Autophagy-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G15580 |
| fragaria_vesca | FvH4_1g26480 |
| malus_domestica | MD09G1293100.v1.1 |
| prunus_persica | Prupe.3G004300_v2.0.a1 |
| pyrus_communis | pycom09g19600 |
| rosa_chinensis | RchiOBHm_Chr3g0486541 |
| rosa_laevigata | RLG00000023078 |
| rosa_multiflora | Rmu_sc0003801.1_g000027 Rmu_sc0011408.1_g000005 |
| rosa_roxburghii | Rroxscaffold_6G00395810 |
| rosa_rugosa | Rorug03G0225000 |
| rosa_samantha | Rh3AG275000 Rh3CG309300 Rh3DG306100 |
| rosa_wichuraiana | Rw3G024510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 43 |
| Acc36I | ACCTGC | 1 cut(s) | 43 |
| AccI | GTMKAC | 1 cut(s) | 54 |
| AciI | CCGC | 1 cut(s) | 282 |
| AcsI | RAATTY | 2 cut(s) | 130, 245 |
| AcyI | GRCGYC | 1 cut(s) | 60 |
| AgsI | TTSAA | 2 cut(s) | 245, 256 |
| AluBI | AGCT | 4 cut(s) | 22, 157, 198, 206 |
| AluI | AGCT | 4 cut(s) | 22, 157, 198, 206 |
| Alw21I | GWGCWC | 1 cut(s) | 159 |
| ApoI | RAATTY | 2 cut(s) | 130, 245 |
| AspLEI | GCGC | 1 cut(s) | 40 |
| AsuHPI | GGTGA | 3 cut(s) | 24, 34, 176 |
| BanII | GRGCYC | 1 cut(s) | 159 |
| BauI | CACGAG | 1 cut(s) | 5 |
| BbsI | GAAGAC | 1 cut(s) | 117 |
| Bbv12I | GWGCWC | 1 cut(s) | 159 |
| BccI | CCATC | 1 cut(s) | 92 |
| BceAI | ACGGC | 1 cut(s) | 47 |
| BfaI | CTAG | 1 cut(s) | 23 |
| BfuAI | ACCTGC | 1 cut(s) | 43 |
| BisI | GCNGC | 1 cut(s) | 283 |
| BlsI | GCNGC | 1 cut(s) | 284 |
| BmsI | GCATC | 1 cut(s) | 157 |
| BpiI | GAAGAC | 1 cut(s) | 117 |
| BpuEI | CTTGAG | 2 cut(s) | 101, 173 |
| Bsa29I | ATCGAT | 1 cut(s) | 87 |
| BsaBI | GATNNNNATC | 1 cut(s) | 93 |
| BsaHI | GRCGYC | 1 cut(s) | 60 |
| Bse8I | GATNNNNATC | 1 cut(s) | 93 |
| BseCI | ATCGAT | 1 cut(s) | 87 |
| BseJI | GATNNNNATC | 1 cut(s) | 93 |
| BsgI | GTGCAG | 1 cut(s) | 252 |
| BshVI | ATCGAT | 1 cut(s) | 87 |
| BsiHKAI | GWGCWC | 1 cut(s) | 159 |
| Bsp1286I | GDGCHC | 1 cut(s) | 159 |
| Bsp143I | GATC | 1 cut(s) | 72 |
| BspACI | CCGC | 1 cut(s) | 282 |
| BspDI | ATCGAT | 1 cut(s) | 87 |
| BspMI | ACCTGC | 1 cut(s) | 43 |
| BssMI | GATC | 1 cut(s) | 72 |
| BssNI | GRCGYC | 1 cut(s) | 60 |
| BssSI | CACGAG | 1 cut(s) | 5 |
| Bst2BI | CACGAG | 1 cut(s) | 5 |
| Bst4CI | ACNGT | 1 cut(s) | 127 |
| BstACI | GRCGYC | 1 cut(s) | 60 |
| BstHHI | GCGC | 1 cut(s) | 40 |
| BstKTI | GATC | 1 cut(s) | 75 |
| BstMBI | GATC | 1 cut(s) | 72 |
| BstV2I | GAAGAC | 1 cut(s) | 117 |
| Bsu15I | ATCGAT | 1 cut(s) | 87 |
| BsuTUI | ATCGAT | 1 cut(s) | 87 |
| BveI | ACCTGC | 1 cut(s) | 43 |
| CfoI | GCGC | 1 cut(s) | 40 |
| ClaI | ATCGAT | 1 cut(s) | 87 |
| CseI | GACGC | 1 cut(s) | 68 |
| CviJI | RGCY | 7 cut(s) | 22, 83, 143, 157, 198, 206, 262 |
| CviKI_1 | RGCY | 7 cut(s) | 22, 83, 143, 157, 198, 206, 262 |
