Rorug04G0163400

Proline-rich nuclear receptor coactivator motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0015284
Physical Location & Seq
Reverse (-)
28447350 .. 28451201
3852 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0163400.1

Sequence Viewer

Length: 2505 bp
ATGCAACTGGGTAGTGTTACTTTGTTTTTCTTCTTCATCTTCAGTTTGCTTCCTCCACAGTATGGCGCTGAAGTATATAACATAACTCCTTCACACCCATTAGCAGAGGGACAAACTCTAGTCTCTCCTGGCCTAATATTCGAACTGGGCTTCTTCAGTCCTAATAGTTCTGCTAACAAATATATGGGGTTGTGGCACAAAAGCATATTTCCCCGCAAGTATGTATGGGTGGCTAACAGAGATAATCCTCTTGCAGATACAGACACCATGGCTACTTTGAGAATTGGCGGCAATGGTAACCTGGAGCTTGTAGATGGGAAACAGACTTCTGTCTGGTCAACCAATATATCTAATTGTTCATCTGCAGTTCTCTTAGATAATGGAAACTTTGTTGTCAAAGGTGCTATGGGAGCTCATATGTGGGAGAGTTTTAATAATCCTAGTGACTCACTTCTGCCAAGCATGTTGATGGGCTATGATAGTGCTTCTGGAAAACAGAATTTCTTGACATCTTGGAAAAGTGAAAATGATCCATCACCGGGGATATTCATGGCTGGACTGTCAGCAGAGTTGCCATCACAAACATTCATCTGGATGAATAGATCTCCCCACTGGAGAAGTGGGCCATGGGATAAATCAAAGTTTATTGGTGTACCCAGAATGGAATCTCAGTATCTAAATCCATTTACTGTTGTTGATAATGTGACACAGGGAACAAAATATTTCTCGTACAGTTATGACAAAATTCCAGGTGACAAACTTCTTGCCTATATGGACATATCTTCAGAAGGAATACTGAGATTTATGTTTTCAGAAAGTGGCAAGAACTGGTTTCCTGACTGGGAGTCATGGCAAAACCCATGCGATAATTATGGGGCCTGTGGACCGTTTGGGGTTTGCAAAGCTTTTAACTCTCCAATCAGCTGCAAGTGTTTGAAAGGGTTCAAACCCAAGTCAAATGAAGAGTGGAGCAAAGGAAACTGGACTGGAGGTTGTGTGAGACGAACGAATTTGTCTTGTGAGACACACACAAATGAATCAGTCTCATCAAAAGGAAAAGATGGGTTTTTGAAGGTGGAAAAATTGAAAGTACCCAATTTTCATCAATATCTGACTTCTTTGGCTCAAGACAGGTTTGAGGACTGCAAGATAAAGTGCCTGAGTAATTGTTCTTGCCTGGCGTTCGCTTATGTTAATAACCTAGGGTGTTTGGTCTGGTACAAAGACCTTGTTGATATTCAGCAGTTTTCATCTCTTGGAGAAGATCTTTATGTCCGCCTAGCAGACTCAGAACTAGGTGAAGCAAAGCCCATAAAGTTAATTGCCAGCCTTACAGCTATTGGATTTATGATCATCTTGGTGGCTATAGCCTTCAGTTTTCACTGGTGGCGTGCCAATCAAAAGCGACATGTCAAATTAACAACAAGGCATTTGGAATCAACTAGTTTGATTAAAATTCATAGAGACGATCTTCGAGAATATATAGGAAACCATGATCTCTCGGAGCTAAAGTTATATGATTTTGATAGCATACTAATCGCCACAGACAACTTTAGCATCACAAACAAACTCGGTCAAGGAGGCTTTGGCCCAGTTTATAAGGGGATGCTACCAGAAGGGAAGGAAATAGCTGTGAAGAGACTATCTAGTACCTCAAGACAAGGTGTTGAAGAGTTCAAGAATGAGATGCTATTGATCTCCAATCTTCAACACAAAAATCTTGTTAGGATCATGGGTTGTTGTGTTAAAGAGAATGAGAAGTTACTTATTTACGAATTCATGCCTAACAAAAGCTTGGATACTTTTCTATACGATTCAAGGAAGAGAGCAGTGCTTGATTGGGCTACACGCTTTAATATTATTCAAGGTGTTGCTAAAGGCCTTCTTTATCTCCATCATGATTCCTATGTGAAGGTGATTCATAGAGATCTAAAAGTCAGTAACATCCTCTTAGATGAGAAAATGAATCCAAAAATTTCTGATTTTGGATTAGCACGCATAGTTGAAGGAACGCAGGATCTAGAAAATACTCAGAAGGTTGTGGGAACACGTGGTTATATGTCTCCGGAATATGCCATGGGTGGGATATTTTCTGAAAAATCTGATATCTACAGCTTCGGGGTCTTAGTATTGGAGATTATTAGCAGCAAGAAGAATAGCAACTTCTATTTATATGACCAACAAATTGGCTTCCTTGCCTTTGCTTGGAACTTGTGGAATGAAGGCAGGGCATTGGATTTAGTAGATGAAGTATTGGGTGATTCATACTCCTCATCAGAAGTAATGACTTGCGTGCATGTTGGGCTTCTTTGTGTACAAGACAATGCTGCAGATAGACCAACCATGACAGATGTAACTTCAATGTTAAGTAGCGAGAAAGATGGTCCACATCCAAAGAGATCTGTATTCACTATCCAAAACTCAGTTTATCATCCTGGACCATCCTATGAAAATACTAGTTCCTCCAAAAATGAAGCCAGCATTACAAAGATCGAAGGACGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PNRC

Protein Analysis

834

Amino Acids

93.81

Weight (kDa)

6.54

Isoelectric Point (pI)

36.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 173 6e-27 D-mannose binding lectin
S_locus_glycop PF00954 205 - 319 5e-26 S-locus glycoprotein domain
PAN_2 PF08276 350 - 413 2.4e-16 PAN-like domain
Pkinase PF00069 519 - 718 1.5e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 520 - 787 1.5e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015284)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G21570
fragaria_vesca FvH4_4g16740
malus_domestica MD03G1009700.v1.1
prunus_persica Prupe.1G145900_v2.0.a1
pyrus_communis pycom02g14100 pycom13g15250 pycom16g15000
rosa_chinensis RchiOBHm_Chr4g0420321
rosa_laevigata RLG00000007774
rosa_multiflora Rmu_sc0001767.1_g000003
rosa_roxburghii Rroxscaffold_5G00362970
rosa_rugosa Rorug04G0163400
rosa_samantha Rh4BG227300 Rh4CG238500 Rh4DG222900
rosa_wichuraiana Rw4G019350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1599
AccB7I CCANNNNNTGG 1 cut(s) 62
AccIII TCCGGA 1 cut(s) 2065
AciI CCGC 3 cut(s) 214, 288, 1276
AclWI GGATC 3 cut(s) 524, 1736, 2025
AcsI RAATTY 6 cut(s) 499, 744, 1009, 1455, 1775, 1974
AcuI CTGAAG 5 cut(s) 25, 90, 139, 768, 1357
AcvI CACGTG 1 cut(s) 2051
AfaI GTAC 6 cut(s) 654, 731, 1092, 1220, 1651, 2316
AfiI CCNNNNNNNGG 4 cut(s) 62, 539, 2082, 2205
AflIII ACRYGT 2 cut(s) 1408, 2048
AhdI GACNNNNNGTC 1 cut(s) 844
AhlI ACTAGT 2 cut(s) 1442, 2456
AjnI CCWGG 5 cut(s) 127, 300, 748, 1176, 2434
AluBI AGCT 9 cut(s) 307, 413, 905, 924, 1337, 1507, 1631, 1794, 2115
