Protein TRANSPARENT TESTA
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G13290 |
| fragaria_vesca | FvH4_4g28010 |
| malus_domestica | MD13G1045800.v1.1 MD16G1047400.v1.1 |
| prunus_persica | Prupe.1G306200_v2.0.a1 |
| pyrus_communis | pycom16g04140 |
| rosa_chinensis | RchiOBHm_Chr4g0435741 |
| rosa_laevigata | RLG00000006563 |
| rosa_multiflora | Rmu_co8077120.1_g000001 Rmu_sc0000051.1_g000019 |
| rosa_roxburghii | Rroxscaffold_5G00376930 |
| rosa_rugosa | Rorug04G0289200 |
| rosa_samantha | Rh4AG343500 Rh4BG352200 Rh4CG366700 Rh4DG346100 |
| rosa_wichuraiana | Rw4G029990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 49 |
| AgsI | TTSAA | 3 cut(s) | 23, 125, 144 |
| AjnI | CCWGG | 1 cut(s) | 173 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 27, 59, 59, 91 |
| AluBI | AGCT | 1 cut(s) | 49 |
| AluI | AGCT | 1 cut(s) | 49 |
| AlwI | GGATC | 1 cut(s) | 49 |
| ApeKI | GCWGC | 1 cut(s) | 82 |
| AsuHPI | GGTGA | 1 cut(s) | 143 |
| BbvI | GCAGC | 1 cut(s) | 69 |
| BciT130I | CCWGG | 1 cut(s) | 175 |
| BfaI | CTAG | 1 cut(s) | 50 |
| BisI | GCNGC | 1 cut(s) | 83 |
| BlsI | GCNGC | 1 cut(s) | 84 |
| Bme1390I | CCNGG | 1 cut(s) | 175 |
| BmrFI | CCNGG | 1 cut(s) | 175 |
| BmrI | ACTGGG | 1 cut(s) | 79 |
| BmsI | GCATC | 1 cut(s) | 160 |
| BmuI | ACTGGG | 1 cut(s) | 79 |
| BpmI | CTGGAG | 1 cut(s) | 196 |
| Bpu10I | CCTNAGC | 1 cut(s) | 5 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 186, 216 |
| Bse1I | ACTGG | 1 cut(s) | 74 |
| BseBI | CCWGG | 1 cut(s) | 175 |
| BseGI | GGATG | 1 cut(s) | 101 |
| BseMII | CTCAG | 2 cut(s) | 19, 100 |
| BseNI | ACTGG | 1 cut(s) | 74 |
| BseXI | GCAGC | 1 cut(s) | 69 |
| Bsp143I | GATC | 1 cut(s) | 54 |
| BspCNI | CTCAG | 2 cut(s) | 18, 99 |
| BspPI | GGATC | 1 cut(s) | 49 |
| BsrI | ACTGG | 1 cut(s) | 74 |
| BssMI | GATC | 1 cut(s) | 54 |
| Bst2UI | CCWGG | 1 cut(s) | 175 |
| Bst4CI | ACNGT | 1 cut(s) | 278 |
| BstDEI | CTNAG | 2 cut(s) | 5, 86 |
| BstEII | GGTNACC | 1 cut(s) | 26 |
| BstF5I | GGATG | 1 cut(s) | 101 |
| BstKTI | GATC | 1 cut(s) | 57 |
| BstMBI | GATC | 1 cut(s) | 54 |
| BstNI | CCWGG | 1 cut(s) | 175 |
| BstPI | GGTNACC | 1 cut(s) | 26 |
| BstSCI | CCNGG | 1 cut(s) | 173 |
| BstV1I | GCAGC | 1 cut(s) | 69 |
| BtsCI | GGATG | 1 cut(s) | 101 |
