Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0009791

Physical Location & Seq

Genomic Coordinates Forward (+)

14746427 .. 14748591

Gene Structure 2165 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0174400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGCTCCGATCACTAAAGAATGAGGCTTGGGAGCTCTTCTGCAAAAAAGCATTTTCATCTAATGAGCACAAAACTTGTCCACCCGATTTTGTGTCGTTAGCTTGCCAACTTGTGGAAAAGTGTGAAGGCCTTCCTCTGGCTATTGTGGCTTTAGGTGGTCTTATGTCTTCCAAGAAGTCGCTGGATCAATGGCAGCAAGTCTGCAACAGCTTGAATTGGCATCTAGATCACAGTCCATTGCTAGACCCTGTGAAAAATATCTTGTTTCTGAGTGTCAATGATTTGCCATCTCAATTGAAACATTGCTTCCTCTATTTCTCTCTATTCCCAGAAGATTTTGTAATTAAAAGAAAAAGGCTCGTTAGATTGTGGATGGCCGAAGGATTTGTTGAACATGTGAAAGGGATCACACCAGAAGAAGTTGCAGATGACTATCTTATGGAGCTCTGTTTCCGTAGTGTGTTACAAGTTGTAAAGAGAAATAATACAGGAAGGCCGAAACAAGTTAAGATGCATGATCTGATGCGAGAGCTTGCTTTGTCGACAGCCGAGAAGGAAAAGTTTGGTCATGTATACGACGGGAGAGAAGTAATGGAAGACATCTCAACCCGTCGCTTGTCAATTGACAGAATGGAAGGAGAAATTAAATCATGCCCGGGTATGTCAAACATTCGTTCTCTTCTAGTATTTGCCCCTAACATGTCCTCATTGTGTTTCTCAAATACAATGCTTTCTCGGTTCAAATTGTTGAGGACTCTAGAGTTGCAGGAAGTCCAAATTGATAAACTGCCGGGTGCAGTTGTTTACTTGTTCAACTTGAGATATTTAAATTTGAAGGGCACTTTAATCAAGCAACTTCCAGAGTCCATAGGGCGTCTCCGCAACCTTCAATTACTGAACGTCAAGGATACTAAGATAGAGTCACTTCCACAAGGAATTGCAAAGTTGCTGAACCTGCGCCATCTACTTATGTATCGCTACACTGGAAACTATCTGGACTTCAATTATGTGAGTGGGATGAGAGTGCCATCAAATATTTCTCAGTTGCAGAAACTGCAGACTTTATCGATGATTGAATCAGAAGGGGACACTATTAGACTTATGGGCAACCTGACTCAACTTAAGAGCATCGGCATATCGAATGTGAAAGAAAGAGACGAGATTGACCTTTGGGTCTCAATCGAAAAGTTGAATCTGCTTCAATCTGTGGTTTTAATGGCAAGTAATGAAGAGGAAATCCTTCCCGTGAAAGCACAATGTCCACGTCTTCCGCGCCTTCGAATACTTTATTTGACTGGCAGATTGCAAAAGGCAGTACCTTGGTTTTCTTCACTGCAGAGCCTCGCACGTCTGTGTCTGCGTTGGTCTAGACTTGAAGAGGATTTACTACCTCAAATTGAAGCACTGCCCAATCTGACATGGCTTGATCTTTGGAATTCATATGTTGGGGAAGAGTTGTGTTTCCGCAAAGGCTTTGTAAAGTTGGAGAGGTTGGAGTTGTTCAATTTTGCCTCGGTGAAAAAGATAAGTATAGAACAAGGGGTGATGCCAAATCTCCGGTACTTATGGGTTAAAAACTGCATGGAGTTGAAGACAGTGCCATTGGGCCTTGAATACCTTTCTAATCTACAATCTTTGGCTCTGGAATTTGTTCCCACTGAAATTTTACAGCCCATTCGGATAGGAGGTGCGGATCGGTATAAGATACAACACATTCCTGAGATCATACATGTTTTCGAAGAGTCATCCAAGCAGGTCTATGAAAACTTGGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PC-Esterase PMR5N

