Early nodulin-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g01050 |
| malus_domestica | MD05G1357200.v1.1 |
| prunus_persica | Prupe.4G011400_v2.0.a1 |
| pyrus_communis | pycom10g28040 |
| rosa_chinensis | RchiOBHm_Chr5g0001591 |
| rosa_laevigata | RLG00000030945 |
| rosa_multiflora | Rmu_sc0041139.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00074730 |
| rosa_rugosa | Rorug04G0391200 |
| rosa_samantha | Rh5AG012600 Rh5BG015500 Rh5CG013600 Rh5DG013400 |
| rosa_wichuraiana | Rw5G001210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 804 |
| AccII | CGCG | 3 cut(s) | 346, 1245, 1264 |
| AciI | CCGC | 2 cut(s) | 201, 1262 |
| AclWI | GGATC | 6 cut(s) | 373, 742, 983, 996, 1091, 1170 |
| AcsI | RAATTY | 3 cut(s) | 430, 852, 954 |
| AfaI | GTAC | 1 cut(s) | 1253 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 843, 1111 |
| AgsI | TTSAA | 8 cut(s) | 166, 223, 271, 304, 643, 698, 744, 1037 |
| AhlI | ACTAGT | 1 cut(s) | 71 |
| AjnI | CCWGG | 2 cut(s) | 615, 1291 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 812, 844 |
| AluBI | AGCT | 9 cut(s) | 162, 219, 515, 610, 685, 755, 841, 896, 1214 |
| AluI | AGCT | 9 cut(s) | 162, 219, 515, 610, 685, 755, 841, 896, 1214 |
| Alw21I | GWGCWC | 1 cut(s) | 332 |
| Alw26I | GTCTC | 2 cut(s) | 99, 779 |
| AlwI | GGATC | 6 cut(s) | 373, 742, 983, 996, 1091, 1170 |
| Ama87I | CYCGRG | 1 cut(s) | 624 |
| AoxI | GGCC | 3 cut(s) | 184, 1140, 1259 |
| ApeKI | GCWGC | 5 cut(s) | 131, 240, 715, 833, 1211 |
| ApoI | RAATTY | 3 cut(s) | 430, 852, 954 |
| AspLEI | GCGC | 2 cut(s) | 245, 567 |
| AspS9I | GGNCC | 2 cut(s) | 613, 1141 |
| AsuHPI | GGTGA | 2 cut(s) | 548, 1229 |
| AsuNHI | GCTAGC | 1 cut(s) | 158 |
| AvaI | CYCGRG | 1 cut(s) | 624 |
| AvaII | GGWCC | 1 cut(s) | 613 |
| BamHI | GGATCC | 1 cut(s) | 988 |
| BbsI | GAAGAC | 2 cut(s) | 179, 732 |
| Bbv12I | GWGCWC | 1 cut(s) | 332 |
| BbvCI | CCTCAGC | 2 cut(s) | 690, 1125 |
| BbvI | GCAGC | 5 cut(s) | 143, 227, 727, 845, 1223 |
| BccI | CCATC | 2 cut(s) | 1012, 1198 |
| BciT130I | CCWGG | 2 cut(s) | 617, 1293 |
| BclI | TGATCA | 1 cut(s) | 451 |
| BcoDI | GTCTC | 2 cut(s) | 99, 779 |
| BcuI | ACTAGT | 1 cut(s) | 71 |
| BfaI | CTAG | 3 cut(s) | 72, 159, 711 |
| BfmI | CTRYAG | 2 cut(s) | 797, 964 |
| BfuAI | ACCTGC | 1 cut(s) | 804 |
