Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0013834

Physical Location & Seq

Genomic Coordinates Forward (+)

16478623 .. 16481816

Gene Structure 3194 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0188900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGGAGGTTCAGACCCAGAGCCTCTCGGGTTTCGACCATCTCCAGTCGAAGCCATTCTCCTACTCCCCCAACGGCGTCCTCGATTCCCGCGACTTTCCCAGCTCCGAAATGTCTCCCAAATGCGAGGCCGCGAGTCCCAAGGCGAGTGAGGTGGACGCCAAAGCGGCGGTGAAGCTGCAGAAGGTGTACAGGAGTTACCGGACCCGGCGCAGGTTGGCTGACTCCGCCGTCGTGGCTGAAGAGCTCTGGTGGCAAGCGATAGACTATGCGAGACTGAATCACAGTACCATTTCTTTCTTTAATTTCTTGAAGCCCGAATCTGCGGCTTCACGCTGGAAACGTTATAGCTTGAATGCTTCTAAGGTGGGCAAGGGACTGTCTAAAGACGCCAAAGCTCAGAAACTGGCTTTTCAGCACTGGATTGAAGCGATTGATCCAAGGCACAGGTATGGGCATAGCTTGCATGTGTATTATGAAGAATGGTGTAAAGCAGACGCTGGTCAGCCATTTTTTTACTGGTTGGATATAGGAGATGGCAAAGAGCTTGATCTCAAGAAGTGCCCAAGATCAGAGCTTCGACAGCAATGCATTAGATATCTTGGACCTCACGAGAGAATACATTACGAGTATGTTGTTGCTGATGGGCAAATTATTCACTCACAAACTGGAGAGCTACTTGATACAAATGAGGGATCGAAAGCTAAGTGGATCTTTGTTATGAGCACCACTAAGAAACTCTATGCTGGTGAAAAAAAGAAAGGAGTTTTCCATCATTCTAGCTTCTTGGCTGGAGGAGCAACAATAGCTGCCGGAAGGCTAGCAGCAACGCATGGAATTCTGAAGTCCATTTCTGCGTATAGTGGACACTATCGACCAACTGATGACCGTCTTGATAGCTTCTTATCCTTTCTCAAGGAAAATGGTGTGAACCTTGATGAAGTTGAGATACGCAAGGCAAATGAAGATTCAGATAAGTATGATGATGGCAAGTCTATTAAAAGGGGGACTACATTTGAATTTCCAACCAACTCTGAAGCTCCTAGTGAACCTGCGATACCAGAAGAAGTTGAGAAAACCGAAGTCTTAGAATCCACTGAAGTCCCCAAGACAGACACCAAAACTAATTACCAAAGGACTTTATCTGGCGGTCTTCAGAGTCCAAGAGCTGAAGTGCCTCAGAACAAGATACTGCAGAGGATCAACTCCAAGAAGCAAGCCAAATCATACCAACTTGGGCATCAACTCTCCCTCAAGTGGTCAACGGGAGCTGGACCAAGAATTGGTTGTGTTGCTGATTATCCAGTAGAACTGAGAACGCAGGCCTTGGAGTTCGTCAATCTATCTCCAAGATCACCCCAAACACCATCCTATAGGAGGTTTGCTGGTCTTGCTTCACCTACATCTGGTCTCGCATCACCTACATCTGGTCTCGCATCACCTACATCTAGTCCCGCACCGCCTACATCCATTTCCACCTCAGATATCAACCATGGTGATTTGACCTCTGGTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001709 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009653 GO:0009791 GO:0009812 GO:0009813 GO:0009826 GO:0009856 GO:0009860 GO:0009889 GO:0009908 GO:0009932 GO:0009987 GO:0010154 GO:0010468 GO:0010500 GO:0010556 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0044706 GO:0045165 GO:0048367 GO:0048438 GO:0048467 GO:0048468 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051704 GO:0060255 GO:0060560 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090567 GO:0140110 GO:1901576 GO:1903506 GO:1990058 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2