Protein Analysis

591

Amino Acids

68.16

Weight (kDa)

8.62

Isoelectric Point (pI)

58.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_DRP	PF23559	108 - 179	1.6e-22	Disease resistance protein Winged helix domain
LRR_14	PF23598	224 - 550	2.7e-42	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009791)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12060 AT5G06700
fragaria_vesca	FvH4_6g22040
malus_domestica	MD12G1055700.v1.1 MD14G1054900.v1.1
prunus_persica	Prupe.7G079400_v2.0.a1
pyrus_communis	pycom12g04850 pycom14g04530
rosa_chinensis	RchiOBHm_Chr3g0479331
rosa_laevigata	RLG00000023584
rosa_multiflora	Rmu_co8488735.1_g000001 Rmu_sc0006763.1_g000008 Rmu_sc0006763.1_g000009
rosa_roxburghii	Rroxscaffold_6G00402410
rosa_rugosa	Rorug03G0174400 Rorug03G0174500
rosa_samantha	Rh3AG225400 Rh3BG258200 Rh3CG254000 Rh3DG249800
rosa_wichuraiana	Rw3G020160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1172
Acc36I	ACCTGC	2 cut(s)	963, 1744
AccB7I	CCANNNNNTGG	1 cut(s)	112
AccI	GTMKAC	2 cut(s)	542, 573
AccII	CGCG	1 cut(s)	1273
AciI	CCGC	4 cut(s)	880, 1271, 1465, 1691
AclWI	GGATC	3 cut(s)	192, 413, 1701
AcoI	YGGCCR	1 cut(s)	375
AcsI	RAATTY	4 cut(s)	829, 1435, 1646, 1662
AcyI	GRCGYC	1 cut(s)	874
AfaI	GTAC	2 cut(s)	1317, 1562
AfiI	CCNNNNNNNGG	2 cut(s)	112, 136
AflII	CTTAAG	1 cut(s)	1121
AflIII	ACRYGT	3 cut(s)	394, 699, 1729
AjiI	CACGTC	2 cut(s)	1265, 1349
AleI	CACNNNNGTG	1 cut(s)	1351
AluBI	AGCT	5 cut(s)	34, 101, 210, 445, 532
AluI	AGCT	5 cut(s)	34, 101, 210, 445, 532
Alw21I	GWGCWC	3 cut(s)	36, 69, 447
Alw26I	GTCTC	3 cut(s)	881, 1149, 1180
AlwI	GGATC	3 cut(s)	192, 413, 1701
AlwNI	CAGNNNCTG	1 cut(s)	1054
Ama87I	CYCGRG	1 cut(s)	655
AoxI	GGCC	5 cut(s)	127, 375, 494, 1606, 1770
ApeKI	GCWGC	1 cut(s)	193
ApoI	RAATTY	4 cut(s)	829, 1435, 1646, 1662
Asp700I	GAANNNNTTC	3 cut(s)	129, 1239, 1650
AspLEI	GCGC	2 cut(s)	960, 1275
AspS9I	GGNCC	1 cut(s)	1606
AsuC2I	CCSGG	3 cut(s)	656, 657, 792
AsuHPI	GGTGA	2 cut(s)	1528, 1555
AsuII	TTCGAA	2 cut(s)	1279, 1737
AvaI	CYCGRG	1 cut(s)	655
BaeGI	GKGCMC	1 cut(s)	842
BaeI	ACNNNNGTAYC	2 cut(s)	956, 989