AluI AGCT 9 cut(s) 307, 413, 905, 924, 1337, 1507, 1631, 1794, 2115
Alw21I GWGCWC 1 cut(s) 415
Alw26I GTCTC 7 cut(s) 127, 994, 1016, 1048, 1458, 1633, 2067
AlwI GGATC 3 cut(s) 524, 1736, 2025
Aor13HI TCCGGA 1 cut(s) 2065
AoxI GGCC 5 cut(s) 130, 623, 876, 1588, 1879
ApeKI GCWGC 3 cut(s) 924, 2145, 2327
ApoI RAATTY 6 cut(s) 499, 744, 1009, 1455, 1775, 1974
Asp700I GAANNNNTTC 1 cut(s) 941
AspA2I CCTAGG 1 cut(s) 1201
AspLEI GCGC 1 cut(s) 68
AspS9I GGNCC 6 cut(s) 623, 876, 884, 1589, 2384, 2438
AsuC2I CCSGG 1 cut(s) 540
AsuHPI GGTGA 5 cut(s) 528, 764, 1310, 1927, 2270
AsuII TTCGAA 1 cut(s) 141
AvaII GGWCC 3 cut(s) 884, 2384, 2438
AvrII CCTAGG 1 cut(s) 1201
BanII GRGCYC 1 cut(s) 415
BbrPI CACGTG 1 cut(s) 2051
Bbv12I GWGCWC 1 cut(s) 415
BbvI GCAGC 3 cut(s) 911, 2157, 2314
BccI CCATC 8 cut(s) 308, 463, 541, 583, 1055, 1902, 2375, 2449
BcgI CGANNNNNNTGC 2 cut(s) 1519, 1553
BciT130I CCWGG 5 cut(s) 129, 302, 750, 1178, 2436
BciVI GTATCC 1 cut(s) 1792
BclI TGATCA 1 cut(s) 1350
BcnI CCSGG 1 cut(s) 540
BcoDI GTCTC 7 cut(s) 127, 994, 1016, 1048, 1458, 1633, 2067
BcuI ACTAGT 2 cut(s) 1442, 2456
BfaI CTAG 9 cut(s) 119, 441, 1202, 1280, 1295, 1443, 1647, 2021, 2457
BfmI CTRYAG 4 cut(s) 363, 1365, 2110, 2328
BfoI RGCGCY 1 cut(s) 69
BfuI GTATCC 1 cut(s) 1792
BglII AGATCT 4 cut(s) 602, 1264, 1927, 2399
BisI GCNGC 4 cut(s) 289, 925, 2146, 2328
BlnI CCTAGG 1 cut(s) 1201
BlsI GCNGC 4 cut(s) 290, 926, 2147, 2329
Bme1390I CCNGG 6 cut(s) 129, 302, 540, 750, 1178, 2436
Bme18I GGWCC 3 cut(s) 884, 2384, 2438
BmeRI GACNNNNNGTC 1 cut(s) 844
BmgT120I GGNCC 6 cut(s) 623, 876, 884, 1589, 2384, 2438
BmiI GGNNCC 1 cut(s) 877
BmrFI CCNGG 6 cut(s) 129, 302, 540, 750, 1178, 2436
BmrI ACTGGG 4 cut(s) 17, 155, 850, 1586
BmsI GCATC 3 cut(s) 1566, 1596, 1677
BmuI ACTGGG 4 cut(s) 17, 155, 850, 1586
BoxI GACNNNNGTC 1 cut(s) 329
BpmI CTGGAG 3 cut(s) 323, 634, 1008
Bpu14I TTCGAA 1 cut(s) 141
BpuEI CTTGAG 2 cut(s) 1110, 1639
BpuMI CCSGG 1 cut(s) 540
BsaAI YACGTR 1 cut(s) 2051
BsaJI CCNNGG 5 cut(s) 267, 539, 626, 1201, 2076
BsaWI WCCGGW 1 cut(s) 2065
BsaXI ACNNNNNCTCC 4 cut(s) 981, 1011, 1496, 1526
Bsc4I CCNNNNNNNGG 4 cut(s) 62, 539, 2082, 2205
Bse1I ACTGG 9 cut(s) 12, 150, 617, 833, 845, 986, 991, 1388, 1592
