Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0015366

Physical Location & Seq

Genomic Coordinates Forward (+)

30366951 .. 30374276

Gene Structure 7326 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0172700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGAAGGAGAATATGCAAGATCCTGCTCAACATAGCCATACACAAGGTGACGCTGTAAATCCAAGCGGTGGTAAGGATCAAGCAATTAATGCAAGAATAACAGCCATATGGAAAGCATTAGTCATGCAGATTTCCTTATGGTCAGAACATATCCGTGAACATCATTTACAAACGAACGTACAAGGAACCTGGAATACCATACTCGTATTCTCATGTGTGATTGCAGTCTCAGTTGATCCTTTGTTCTTTTACCTTCCGATCATTAATGAGGAAATCAAGTGCGTTGGAGTGGACAAAAATTTGAGGACTGCTGCTCTTCTTTTGCGCGCTGTCACTGATATTGCTTTCATCATGAACATTTTCTATGAAATTAAAAATGTCATCGAAAATCTAAAATCTAGAGCAAAGTCGATGAAAAGTAAAGGAAAGCAGCTAATTCCCAGAAGTTGGTTCCTTAAGGAATTAGCTCGAAAGATGCCATGGCACTCGATTACAATTGATATTCTTGCGGTTCTCCCTATCCCACAAGTGCTAGTGACTGTTTTCTTCAAAATGAGAAGCTCCAAATATCTTGGCCGAAGAAAGATTATTGTTGTCTTTCTTCTTGCCCAATATTTACCAAGAATTTATCGTAATCACCATTCTTCACAGAAATTCAAGCAAAGTAAGGGAGTATGGATCCAAGGTGTATTCTATTTTTTCTTGTATATCCTCGCCAGTCATGTGCTGGGAGGTTTTTGGTATTTTTTCTCTATTCAACGAGAGACAGCTTGTTGGTACCAAGCTTGTATGAAGCATAGTACAAGTGAATGCAATTTTTATTGCAATCAAGACATTTCCTCTAGAAATATGACATTCATTAGTTCTCTAGATGAATTTTGCCTTGTTGATGTTCCGGCAAATGCGACCGCACCATTTCATTTTGGAATATTTCTTGATTCCCTTAAAAGTGGTAACACGGGGCAAATAAATTTCTCAAAGAAGATCTCTTACTCATTTTGGTGGGGACTACGAAATCTTAGTAACTTTGGGACGAACTTGGAAACAAGTACGTATGTGTGGGAAAACTGCTTTGCGATCCTTACATCTACTGTTGGCTTGCTTCTTTTCTTATATCTCATTGGCAAAGTACAGACATTTATCTCAATGCAAACTGAAAAATCAGAGGAGAGAAGAAAAAAGCTTAGCTCGACATTGATTGGTGTACAACTCTGGATGAATAAAAATGATCTGAATACAGAGATAAAGAACGAAATCACCGAAAATGTTAAAAACAAATGGGAGAAAATCAAAGATGCTGATGTGGAAAACATATTATCTATTCTCCCTCTGCAAAACCGAACATCTCTAAAGCGATTTCTCTGCATGGAAATACTGAGGAAGCAGTTGAATATGCCAGGATCGGTCTTTAAGGGAGTTAAGGATATCGAAAAGAAACCAGGCCAAGAGAATAAAGATACCATACAAGAAAAAATGTTGACAACCATTTGTGACTTTCTGAAGCCGGTGATCTACCCAGATGGTAGTCTTAAATCTTTGGACAACCTTCCTGTGTTGAAAGCAAATGCCAAAGCTCATGGAAAAGTAGAAGGATTTGTTCTTATGGCCAAGGACGTGAAGGTTGTAGTCGACAAATACAAAATGTATTGGGGTTTCCCCGATTCTCATGTAAAAGAGGAGGTAGTACTTGAAACCGTAAAAAAATTCTGTCAAGTATTGAAGCGTATGAAAGGTCAACAAAAGGTCCAACCGGAGCATCCAAAAGTACTTGATGTTCTACCAACATCAGCAGCCATGGCCCCTCCACCGAAGGATGAAGTAGTACTTAAGGTTCGACCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0010015 GO:0010022 GO:0010073 GO:0010101 GO:0010102 GO:0010432 GO:0010451 GO:0010468 GO:0010556 GO:0010557 GO:0010582 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0022622 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0035266 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048364 GO:0048367 GO:0048507 GO:0048518 GO:0048522 GO:0048527 GO:0048528 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051173 GO:0051239 GO:0051252 GO:0051254 GO:0060255 GO:0060688 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1900618 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:1905428 GO:2000026 GO:2000032 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

