Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0009791

Physical Location & Seq

Genomic Coordinates Forward (+)

23214419 .. 23217786

Gene Structure 3368 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG225400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGGCTGAGGCAACAAAGCACAACAACCTACCCATCAATGGTGGAACATTGATCTCAGACATGAAGAGCCTCTTCTCCATCATCAAAACCAGAAGAACTGTTGCCTTCGCCTATGGCTTCATGTTTGCCTTTGTTGTCTTCACTGTTTTCTTGGCCTTCAATCCAAACCCCAACTCTGGTGCTCCTTGGTTCACTAACATATTCAGCACCAGCAGCACTGCTACTACTTCTGGTAGTGGATCTCAGTTCTCTTCCTTTTTCTCTTCTTTCTTCTACCCCAATGCTTCTTCTTCCTCCTCCCAACAGTTCCAAAGTTCTGTTCCTTCTCCACAAACACAGCCATCTAGATCTAGTAACACCACTGTGAATAAACAACCGCCGAGCCAAACTCAGCCCATTGTGAATTCTGATAAACCACAAGTTTTGAGCCCAAATCAGACATCAGATTCCCCATCTAACGCTTCCTTAGCGACCCAGGACAGTTCAAGTTTGCCTAAACAAACCCTTGTGAAAAACCAAACTCAGACCACCCCAAATTCTGATAAGGCCACAGTTTTAGAGGCAAATCAGACCACAATTGCCGCCCCAATAATTCCGGTGGCGGTGCCGGTGCCGGTGCCGGTGCCGGCCAATAAGACCACGAGTTCACCTCCGAAATCGGGTTCCAGTGGGAAGAACGACCCTAAGAGTGTTGCTGAGAAGGGTGTGACATCGAATTATACGGATGTGTTGAAGAAACAGAGCAATGAAACAAAATCCAGTGTGTCGGTGAAGGAGGGGAAGGATGATTTGATCAAGTCTTTGTTGAGTTGTGATTTGTTTCACGGGGAATGGGTCGAGGATGATTCATACCCTCTTTACGAACCTGGGTCTTGTCCTTTGATTGATGAGCAGTTCAATTGTATTCGTAATGGTAGACCTGATAAGGATTATCAGAAATTCAAATGGCAGCCTAAGGATTGCAATCTCCCAAGGTTGGATGGAAGTCATATGTTAGAGTTATTGAGAGGAAAGCGCTTGGTTTTTGTTGGTGATTCTCTGAACAGGAATATGTGGGAATCTCTGGTTTGCATTTTAAGAAACTCAGCAAAAGATAAAAGCAAGGTTTATGAAGCCCATGGAAGAACCCATTTTCGTGGGGAAGCTTCATACTCGTTCATATTCAAAGACTATAGTTGCACAGTGGAGTTCTTTGTTTCTCCCTTCTTAGTTCGAGAATGGGAAATGCCGGATAAAGATGGATCGAAGAAAGAAACACTTCGTCTTGATTTAGTCGGGCGATCATCCAATCTATACAAAGATGCAGATATTCTCATCTTCAACACTGGACACTGGTGGACACATGACAAAACCGCGAAAGGGAAAGACTATTACCAAGAAGGTAGCCATGTTTATGGTGAATTGAATGTTCTGGAGGCATTTCGGAAAGCTTTGACTACGTGGTCCAGATGGGTTGATGCTAGTGTTGACACGGGGAAAAGTATGGTATTCTTTCGGGGTTATTCTGCCTCCCATTTCAGTGGTGGACAATGGAATTCCGGTGGGCAATGTGACAGTGAGACTCTACCTATCTTTAACGAGACTTATTTAAGGCCATACCCGCCAAAGATGCTGGTACTTGAGAAGGTGTTGAAAAACATGAAACACCACATCACCTATCTCAATATCACAAGATTGACCGATTTTCGGAAGGATGGCCACCCATCAATCTACCGGAAGCAAAACCTTTCCCCAGCAGAAAGGAAATCCCCAAAAAGCTTCCAGGACTGCAGCCATTGGTGCCTTCCAGGTGTTCCAGATGCATGGAATGAAGTTCTTTATGCCGAGCTCCTAGTAAAACTGCACAAGAAGAATCTGCATCAGCAACTGCAACAGCAGAAGAAGAGAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PC-Esterase PMR5N