| DpnI | GATC | 1 cut(s) | 74 |
| DpnII | GATC | 1 cut(s) | 72 |
| Ecl136II | GAGCTC | 1 cut(s) | 157 |
| Eco24I | GRGCYC | 1 cut(s) | 159 |
| Eco53kI | GAGCTC | 1 cut(s) | 157 |
| EcoICRI | GAGCTC | 1 cut(s) | 157 |
| EcoRI | GAATTC | 1 cut(s) | 245 |
| EcoT38I | GRGCYC | 1 cut(s) | 159 |
| FaiI | YATR | 5 cut(s) | 92, 99, 101, 291, 310 |
| FblI | GTMKAC | 1 cut(s) | 54 |
| Fnu4HI | GCNGC | 1 cut(s) | 283 |
| FriOI | GRGCYC | 1 cut(s) | 159 |
| Fsp4HI | GCNGC | 1 cut(s) | 283 |
| FspBI | CTAG | 1 cut(s) | 23 |
| GlaI | GCGC | 1 cut(s) | 39 |
| GluI | GCNGC | 1 cut(s) | 283 |
| HgaI | GACGC | 1 cut(s) | 68 |
| HhaI | GCGC | 1 cut(s) | 40 |
| Hin1I | GRCGYC | 1 cut(s) | 60 |
| Hin6I | GCGC | 1 cut(s) | 38 |
| HinP1I | GCGC | 1 cut(s) | 38 |
| HinfI | GANTC | 1 cut(s) | 213 |
| HphI | GGTGA | 3 cut(s) | 24, 34, 176 |
| Hpy166II | GTNNAC | 2 cut(s) | 55, 123 |
| Hpy188III | TCNNGA | 3 cut(s) | 7, 107, 256 |
| Hpy8I | GTNNAC | 2 cut(s) | 55, 123 |
| Hpy99I | CGWCG | 2 cut(s) | 62, 73 |
| HpyCH4III | ACNGT | 1 cut(s) | 127 |
| HpyCH4V | TGCA | 1 cut(s) | 233 |
| Hsp92I | GRCGYC | 1 cut(s) | 60 |
| HspAI | GCGC | 1 cut(s) | 38 |
| Kzo9I | GATC | 1 cut(s) | 72 |
| LpnPI | CCDG | 5 cut(s) | 32, 48, 120, 174, 194 |
| LweI | GCATC | 1 cut(s) | 157 |
| MaeI | CTAG | 1 cut(s) | 23 |
| MaeIII | GTNAC | 1 cut(s) | 191 |
| MalI | GATC | 1 cut(s) | 74 |
| MboI | GATC | 1 cut(s) | 72 |
| MboII | GAAGA | 1 cut(s) | 122 |
| MhlI | GDGCHC | 1 cut(s) | 159 |
| MluCI | AATT | 4 cut(s) | 102, 130, 245, 276 |
| MnlI | CCTC | 1 cut(s) | 125 |
| MseI | TTAA | 1 cut(s) | 219 |
| MspA1I | CMGCKG | 1 cut(s) | 198 |
| NdeII | GATC | 1 cut(s) | 72 |
| PaqCI | CACCTGC | 1 cut(s) | 43 |
| PfeI | GAWTC | 1 cut(s) | 213 |
| PkrI | GCNGC | 1 cut(s) | 284 |
| Psp124BI | GAGCTC | 1 cut(s) | 159 |
| PvuII | CAGCTG | 1 cut(s) | 198 |
| SacI | GAGCTC | 1 cut(s) | 159 |
| SaqAI | TTAA | 1 cut(s) | 219 |
| SatI | GCNGC | 1 cut(s) | 283 |
| Sau3AI | GATC | 1 cut(s) | 72 |
| SduI | GDGCHC | 1 cut(s) | 159 |
| SetI | ASST | 8 cut(s) | 24, 37, 117, 153, 159, 193, 200, 208 |
| SfaNI | GCATC | 1 cut(s) | 157 |
| SmlI | CTYRAG | 2 cut(s) | 116, 152 |
| SmoI | CTYRAG | 2 cut(s) | 116, 152 |
| Sse9I | AATT | 4 cut(s) | 102, 130, 245, 276 |
| SsiI | CCGC | 1 cut(s) | 282 |
| SspI | AATATT | 1 cut(s) | 29 |
| SspMI | CTAG | 1 cut(s) | 23 |
| SstI | GAGCTC | 1 cut(s) | 159 |
| TaaI | ACNGT | 1 cut(s) | 127 |
| TaqI | TCGA | 4 cut(s) | 71, 87, 249, 297 |
| TasI | AATT | 4 cut(s) | 102, 130, 245, 276 |
| TauI | GCSGC | 1 cut(s) | 285 |
| TfiI | GAWTC | 1 cut(s) | 213 |
| Tru1I | TTAA | 1 cut(s) | 219 |
| Tru9I | TTAA | 1 cut(s) | 219 |
| XapI | RAATTY | 2 cut(s) | 130, 245 |
| XmiI | GTMKAC | 1 cut(s) | 54 |
| XspI | CTAG | 1 cut(s) | 23 |