613

Amino Acids

70.39

Weight (kDa)

9.46

Isoelectric Point (pI)

42.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015366)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18560
fragaria_vesca	FvH4_4g17630
malus_domestica	MD13G1171200.v1.1 MD16G1172800.v1.1
prunus_persica	Prupe.1G139600_v2.0.a1
pyrus_communis	pycom16g14490
rosa_chinensis	RchiOBHm_Chr4g0421551
rosa_laevigata	RLG00000007668
rosa_multiflora	Rmu_sc0010734.1_g000007
rosa_roxburghii	Rroxscaffold_5G00363800
rosa_rugosa	Rorug04G0172700
rosa_samantha	Rh4AG233100 Rh4BG235800 Rh4CG247400 Rh4DG231700
rosa_wichuraiana	Rw4G020100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	777
AccB1I	GGYRCC	1 cut(s)	777
AccB7I	CCANNNNNTGG	2 cut(s)	68, 447
AccI	GTMKAC	1 cut(s)	1629
AccII	CGCG	1 cut(s)	327
AciI	CCGC	3 cut(s)	66, 509, 909
AclWI	GGATC	7 cut(s)	14, 84, 230, 673, 686, 1072, 1408
AcoI	YGGCCR	2 cut(s)	574, 1605
AcsI	RAATTY	6 cut(s)	298, 624, 653, 875, 970, 1703
AcuI	CTGAAG	1 cut(s)	1520
AdeI	CACNNNGTG	1 cut(s)	47
AfaI	GTAC	9 cut(s)	180, 779, 802, 1051, 1131, 1206, 1686, 1767, 1824
AfiI	CCNNNNNNNGG	2 cut(s)	68, 447
AflII	CTTAAG	2 cut(s)	455, 1826
AgsI	TTSAA	7 cut(s)	550, 658, 758, 1390, 1558, 1691, 1720
AjiI	CACGTC	1 cut(s)	1615
AjnI	CCWGG	3 cut(s)	188, 1396, 1438
AluBI	AGCT	8 cut(s)	433, 467, 561, 770, 785, 1183, 1188, 1574
AluI	AGCT	8 cut(s)	433, 467, 561, 770, 785, 1183, 1188, 1574
Alw26I	GTCTC	2 cut(s)	232, 758
AlwI	GGATC	7 cut(s)	14, 84, 230, 673, 686, 1072, 1408
AoxI	GGCC	4 cut(s)	574, 1441, 1605, 1797
ApeKI	GCWGC	3 cut(s)	311, 430, 1790
ApoI	RAATTY	6 cut(s)	298, 624, 653, 875, 970, 1703
AseI	ATTAAT	2 cut(s)	87, 264
Asp700I	GAANNNNTTC	1 cut(s)	359
Asp718I	GGTACC	1 cut(s)	777
AspLEI	GCGC	2 cut(s)	327, 329
AspS9I	GGNCC	2 cut(s)	1744, 1798
AsuHPI	GGTGA	4 cut(s)	59, 629, 1249, 1519
AvaII	GGWCC	1 cut(s)	1744
BalI	TGGCCA	1 cut(s)	1607
BamHI	GGATCC	1 cut(s)	678
BanI	GGYRCC	1 cut(s)	777
BarI	GAAGNNNNNNTAC	2 cut(s)	974, 1006
BbvI	GCAGC	3 cut(s)	298, 442, 1802
BccI	CCATC	1 cut(s)	1514
BcgI	CGANNNNNNTGC	2 cut(s)	1344, 1378
BciT130I	CCWGG	3 cut(s)	190, 1398, 1440
BcoDI	GTCTC	2 cut(s)	232, 758
BfaI	CTAG	4 cut(s)	399, 533, 843, 869
BfrI	CTTAAG	2 cut(s)	455, 1826
BglII	AGATCT	1 cut(s)	984