Protein Analysis

504

Amino Acids

56.03

Weight (kDa)

8.76

Isoelectric Point (pI)

50.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013834)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57670
fragaria_vesca	FvH4_6g23170
malus_domestica	MD12G1066400.v1.1 MD14G1066100.v1.1
prunus_persica	Prupe.7G067900_v2.0.a1
pyrus_communis	pycom12g05780 pycom14g05390
rosa_chinensis	RchiOBHm_Chr3g0481001
rosa_laevigata	RLG00000023434
rosa_multiflora	Rmu_sc0002927.1_g000032
rosa_roxburghii	Rroxscaffold_6G00400760
rosa_rugosa	Rorug03G0188900
rosa_samantha	Rh3AG239600 Rh3BG274600 Rh3CG270100 Rh3DG266200
rosa_wichuraiana	Rw0G018680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	227
Acc36I	ACCTGC	2 cut(s)	201, 1057
AccB7I	CCANNNNNTGG	1 cut(s)	1280
AccII	CGCG	2 cut(s)	90, 131
AciI	CCGC	9 cut(s)	88, 129, 164, 167, 225, 323, 1146, 1452, 1457
AclI	AACGTT	1 cut(s)	340
AclWI	GGATC	4 cut(s)	428, 700, 716, 1205
AcsI	RAATTY	2 cut(s)	834, 1016
AcuI	CTGAAG	6 cut(s)	258, 860, 1053, 1116, 1136, 1188
AcyI	GRCGYC	3 cut(s)	75, 156, 387
AfaI	GTAC	2 cut(s)	188, 286
AfiI	CCNNNNNNNGG	6 cut(s)	210, 1254, 1280, 1374, 1403, 1424
AgsI	TTSAA	4 cut(s)	310, 352, 425, 1016
Alw21I	GWGCWC	2 cut(s)	246, 725
Alw26I	GTCTC	4 cut(s)	117, 265, 1412, 1433
AlwI	GGATC	4 cut(s)	428, 700, 716, 1205
AlwNI	CAGNNNCTG	2 cut(s)	403, 497
Ama87I	CYCGRG	1 cut(s)	25
AoxI	GGCC	2 cut(s)	126, 1320
ApeKI	GCWGC	3 cut(s)	175, 806, 821
ApoI	RAATTY	2 cut(s)	834, 1016
Asp700I	GAANNNNTTC	1 cut(s)	53
AspLEI	GCGC	1 cut(s)	210
AspS9I	GGNCC	3 cut(s)	201, 602, 1271
AsuC2I	CCSGG	1 cut(s)	205
AsuHPI	GGTGA	7 cut(s)	181, 758, 1344, 1386, 1407, 1428, 1505
AsuNHI	GCTAGC	1 cut(s)	817
AvaI	CYCGRG	1 cut(s)	25
AvaII	GGWCC	3 cut(s)	201, 602, 1271
BaeGI	GKGCMC	1 cut(s)	563
BanII	GRGCYC	1 cut(s)	246
BarI	GAAGNNNNNNTAC	2 cut(s)	930, 962
BauI	CACGAG	1 cut(s)	608
BbsI	GAAGAC	1 cut(s)	1142
Bbv12I	GWGCWC	2 cut(s)	246, 725
BbvI	GCAGC	3 cut(s)	162, 793, 833
BccI	CCATC	6 cut(s)	45, 527, 635, 777, 977, 1372
BceAI	ACGGC	2 cut(s)	88, 212
BcgI	CGANNNNNNTGC	2 cut(s)	567, 601