BanII	GRGCYC	2 cut(s)	36, 447
BarI	GAAGNNNNNNTAC	2 cut(s)	1368, 1400
BbsI	GAAGAC	4 cut(s)	159, 603, 1259, 1598
Bbv12I	GWGCWC	3 cut(s)	36, 69, 447
BbvI	GCAGC	1 cut(s)	205
BccI	CCATC	4 cut(s)	295, 367, 969, 1036
BciVI	GTATCC	1 cut(s)	901
BcnI	CCSGG	3 cut(s)	656, 657, 792
BcoDI	GTCTC	3 cut(s)	881, 1149, 1180
BfaI	CTAG	6 cut(s)	224, 242, 683, 758, 1368, 1774
BfmI	CTRYAG	2 cut(s)	1055, 1334
BfrI	CTTAAG	1 cut(s)	1121
BfuAI	ACCTGC	2 cut(s)	963, 1744
BfuI	GTATCC	1 cut(s)	901
BisI	GCNGC	1 cut(s)	194
BlsI	GCNGC	1 cut(s)	195
Bme1390I	CCNGG	3 cut(s)	656, 657, 792
BmeT110I	CYCGRG	1 cut(s)	655
BmgBI	CACGTC	2 cut(s)	1265, 1349
BmgT120I	GGNCC	1 cut(s)	1606
BmrFI	CCNGG	3 cut(s)	656, 657, 792
BmsI	GCATC	5 cut(s)	229, 501, 513, 1137, 1536
BpiI	GAAGAC	4 cut(s)	159, 603, 1259, 1598
Bpu14I	TTCGAA	2 cut(s)	1279, 1737
BpuEI	CTTGAG	1 cut(s)	838
BpuMI	CCSGG	3 cut(s)	656, 657, 792
Bsa29I	ATCGAT	1 cut(s)	1067
BsaBI	GATNNNNATC	1 cut(s)	432
BsaHI	GRCGYC	1 cut(s)	874
BsaI	GGTCTC	1 cut(s)	1180
BsaJI	CCNNGG	3 cut(s)	655, 1319, 1512
BsaWI	WCCGGW	1 cut(s)	1557
Bsc4I	CCNNNNNNNGG	2 cut(s)	112, 136
Bse1I	ACTGG	2 cut(s)	988, 1300
Bse3DI	GCAATG	2 cut(s)	236, 301
Bse8I	GATNNNNATC	1 cut(s)	432
BseCI	ATCGAT	1 cut(s)	1067
BseDI	CCNNGG	3 cut(s)	655, 1319, 1512
BseGI	GGATG	3 cut(s)	378, 1023, 1745
BseJI	GATNNNNATC	1 cut(s)	432
BseLI	CCNNNNNNNGG	2 cut(s)	112, 136
BseMI	GCAATG	2 cut(s)	236, 301
BseMII	CTCAG	3 cut(s)	260, 1055, 1710
BseNI	ACTGG	2 cut(s)	988, 1300
BseSI	GKGCMC	1 cut(s)	842
BseXI	GCAGC	1 cut(s)	205
BsgI	GTGCAG	1 cut(s)	816
Bsh1236I	CGCG	1 cut(s)	1273
BshFI	GGCC	5 cut(s)	129, 377, 496, 1608, 1772
BshVI	ATCGAT	1 cut(s)	1067
BsiHKAI	GWGCWC	3 cut(s)	36, 69, 447
BsiHKCI	CYCGRG	1 cut(s)	655
BsiSI	CCGG	3 cut(s)	656, 791, 1558
BslFI	GGGAC	1 cut(s)	1100
BslI	CCNNNNNNNGG	2 cut(s)	112, 136
BsmAI	GTCTC	3 cut(s)	881, 1149, 1180
BsmBI	CGTCTC	2 cut(s)	881, 1149
BsmFI	GGGAC	1 cut(s)	1100
BsnI	GGCC	5 cut(s)	129, 377, 496, 1608, 1772
Bso31I	GGTCTC	1 cut(s)	1180
BsoBI	CYCGRG	1 cut(s)	655
Bsp119I	TTCGAA	2 cut(s)	1279, 1737
Bsp1286I	GDGCHC	4 cut(s)	36, 69, 447, 842