Bse3DI GCAATG 1 cut(s) 298
BseAI TCCGGA 1 cut(s) 2065
BseBI CCWGG 5 cut(s) 129, 302, 750, 1178, 2436
BseDI CCNNGG 5 cut(s) 267, 539, 626, 1201, 2076
BseGI GGATG 6 cut(s) 600, 1611, 1944, 2389, 2431, 2441
BseLI CCNNNNNNNGG 4 cut(s) 62, 539, 2082, 2205
BseMI GCAATG 1 cut(s) 298
BseMII CTCAG 6 cut(s) 683, 788, 1151, 1302, 2045, 2436
BseNI ACTGG 9 cut(s) 12, 150, 617, 833, 845, 986, 991, 1388, 1592
BseRI GAGGAG 1 cut(s) 2260
BseXI GCAGC 3 cut(s) 911, 2157, 2314
BshFI GGCC 5 cut(s) 132, 625, 878, 1590, 1881
BsiHKAI GWGCWC 1 cut(s) 415
BsiSI CCGG 2 cut(s) 539, 2066
BslFI GGGAC 1 cut(s) 123
BslI CCNNNNNNNGG 4 cut(s) 62, 539, 2082, 2205
BsmAI GTCTC 7 cut(s) 127, 994, 1016, 1048, 1458, 1633, 2067
BsmBI CGTCTC 2 cut(s) 994, 1458
BsmFI GGGAC 1 cut(s) 123
BsnI GGCC 5 cut(s) 132, 625, 878, 1590, 1881
Bsp119I TTCGAA 1 cut(s) 141
Bsp1286I GDGCHC 1 cut(s) 415
Bsp13I TCCGGA 1 cut(s) 2065
Bsp1407I TGTACA 1 cut(s) 2314
Bsp19I CCATGG 3 cut(s) 267, 626, 2076
BspACI CCGC 3 cut(s) 214, 288, 1276
BspANI GGCC 5 cut(s) 132, 625, 878, 1590, 1881
BspCNI CTCAG 6 cut(s) 682, 789, 1152, 1301, 2044, 2435
BspEI TCCGGA 1 cut(s) 2065
BspHI TCATGA 1 cut(s) 1897
BspLI GGNNCC 1 cut(s) 877
BspMAI CTGCAG 2 cut(s) 367, 2332
BspPI GGATC 3 cut(s) 524, 1736, 2025
BspT104I TTCGAA 1 cut(s) 141
BsrDI GCAATG 1 cut(s) 298
BsrGI TGTACA 1 cut(s) 2314
BsrI ACTGG 9 cut(s) 12, 150, 617, 833, 845, 986, 991, 1388, 1592
BssECI CCNNGG 5 cut(s) 267, 539, 626, 1201, 2076
BssT1I CCWWGG 4 cut(s) 267, 626, 1201, 2076
Bst2UI CCWGG 5 cut(s) 129, 302, 750, 1178, 2436
Bst4CI ACNGT 5 cut(s) 60, 561, 691, 734, 888
Bst6I CTCTTC 4 cut(s) 957, 1631, 1665, 1817
BstAUI TGTACA 1 cut(s) 2314
BstBAI YACGTR 1 cut(s) 2051
BstBI TTCGAA 1 cut(s) 141
BstC8I GCNNGC 5 cut(s) 1327, 1392, 1996, 2294, 2479
BstDEI CTNAG 9 cut(s) 373, 669, 797, 1160, 1288, 1951, 2031, 2125, 2422
BstDSI CCRYGG 3 cut(s) 267, 626, 2076
BstEII GGTNACC 1 cut(s) 296
BstF5I GGATG 6 cut(s) 600, 1611, 1944, 2389, 2431, 2441
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 1 cut(s) 68
BstMAI GTCTC 7 cut(s) 127, 994, 1016, 1048, 1458, 1633, 2067
BstMWI GCNNNNNNNGC 2 cut(s) 410, 2302
BstNI CCWGG 5 cut(s) 129, 302, 750, 1178, 2436
BstNSI RCATGY 3 cut(s) 466, 1412, 2300