BcnI	CCSGG	1 cut(s)	205
BcoDI	GTCTC	4 cut(s)	117, 265, 1412, 1433
BfaI	CTAG	4 cut(s)	777, 818, 1041, 1446
BfmI	CTRYAG	3 cut(s)	176, 1190, 1369
BfuAI	ACCTGC	2 cut(s)	201, 1057
BglI	GCCNNNNNGGC	2 cut(s)	164, 233
BisI	GCNGC	6 cut(s)	129, 165, 176, 324, 807, 822
BlsI	GCNGC	6 cut(s)	130, 166, 177, 325, 808, 823
Bme1390I	CCNGG	1 cut(s)	205
Bme18I	GGWCC	3 cut(s)	201, 602, 1271
BmeT110I	CYCGRG	1 cut(s)	25
BmgT120I	GGNCC	3 cut(s)	201, 602, 1271
BmiI	GGNNCC	1 cut(s)	203
BmrFI	CCNGG	1 cut(s)	205
BmsI	GCATC	3 cut(s)	1246, 1421, 1442
BmtI	GCTAGC	1 cut(s)	821
BoxI	GACNNNNGTC	1 cut(s)	498
BpiI	GAAGAC	1 cut(s)	1142
BpmI	CTGGAG	3 cut(s)	26, 687, 810
BpuEI	CTTGAG	3 cut(s)	536, 896, 1235
BpuMI	CCSGG	1 cut(s)	205
BsaHI	GRCGYC	3 cut(s)	75, 156, 387
BsaI	GGTCTC	2 cut(s)	1412, 1433
BsaJI	CCNNGG	4 cut(s)	138, 437, 1323, 1489
BsaWI	WCCGGW	1 cut(s)	198
Bsc4I	CCNNNNNNNGG	6 cut(s)	210, 1254, 1280, 1374, 1403, 1424
Bse1I	ACTGG	6 cut(s)	43, 408, 422, 521, 670, 1301
Bse3DI	GCAATG	1 cut(s)	590
BseDI	CCNNGG	4 cut(s)	138, 437, 1323, 1489
BseGI	GGATG	2 cut(s)	1364, 1463
BseLI	CCNNNNNNNGG	6 cut(s)	210, 1254, 1280, 1374, 1403, 1424
BseMI	GCAATG	1 cut(s)	590
BseMII	CTCAG	4 cut(s)	410, 1190, 1301, 1491
BseNI	ACTGG	6 cut(s)	43, 408, 422, 521, 670, 1301
BseRI	GAGGAG	1 cut(s)	807
BseSI	GKGCMC	1 cut(s)	563
BseXI	GCAGC	3 cut(s)	162, 793, 833
BseYI	CCCAGC	1 cut(s)	98
Bsh1236I	CGCG	2 cut(s)	90, 131
BshFI	GGCC	2 cut(s)	128, 1322
BsiHKAI	GWGCWC	2 cut(s)	246, 725
BsiHKCI	CYCGRG	1 cut(s)	25
BsiSI	CCGG	3 cut(s)	199, 205, 810
BslFI	GGGAC	5 cut(s)	120, 387, 1018, 1085, 1434
BslI	CCNNNNNNNGG	6 cut(s)	210, 1254, 1280, 1374, 1403, 1424
BsmAI	GTCTC	4 cut(s)	117, 265, 1412, 1433
BsmFI	GGGAC	5 cut(s)	120, 387, 1018, 1085, 1434
BsmI	GAATGC	1 cut(s)	358
BsnI	GGCC	2 cut(s)	128, 1322
Bso31I	GGTCTC	2 cut(s)	1412, 1433
BsoBI	CYCGRG	1 cut(s)	25
Bsp1286I	GDGCHC	3 cut(s)	246, 563, 725
Bsp1407I	TGTACA	1 cut(s)	186
Bsp143I	GATC	7 cut(s)	433, 547, 566, 692, 708, 1197, 1349
Bsp19I	CCATGG	1 cut(s)	1489
BspACI	CCGC	9 cut(s)	88, 129, 164, 167, 225, 323, 1146, 1452, 1457