| BisI | GCNGC | 6 cut(s) | 132, 241, 716, 834, 1212, 1262 |
| BlsI | GCNGC | 6 cut(s) | 133, 242, 717, 835, 1213, 1263 |
| Bme1390I | CCNGG | 2 cut(s) | 617, 1293 |
| Bme18I | GGWCC | 1 cut(s) | 613 |
| BmeT110I | CYCGRG | 1 cut(s) | 624 |
| BmgT120I | GGNCC | 2 cut(s) | 613, 1141 |
| BmiI | GGNNCC | 3 cut(s) | 990, 1143, 1290 |
| BmrFI | CCNGG | 2 cut(s) | 617, 1293 |
| BmrI | ACTGGG | 1 cut(s) | 139 |
| BmsI | GCATC | 5 cut(s) | 244, 451, 541, 1198, 1291 |
| BmtI | GCTAGC | 1 cut(s) | 162 |
| BmuI | ACTGGG | 1 cut(s) | 139 |
| BpiI | GAAGAC | 2 cut(s) | 179, 732 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 739, 771 |
| BpmI | CTGGAG | 1 cut(s) | 884 |
| Bpu10I | CCTNAGC | 2 cut(s) | 690, 1125 |
| BpuEI | CTTGAG | 2 cut(s) | 741, 1014 |
| Bsa29I | ATCGAT | 1 cut(s) | 1165 |
| BsaI | GGTCTC | 1 cut(s) | 99 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 857, 887 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 843, 1111 |
| Bse1I | ACTGG | 4 cut(s) | 145, 631, 867, 992 |
| Bse3DI | GCAATG | 1 cut(s) | 660 |
| BseBI | CCWGG | 2 cut(s) | 617, 1293 |
| BseCI | ATCGAT | 1 cut(s) | 1165 |
| BseGI | GGATG | 7 cut(s) | 556, 853, 1023, 1174, 1209, 1213, 1224 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 843, 1111 |
| BseMI | GCAATG | 1 cut(s) | 660 |
| BseMII | CTCAG | 6 cut(s) | 110, 317, 573, 665, 681, 1116 |
| BseNI | ACTGG | 4 cut(s) | 145, 631, 867, 992 |
| BseRI | GAGGAG | 4 cut(s) | 36, 397, 1142, 1301 |
| BseXI | GCAGC | 5 cut(s) | 143, 227, 727, 845, 1223 |
| BseYI | CCCAGC | 1 cut(s) | 515 |
| Bsh1236I | CGCG | 3 cut(s) | 346, 1245, 1264 |
| BshFI | GGCC | 3 cut(s) | 186, 1142, 1261 |
| BshVI | ATCGAT | 1 cut(s) | 1165 |
| BsiHKAI | GWGCWC | 1 cut(s) | 332 |
| BsiHKCI | CYCGRG | 1 cut(s) | 624 |
| BslFI | GGGAC | 2 cut(s) | 164, 948 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 843, 1111 |
| BsmAI | GTCTC | 2 cut(s) | 99, 779 |
| BsmFI | GGGAC | 2 cut(s) | 164, 948 |
| BsnI | GGCC | 3 cut(s) | 186, 1142, 1261 |
| Bso31I | GGTCTC | 1 cut(s) | 99 |
| BsoBI | CYCGRG | 1 cut(s) | 624 |
| Bsp1286I | GDGCHC | 1 cut(s) | 332 |
| Bsp143I | GATC | 8 cut(s) | 365, 451, 538, 734, 988, 1096, 1162, 1171 |
| BspACI | CCGC | 2 cut(s) | 201, 1262 |
| BspANI | GGCC | 3 cut(s) | 186, 1142, 1261 |
| BspCNI | CTCAG | 6 cut(s) | 109, 318, 572, 666, 682, 1117 |