Bsp143I	GATC	8 cut(s)	8, 184, 226, 405, 517, 1426, 1693, 1722
BspACI	CCGC	4 cut(s)	880, 1271, 1465, 1691
BspANI	GGCC	5 cut(s)	129, 377, 496, 1608, 1772
BspCNI	CTCAG	3 cut(s)	261, 1054, 1711
BspDI	ATCGAT	1 cut(s)	1067
BspFNI	CGCG	1 cut(s)	1273
BspMAI	CTGCAG	2 cut(s)	1059, 1338
BspMI	ACCTGC	2 cut(s)	963, 1744
BspPI	GGATC	3 cut(s)	192, 413, 1701
BspQI	GCTCTTC	1 cut(s)	41
BspT104I	TTCGAA	2 cut(s)	1279, 1737
BspTI	CTTAAG	1 cut(s)	1121
BspTNI	GGTCTC	1 cut(s)	1180
BsrDI	GCAATG	2 cut(s)	236, 301
BsrI	ACTGG	2 cut(s)	988, 1300
BssECI	CCNNGG	3 cut(s)	655, 1319, 1512
BssMI	GATC	8 cut(s)	8, 184, 226, 405, 517, 1426, 1693, 1722
BssNAI	GTATAC	1 cut(s)	574
BssNI	GRCGYC	1 cut(s)	874
BssT1I	CCWWGG	1 cut(s)	1319
Bst1107I	GTATAC	1 cut(s)	574
Bst4CI	ACNGT	2 cut(s)	233, 1597
Bst6I	CTCTTC	6 cut(s)	41, 684, 1224, 1371, 1446, 1734
BstACI	GRCGYC	1 cut(s)	874
BstAFI	CTTAAG	1 cut(s)	1121
BstAPI	GCANNNNNTGC	1 cut(s)	1054
BstBI	TTCGAA	2 cut(s)	1279, 1737
BstC8I	GCNNGC	2 cut(s)	103, 534
BstDEI	CTNAG	4 cut(s)	269, 912, 1041, 1719
BstF5I	GGATG	3 cut(s)	378, 1023, 1745
BstFNI	CGCG	1 cut(s)	1273
BstHHI	GCGC	2 cut(s)	960, 1275
BstKTI	GATC	8 cut(s)	11, 187, 229, 408, 520, 1429, 1696, 1725
BstMAI	GTCTC	3 cut(s)	881, 1149, 1180
BstMBI	GATC	8 cut(s)	8, 184, 226, 405, 517, 1426, 1693, 1722
BstMWI	GCNNNNNNNGC	3 cut(s)	146, 955, 1054
BstNSI	RCATGY	3 cut(s)	398, 703, 1733
BstSCI	CCNGG	3 cut(s)	654, 655, 790
BstSFI	CTRYAG	2 cut(s)	1055, 1334
BstSLI	GKGCMC	1 cut(s)	842
BstUI	CGCG	1 cut(s)	1273
BstV1I	GCAGC	1 cut(s)	205
BstV2I	GAAGAC	4 cut(s)	159, 603, 1259, 1598
BstZ17I	GTATAC	1 cut(s)	574
Bsu15I	ATCGAT	1 cut(s)	1067
BsuI	GTATCC	1 cut(s)	901
BsuRI	GGCC	5 cut(s)	129, 377, 496, 1608, 1772
BsuTUI	ATCGAT	1 cut(s)	1067
BtrI	CACGTC	2 cut(s)	1265, 1349
BtsCI	GGATG	3 cut(s)	378, 1023, 1745
BtsI	GCAGTG	2 cut(s)	1331, 1403
BtsIMutI	CAGTG	5 cut(s)	981, 1331, 1403, 1602, 1656
BveI	ACCTGC	2 cut(s)	963, 1744
Cac8I	GCNNGC	2 cut(s)	103, 534
CaiI	CAGNNNCTG	1 cut(s)	1054
CfoI	GCGC	2 cut(s)	960, 1275
Cfr13I	GGNCC	1 cut(s)	1606
Cfr9I	CCCGGG	1 cut(s)	655
ClaI	ATCGAT	1 cut(s)	1067