BspANI	GGCC	2 cut(s)	128, 1322
BspCNI	CTCAG	4 cut(s)	409, 1189, 1302, 1490
BspFNI	CGCG	2 cut(s)	90, 131
BspLI	GGNNCC	1 cut(s)	203
BspMAI	CTGCAG	2 cut(s)	180, 1194
BspMI	ACCTGC	2 cut(s)	201, 1057
BspOI	GCTAGC	1 cut(s)	821
BspPI	GGATC	4 cut(s)	428, 700, 716, 1205
BspQI	GCTCTTC	1 cut(s)	234
BspTNI	GGTCTC	2 cut(s)	1412, 1433
BsrDI	GCAATG	1 cut(s)	590
BsrGI	TGTACA	1 cut(s)	186
BsrI	ACTGG	6 cut(s)	43, 408, 422, 521, 670, 1301
BssECI	CCNNGG	4 cut(s)	138, 437, 1323, 1489
BssMI	GATC	7 cut(s)	433, 547, 566, 692, 708, 1197, 1349
BssNI	GRCGYC	3 cut(s)	75, 156, 387
BssSI	CACGAG	1 cut(s)	608
BssT1I	CCWWGG	4 cut(s)	138, 437, 1323, 1489
Bst2BI	CACGAG	1 cut(s)	608
Bst4CI	ACNGT	3 cut(s)	284, 378, 887
Bst6I	CTCTTC	1 cut(s)	234
BstACI	GRCGYC	3 cut(s)	75, 156, 387
BstAPI	GCANNNNNTGC	1 cut(s)	460
BstAUI	TGTACA	1 cut(s)	186
BstC8I	GCNNGC	5 cut(s)	255, 461, 819, 1215, 1320
BstDEI	CTNAG	8 cut(s)	360, 396, 702, 729, 1084, 1176, 1310, 1477
BstDSI	CCRYGG	1 cut(s)	1489
BstENI	CCTNNNNNAGG	1 cut(s)	1372
BstF5I	GGATG	2 cut(s)	1364, 1463
BstFNI	CGCG	2 cut(s)	90, 131
BstHHI	GCGC	1 cut(s)	210
BstKTI	GATC	7 cut(s)	436, 550, 569, 695, 711, 1200, 1352
BstMAI	GTCTC	4 cut(s)	117, 265, 1412, 1433
BstMBI	GATC	7 cut(s)	433, 547, 566, 692, 708, 1197, 1349
BstMWI	GCNNNNNNNGC	9 cut(s)	164, 224, 233, 250, 460, 580, 794, 803, 1388
BstNSI	RCATGY	1 cut(s)	467
BstPAI	GACNNNNGTC	1 cut(s)	498
BstSCI	CCNGG	1 cut(s)	203
BstSFI	CTRYAG	3 cut(s)	176, 1190, 1369
BstSLI	GKGCMC	1 cut(s)	563
BstUI	CGCG	2 cut(s)	90, 131
BstV1I	GCAGC	3 cut(s)	162, 793, 833
BstV2I	GAAGAC	1 cut(s)	1142
BstX2I	RGATCY	1 cut(s)	708
BstYI	RGATCY	1 cut(s)	708
BsuRI	GGCC	2 cut(s)	128, 1322
BtgI	CCRYGG	1 cut(s)	1489
BtsCI	GGATG	2 cut(s)	1364, 1463
BtsIMutI	CAGTG	2 cut(s)	415, 1092
BveI	ACCTGC	2 cut(s)	201, 1057
Cac8I	GCNNGC	5 cut(s)	255, 461, 819, 1215, 1320
CaiI	CAGNNNCTG	2 cut(s)	403, 497
CfoI	GCGC	1 cut(s)	210
Cfr13I	GGNCC	3 cut(s)	201, 602, 1271
CseI	GACGC	4 cut(s)	64, 164, 395, 503
Csp6I	GTAC	2 cut(s)	187, 285
CviAII	CATG	3 cut(s)	464, 830, 1490