Protein Analysis

630

Amino Acids

70.63

Weight (kDa)

9.11

Isoelectric Point (pI)

45.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMR5N	PF14416	270 - 322	5.6e-24	PMR5 N terminal Domain
PC-Esterase	PF13839	323 - 608	1.3e-98	GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009791)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12060 AT5G06700
fragaria_vesca	FvH4_6g22040
malus_domestica	MD12G1055700.v1.1 MD14G1054900.v1.1
prunus_persica	Prupe.7G079400_v2.0.a1
pyrus_communis	pycom12g04850 pycom14g04530
rosa_chinensis	RchiOBHm_Chr3g0479331
rosa_laevigata	RLG00000023584
rosa_multiflora	Rmu_co8488735.1_g000001 Rmu_sc0006763.1_g000008 Rmu_sc0006763.1_g000009
rosa_roxburghii	Rroxscaffold_6G00402410
rosa_rugosa	Rorug03G0174400 Rorug03G0174500
rosa_samantha	Rh3AG225400 Rh3BG258200 Rh3CG254000 Rh3DG249800
rosa_wichuraiana	Rw3G020160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1441
AccB1I	GGYRCC	5 cut(s)	604, 610, 616, 622, 1779
AccI	GTMKAC	1 cut(s)	916
AccII	CGCG	1 cut(s)	1355
AciI	CCGC	5 cut(s)	377, 582, 602, 1353, 1601
AclWI	GGATC	2 cut(s)	247, 1249
AcoI	YGGCCR	2 cut(s)	627, 1696
AcsI	RAATTY	4 cut(s)	403, 535, 938, 1534
AfaI	GTAC	1 cut(s)	1617
AfeI	AGCGCT	1 cut(s)	1016
AfiI	CCNNNNNNNGG	6 cut(s)	38, 176, 659, 976, 1359, 1686
AgsI	TTSAA	9 cut(s)	160, 486, 733, 898, 943, 1165, 1321, 1405, 1633
AjnI	CCWGG	4 cut(s)	474, 865, 1761, 1786
AjuI	GAANNNNNNNTTGG	2 cut(s)	303, 335
AleI	CACNNNNGTG	1 cut(s)	362
AluBI	AGCT	4 cut(s)	1145, 1430, 1758, 1828
AluI	AGCT	4 cut(s)	1145, 1430, 1758, 1828
Alw21I	GWGCWC	2 cut(s)	184, 1830
Alw26I	GTCTC	2 cut(s)	1553, 1574
AlwI	GGATC	2 cut(s)	247, 1249
AlwNI	CAGNNNCTG	1 cut(s)	1867
Aor51HI	AGCGCT	1 cut(s)	1016
AoxI	GGCC	5 cut(s)	153, 546, 627, 1592, 1696
ApeKI	GCWGC	3 cut(s)	213, 949, 1770
ApoI	RAATTY	4 cut(s)	403, 535, 938, 1534
Asp700I	GAANNNNTTC	1 cut(s)	1257
AspLEI	GCGC	1 cut(s)	1017
AspS9I	GGNCC	1 cut(s)	1443
AsuHPI	GGTGA	5 cut(s)	639, 781, 1043, 1409, 1645
AvaII	GGWCC	1 cut(s)	1443
AxyI	CCTNAGG	1 cut(s)	954
BalI	TGGCCA	1 cut(s)	1698
BanI	GGYRCC	5 cut(s)	604, 610, 616, 622, 1779
BanII	GRGCYC	2 cut(s)	431, 1830
BauI	CACGAG	1 cut(s)	640