| BspDI | ATCGAT | 1 cut(s) | 1165 |
| BspFNI | CGCG | 3 cut(s) | 346, 1245, 1264 |
| BspLI | GGNNCC | 3 cut(s) | 990, 1143, 1290 |
| BspMAI | CTGCAG | 1 cut(s) | 801 |
| BspMI | ACCTGC | 1 cut(s) | 804 |
| BspOI | GCTAGC | 1 cut(s) | 162 |
| BspPI | GGATC | 6 cut(s) | 373, 742, 983, 996, 1091, 1170 |
| BspTNI | GGTCTC | 1 cut(s) | 99 |
| BsrDI | GCAATG | 1 cut(s) | 660 |
| BsrI | ACTGG | 4 cut(s) | 145, 631, 867, 992 |
| BssMI | GATC | 8 cut(s) | 365, 451, 538, 734, 988, 1096, 1162, 1171 |
| Bst2UI | CCWGG | 2 cut(s) | 617, 1293 |
| Bst4CI | ACNGT | 2 cut(s) | 85, 109 |
| Bst6I | CTCTTC | 2 cut(s) | 54, 645 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 209, 707 |
| BstC8I | GCNNGC | 2 cut(s) | 160, 687 |
| BstDEI | CTNAG | 7 cut(s) | 96, 326, 559, 674, 690, 1125, 1305 |
| BstEII | GGTNACC | 1 cut(s) | 473 |
| BstF5I | GGATG | 7 cut(s) | 556, 853, 1023, 1174, 1209, 1213, 1224 |
| BstFNI | CGCG | 3 cut(s) | 346, 1245, 1264 |
| BstHHI | GCGC | 2 cut(s) | 245, 567 |
| BstKTI | GATC | 8 cut(s) | 368, 454, 541, 737, 991, 1099, 1165, 1174 |
| BstMAI | GTCTC | 2 cut(s) | 99, 779 |
| BstMBI | GATC | 8 cut(s) | 365, 451, 538, 734, 988, 1096, 1162, 1171 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 200, 209, 263, 707, 833, 887, 1121 |
| BstNI | CCWGG | 2 cut(s) | 617, 1293 |
| BstPI | GGTNACC | 1 cut(s) | 473 |
| BstSCI | CCNGG | 2 cut(s) | 615, 1291 |
| BstSFI | CTRYAG | 2 cut(s) | 797, 964 |
| BstUI | CGCG | 3 cut(s) | 346, 1245, 1264 |
| BstV1I | GCAGC | 5 cut(s) | 143, 227, 727, 845, 1223 |
| BstV2I | GAAGAC | 2 cut(s) | 179, 732 |
| BstX2I | RGATCY | 2 cut(s) | 988, 1096 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 898, 1108 |
| BstYI | RGATCY | 2 cut(s) | 988, 1096 |
| Bsu15I | ATCGAT | 1 cut(s) | 1165 |
| BsuRI | GGCC | 3 cut(s) | 186, 1142, 1261 |
| BsuTUI | ATCGAT | 1 cut(s) | 1165 |
| BtsCI | GGATG | 7 cut(s) | 556, 853, 1023, 1174, 1209, 1213, 1224 |
| BtsI | GCAGTG | 1 cut(s) | 574 |
| BtsIMutI | CAGTG | 6 cut(s) | 81, 152, 323, 452, 574, 999 |
| BveI | ACCTGC | 1 cut(s) | 804 |
| Cac8I | GCNNGC | 2 cut(s) | 160, 687 |
| CfoI | GCGC | 2 cut(s) | 245, 567 |
| Cfr13I | GGNCC | 2 cut(s) | 613, 1141 |
| ClaI | ATCGAT | 1 cut(s) | 1165 |
| CseI | GACGC | 1 cut(s) | 184 |
| Csp6I | GTAC | 1 cut(s) | 1252 |