CviQI	GTAC	2 cut(s)	187, 285
DdeI	CTNAG	8 cut(s)	360, 396, 702, 729, 1084, 1176, 1310, 1477
DpnI	GATC	7 cut(s)	435, 549, 568, 694, 710, 1199, 1351
DpnII	GATC	7 cut(s)	433, 547, 566, 692, 708, 1197, 1349
DrdI	GACNNNNNNGTC	1 cut(s)	227
DseDI	GACNNNNNNGTC	1 cut(s)	227
Eam1104I	CTCTTC	1 cut(s)	234
EarI	CTCTTC	1 cut(s)	234
EciI	GGCGGA	1 cut(s)	214
Ecl136II	GAGCTC	1 cut(s)	244
Eco130I	CCWWGG	4 cut(s)	138, 437, 1323, 1489
Eco147I	AGGCCT	1 cut(s)	1322
Eco24I	GRGCYC	1 cut(s)	246
Eco31I	GGTCTC	2 cut(s)	1412, 1433
Eco32I	GATATC	2 cut(s)	596, 1483
Eco47I	GGWCC	3 cut(s)	201, 602, 1271
Eco53kI	GAGCTC	1 cut(s)	244
Eco57I	CTGAAG	6 cut(s)	258, 860, 1053, 1116, 1136, 1188
Eco88I	CYCGRG	1 cut(s)	25
EcoICRI	GAGCTC	1 cut(s)	244
EcoNI	CCTNNNNNAGG	1 cut(s)	1372
EcoRI	GAATTC	1 cut(s)	834
EcoRV	GATATC	2 cut(s)	596, 1483
EcoT14I	CCWWGG	4 cut(s)	138, 437, 1323, 1489
EcoT22I	ATGCAT	1 cut(s)	590
EcoT38I	GRGCYC	1 cut(s)	246
ErhI	CCWWGG	4 cut(s)	138, 437, 1323, 1489
FaeI	CATG	3 cut(s)	467, 833, 1493
FalI	AAGNNNNNCTT	2 cut(s)	695, 727
FaqI	GGGAC	5 cut(s)	120, 387, 1018, 1085, 1434
FatI	CATG	3 cut(s)	463, 829, 1489
FauI	CCCGC	2 cut(s)	95, 1459
Fnu4HI	GCNGC	6 cut(s)	129, 165, 176, 324, 807, 822
FokI	GGATG	2 cut(s)	1351, 1450
FriOI	GRGCYC	1 cut(s)	246
Fsp4HI	GCNGC	6 cut(s)	129, 165, 176, 324, 807, 822
FspBI	CTAG	4 cut(s)	777, 818, 1041, 1446
GlaI	GCGC	1 cut(s)	209
GluI	GCNGC	6 cut(s)	129, 165, 176, 324, 807, 822
GsaI	CCCAGC	1 cut(s)	102
GsuI	CTGGAG	3 cut(s)	26, 687, 810
HaeIII	GGCC	2 cut(s)	128, 1322
HapII	CCGG	3 cut(s)	199, 205, 810
HgaI	GACGC	4 cut(s)	64, 164, 395, 503
HhaI	GCGC	1 cut(s)	210
Hin1I	GRCGYC	3 cut(s)	75, 156, 387
Hin1II	CATG	3 cut(s)	467, 833, 1493
Hin6I	GCGC	1 cut(s)	208
HinP1I	GCGC	1 cut(s)	208
HincII	GTYRAC	1 cut(s)	1260
HindII	GTYRAC	1 cut(s)	1260
HinfI	GANTC	8 cut(s)	83, 133, 221, 277, 317, 965, 1088, 1156
HpaII	CCGG	3 cut(s)	199, 205, 810
HphI	GGTGA	7 cut(s)	181, 758, 1344, 1386, 1407, 1428, 1505
Hpy166II	GTNNAC	6 cut(s)	154, 187, 863, 928, 1046, 1260
Hpy188III	TCNNGA	4 cut(s)	307, 553, 608, 890