BbsI	GAAGAC	1 cut(s)	130
Bbv12I	GWGCWC	2 cut(s)	184, 1830
BbvCI	CCTCAGC	1 cut(s)	6
BbvI	GCAGC	3 cut(s)	225, 961, 1782
BccI	CCATC	9 cut(s)	41, 86, 349, 460, 974, 1232, 1443, 1688, 1711
BciT130I	CCWGG	4 cut(s)	476, 867, 1763, 1788
BclI	TGATCA	1 cut(s)	792
BcoDI	GTCTC	2 cut(s)	1553, 1574
BfaI	CTAG	4 cut(s)	345, 351, 1461, 1832
BfmI	CTRYAG	2 cut(s)	1171, 1768
BfoI	RGCGCY	1 cut(s)	1018
BglII	AGATCT	1 cut(s)	347
BisI	GCNGC	4 cut(s)	214, 582, 950, 1771
BlsI	GCNGC	4 cut(s)	215, 583, 951, 1772
Bme1390I	CCNGG	4 cut(s)	476, 867, 1763, 1788
Bme18I	GGWCC	1 cut(s)	1443
BmgT120I	GGNCC	1 cut(s)	1443
BmiI	GGNNCC	6 cut(s)	606, 612, 618, 624, 664, 1781
BmrFI	CCNGG	4 cut(s)	476, 867, 1763, 1788
BmsI	GCATC	5 cut(s)	1291, 1447, 1599, 1789, 1867
BpiI	GAAGAC	1 cut(s)	130
BplI	GAGNNNNNCTC	4 cut(s)	373, 405, 634, 666
BpmI	CTGGAG	1 cut(s)	1433
Bpu10I	CCTNAGC	2 cut(s)	6, 466
BpuEI	CTTGAG	1 cut(s)	1640
BsaAI	YACGTR	1 cut(s)	1440
BsaBI	GATNNNNATC	1 cut(s)	963
BsaJI	CCNNGG	5 cut(s)	185, 474, 866, 971, 1117
BsaWI	WCCGGW	3 cut(s)	595, 1538, 1713
Bsc4I	CCNNNNNNNGG	6 cut(s)	38, 176, 659, 976, 1359, 1686
Bse118I	RCCGGY	4 cut(s)	607, 613, 619, 625
Bse1I	ACTGG	4 cut(s)	666, 759, 1330, 1337
Bse21I	CCTNAGG	1 cut(s)	954
Bse3DI	GCAATG	2 cut(s)	751, 1553
Bse8I	GATNNNNATC	1 cut(s)	963
BseBI	CCWGG	4 cut(s)	476, 867, 1763, 1788
BseDI	CCNNGG	5 cut(s)	185, 474, 866, 971, 1117
BseGI	GGATG	6 cut(s)	730, 790, 847, 985, 1283, 1699
BseJI	GATNNNNATC	1 cut(s)	963
BseLI	CCNNNNNNNGG	6 cut(s)	38, 176, 659, 976, 1359, 1686
BseMI	GCAATG	2 cut(s)	751, 1553
BseMII	CTCAG	6 cut(s)	69, 257, 404, 536, 687, 1098
BseNI	ACTGG	4 cut(s)	666, 759, 1330, 1337
BseRI	GAGGAG	1 cut(s)	286
BseXI	GCAGC	3 cut(s)	225, 961, 1782
BseYI	CCCAGC	1 cut(s)	1732
BsgI	GTGCAG	1 cut(s)	1826
Bsh1236I	CGCG	1 cut(s)	1355
BshFI	GGCC	5 cut(s)	155, 548, 629, 1594, 1698
BshNI	GGYRCC	5 cut(s)	604, 610, 616, 622, 1779
BsiHKAI	GWGCWC	2 cut(s)	184, 1830
BsiSI	CCGG	8 cut(s)	596, 608, 614, 620, 626, 1229, 1539, 1714
BslI	CCNNNNNNNGG	6 cut(s)	38, 176, 659, 976, 1359, 1686
BsmAI	GTCTC	2 cut(s)	1553, 1574
BsnI	GGCC	5 cut(s)	155, 548, 629, 1594, 1698
Bsp1286I	GDGCHC	3 cut(s)	184, 431, 1830