BisI	GCNGC	3 cut(s)	312, 431, 1791
BlpI	GCTNAGC	1 cut(s)	1184
BlsI	GCNGC	3 cut(s)	313, 432, 1792
BmcAI	AGTACT	3 cut(s)	1686, 1767, 1824
Bme1390I	CCNGG	3 cut(s)	190, 1398, 1440
Bme18I	GGWCC	1 cut(s)	1744
BmgBI	CACGTC	1 cut(s)	1615
BmgT120I	GGNCC	2 cut(s)	1744, 1798
BmiI	GGNNCC	5 cut(s)	187, 452, 680, 779, 1800
BmrFI	CCNGG	3 cut(s)	190, 1398, 1440
BmsI	GCATC	3 cut(s)	465, 1285, 1765
Bpu1102I	GCTNAGC	1 cut(s)	1184
BsaAI	YACGTR	1 cut(s)	1053
BsaJI	CCNNGG	4 cut(s)	479, 682, 1608, 1794
BsaWI	WCCGGW	1 cut(s)	1750
Bsc4I	CCNNNNNNNGG	2 cut(s)	68, 447
Bse118I	RCCGGY	1 cut(s)	1504
Bse1I	ACTGG	1 cut(s)	717
BseBI	CCWGG	3 cut(s)	190, 1398, 1440
BseDI	CCNNGG	4 cut(s)	479, 682, 1608, 1794
BseGI	GGATG	3 cut(s)	1221, 1756, 1819
BseLI	CCNNNNNNNGG	2 cut(s)	68, 447
BseMII	CTCAG	2 cut(s)	243, 1367
BseNI	ACTGG	1 cut(s)	717
BsePI	GCGCGC	1 cut(s)	325
BseRI	GAGGAG	2 cut(s)	1181, 1691
BseXI	GCAGC	3 cut(s)	298, 442, 1802
BseYI	CCCAGC	1 cut(s)	727
Bsh1236I	CGCG	1 cut(s)	327
Bsh1285I	CGRYCG	1 cut(s)	909
BshFI	GGCC	4 cut(s)	576, 1443, 1607, 1799
BshNI	GGYRCC	1 cut(s)	777
BsiEI	CGRYCG	1 cut(s)	909
BsiSI	CCGG	3 cut(s)	896, 1505, 1751
BslFI	GGGAC	2 cut(s)	1020, 1045
BslI	CCNNNNNNNGG	2 cut(s)	68, 447
BsmAI	GTCTC	2 cut(s)	232, 758
BsmFI	GGGAC	2 cut(s)	1020, 1045
BsmI	GAATGC	1 cut(s)	815
BsnI	GGCC	4 cut(s)	576, 1443, 1607, 1799
Bsp1407I	TGTACA	1 cut(s)	1204
Bsp1720I	GCTNAGC	1 cut(s)	1184
Bsp19I	CCATGG	2 cut(s)	479, 1794
BspACI	CCGC	3 cut(s)	66, 509, 909
BspANI	GGCC	4 cut(s)	576, 1443, 1607, 1799
BspCNI	CTCAG	2 cut(s)	242, 1368
BspFNI	CGCG	1 cut(s)	327
BspHI	TCATGA	1 cut(s)	351
BspLI	GGNNCC	5 cut(s)	187, 452, 680, 779, 1800
BspPI	GGATC	7 cut(s)	14, 84, 230, 673, 686, 1072, 1408
BspQI	GCTCTTC	1 cut(s)	321
BspT107I	GGYRCC	1 cut(s)	777
BspTI	CTTAAG	2 cut(s)	455, 1826
BsrFI	RCCGGY	1 cut(s)	1504
BsrGI	TGTACA	1 cut(s)	1204
BsrI	ACTGG	1 cut(s)	717
BssAI	RCCGGY	1 cut(s)	1504
BssECI	CCNNGG	4 cut(s)	479, 682, 1608, 1794
BssHII	GCGCGC	1 cut(s)	325
BssT1I	CCWWGG	4 cut(s)	479, 682, 1608, 1794
Bst2UI	CCWGG	3 cut(s)	190, 1398, 1440
Bst4CI	ACNGT	3 cut(s)	541, 1093, 1696
Bst6I	CTCTTC	1 cut(s)	321
BstAFI	CTTAAG	2 cut(s)	455, 1826
BstAPI	GCANNNNNTGC	1 cut(s)	89
BstAUI	TGTACA	1 cut(s)	1204