Hpy8I	GTNNAC	6 cut(s)	154, 187, 863, 928, 1046, 1260
Hpy99I	CGWCG	1 cut(s)	233
HpyAV	CCTTC	2 cut(s)	175, 807
HpyCH4III	ACNGT	3 cut(s)	284, 378, 887
HpyCH4IV	ACGT	1 cut(s)	340
HpyCH4V	TGCA	4 cut(s)	178, 463, 588, 1192
HpyF10VI	GCNNNNNNNGC	9 cut(s)	164, 224, 233, 250, 460, 580, 794, 803, 1388
HpyF3I	CTNAG	8 cut(s)	360, 396, 702, 729, 1084, 1176, 1310, 1477
HpySE526I	ACGT	1 cut(s)	340
Hsp92I	GRCGYC	3 cut(s)	75, 156, 387
Hsp92II	CATG	3 cut(s)	467, 833, 1493
HspAI	GCGC	1 cut(s)	208
Kzo9I	GATC	7 cut(s)	433, 547, 566, 692, 708, 1197, 1349
LguI	GCTCTTC	1 cut(s)	234
LmnI	GCTCC	4 cut(s)	107, 794, 1042, 1265
Lsp1109I	GCAGC	3 cut(s)	162, 793, 833
LweI	GCATC	3 cut(s)	1246, 1421, 1442
MaeI	CTAG	4 cut(s)	777, 818, 1041, 1446
MaeII	ACGT	1 cut(s)	340
MaeIII	GTNAC	1 cut(s)	194
MalI	GATC	7 cut(s)	435, 549, 568, 694, 710, 1199, 1351
MboI	GATC	7 cut(s)	433, 547, 566, 692, 708, 1197, 1349
MboII	GAAGA	5 cut(s)	251, 488, 974, 1073, 1142
MflI	RGATCY	1 cut(s)	708
MhlI	GDGCHC	3 cut(s)	246, 563, 725
MluCI	AATT	6 cut(s)	301, 648, 834, 1016, 1123, 1278
MlyI	GAGTC	3 cut(s)	142, 215, 1165
MmeI	TCCRAC	2 cut(s)	501, 1046
Mph1103I	ATGCAT	1 cut(s)	590
MroXI	GAANNNNTTC	1 cut(s)	53
MseI	TTAA	2 cut(s)	300, 996
MslI	CAYNNNNRTG	1 cut(s)	447
MspI	CCGG	3 cut(s)	199, 205, 810
MspR9I	CCNGG	1 cut(s)	205
Mva1269I	GAATGC	1 cut(s)	358
MvnI	CGCG	2 cut(s)	90, 131
MwoI	GCNNNNNNNGC	9 cut(s)	164, 224, 233, 250, 460, 580, 794, 803, 1388
NciI	CCSGG	1 cut(s)	205
NcoI	CCATGG	1 cut(s)	1489
NdeII	GATC	7 cut(s)	433, 547, 566, 692, 708, 1197, 1349
NheI	GCTAGC	1 cut(s)	817
NlaIII	CATG	3 cut(s)	467, 833, 1493
NlaIV	GGNNCC	1 cut(s)	203
NsiI	ATGCAT	1 cut(s)	590
NspI	RCATGY	1 cut(s)	467
PceI	AGGCCT	1 cut(s)	1322
PciSI	GCTCTTC	1 cut(s)	234
PcsI	WCGNNNNNNNCGW	3 cut(s)	78, 87, 337
PctI	GAATGC	1 cut(s)	358
PdmI	GAANNNNTTC	1 cut(s)	53
PfeI	GAWTC	5 cut(s)	83, 277, 317, 965, 1088
PflMI	CCANNNNNTGG	1 cut(s)	1280
PkrI	GCNGC	6 cut(s)	130, 166, 177, 325, 808, 823
PleI	GAGTC	3 cut(s)	141, 215, 1164
PpsI	GAGTC	3 cut(s)	141, 215, 1164