BstPAI GACNNNNGTC 1 cut(s) 329
BstPI GGTNACC 1 cut(s) 296
BstSCI CCNGG 6 cut(s) 127, 300, 538, 748, 1176, 2434
BstSFI CTRYAG 4 cut(s) 363, 1365, 2110, 2328
BstV1I GCAGC 3 cut(s) 911, 2157, 2314
BstX2I RGATCY 5 cut(s) 602, 1264, 1927, 2017, 2399
BstXI CCANNNNNNTGG 1 cut(s) 2186
BstYI RGATCY 5 cut(s) 602, 1264, 1927, 2017, 2399
BsuI GTATCC 1 cut(s) 1792
BsuRI GGCC 5 cut(s) 132, 625, 878, 1590, 1881
BtgI CCRYGG 3 cut(s) 267, 626, 2076
BtsCI GGATG 6 cut(s) 600, 1611, 1944, 2389, 2431, 2441
BtsI GCAGTG 1 cut(s) 1836
BtsIMutI CAGTG 3 cut(s) 610, 1381, 1836
Cac8I GCNNGC 5 cut(s) 1327, 1392, 1996, 2294, 2479
CciI TCATGA 1 cut(s) 1897
CfoI GCGC 1 cut(s) 68
Cfr13I GGNCC 6 cut(s) 623, 876, 884, 1589, 2384, 2438
Csp6I GTAC 6 cut(s) 653, 730, 1091, 1219, 1650, 2315
CviQI GTAC 6 cut(s) 653, 730, 1091, 1219, 1650, 2315
DdeI CTNAG 9 cut(s) 373, 669, 797, 1160, 1288, 1951, 2031, 2125, 2422
DriI GACNNNNNGTC 1 cut(s) 844
Eam1104I CTCTTC 4 cut(s) 957, 1631, 1665, 1817
Eam1105I GACNNNNNGTC 1 cut(s) 844
EarI CTCTTC 4 cut(s) 957, 1631, 1665, 1817
EciI GGCGGA 1 cut(s) 1265
Ecl136II GAGCTC 1 cut(s) 413
Eco130I CCWWGG 4 cut(s) 267, 626, 1201, 2076
Eco147I AGGCCT 1 cut(s) 1881
Eco24I GRGCYC 1 cut(s) 415
Eco32I GATATC 1 cut(s) 2107
Eco47I GGWCC 3 cut(s) 884, 2384, 2438
Eco53kI GAGCTC 1 cut(s) 413
Eco57I CTGAAG 5 cut(s) 25, 90, 139, 768, 1357
Eco72I CACGTG 1 cut(s) 2051
Eco91I GGTNACC 1 cut(s) 296
EcoICRI GAGCTC 1 cut(s) 413
EcoO109I RGGNCCY 1 cut(s) 876
EcoO65I GGTNACC 1 cut(s) 296
EcoRI GAATTC 1 cut(s) 1775
EcoRII CCWGG 5 cut(s) 127, 300, 748, 1176, 2434
EcoRV GATATC 1 cut(s) 2107
EcoT14I CCWWGG 4 cut(s) 267, 626, 1201, 2076
EcoT38I GRGCYC 1 cut(s) 415
ErhI CCWWGG 4 cut(s) 267, 626, 1201, 2076
Esp3I CGTCTC 2 cut(s) 994, 1458
FalI AAGNNNNNCTT 2 cut(s) 1869, 1901
FaqI GGGAC 1 cut(s) 123
FauI CCCGC 1 cut(s) 221
FauNDI CATATG 1 cut(s) 417
FbaI TGATCA 1 cut(s) 1350
Fnu4HI GCNGC 4 cut(s) 289, 925, 2146, 2328
FokI GGATG 6 cut(s) 607, 1618, 1931, 2376, 2418, 2428
FriOI GRGCYC 1 cut(s) 415
Fsp4HI GCNGC 4 cut(s) 289, 925, 2146, 2328
FspBI CTAG 9 cut(s) 119, 441, 1202, 1280, 1295, 1443, 1647, 2021, 2457
GlaI GCGC 1 cut(s) 67
GluI GCNGC 4 cut(s) 289, 925, 2146, 2328
GsuI CTGGAG 3 cut(s) 323, 634, 1008