| CviAII | CATG | 6 cut(s) | 378, 436, 905, 1014, 1091, 1268 |
| CviQI | GTAC | 1 cut(s) | 1252 |
| DdeI | CTNAG | 7 cut(s) | 96, 326, 559, 674, 690, 1125, 1305 |
| DpnI | GATC | 8 cut(s) | 367, 453, 540, 736, 990, 1098, 1164, 1173 |
| DpnII | GATC | 8 cut(s) | 365, 451, 538, 734, 988, 1096, 1162, 1171 |
| DraI | TTTAAA | 1 cut(s) | 529 |
| Eam1104I | CTCTTC | 2 cut(s) | 54, 645 |
| EarI | CTCTTC | 2 cut(s) | 54, 645 |
| Eco31I | GGTCTC | 1 cut(s) | 99 |
| Eco32I | GATATC | 1 cut(s) | 115 |
| Eco47I | GGWCC | 1 cut(s) | 613 |
| Eco88I | CYCGRG | 1 cut(s) | 624 |
| Eco91I | GGTNACC | 1 cut(s) | 473 |
| EcoO65I | GGTNACC | 1 cut(s) | 473 |
| EcoRII | CCWGG | 2 cut(s) | 615, 1291 |
| EcoRV | GATATC | 1 cut(s) | 115 |
| EcoT22I | ATGCAT | 2 cut(s) | 640, 829 |
| FaeI | CATG | 6 cut(s) | 381, 439, 908, 1017, 1094, 1271 |
| FaqI | GGGAC | 2 cut(s) | 164, 948 |
| FatI | CATG | 6 cut(s) | 377, 435, 904, 1013, 1090, 1267 |
| FauNDI | CATATG | 1 cut(s) | 483 |
| FbaI | TGATCA | 1 cut(s) | 451 |
| Fnu4HI | GCNGC | 6 cut(s) | 132, 241, 716, 834, 1212, 1262 |
| FokI | GGATG | 7 cut(s) | 563, 860, 1030, 1161, 1211, 1216, 1220 |
| Fsp4HI | GCNGC | 6 cut(s) | 132, 241, 716, 834, 1212, 1262 |
| FspBI | CTAG | 3 cut(s) | 72, 159, 711 |
| GlaI | GCGC | 2 cut(s) | 244, 566 |
| GluI | GCNGC | 6 cut(s) | 132, 241, 716, 834, 1212, 1262 |
| GsaI | CCCAGC | 1 cut(s) | 519 |
| GsuI | CTGGAG | 1 cut(s) | 884 |
| HaeIII | GGCC | 3 cut(s) | 186, 1142, 1261 |
| HgaI | GACGC | 1 cut(s) | 184 |
| HhaI | GCGC | 2 cut(s) | 245, 567 |
| Hin1II | CATG | 6 cut(s) | 381, 439, 908, 1017, 1094, 1271 |
| Hin6I | GCGC | 2 cut(s) | 243, 565 |
| HinP1I | GCGC | 2 cut(s) | 243, 565 |
| HindIII | AAGCTT | 1 cut(s) | 894 |
| HinfI | GANTC | 6 cut(s) | 276, 627, 872, 1004, 1132, 1167 |
| HphI | GGTGA | 2 cut(s) | 548, 1229 |
| Hpy166II | GTNNAC | 2 cut(s) | 20, 124 |
| Hpy188I | TCNGA | 3 cut(s) | 99, 550, 562 |
| Hpy188III | TCNNGA | 2 cut(s) | 466, 758 |
| Hpy8I | GTNNAC | 2 cut(s) | 20, 124 |
| Hpy99I | CGWCG | 1 cut(s) | 346 |
| HpyAV | CCTTC | 4 cut(s) | 22, 384, 1115, 1198 |
| HpyCH4III | ACNGT | 2 cut(s) | 85, 109 |
| HpyCH4IV | ACGT | 3 cut(s) | 180, 341, 645 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 200, 209, 263, 707, 833, 887, 1121 |
| HpyF3I | CTNAG | 7 cut(s) | 96, 326, 559, 674, 690, 1125, 1305 |