PshAI	GACNNNNGTC	1 cut(s)	498
Psp124BI	GAGCTC	1 cut(s)	246
Psp1406I	AACGTT	1 cut(s)	340
PspFI	CCCAGC	1 cut(s)	98
PspN4I	GGNNCC	1 cut(s)	203
PspPI	GGNCC	3 cut(s)	201, 602, 1271
PsrI	GAACNNNNNNTAC	2 cut(s)	1038, 1070
PstI	CTGCAG	2 cut(s)	180, 1194
PstNI	CAGNNNCTG	2 cut(s)	403, 497
PsuI	RGATCY	1 cut(s)	708
RsaI	GTAC	2 cut(s)	188, 286
RsaNI	GTAC	2 cut(s)	187, 285
RseI	CAYNNNNRTG	1 cut(s)	447
SacI	GAGCTC	1 cut(s)	246
SapI	GCTCTTC	1 cut(s)	234
SaqAI	TTAA	2 cut(s)	300, 996
SatI	GCNGC	6 cut(s)	129, 165, 176, 324, 807, 822
Sau3AI	GATC	7 cut(s)	433, 547, 566, 692, 708, 1197, 1349
Sau96I	GGNCC	3 cut(s)	201, 602, 1271
SchI	GAGTC	3 cut(s)	142, 215, 1165
ScrFI	CCNGG	1 cut(s)	205
SduI	GDGCHC	3 cut(s)	246, 563, 725
SfaNI	GCATC	3 cut(s)	1246, 1421, 1442
SfcI	CTRYAG	3 cut(s)	176, 1190, 1369
SinI	GGWCC	3 cut(s)	201, 602, 1271
SmiMI	CAYNNNNRTG	1 cut(s)	447
SmlI	CTYRAG	3 cut(s)	551, 911, 1250
SmoI	CTYRAG	3 cut(s)	551, 911, 1250
Sse9I	AATT	6 cut(s)	301, 648, 834, 1016, 1123, 1278
SseBI	AGGCCT	1 cut(s)	1322
SsiI	CCGC	9 cut(s)	88, 129, 164, 167, 225, 323, 1146, 1452, 1457
SspMI	CTAG	4 cut(s)	777, 818, 1041, 1446
SstI	GAGCTC	1 cut(s)	246
StuI	AGGCCT	1 cut(s)	1322
StyD4I	CCNGG	1 cut(s)	203
StyI	CCWWGG	4 cut(s)	138, 437, 1323, 1489
TaaI	ACNGT	3 cut(s)	284, 378, 887
TaiI	ACGT	1 cut(s)	343
TaqI	TCGA	6 cut(s)	33, 47, 81, 577, 695, 871
TasI	AATT	6 cut(s)	301, 648, 834, 1016, 1123, 1278
TatI	WGTACW	1 cut(s)	186
TauI	GCSGC	3 cut(s)	131, 167, 326
TfiI	GAWTC	5 cut(s)	83, 277, 317, 965, 1088
Tru1I	TTAA	2 cut(s)	300, 996
Tru9I	TTAA	2 cut(s)	300, 996
TscAI	CASTG	2 cut(s)	422, 1099
TseI	GCWGC	3 cut(s)	175, 806, 821
TspDTI	ATGAA	3 cut(s)	489, 951, 975
TspRI	CASTG	2 cut(s)	422, 1099
Van91I	CCANNNNNTGG	1 cut(s)	1280
VpaK11BI	GGWCC	3 cut(s)	201, 602, 1271
XagI	CCTNNNNNAGG	1 cut(s)	1372
XapI	RAATTY	2 cut(s)	834, 1016
XceI	RCATGY	1 cut(s)	467
XcmI	CCANNNNNNNNNTGG	1 cut(s)	513
XmnI	GAANNNNTTC	1 cut(s)	53
XspI	CTAG	4 cut(s)	777, 818, 1041, 1446
Zsp2I	ATGCAT	1 cut(s)	590

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.