CseI	GACGC	1 cut(s)	863
Csp6I	GTAC	2 cut(s)	1316, 1561
CviAII	CATG	8 cut(s)	395, 515, 569, 651, 700, 1419, 1582, 1730
CviQI	GTAC	2 cut(s)	1316, 1561
DdeI	CTNAG	4 cut(s)	269, 912, 1041, 1719
DpnI	GATC	8 cut(s)	10, 186, 228, 407, 519, 1428, 1695, 1724
DpnII	GATC	8 cut(s)	8, 184, 226, 405, 517, 1426, 1693, 1722
DraI	TTTAAA	1 cut(s)	828
DrdI	GACNNNNNNGTC	1 cut(s)	1172
DseDI	GACNNNNNNGTC	1 cut(s)	1172
EaeI	YGGCCR	1 cut(s)	375
Eam1104I	CTCTTC	6 cut(s)	41, 684, 1224, 1371, 1446, 1734
EarI	CTCTTC	6 cut(s)	41, 684, 1224, 1371, 1446, 1734
Ecl136II	GAGCTC	2 cut(s)	34, 445
Eco130I	CCWWGG	1 cut(s)	1319
Eco147I	AGGCCT	1 cut(s)	129
Eco24I	GRGCYC	2 cut(s)	36, 447
Eco31I	GGTCTC	1 cut(s)	1180
Eco53kI	GAGCTC	2 cut(s)	34, 445
Eco88I	CYCGRG	1 cut(s)	655
EcoICRI	GAGCTC	2 cut(s)	34, 445
EcoRI	GAATTC	1 cut(s)	1435
EcoT14I	CCWWGG	1 cut(s)	1319
EcoT22I	ATGCAT	1 cut(s)	516
EcoT38I	GRGCYC	2 cut(s)	36, 447
ErhI	CCWWGG	1 cut(s)	1319
Esp3I	CGTCTC	2 cut(s)	881, 1149
FaeI	CATG	8 cut(s)	398, 518, 572, 654, 703, 1422, 1585, 1733
FaqI	GGGAC	1 cut(s)	1100
FatI	CATG	8 cut(s)	394, 514, 568, 650, 699, 1418, 1581, 1729
FauNDI	CATATG	1 cut(s)	1441
FblI	GTMKAC	2 cut(s)	542, 573
Fnu4HI	GCNGC	1 cut(s)	194
FokI	GGATG	3 cut(s)	385, 1030, 1732
FriOI	GRGCYC	2 cut(s)	36, 447
Fsp4HI	GCNGC	1 cut(s)	194
FspBI	CTAG	6 cut(s)	224, 242, 683, 758, 1368, 1774
GlaI	GCGC	2 cut(s)	959, 1274
GluI	GCNGC	1 cut(s)	194
HaeIII	GGCC	5 cut(s)	129, 377, 496, 1608, 1772
HapII	CCGG	3 cut(s)	656, 791, 1558
HgaI	GACGC	1 cut(s)	863
HhaI	GCGC	2 cut(s)	960, 1275
Hin1I	GRCGYC	1 cut(s)	874
Hin1II	CATG	8 cut(s)	398, 518, 572, 654, 703, 1422, 1585, 1733
Hin6I	GCGC	2 cut(s)	958, 1273
HinP1I	GCGC	2 cut(s)	958, 1273
HincII	GTYRAC	1 cut(s)	543
HindII	GTYRAC	1 cut(s)	543
HinfI	GANTC	7 cut(s)	754, 863, 920, 1076, 1114, 1192, 1742
HpaII	CCGG	3 cut(s)	656, 791, 1558
HphI	GGTGA	2 cut(s)	1528, 1555
Hpy166II	GTNNAC	5 cut(s)	80, 543, 574, 805, 1262
Hpy188I	TCNGA	6 cut(s)	8, 270, 522, 1081, 1416, 1680
Hpy188III	TCNNGA	7 cut(s)	224, 758, 860, 995, 1368, 1643, 1718
Hpy8I	GTNNAC	5 cut(s)	80, 543, 574, 805, 1262