| HpySE526I | ACGT | 3 cut(s) | 180, 341, 645 |
| Hsp92II | CATG | 6 cut(s) | 381, 439, 908, 1017, 1094, 1271 |
| HspAI | GCGC | 2 cut(s) | 243, 565 |
| Ksp22I | TGATCA | 1 cut(s) | 451 |
| Kzo9I | GATC | 8 cut(s) | 365, 451, 538, 734, 988, 1096, 1162, 1171 |
| LmnI | GCTCC | 2 cut(s) | 216, 1288 |
| Lsp1109I | GCAGC | 5 cut(s) | 143, 227, 727, 845, 1223 |
| LweI | GCATC | 5 cut(s) | 244, 451, 541, 1198, 1291 |
| MaeI | CTAG | 3 cut(s) | 72, 159, 711 |
| MaeII | ACGT | 3 cut(s) | 180, 341, 645 |
| MaeIII | GTNAC | 3 cut(s) | 321, 473, 1044 |
| MalI | GATC | 8 cut(s) | 367, 453, 540, 736, 990, 1098, 1164, 1173 |
| MboI | GATC | 8 cut(s) | 365, 451, 538, 734, 988, 1096, 1162, 1171 |
| MboII | GAAGA | 6 cut(s) | 41, 184, 592, 595, 662, 732 |
| MfeI | CAATTG | 1 cut(s) | 807 |
| MflI | RGATCY | 2 cut(s) | 988, 1096 |
| MhlI | GDGCHC | 1 cut(s) | 332 |
| MluCI | AATT | 8 cut(s) | 10, 32, 229, 430, 807, 820, 852, 954 |
| MlyI | GAGTC | 3 cut(s) | 285, 636, 881 |
| MmeI | TCCRAC | 1 cut(s) | 528 |
| Mph1103I | ATGCAT | 2 cut(s) | 640, 829 |
| MseI | TTAA | 1 cut(s) | 528 |
| MslI | CAYNNNNRTG | 2 cut(s) | 447, 909 |
| MspA1I | CMGCKG | 2 cut(s) | 610, 1214 |
| MspR9I | CCNGG | 2 cut(s) | 617, 1293 |
| MunI | CAATTG | 1 cut(s) | 807 |
| MvaI | CCWGG | 2 cut(s) | 617, 1293 |
| MvnI | CGCG | 3 cut(s) | 346, 1245, 1264 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 200, 209, 263, 707, 833, 887, 1121 |
| NdeI | CATATG | 1 cut(s) | 483 |
| NdeII | GATC | 8 cut(s) | 365, 451, 538, 734, 988, 1096, 1162, 1171 |
| NheI | GCTAGC | 1 cut(s) | 158 |
| NlaIII | CATG | 6 cut(s) | 381, 439, 908, 1017, 1094, 1271 |
| NlaIV | GGNNCC | 3 cut(s) | 990, 1143, 1290 |
| NmuCI | GTSAC | 2 cut(s) | 321, 1044 |
| NsiI | ATGCAT | 2 cut(s) | 640, 829 |
| PaeR7I | CTCGAG | 1 cut(s) | 624 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 132, 186 |
| PfeI | GAWTC | 3 cut(s) | 1004, 1132, 1167 |
| PkrI | GCNGC | 6 cut(s) | 133, 242, 717, 835, 1213, 1263 |
| PleI | GAGTC | 3 cut(s) | 284, 635, 880 |
| PpsI | GAGTC | 3 cut(s) | 284, 635, 880 |
| Psp6I | CCWGG | 2 cut(s) | 615, 1291 |
| PspEI | GGTNACC | 1 cut(s) | 473 |
| PspFI | CCCAGC | 1 cut(s) | 515 |
| PspGI | CCWGG | 2 cut(s) | 615, 1291 |
| PspN4I | GGNNCC | 3 cut(s) | 990, 1143, 1290 |
| PspPI | GGNCC | 2 cut(s) | 613, 1141 |