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 5 cut(s) 132, 625, 878, 1590, 1881
HapII CCGG 2 cut(s) 539, 2066
HhaI GCGC 1 cut(s) 68
Hin6I GCGC 1 cut(s) 66
HinP1I GCGC 1 cut(s) 66
HincII GTYRAC 1 cut(s) 339
HindII GTYRAC 1 cut(s) 339
HindIII AAGCTT 2 cut(s) 903, 1792
HpaII CCGG 2 cut(s) 539, 2066
HphI GGTGA 5 cut(s) 528, 764, 1310, 1927, 2270
Hpy166II GTNNAC 5 cut(s) 339, 653, 884, 2315, 2387
Hpy8I GTNNAC 5 cut(s) 339, 653, 884, 2315, 2387
HpyCH4III ACNGT 5 cut(s) 60, 561, 691, 734, 888
HpyCH4IV ACGT 2 cut(s) 2050, 2500
HpyCH4V TGCA 8 cut(s) 4, 254, 365, 900, 927, 1146, 2296, 2330
HpyF10VI GCNNNNNNNGC 2 cut(s) 410, 2302
HpyF3I CTNAG 9 cut(s) 373, 669, 797, 1160, 1288, 1951, 2031, 2125, 2422
HpySE526I ACGT 2 cut(s) 2050, 2500
HspAI GCGC 1 cut(s) 66
Kpn2I TCCGGA 1 cut(s) 2065
Ksp22I TGATCA 1 cut(s) 1350
LmnI GCTCC 4 cut(s) 304, 410, 969, 1504
Lsp1109I GCAGC 3 cut(s) 911, 2157, 2314
LweI GCATC 3 cut(s) 1566, 1596, 1677
MaeI CTAG 9 cut(s) 119, 441, 1202, 1280, 1295, 1443, 1647, 2021, 2457
MaeII ACGT 2 cut(s) 2050, 2500
MaeIII GTNAC 8 cut(s) 16, 296, 443, 703, 752, 1761, 1940, 2353
MflI RGATCY 5 cut(s) 602, 1264, 1927, 2017, 2399
MhlI GDGCHC 1 cut(s) 415
MlyI GAGTC 3 cut(s) 440, 854, 1280
MroI TCCGGA 1 cut(s) 2065
MroXI GAANNNNTTC 1 cut(s) 941
MslI CAYNNNNRTG 4 cut(s) 467, 593, 1032, 1358
MspA1I CMGCKG 1 cut(s) 924
MspI CCGG 2 cut(s) 539, 2066
MspR9I CCNGG 6 cut(s) 129, 302, 540, 750, 1178, 2436
MvaI CCWGG 5 cut(s) 129, 302, 750, 1178, 2436
MwoI GCNNNNNNNGC 2 cut(s) 410, 2302
NciI CCSGG 1 cut(s) 540
NcoI CCATGG 3 cut(s) 267, 626, 2076
NdeI CATATG 1 cut(s) 417
NlaIV GGNNCC 1 cut(s) 877
NmuCI GTSAC 3 cut(s) 443, 703, 752
NspI RCATGY 3 cut(s) 466, 1412, 2300
NspV TTCGAA 1 cut(s) 141
PagI TCATGA 1 cut(s) 1897
PceI AGGCCT 1 cut(s) 1881
PciI ACATGT 1 cut(s) 1408
PdmI GAANNNNTTC 1 cut(s) 941
PfeI GAWTC 8 cut(s) 665, 1037, 1436, 1814, 1901, 1918, 1966, 2261
PflMI CCANNNNNTGG 1 cut(s) 62
PfoI TCCNGGA 1 cut(s) 2434
PkrI GCNGC 4 cut(s) 290, 926, 2147, 2329
PleI GAGTC 3 cut(s) 440, 853, 1280
PmaCI CACGTG 1 cut(s) 2051
PmlI CACGTG 1 cut(s) 2051
PpsI GAGTC 3 cut(s) 440, 853, 1280
Ppu21I YACGTR 1 cut(s) 2051
PscI ACATGT 1 cut(s) 1408
PshAI GACNNNNGTC 1 cut(s) 329