Bsp143I	GATC	6 cut(s)	51, 239, 347, 792, 1241, 1280
Bsp19I	CCATGG	1 cut(s)	1117
BspACI	CCGC	5 cut(s)	377, 582, 602, 1353, 1601
BspANI	GGCC	5 cut(s)	155, 548, 629, 1594, 1698
BspCNI	CTCAG	6 cut(s)	68, 256, 403, 535, 688, 1097
BspFNI	CGCG	1 cut(s)	1355
BspLI	GGNNCC	6 cut(s)	606, 612, 618, 624, 664, 1781
BspMAI	CTGCAG	1 cut(s)	1772
BspPI	GGATC	2 cut(s)	247, 1249
BspQI	GCTCTTC	1 cut(s)	59
BspT107I	GGYRCC	5 cut(s)	604, 610, 616, 622, 1779
BsrDI	GCAATG	2 cut(s)	751, 1553
BsrFI	RCCGGY	4 cut(s)	607, 613, 619, 625
BsrI	ACTGG	4 cut(s)	666, 759, 1330, 1337
BssAI	RCCGGY	4 cut(s)	607, 613, 619, 625
BssECI	CCNNGG	5 cut(s)	185, 474, 866, 971, 1117
BssMI	GATC	6 cut(s)	51, 239, 347, 792, 1241, 1280
BssSI	CACGAG	1 cut(s)	640
BssT1I	CCWWGG	3 cut(s)	185, 971, 1117
Bst2BI	CACGAG	1 cut(s)	640
Bst2UI	CCWGG	4 cut(s)	476, 867, 1763, 1788
Bst4CI	ACNGT	8 cut(s)	100, 145, 306, 364, 482, 553, 1183, 1556
Bst6I	CTCTTC	5 cut(s)	59, 77, 256, 268, 1877
BstBAI	YACGTR	1 cut(s)	1440
BstC8I	GCNNGC	1 cut(s)	627
BstDSI	CCRYGG	1 cut(s)	1117
BstF5I	GGATG	6 cut(s)	730, 790, 847, 985, 1283, 1699
BstFNI	CGCG	1 cut(s)	1355
BstH2I	RGCGCY	1 cut(s)	1018
BstHHI	GCGC	1 cut(s)	1017
BstKTI	GATC	6 cut(s)	54, 242, 350, 795, 1244, 1283
BstMAI	GTCTC	2 cut(s)	1553, 1574
BstMBI	GATC	6 cut(s)	51, 239, 347, 792, 1241, 1280
BstMWI	GCNNNNNNNGC	5 cut(s)	213, 467, 1600, 1609, 1779
BstNI	CCWGG	4 cut(s)	476, 867, 1763, 1788
BstSCI	CCNGG	4 cut(s)	474, 865, 1761, 1786
BstSFI	CTRYAG	2 cut(s)	1171, 1768
BstUI	CGCG	1 cut(s)	1355
BstV1I	GCAGC	3 cut(s)	225, 961, 1782
BstV2I	GAAGAC	1 cut(s)	130
BstX2I	RGATCY	2 cut(s)	239, 347
BstXI	CCANNNNNNTGG	4 cut(s)	1136, 1394, 1520, 1803
BstYI	RGATCY	2 cut(s)	239, 347
Bsu36I	CCTNAGG	1 cut(s)	954
BsuRI	GGCC	5 cut(s)	155, 548, 629, 1594, 1698
BtgI	CCRYGG	1 cut(s)	1117
BtsCI	GGATG	6 cut(s)	730, 790, 847, 985, 1283, 1699
BtsI	GCAGTG	1 cut(s)	216
Cac8I	GCNNGC	1 cut(s)	627
CaiI	CAGNNNCTG	1 cut(s)	1867
CfoI	GCGC	1 cut(s)	1017
Cfr10I	RCCGGY	4 cut(s)	607, 613, 619, 625
Cfr13I	GGNCC	1 cut(s)	1443
Csp6I	GTAC	1 cut(s)	1616
CspCI	CAANNNNNGTGG	2 cut(s)	405, 440
CviAII	CATG	7 cut(s)	61, 121, 1118, 1343, 1388, 1639, 1803