| CviAII | CATG | 3 cut(s) | 79, 154, 244 |
| CviJI | RGCY | 3 cut(s) | 49, 75, 111 |
| CviKI_1 | RGCY | 3 cut(s) | 49, 75, 111 |
| DdeI | CTNAG | 2 cut(s) | 5, 86 |
| DpnI | GATC | 1 cut(s) | 56 |
| DpnII | GATC | 1 cut(s) | 54 |
| Eco91I | GGTNACC | 1 cut(s) | 26 |
| EcoO65I | GGTNACC | 1 cut(s) | 26 |
| EcoRII | CCWGG | 1 cut(s) | 173 |
| FaeI | CATG | 3 cut(s) | 82, 157, 247 |
| FaiI | YATR | 4 cut(s) | 80, 155, 161, 245 |
| FatI | CATG | 3 cut(s) | 78, 153, 243 |
| Fnu4HI | GCNGC | 1 cut(s) | 83 |
| FokI | GGATG | 1 cut(s) | 108 |
| Fsp4HI | GCNGC | 1 cut(s) | 83 |
| FspBI | CTAG | 1 cut(s) | 50 |
| GluI | GCNGC | 1 cut(s) | 83 |
| GsuI | CTGGAG | 1 cut(s) | 196 |
| Hin1II | CATG | 3 cut(s) | 82, 157, 247 |
| HphI | GGTGA | 1 cut(s) | 143 |
| Hpy166II | GTNNAC | 1 cut(s) | 274 |
| Hpy188I | TCNGA | 1 cut(s) | 16 |
| Hpy188III | TCNNGA | 2 cut(s) | 7, 215 |
| Hpy8I | GTNNAC | 1 cut(s) | 274 |
| HpyAV | CCTTC | 1 cut(s) | 185 |
| HpyCH4III | ACNGT | 1 cut(s) | 278 |
| HpyF3I | CTNAG | 2 cut(s) | 5, 86 |
| Hsp92II | CATG | 3 cut(s) | 82, 157, 247 |
| Kzo9I | GATC | 1 cut(s) | 54 |
| LpnPI | CCDG | 4 cut(s) | 55, 101, 160, 187 |
| Lsp1109I | GCAGC | 1 cut(s) | 69 |
| LweI | GCATC | 1 cut(s) | 160 |
| MaeI | CTAG | 1 cut(s) | 50 |
| MaeIII | GTNAC | 1 cut(s) | 26 |
| MalI | GATC | 1 cut(s) | 56 |
| MboI | GATC | 1 cut(s) | 54 |
| MboII | GAAGA | 1 cut(s) | 114 |
| MluCI | AATT | 2 cut(s) | 165, 248 |
| MmeI | TCCRAC | 1 cut(s) | 90 |
| MnlI | CCTC | 4 cut(s) | 68, 175, 190, 262 |
| MspR9I | CCNGG | 1 cut(s) | 175 |
| MvaI | CCWGG | 1 cut(s) | 175 |
| NdeII | GATC | 1 cut(s) | 54 |
| NlaIII | CATG | 3 cut(s) | 82, 157, 247 |
| PkrI | GCNGC | 1 cut(s) | 84 |
| Psp6I | CCWGG | 1 cut(s) | 173 |
| PspEI | GGTNACC | 1 cut(s) | 26 |
| PspGI | CCWGG | 1 cut(s) | 173 |
| SatI | GCNGC | 1 cut(s) | 83 |
| Sau3AI | GATC | 1 cut(s) | 54 |
| ScrFI | CCNGG | 1 cut(s) | 175 |
| SetI | ASST | 7 cut(s) | 28, 51, 120, 149, 186, 236, 273 |
| SfaNI | GCATC | 1 cut(s) | 160 |
| Sse9I | AATT | 2 cut(s) | 165, 248 |
| SspMI | CTAG | 1 cut(s) | 50 |
| StyD4I | CCNGG | 1 cut(s) | 173 |
| TaaI | ACNGT | 1 cut(s) | 278 |
| TasI | AATT | 2 cut(s) | 165, 248 |
| TseI | GCWGC | 1 cut(s) | 82 |
| TspDTI | ATGAA | 3 cut(s) | 67, 204, 260 |
| XspI | CTAG | 1 cut(s) | 50 |