PsiI TTATAA 1 cut(s) 1599
Psp124BI GAGCTC 1 cut(s) 415
Psp6I CCWGG 5 cut(s) 127, 300, 748, 1176, 2434
PspCI CACGTG 1 cut(s) 2051
PspEI GGTNACC 1 cut(s) 296
PspGI CCWGG 5 cut(s) 127, 300, 748, 1176, 2434
PspN4I GGNNCC 1 cut(s) 877
PspPI GGNCC 6 cut(s) 623, 876, 884, 1589, 2384, 2438
PstI CTGCAG 2 cut(s) 367, 2332
PsuI RGATCY 5 cut(s) 602, 1264, 1927, 2017, 2399
PvuII CAGCTG 1 cut(s) 924
RsaI GTAC 6 cut(s) 654, 731, 1092, 1220, 1651, 2316
RsaNI GTAC 6 cut(s) 653, 730, 1091, 1219, 1650, 2315
RseI CAYNNNNRTG 4 cut(s) 467, 593, 1032, 1358
SacI GAGCTC 1 cut(s) 415
SatI GCNGC 4 cut(s) 289, 925, 2146, 2328
Sau96I GGNCC 6 cut(s) 623, 876, 884, 1589, 2384, 2438
SchI GAGTC 3 cut(s) 440, 854, 1280
ScrFI CCNGG 6 cut(s) 129, 302, 540, 750, 1178, 2436
SduI GDGCHC 1 cut(s) 415
SfaNI GCATC 3 cut(s) 1566, 1596, 1677
SfcI CTRYAG 4 cut(s) 363, 1365, 2110, 2328
SfuI TTCGAA 1 cut(s) 141
SinI GGWCC 3 cut(s) 884, 2384, 2438
SmiMI CAYNNNNRTG 4 cut(s) 467, 593, 1032, 1358
SmlI CTYRAG 2 cut(s) 1125, 1654
SmoI CTYRAG 2 cut(s) 1125, 1654
SpeI ACTAGT 2 cut(s) 1442, 2456
SseBI AGGCCT 1 cut(s) 1881
SsiI CCGC 3 cut(s) 214, 288, 1276
SspI AATATT 3 cut(s) 138, 722, 1858
SspMI CTAG 9 cut(s) 119, 441, 1202, 1280, 1295, 1443, 1647, 2021, 2457
SstI GAGCTC 1 cut(s) 415
StuI AGGCCT 1 cut(s) 1881
StyD4I CCNGG 6 cut(s) 127, 300, 538, 748, 1176, 2434
StyI CCWWGG 4 cut(s) 267, 626, 1201, 2076
TaaI ACNGT 5 cut(s) 60, 561, 691, 734, 888
TaiI ACGT 2 cut(s) 2053, 2503
TaqI TCGA 3 cut(s) 141, 1474, 2493
TaqII GACCGA 1 cut(s) 1562
TatI WGTACW 1 cut(s) 2314
TauI GCSGC 1 cut(s) 291
TfiI GAWTC 8 cut(s) 665, 1037, 1436, 1814, 1901, 1918, 1966, 2261
TscAI CASTG 3 cut(s) 617, 1388, 1836
TseFI GTSAC 3 cut(s) 443, 703, 752
TseI GCWGC 3 cut(s) 924, 2145, 2327
Tsp45I GTSAC 3 cut(s) 443, 703, 752
TspRI CASTG 3 cut(s) 617, 1388, 1836
Van91I CCANNNNNTGG 1 cut(s) 62
VpaK11BI GGWCC 3 cut(s) 884, 2384, 2438
XapI RAATTY 6 cut(s) 499, 744, 1009, 1455, 1775, 1974
XbaI TCTAGA 1 cut(s) 2020
XceI RCATGY 3 cut(s) 466, 1412, 2300
XcmI CCANNNNNNNNNTGG 1 cut(s) 617
XmaJI CCTAGG 1 cut(s) 1201
XmnI GAANNNNTTC 1 cut(s) 941
XspI CTAG 9 cut(s) 119, 441, 1202, 1280, 1295, 1443, 1647, 2021, 2457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.