 1 cut(s) 1585
VspI ATTAAT 1 cut(s) 1157
XapI RAATTY 5 cut(s) 223, 375, 428, 463, 1124
XceI RCATGY 1 cut(s) 593
XmaI CCCGGG 1 cut(s) 347
XmiI GTMKAC 2 cut(s) 504, 1575
XspI CTAG 4 cut(s) 314, 1476, 1662, 1682
Zsp2I ATGCAT 1 cut(s) 190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.