CviQI	GTAC	1 cut(s)	1616
DpnI	GATC	6 cut(s)	53, 241, 349, 794, 1243, 1282
DpnII	GATC	6 cut(s)	51, 239, 347, 792, 1241, 1280
DrdI	GACNNNNNNGTC	1 cut(s)	1441
DseDI	GACNNNNNNGTC	1 cut(s)	1441
EaeI	YGGCCR	2 cut(s)	627, 1696
Eam1104I	CTCTTC	5 cut(s)	59, 77, 256, 268, 1877
EarI	CTCTTC	5 cut(s)	59, 77, 256, 268, 1877
Ecl136II	GAGCTC	1 cut(s)	1828
Eco130I	CCWWGG	3 cut(s)	185, 971, 1117
Eco24I	GRGCYC	2 cut(s)	431, 1830
Eco47I	GGWCC	1 cut(s)	1443
Eco47III	AGCGCT	1 cut(s)	1016
Eco53kI	GAGCTC	1 cut(s)	1828
Eco81I	CCTNAGG	1 cut(s)	954
EcoICRI	GAGCTC	1 cut(s)	1828
EcoRI	GAATTC	2 cut(s)	403, 1534
EcoRII	CCWGG	4 cut(s)	474, 865, 1761, 1786
EcoT14I	CCWWGG	3 cut(s)	185, 971, 1117
EcoT22I	ATGCAT	1 cut(s)	1804
EcoT38I	GRGCYC	2 cut(s)	431, 1830
ErhI	CCWWGG	3 cut(s)	185, 971, 1117
FaeI	CATG	7 cut(s)	64, 124, 1121, 1346, 1391, 1642, 1806
FalI	AAGNNNNNCTT	4 cut(s)	56, 88, 1242, 1274
FatI	CATG	7 cut(s)	60, 120, 1117, 1342, 1387, 1638, 1802
FauI	CCCGC	1 cut(s)	1608
FauNDI	CATATG	1 cut(s)	990
FbaI	TGATCA	1 cut(s)	792
FblI	GTMKAC	1 cut(s)	916
Fnu4HI	GCNGC	4 cut(s)	214, 582, 950, 1771
FokI	GGATG	6 cut(s)	737, 797, 854, 992, 1270, 1706
FriOI	GRGCYC	2 cut(s)	431, 1830
Fsp4HI	GCNGC	4 cut(s)	214, 582, 950, 1771
FspBI	CTAG	4 cut(s)	345, 351, 1461, 1832
GlaI	GCGC	1 cut(s)	1016
GluI	GCNGC	4 cut(s)	214, 582, 950, 1771
GsaI	CCCAGC	1 cut(s)	1736
GsuI	CTGGAG	1 cut(s)	1433
HaeII	RGCGCY	1 cut(s)	1018
HaeIII	GGCC	5 cut(s)	155, 548, 629, 1594, 1698
HapII	CCGG	8 cut(s)	596, 608, 614, 620, 626, 1229, 1539, 1714
HhaI	GCGC	1 cut(s)	1017
Hin1II	CATG	7 cut(s)	64, 124, 1121, 1346, 1391, 1642, 1806
Hin6I	GCGC	1 cut(s)	1015
HinP1I	GCGC	1 cut(s)	1015
HincII	GTYRAC	1 cut(s)	1468
HindII	GTYRAC	1 cut(s)	1468
HindIII	AAGCTT	3 cut(s)	1143, 1428, 1756
HinfI	GANTC	6 cut(s)	446, 845, 1034, 1058, 1561, 1852
HpaII	CCGG	8 cut(s)	596, 608, 614, 620, 626, 1229, 1539, 1714
HphI	GGTGA	5 cut(s)	639, 781, 1043, 1409, 1645
Hpy166II	GTNNAC	6 cut(s)	192, 647, 917, 1338, 1468, 1526
Hpy188III	TCNNGA	6 cut(s)	345, 1214, 1265, 1412, 1446, 1796
Hpy8I	GTNNAC	6 cut(s)	192, 647, 917, 1338, 1468, 1526
HpyCH4III	ACNGT	8 cut(s)	100, 145, 306, 364, 482, 553, 1183, 1556