BstBAI	YACGTR	1 cut(s)	1053
BstC8I	GCNNGC	2 cut(s)	327, 1100
BstDEI	CTNAG	4 cut(s)	229, 1019, 1184, 1376
BstDSI	CCRYGG	2 cut(s)	479, 1794
BstF5I	GGATG	3 cut(s)	1221, 1756, 1819
BstFNI	CGCG	1 cut(s)	327
BstHHI	GCGC	2 cut(s)	327, 329
BstMAI	GTCTC	2 cut(s)	232, 758
BstMCI	CGRYCG	1 cut(s)	909
BstMWI	GCNNNNNNNGC	2 cut(s)	89, 1796
BstNI	CCWGG	3 cut(s)	190, 1398, 1440
BstSCI	CCNGG	3 cut(s)	188, 1396, 1438
BstSNI	TACGTA	1 cut(s)	1053
BstUI	CGCG	1 cut(s)	327
BstV1I	GCAGC	3 cut(s)	298, 442, 1802
BstX2I	RGATCY	3 cut(s)	19, 678, 984
BstYI	RGATCY	3 cut(s)	19, 678, 984
BsuRI	GGCC	4 cut(s)	576, 1443, 1607, 1799
BtgI	CCRYGG	2 cut(s)	479, 1794
BtrI	CACGTC	1 cut(s)	1615
BtsCI	GGATG	3 cut(s)	1221, 1756, 1819
BtsIMutI	CAGTG	1 cut(s)	333
Cac8I	GCNNGC	2 cut(s)	327, 1100
CciI	TCATGA	1 cut(s)	351
CfoI	GCGC	2 cut(s)	327, 329
Cfr10I	RCCGGY	1 cut(s)	1504
Cfr13I	GGNCC	2 cut(s)	1744, 1798
CseI	GACGC	1 cut(s)	59
Csp6I	GTAC	9 cut(s)	179, 778, 801, 1050, 1130, 1205, 1685, 1766, 1823
CviAII	CATG	9 cut(s)	124, 213, 352, 480, 722, 1366, 1577, 1667, 1795
CviQI	GTAC	9 cut(s)	179, 778, 801, 1050, 1130, 1205, 1685, 1766, 1823
DdeI	CTNAG	4 cut(s)	229, 1019, 1184, 1376
DraIII	CACNNNGTG	1 cut(s)	47
EaeI	YGGCCR	2 cut(s)	574, 1605
Eam1104I	CTCTTC	1 cut(s)	321
EarI	CTCTTC	1 cut(s)	321
Eco105I	TACGTA	1 cut(s)	1053
Eco130I	CCWWGG	4 cut(s)	479, 682, 1608, 1794
Eco32I	GATATC	1 cut(s)	1426
Eco47I	GGWCC	1 cut(s)	1744
Eco57I	CTGAAG	1 cut(s)	1520
EcoRII	CCWGG	3 cut(s)	188, 1396, 1438
EcoRV	GATATC	1 cut(s)	1426
EcoT14I	CCWWGG	4 cut(s)	479, 682, 1608, 1794
ErhI	CCWWGG	4 cut(s)	479, 682, 1608, 1794
FaeI	CATG	9 cut(s)	127, 216, 355, 483, 725, 1369, 1580, 1670, 1798
FalI	AAGNNNNNCTT	2 cut(s)	1809, 1841
FaqI	GGGAC	2 cut(s)	1020, 1045
FatI	CATG	9 cut(s)	123, 212, 351, 479, 721, 1365, 1576, 1666, 1794
FauNDI	CATATG	1 cut(s)	107
FblI	GTMKAC	1 cut(s)	1629
Fnu4HI	GCNGC	3 cut(s)	312, 431, 1791
FokI	GGATG	3 cut(s)	1228, 1743, 1826
Fsp4HI	GCNGC	3 cut(s)	312, 431, 1791
FspBI	CTAG	4 cut(s)	399, 533, 843, 869
GlaI	GCGC	2 cut(s)	326, 328
GluI	GCNGC	3 cut(s)	312, 431, 1791
GsaI	CCCAGC	1 cut(s)	731
HaeIII	GGCC	4 cut(s)	576, 1443, 1607, 1799
HapII	CCGG	3 cut(s)	896, 1505, 1751
HgaI	GACGC	1 cut(s)	59