Hpy99I	CGWCG	2 cut(s)	581, 615
HpyCH4III	ACNGT	2 cut(s)	233, 1597
HpyCH4IV	ACGT	3 cut(s)	900, 1264, 1348
HpyF10VI	GCNNNNNNNGC	3 cut(s)	146, 955, 1054
HpyF3I	CTNAG	4 cut(s)	269, 912, 1041, 1719
HpySE526I	ACGT	3 cut(s)	900, 1264, 1348
Hsp92I	GRCGYC	1 cut(s)	874
Hsp92II	CATG	8 cut(s)	398, 518, 572, 654, 703, 1422, 1585, 1733
HspAI	GCGC	2 cut(s)	958, 1273
Kzo9I	GATC	8 cut(s)	8, 184, 226, 405, 517, 1426, 1693, 1722
LguI	GCTCTTC	1 cut(s)	41
LmnI	GCTCC	3 cut(s)	9, 31, 442
Lsp1109I	GCAGC	1 cut(s)	205
LweI	GCATC	5 cut(s)	229, 501, 513, 1137, 1536
MaeI	CTAG	6 cut(s)	224, 242, 683, 758, 1368, 1774
MaeII	ACGT	3 cut(s)	900, 1264, 1348
MaeIII	GTNAC	2 cut(s)	462, 921
MalI	GATC	8 cut(s)	10, 186, 228, 407, 519, 1428, 1695, 1724
MboI	GATC	8 cut(s)	8, 184, 226, 405, 517, 1426, 1693, 1722
MfeI	CAATTG	2 cut(s)	293, 621
MhlI	GDGCHC	4 cut(s)	36, 69, 447, 842
MlyI	GAGTC	5 cut(s)	748, 872, 929, 1108, 1751
MmeI	TCCRAC	2 cut(s)	1464, 1473
Mph1103I	ATGCAT	1 cut(s)	516
MroXI	GAANNNNTTC	3 cut(s)	129, 1239, 1650
MseI	TTAA	8 cut(s)	345, 507, 645, 827, 845, 1122, 1214, 1572
MslI	CAYNNNNRTG	1 cut(s)	1351
MspCI	CTTAAG	1 cut(s)	1121
MspI	CCGG	3 cut(s)	656, 791, 1558
MspR9I	CCNGG	3 cut(s)	656, 657, 792
MunI	CAATTG	2 cut(s)	293, 621
MvnI	CGCG	1 cut(s)	1273
MwoI	GCNNNNNNNGC	3 cut(s)	146, 955, 1054
NciI	CCSGG	3 cut(s)	656, 657, 792
NdeI	CATATG	1 cut(s)	1441
NdeII	GATC	8 cut(s)	8, 184, 226, 405, 517, 1426, 1693, 1722
NlaIII	CATG	8 cut(s)	398, 518, 572, 654, 703, 1422, 1585, 1733
NmeAIII	GCCGAG	1 cut(s)	574
NmuCI	GTSAC	1 cut(s)	921
NsiI	ATGCAT	1 cut(s)	516
NspI	RCATGY	3 cut(s)	398, 703, 1733
NspV	TTCGAA	2 cut(s)	1279, 1737
OliI	CACNNNNGTG	1 cut(s)	1351
PceI	AGGCCT	1 cut(s)	129
PciI	ACATGT	3 cut(s)	394, 699, 1729
PciSI	GCTCTTC	1 cut(s)	41
PdmI	GAANNNNTTC	3 cut(s)	129, 1239, 1650
PfeI	GAWTC	2 cut(s)	1076, 1192
PflMI	CCANNNNNTGG	1 cut(s)	112
PkrI	GCNGC	1 cut(s)	195
PleI	GAGTC	5 cut(s)	748, 871, 928, 1108, 1750
PpsI	GAGTC	5 cut(s)	748, 871, 928, 1108, 1750
PscI	ACATGT	3 cut(s)	394, 699, 1729
Psp124BI	GAGCTC	2 cut(s)	36, 447
PspPI	GGNCC	1 cut(s)	1606