HpyCH4IV	ACGT	1 cut(s)	1439
HpyCH4V	TGCA	9 cut(s)	963, 1071, 1179, 1304, 1770, 1802, 1843, 1858, 1870
HpyF10VI	GCNNNNNNNGC	5 cut(s)	213, 467, 1600, 1609, 1779
HpySE526I	ACGT	1 cut(s)	1439
Hsp92II	CATG	7 cut(s)	64, 124, 1121, 1346, 1391, 1642, 1806
HspAI	GCGC	1 cut(s)	1015
KroI	GCCGGC	1 cut(s)	625
KroNI	GCCGGC	1 cut(s)	627
Ksp22I	TGATCA	1 cut(s)	792
Kzo9I	GATC	6 cut(s)	51, 239, 347, 792, 1241, 1280
LguI	GCTCTTC	1 cut(s)	59
LmnI	GCTCC	2 cut(s)	187, 1833
Lsp1109I	GCAGC	3 cut(s)	225, 961, 1782
LweI	GCATC	5 cut(s)	1291, 1447, 1599, 1789, 1867
MaeI	CTAG	4 cut(s)	345, 351, 1461, 1832
MaeII	ACGT	1 cut(s)	1439
MaeIII	GTNAC	3 cut(s)	353, 706, 1550
MalI	GATC	6 cut(s)	53, 241, 349, 794, 1243, 1282
MboI	GATC	6 cut(s)	51, 239, 347, 792, 1241, 1280
MfeI	CAATTG	2 cut(s)	576, 898
MflI	RGATCY	2 cut(s)	239, 347
MhlI	GDGCHC	3 cut(s)	184, 431, 1830
MlsI	TGGCCA	1 cut(s)	1698
MluCI	AATT	9 cut(s)	403, 535, 576, 591, 715, 898, 938, 1400, 1534
MluNI	TGGCCA	1 cut(s)	1698
MlyI	GAGTC	1 cut(s)	1555
MmeI	TCCRAC	1 cut(s)	957
Mox20I	TGGCCA	1 cut(s)	1698
Mph1103I	ATGCAT	1 cut(s)	1804
MroNI	GCCGGC	1 cut(s)	625
MroXI	GAANNNNTTC	1 cut(s)	1257
MscI	TGGCCA	1 cut(s)	1698
MseI	TTAA	3 cut(s)	1076, 1575, 1589
MslI	CAYNNNNRTG	4 cut(s)	362, 1134, 1392, 1518
Msp20I	TGGCCA	1 cut(s)	1698
MspI	CCGG	8 cut(s)	596, 608, 614, 620, 626, 1229, 1539, 1714
MspR9I	CCNGG	4 cut(s)	476, 867, 1763, 1788
MunI	CAATTG	2 cut(s)	576, 898
MvaI	CCWGG	4 cut(s)	476, 867, 1763, 1788
MvnI	CGCG	1 cut(s)	1355
MwoI	GCNNNNNNNGC	5 cut(s)	213, 467, 1600, 1609, 1779
NaeI	GCCGGC	1 cut(s)	627
NcoI	CCATGG	1 cut(s)	1117
NdeI	CATATG	1 cut(s)	990
NdeII	GATC	6 cut(s)	51, 239, 347, 792, 1241, 1280
NgoMIV	GCCGGC	1 cut(s)	625
NlaIII	CATG	7 cut(s)	64, 124, 1121, 1346, 1391, 1642, 1806
NlaIV	GGNNCC	6 cut(s)	606, 612, 618, 624, 664, 1781
NmeAIII	GCCGAG	2 cut(s)	405, 1849
NmuCI	GTSAC	2 cut(s)	706, 1550
NsiI	ATGCAT	1 cut(s)	1804
OliI	CACNNNNGTG	1 cut(s)	362
PciSI	GCTCTTC	1 cut(s)	59
PdiI	GCCGGC	1 cut(s)	627
PdmI	GAANNNNTTC	1 cut(s)	1257
PfeI	GAWTC	5 cut(s)	446, 845, 1034, 1058, 1852
PfoI	TCCNGGA	1 cut(s)	1761
PkrI	GCNGC	4 cut(s)	215, 583, 951, 1772
PleI	GAGTC	1 cut(s)	1555
