Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0006806

Physical Location & Seq

Genomic Coordinates Forward (+)

57016605 .. 57018773

Gene Structure 2169 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0406300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGGCCTTATCATTATCCCCCATCTTCTTCATTCTTCTCTCCCTCTACGTCTCCCCCTCCTTTTACGCACATCCGAGCAAGGAAACTGCGGCTGAAACTCTTTCAGCCGTCGCTTCCAACGGAGGAGGAGAGTGGGTTCTTCTTCAAAAAAGCATCGGAGTCTCGGCAATGCACATGCAGCTTCTCAAGAACAACAGAGTCATCATCTTCGACCGCACCAACATCGGCCCTTCCAACCTCACACTCCCCGAGGACAAAAAGTACTGCCTCAACTACACCATCCACAACAAACCCGAGCTCCTTATAGACTGCACCGCGCACTCCGTCTCCTACGACGTCGCTTCCAACACTTTCCGCCCCCTCGTCGTCATCACCGACCCGTGGTGCTCCTCCGGCTCCGTGGACCCTACCGGAACCCTAATCCAGACCGGAGGCTACGGCACCGGCAGCCGCGCCGTCCGCACGGTCCCGCCCTGCGACGACGACACTTGTGACTGGACGGAACATCAGCAAGACAGCCTCGCGGAGAACAGGTGGTACGCCTCGTCGCAAATCCTCCCCGACGGACGCGTCATCGTCGTCGGAGGCCGAAAAGCTTTCACGTACGAGTTCTATCCCAAAACAAACGACAGGTCGTCGGATAAATATTACCTAAAATTTTTGGTAGAGACGTATGATCAGAGAGAGGAGAACAATCTCTATCCATTTATGCATCTCTTGCCTGACGGGAACCTCTTCTTGTTTGCAAACAACCGGTCGATTTTATTGGACTACGCCAATAACAGGGTCATTAAGGAGTTTCCGGTCATGCCCGGCGGCGTCAAGAGGAACTACCCGAGCACCGGGTCGTCGGTGCTCCTCCCGCTCAAAATAAACGGGTTGGGTTTACCCGAAGCCGAGGTGTTGATATGCGGCGGAGCGGAGCTTGGTGCGTTTTCATTGACAGATGGAAAGTCGGACAAAAAGAAAGTGTTCAAGGGAGCCTCTAGCACTTGTGGTAGGATCAAAGTGACGGACCCGGATCCCAAATGGGCCATGGAGACGCTGCCCATGCCACGTGTCATGCCGGACATGCTGTTGTTACCGACGGGTGACGTGATCATCATCAACGGCGCGTCGAATGGGACTGCGGGCTGGGAAGATGCGACAAACCCGGTTTTGAACCCGGTTCTTTACAAGACCTACGAGAACAAACCGGAATCTCGGTTCACTGTACTCACGCCCTCTGAAATTCCGAGAATGTACCACTCCTCGGCCGTGCTTTTGCCAGATGGCAGGATATTAGTGGGCGGAAGTAACACTCACGAAAGGTACAGTTTCAGACGAACATTCCCTACTGACCTCAGCTTGGAGGCTTATATTCCGCCGTATCTGGGCCACACCTTCCATACCCTCCGTCCTACAATCCTGTCCGTTGAATCGAGGACTAAGACTGTATCGTACGGTCAAAATTTCAGGGTTAAGTTTCGGTTAGATGTGCGTACAGATGATTCTTCCAAGTTTTCATTGGTCATTGTAACGCCGTCGTTTACGACGCACTCGTTTGCTATGAATCAGAGGATGGTGGTTTTGGAGATTGTTAGGTTGAAGCATTTAAACAGTAGATATAGAAAGCCGTCGGATAAGTATGATTACATGATTGTGGCCCGCGGCCCACCGAAGAACACGGTGGCGCCGCCGGGTTACTATATGCTTTTCCTTGTTCATGCTGGAATTCCTGGCCAGGCTACTTGGGTGAAGGTGGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004000 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006152 GO:0006154 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009116 GO:0009119 GO:0009163 GO:0009164 GO:0009987 GO:0016787 GO:0016810 GO:0016814 GO:0017144 GO:0018130 GO:0019239 GO:0019438 GO:0019439 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0034656 GO:0042278 GO:0042451 GO:0042454 GO:0042455 GO:0042737 GO:0043094 GO:0043101 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044282 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046085 GO:0046102 GO:0046103 GO:0046128 GO:0046129 GO:0046130 GO:0046483 GO:0046700 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0072523 GO:1901135 GO:1901136 GO:1901137 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901657 GO:1901658 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 ko05340 map00230 map01100 map05340