HhaI	GCGC	2 cut(s)	327, 329
Hin1II	CATG	9 cut(s)	127, 216, 355, 483, 725, 1369, 1580, 1670, 1798
Hin6I	GCGC	2 cut(s)	325, 327
HinP1I	GCGC	2 cut(s)	325, 327
HincII	GTYRAC	3 cut(s)	1479, 1630, 1736
HindII	GTYRAC	3 cut(s)	1479, 1630, 1736
HindIII	AAGCTT	2 cut(s)	783, 1181
HinfI	GANTC	2 cut(s)	938, 1661
HpaII	CCGG	3 cut(s)	896, 1505, 1751
HphI	GGTGA	4 cut(s)	59, 629, 1249, 1519
Hpy166II	GTNNAC	6 cut(s)	158, 292, 1205, 1479, 1630, 1736
Hpy188I	TCNGA	5 cut(s)	145, 258, 1165, 1233, 1500
Hpy188III	TCNNGA	7 cut(s)	352, 399, 830, 843, 869, 935, 1213
Hpy8I	GTNNAC	6 cut(s)	158, 292, 1205, 1479, 1630, 1736
HpyAV	CCTTC	5 cut(s)	263, 1556, 1583, 1612, 1804
HpyCH4III	ACNGT	3 cut(s)	541, 1093, 1696
HpyCH4IV	ACGT	3 cut(s)	177, 1052, 1614
HpyCH4V	TGCA	9 cut(s)	16, 92, 127, 224, 813, 825, 1150, 1333, 1365
HpyF10VI	GCNNNNNNNGC	2 cut(s)	89, 1796
HpyF3I	CTNAG	4 cut(s)	229, 1019, 1184, 1376
HpySE526I	ACGT	3 cut(s)	177, 1052, 1614
Hsp92II	CATG	9 cut(s)	127, 216, 355, 483, 725, 1369, 1580, 1670, 1798
HspAI	GCGC	2 cut(s)	325, 327
KpnI	GGTACC	1 cut(s)	781
LguI	GCTCTTC	1 cut(s)	321
LmnI	GCTCC	2 cut(s)	566, 1753
Lsp1109I	GCAGC	3 cut(s)	298, 442, 1802
LweI	GCATC	3 cut(s)	465, 1285, 1765
MaeI	CTAG	4 cut(s)	399, 533, 843, 869
MaeII	ACGT	3 cut(s)	177, 1052, 1614
MaeIII	GTNAC	6 cut(s)	47, 331, 535, 953, 1022, 1490
MboII	GAAGA	7 cut(s)	308, 538, 591, 593, 636, 994, 1185
MfeI	CAATTG	1 cut(s)	495
MflI	RGATCY	3 cut(s)	19, 678, 984
MlsI	TGGCCA	1 cut(s)	1607
MluNI	TGGCCA	1 cut(s)	1607
MmeI	TCCRAC	2 cut(s)	265, 1771
Mox20I	TGGCCA	1 cut(s)	1607
MroXI	GAANNNNTTC	1 cut(s)	359
MscI	TGGCCA	1 cut(s)	1607
MslI	CAYNNNNRTG	2 cut(s)	153, 1000
Msp20I	TGGCCA	1 cut(s)	1607
MspCI	CTTAAG	2 cut(s)	455, 1826
MspI	CCGG	3 cut(s)	896, 1505, 1751
MspR9I	CCNGG	3 cut(s)	190, 1398, 1440
MunI	CAATTG	1 cut(s)	495
Mva1269I	GAATGC	1 cut(s)	815
MvaI	CCWGG	3 cut(s)	190, 1398, 1440
MvnI	CGCG	1 cut(s)	327
MwoI	GCNNNNNNNGC	2 cut(s)	89, 1796
NcoI	CCATGG	2 cut(s)	479, 1794
NdeI	CATATG	1 cut(s)	107
NlaIII	CATG	9 cut(s)	127, 216, 355, 483, 725, 1369, 1580, 1670, 1798
NlaIV	GGNNCC	5 cut(s)	187, 452, 680, 779, 1800
NmuCI	GTSAC	4 cut(s)	47, 331, 535, 1490
PagI	TCATGA	1 cut(s)	351
PauI	GCGCGC	1 cut(s)	325