PpsI	GAGTC	1 cut(s)	1555
Ppu21I	YACGTR	1 cut(s)	1440
Psp124BI	GAGCTC	1 cut(s)	1830
Psp6I	CCWGG	4 cut(s)	474, 865, 1761, 1786
PspFI	CCCAGC	1 cut(s)	1732
PspGI	CCWGG	4 cut(s)	474, 865, 1761, 1786
PspN4I	GGNNCC	6 cut(s)	606, 612, 618, 624, 664, 1781
PspPI	GGNCC	1 cut(s)	1443
PstI	CTGCAG	1 cut(s)	1772
PstNI	CAGNNNCTG	1 cut(s)	1867
PsuI	RGATCY	2 cut(s)	239, 347
RsaI	GTAC	1 cut(s)	1617
RsaNI	GTAC	1 cut(s)	1616
RseI	CAYNNNNRTG	4 cut(s)	362, 1134, 1392, 1518
SacI	GAGCTC	1 cut(s)	1830
SapI	GCTCTTC	1 cut(s)	59
SaqAI	TTAA	3 cut(s)	1076, 1575, 1589
SatI	GCNGC	4 cut(s)	214, 582, 950, 1771
Sau3AI	GATC	6 cut(s)	51, 239, 347, 792, 1241, 1280
Sau96I	GGNCC	1 cut(s)	1443
SchI	GAGTC	1 cut(s)	1555
ScrFI	CCNGG	4 cut(s)	476, 867, 1763, 1788
SduI	GDGCHC	3 cut(s)	184, 431, 1830
SfaNI	GCATC	5 cut(s)	1291, 1447, 1599, 1789, 1867
SfcI	CTRYAG	2 cut(s)	1171, 1768
SinI	GGWCC	1 cut(s)	1443
SmiMI	CAYNNNNRTG	4 cut(s)	362, 1134, 1392, 1518
SmlI	CTYRAG	1 cut(s)	1619
SmoI	CTYRAG	1 cut(s)	1619
Sse9I	AATT	9 cut(s)	403, 535, 576, 591, 715, 898, 938, 1400, 1534
SsiI	CCGC	5 cut(s)	377, 582, 602, 1353, 1601
SspMI	CTAG	4 cut(s)	345, 351, 1461, 1832
SstI	GAGCTC	1 cut(s)	1830
StyD4I	CCNGG	4 cut(s)	474, 865, 1761, 1786
StyI	CCWWGG	3 cut(s)	185, 971, 1117
TaaI	ACNGT	8 cut(s)	100, 145, 306, 364, 482, 553, 1183, 1556
TaiI	ACGT	1 cut(s)	1442
TaqI	TCGA	4 cut(s)	713, 837, 1213, 1244
TaqII	GACCGA	1 cut(s)	1694
TasI	AATT	9 cut(s)	403, 535, 576, 591, 715, 898, 938, 1400, 1534
TauI	GCSGC	1 cut(s)	584
TfiI	GAWTC	5 cut(s)	446, 845, 1034, 1058, 1852
Tru1I	TTAA	3 cut(s)	1076, 1575, 1589
Tru9I	TTAA	3 cut(s)	1076, 1575, 1589
TseFI	GTSAC	2 cut(s)	706, 1550
TseI	GCWGC	3 cut(s)	213, 949, 1770
Tsp45I	GTSAC	2 cut(s)	706, 1550
TspDTI	ATGAA	9 cut(s)	77, 109, 762, 837, 1125, 1137, 1147, 1655, 1824
TspGWI	ACGGA	1 cut(s)	737
VpaK11BI	GGWCC	1 cut(s)	1443
XapI	RAATTY	4 cut(s)	403, 535, 938, 1534
XbaI	TCTAGA	1 cut(s)	344
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1520
XmiI	GTMKAC	1 cut(s)	916
XmnI	GAANNNNTTC	1 cut(s)	1257
XspI	CTAG	4 cut(s)	345, 351, 1461, 1832
Zsp2I	ATGCAT	1 cut(s)	1804

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.