Rhamnogalacturonate lyase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g01850 |
| malus_domestica | MD10G1323400.v1.1 |
| prunus_persica | Prupe.4G018900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0002721 |
| rosa_laevigata | RLG00000031054 |
| rosa_multiflora | Rmu_sc0018891.1_g000001 Rmu_sc0018892.1_g000001 Rmu_sc0037618.1_g000002 Rmu_sc0041618.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00073160 |
| rosa_rugosa | Rorug04G0398700 |
| rosa_samantha | Rh5AG021900 Rh5BG024800 Rh5CG024200 Rh5DG023200 |
| rosa_wichuraiana | Rw5G002040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 5 |
| AfaI | GTAC | 2 cut(s) | 109, 201 |
| ApeKI | GCWGC | 1 cut(s) | 69 |
| BbvI | GCAGC | 1 cut(s) | 81 |
| BisI | GCNGC | 1 cut(s) | 70 |
| BlsI | GCNGC | 1 cut(s) | 71 |
| Bse1I | ACTGG | 1 cut(s) | 168 |
| BseNI | ACTGG | 1 cut(s) | 168 |
| BseXI | GCAGC | 1 cut(s) | 81 |
| BsgI | GTGCAG | 3 cut(s) | 88, 157, 199 |
| Bsh1285I | CGRYCG | 1 cut(s) | 9 |
| BsiEI | CGRYCG | 1 cut(s) | 9 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BsrI | ACTGG | 1 cut(s) | 168 |
| Bst4CI | ACNGT | 3 cut(s) | 38, 112, 204 |
| BstMCI | CGRYCG | 1 cut(s) | 9 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 75 |
| BstV1I | GCAGC | 1 cut(s) | 81 |
| BtgZI | GCGATG | 1 cut(s) | 141 |
| Csp6I | GTAC | 2 cut(s) | 108, 200 |
| CviQI | GTAC | 2 cut(s) | 108, 200 |
| FaiI | YATR | 3 cut(s) | 29, 63, 174 |
| Fnu4HI | GCNGC | 1 cut(s) | 70 |
| Fsp4HI | GCNGC | 1 cut(s) | 70 |
| GluI | GCNGC | 1 cut(s) | 70 |
| HpyCH4III | ACNGT | 3 cut(s) | 38, 112, 204 |
| HpyCH4V | TGCA | 3 cut(s) | 69, 138, 180 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 75 |
| LpnPI | CCDG | 4 cut(s) | 70, 102, 149, 172 |
| Lsp1109I | GCAGC | 1 cut(s) | 81 |
| MnlI | CCTC | 1 cut(s) | 67 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 75 |
| PkrI | GCNGC | 1 cut(s) | 71 |
| RsaI | GTAC | 2 cut(s) | 109, 201 |
| RsaNI | GTAC | 2 cut(s) | 108, 200 |
| SatI | GCNGC | 1 cut(s) | 70 |
| SsiI | CCGC | 1 cut(s) | 5 |
| TaaI | ACNGT | 3 cut(s) | 38, 112, 204 |
| TaqI | TCGA | 1 cut(s) | 9 |
| TatI | WGTACW | 2 cut(s) | 107, 199 |
| TseI | GCWGC | 1 cut(s) | 69 |