PciSI	GCTCTTC	1 cut(s)	321
PcsI	WCGNNNNNNNCGW	1 cut(s)	1257
PctI	GAATGC	1 cut(s)	815
PdmI	GAANNNNTTC	1 cut(s)	359
PfeI	GAWTC	2 cut(s)	938, 1661
PflMI	CCANNNNNTGG	2 cut(s)	68, 447
PkrI	GCNGC	3 cut(s)	313, 432, 1792
Ppu21I	YACGTR	1 cut(s)	1053
PshBI	ATTAAT	2 cut(s)	87, 264
Psp6I	CCWGG	3 cut(s)	188, 1396, 1438
PspFI	CCCAGC	1 cut(s)	727
PspGI	CCWGG	3 cut(s)	188, 1396, 1438
PspN4I	GGNNCC	5 cut(s)	187, 452, 680, 779, 1800
PspPI	GGNCC	2 cut(s)	1744, 1798
PsrI	GAACNNNNNNTAC	7 cut(s)	150, 178, 182, 210, 1758, 1790, 1815
PsuI	RGATCY	3 cut(s)	19, 678, 984
PteI	GCGCGC	1 cut(s)	325
RsaI	GTAC	9 cut(s)	180, 779, 802, 1051, 1131, 1206, 1686, 1767, 1824
RsaNI	GTAC	9 cut(s)	179, 778, 801, 1050, 1130, 1205, 1685, 1766, 1823
RseI	CAYNNNNRTG	2 cut(s)	153, 1000
SalI	GTCGAC	1 cut(s)	1628
SapI	GCTCTTC	1 cut(s)	321
SatI	GCNGC	3 cut(s)	312, 431, 1791
Sau96I	GGNCC	2 cut(s)	1744, 1798
ScaI	AGTACT	3 cut(s)	1686, 1767, 1824
ScrFI	CCNGG	3 cut(s)	190, 1398, 1440
SfaNI	GCATC	3 cut(s)	465, 1285, 1765
SinI	GGWCC	1 cut(s)	1744
SmiMI	CAYNNNNRTG	2 cut(s)	153, 1000
SmlI	CTYRAG	2 cut(s)	455, 1826
SmoI	CTYRAG	2 cut(s)	455, 1826
SnaBI	TACGTA	1 cut(s)	1053
SsiI	CCGC	3 cut(s)	66, 509, 909
SspI	AATATT	2 cut(s)	614, 930
SspMI	CTAG	4 cut(s)	399, 533, 843, 869
StyD4I	CCNGG	3 cut(s)	188, 1396, 1438
StyI	CCWWGG	4 cut(s)	479, 682, 1608, 1794
TaaI	ACNGT	3 cut(s)	541, 1093, 1696
TaiI	ACGT	3 cut(s)	180, 1055, 1617
TaqI	TCGA	8 cut(s)	384, 410, 469, 488, 1190, 1428, 1629, 1834
TaqII	GACCGA	1 cut(s)	1393
TatI	WGTACW	6 cut(s)	800, 1129, 1204, 1684, 1765, 1822
TfiI	GAWTC	2 cut(s)	938, 1661
TscAI	CASTG	1 cut(s)	340
TseFI	GTSAC	4 cut(s)	47, 331, 535, 1490
TseI	GCWGC	3 cut(s)	311, 430, 1790
Tsp45I	GTSAC	4 cut(s)	47, 331, 535, 1490
TspGWI	ACGGA	1 cut(s)	143
TspRI	CASTG	1 cut(s)	340
Van91I	CCANNNNNTGG	2 cut(s)	68, 447
Vha464I	CTTAAG	2 cut(s)	455, 1826
VpaK11BI	GGWCC	1 cut(s)	1744
VspI	ATTAAT	2 cut(s)	87, 264
XapI	RAATTY	6 cut(s)	298, 624, 653, 875, 970, 1703
XbaI	TCTAGA	3 cut(s)	398, 842, 868
XcmI	CCANNNNNNNNNTGG	1 cut(s)	724
XmiI	GTMKAC	1 cut(s)	1629
XmnI	GAANNNNTTC	1 cut(s)	359
XspI	CTAG	4 cut(s)	399, 533, 843, 869
ZrmI	AGTACT	3 cut(s)	1686, 1767, 1824

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.