Pfam Domains

Protein Families

A_deaminase

Protein Analysis

582

Amino Acids

64.91

Weight (kDa)

8.58

Isoelectric Point (pI)

39.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyoxal_oxid_N	PF07250	57 - 457	2.6e-175	Glyoxal oxidase N-terminus
GO-like_E_set	PF09118	466 - 581	2.1e-27	Galactose oxidase-like, Early set domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04880 AT4G04880 AT4G04880
fragaria_vesca	FvH4_3g02490 FvH4_3g02490 FvH4_3g02490 FvH4_3g02490 FvH4_3g02490 FvH4_3g02490 FvH4_3g02490
malus_domestica	MD10G1317700.v1.1
prunus_persica	Prupe.4G024100_v2.0.a1 Prupe.4G024100_v2.0.a1
pyrus_communis	pycom10g26900
rosa_chinensis	RchiOBHm_Chr5g0003721
rosa_laevigata	RLG00000031170
rosa_multiflora	Rmu_sc0000500.1_g000005 Rmu_sc0033912.1_g000006
rosa_roxburghii	Rroxscaffold_1G00072240
rosa_rugosa	Rorug04G0406300 Rorug04G0406400
rosa_samantha	Rh5AG033400 Rh5BG031800 Rh5CG036100 Rh5DG032400
rosa_wichuraiana	Rw5G003080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	569
AatII	GACGTC	1 cut(s)	339
AccB1I	GGYRCC	2 cut(s)	440, 1672
AccBSI	CCGCTC	2 cut(s)	865, 920
AccII	CGCG	6 cut(s)	317, 453, 524, 570, 1115, 1650
AclWI	GGATC	3 cut(s)	1010, 1016, 1029
AcoI	YGGCCR	2 cut(s)	1254, 1720
AcsI	RAATTY	4 cut(s)	656, 1230, 1450, 1713
AcvI	CACGTG	1 cut(s)	1058
AcyI	GRCGYC	3 cut(s)	336, 819, 1673
AfaI	GTAC	8 cut(s)	263, 539, 605, 1215, 1244, 1313, 1442, 1483
AfiI	CCNNNNNNNGG	6 cut(s)	381, 783, 842, 1252, 1348, 1373
AflIII	ACRYGT	2 cut(s)	568, 1057
AgeI	ACCGGT	1 cut(s)	753
AgsI	TTSAA	5 cut(s)	146, 976, 1162, 1418, 1588
AhdI	GACNNNNNGTC	1 cut(s)	634
AjiI	CACGTC	1 cut(s)	1096
AjnI	CCWGG	2 cut(s)	1717, 1722
AloI	GAACNNNNNNTCC	4 cut(s)	120, 152, 1190, 1222
AluBI	AGCT	5 cut(s)	181, 298, 596, 925, 1347
AluI	AGCT	5 cut(s)	181, 298, 596, 925, 1347
Alw21I	GWGCWC	4 cut(s)	300, 389, 842, 858
Alw26I	GTCTC	5 cut(s)	55, 166, 331, 662, 1034
AlwI	GGATC	3 cut(s)	1010, 1016, 1029
Ama87I	CYCGRG	3 cut(s)	248, 293, 835