| PspXI | VCTCGAGB | 1 cut(s) | 624 |
| PstI | CTGCAG | 1 cut(s) | 801 |
| PsuI | RGATCY | 2 cut(s) | 988, 1096 |
| PvuII | CAGCTG | 2 cut(s) | 610, 1214 |
| RsaI | GTAC | 1 cut(s) | 1253 |
| RsaNI | GTAC | 1 cut(s) | 1252 |
| RseI | CAYNNNNRTG | 2 cut(s) | 447, 909 |
| SaqAI | TTAA | 1 cut(s) | 528 |
| SatI | GCNGC | 6 cut(s) | 132, 241, 716, 834, 1212, 1262 |
| Sau3AI | GATC | 8 cut(s) | 365, 451, 538, 734, 988, 1096, 1162, 1171 |
| Sau96I | GGNCC | 2 cut(s) | 613, 1141 |
| SbfI | CCTGCAGG | 1 cut(s) | 801 |
| SchI | GAGTC | 3 cut(s) | 285, 636, 881 |
| ScrFI | CCNGG | 2 cut(s) | 617, 1293 |
| SdaI | CCTGCAGG | 1 cut(s) | 801 |
| SduI | GDGCHC | 1 cut(s) | 332 |
| SfaNI | GCATC | 5 cut(s) | 244, 451, 541, 1198, 1291 |
| SfcI | CTRYAG | 2 cut(s) | 797, 964 |
| Sfr274I | CTCGAG | 1 cut(s) | 624 |
| SinI | GGWCC | 1 cut(s) | 613 |
| SlaI | CTCGAG | 1 cut(s) | 624 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 447, 909 |
| SmlI | CTYRAG | 3 cut(s) | 624, 756, 1029 |
| SmoI | CTYRAG | 3 cut(s) | 624, 756, 1029 |
| SpeI | ACTAGT | 1 cut(s) | 71 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 801 |
| Sse9I | AATT | 8 cut(s) | 10, 32, 229, 430, 807, 820, 852, 954 |
| SsiI | CCGC | 2 cut(s) | 201, 1262 |
| SspMI | CTAG | 3 cut(s) | 72, 159, 711 |
| StyD4I | CCNGG | 2 cut(s) | 615, 1291 |
| TaaI | ACNGT | 2 cut(s) | 85, 109 |
| TaiI | ACGT | 3 cut(s) | 183, 344, 648 |
| TaqI | TCGA | 5 cut(s) | 6, 625, 1165, 1170, 1281 |
| TasI | AATT | 8 cut(s) | 10, 32, 229, 430, 807, 820, 852, 954 |
| TatI | WGTACW | 1 cut(s) | 1251 |
| TauI | GCSGC | 1 cut(s) | 1264 |
| TfiI | GAWTC | 3 cut(s) | 1004, 1132, 1167 |
| Tru1I | TTAA | 1 cut(s) | 528 |
| Tru9I | TTAA | 1 cut(s) | 528 |
| TscAI | CASTG | 6 cut(s) | 88, 152, 330, 452, 574, 999 |
| TseFI | GTSAC | 2 cut(s) | 321, 1044 |
| TseI | GCWGC | 5 cut(s) | 131, 240, 715, 833, 1211 |
| Tsp45I | GTSAC | 2 cut(s) | 321, 1044 |
| TspDTI | ATGAA | 9 cut(s) | 366, 424, 864, 912, 921, 1002, 1079, 1213, 1284 |
| TspRI | CASTG | 6 cut(s) | 88, 152, 330, 452, 574, 999 |
| VpaK11BI | GGWCC | 1 cut(s) | 613 |
| XapI | RAATTY | 3 cut(s) | 430, 852, 954 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1108 |
| XhoI | CTCGAG | 1 cut(s) | 624 |
| XspI | CTAG | 3 cut(s) | 72, 159, 711 |
| Zsp2I | ATGCAT | 2 cut(s) | 640, 829 |