PstI	CTGCAG	2 cut(s)	1059, 1338
PstNI	CAGNNNCTG	1 cut(s)	1054
RsaI	GTAC	2 cut(s)	1317, 1562
RsaNI	GTAC	2 cut(s)	1316, 1561
RseI	CAYNNNNRTG	1 cut(s)	1351
SacI	GAGCTC	2 cut(s)	36, 447
SalI	GTCGAC	1 cut(s)	541
SapI	GCTCTTC	1 cut(s)	41
SaqAI	TTAA	8 cut(s)	345, 507, 645, 827, 845, 1122, 1214, 1572
SatI	GCNGC	1 cut(s)	194
Sau3AI	GATC	8 cut(s)	8, 184, 226, 405, 517, 1426, 1693, 1722
Sau96I	GGNCC	1 cut(s)	1606
SchI	GAGTC	5 cut(s)	748, 872, 929, 1108, 1751
ScrFI	CCNGG	3 cut(s)	656, 657, 792
SduI	GDGCHC	4 cut(s)	36, 69, 447, 842
SfaNI	GCATC	5 cut(s)	229, 501, 513, 1137, 1536
SfcI	CTRYAG	2 cut(s)	1055, 1334
SfuI	TTCGAA	2 cut(s)	1279, 1737
SmaI	CCCGGG	1 cut(s)	657
SmiI	ATTTAAAT	1 cut(s)	828
SmiMI	CAYNNNNRTG	1 cut(s)	1351
SmlI	CTYRAG	2 cut(s)	817, 1121
SmoI	CTYRAG	2 cut(s)	817, 1121
SseBI	AGGCCT	1 cut(s)	129
SsiI	CCGC	4 cut(s)	880, 1271, 1465, 1691
SspI	AATATT	1 cut(s)	1036
SspMI	CTAG	6 cut(s)	224, 242, 683, 758, 1368, 1774
SstI	GAGCTC	2 cut(s)	36, 447
StuI	AGGCCT	1 cut(s)	129
StyD4I	CCNGG	3 cut(s)	654, 655, 790
StyI	CCWWGG	1 cut(s)	1319
SwaI	ATTTAAAT	1 cut(s)	828
TaaI	ACNGT	2 cut(s)	233, 1597
TaiI	ACGT	3 cut(s)	903, 1267, 1351
TaqI	TCGA	6 cut(s)	542, 1067, 1139, 1182, 1279, 1737
TfiI	GAWTC	2 cut(s)	1076, 1192
Tru1I	TTAA	8 cut(s)	345, 507, 645, 827, 845, 1122, 1214, 1572
Tru9I	TTAA	8 cut(s)	345, 507, 645, 827, 845, 1122, 1214, 1572
TscAI	CASTG	5 cut(s)	988, 1338, 1410, 1602, 1663
TseFI	GTSAC	1 cut(s)	921
TseI	GCWGC	1 cut(s)	193
Tsp45I	GTSAC	1 cut(s)	921
TspDTI	ATGAA	4 cut(s)	45, 1242, 1428, 1776
TspGWI	ACGGA	1 cut(s)	443
TspMI	CCCGGG	1 cut(s)	655
TspRI	CASTG	5 cut(s)	988, 1338, 1410, 1602, 1663
Van91I	CCANNNNNTGG	1 cut(s)	112
Vha464I	CTTAAG	1 cut(s)	1121
XapI	RAATTY	4 cut(s)	829, 1435, 1646, 1662
XbaI	TCTAGA	3 cut(s)	223, 757, 1367
XceI	RCATGY	3 cut(s)	398, 703, 1733
XcmI	CCANNNNNNNNNTGG	1 cut(s)	178
XmaI	CCCGGG	1 cut(s)	655
XmiI	GTMKAC	2 cut(s)	542, 573
XmnI	GAANNNNTTC	3 cut(s)	129, 1239, 1650
XspI	CTAG	6 cut(s)	224, 242, 683, 758, 1368, 1774
Zsp2I	ATGCAT	1 cut(s)	516

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.