AoxI	GGCC	9 cut(s)	3, 226, 586, 1032, 1254, 1375, 1644, 1651, 1720
ApeKI	GCWGC	3 cut(s)	178, 447, 1045
ApoI	RAATTY	4 cut(s)	656, 1230, 1450, 1713
ArsI	GACNNNNNNTTYG	4 cut(s)	617, 649, 740, 772
AsiGI	ACCGGT	1 cut(s)	753
Asp700I	GAANNNNTTC	2 cut(s)	734, 971
AspLEI	GCGC	4 cut(s)	319, 455, 1115, 1675
AspS9I	GGNCC	8 cut(s)	227, 403, 466, 1015, 1032, 1375, 1645, 1652
AsuC2I	CCSGG	6 cut(s)	813, 844, 1019, 1154, 1166, 1680
AsuHPI	GGTGA	3 cut(s)	364, 1103, 1747
AvaI	CYCGRG	3 cut(s)	248, 293, 835
AvaII	GGWCC	3 cut(s)	403, 466, 1015
BalI	TGGCCA	1 cut(s)	1722
BamHI	GGATCC	1 cut(s)	1021
BanI	GGYRCC	2 cut(s)	440, 1672
BanII	GRGCYC	1 cut(s)	300
BbrPI	CACGTG	1 cut(s)	1058
Bbv12I	GWGCWC	4 cut(s)	300, 389, 842, 858
BbvCI	CCTCAGC	1 cut(s)	1343
BbvI	GCAGC	3 cut(s)	190, 459, 1032
BccI	CCATC	5 cut(s)	29, 287, 941, 1265, 1555
BceAI	ACGGC	8 cut(s)	92, 440, 454, 1126, 1241, 1351, 1507, 1600
BcgI	CGANNNNNNTGC	2 cut(s)	205, 239
BciT130I	CCWGG	2 cut(s)	1719, 1724
BclI	TGATCA	2 cut(s)	676, 1098
BcnI	CCSGG	6 cut(s)	813, 844, 1019, 1154, 1166, 1680
BcoDI	GTCTC	5 cut(s)	55, 166, 331, 662, 1034
BfaI	CTAG	1 cut(s)	987
BfoI	RGCGCY	1 cut(s)	1676
BisI	GCNGC	9 cut(s)	90, 179, 448, 451, 817, 913, 1046, 1651, 1676
BlsI	GCNGC	9 cut(s)	91, 180, 449, 452, 818, 914, 1047, 1652, 1677
BmcAI	AGTACT	1 cut(s)	263
Bme1390I	CCNGG	8 cut(s)	813, 844, 1019, 1154, 1166, 1680, 1719, 1724
Bme18I	GGWCC	3 cut(s)	403, 466, 1015
BmeRI	GACNNNNNGTC	1 cut(s)	634
BmeT110I	CYCGRG	3 cut(s)	248, 293, 835
BmgBI	CACGTC	1 cut(s)	1096
BmgT120I	GGNCC	8 cut(s)	227, 403, 466, 1015, 1032, 1375, 1645, 1652
BmrFI	CCNGG	8 cut(s)	813, 844, 1019, 1154, 1166, 1680, 1719, 1724
BmsI	GCATC	3 cut(s)	162, 721, 1132
Bpu10I	CCTNAGC	1 cut(s)	1343
BpuEI	CTTGAG	1 cut(s)	170
BpuMI	CCSGG	6 cut(s)	813, 844, 1019, 1154, 1166, 1680
BsaAI	YACGTR	2 cut(s)	603, 1058
BsaBI	GATNNNNATC	1 cut(s)	1103
BsaHI	GRCGYC	3 cut(s)	336, 819, 1673
BsaJI	CCNNGG	7 cut(s)	249, 380, 399, 897, 1035, 1251, 1648
BsaWI	WCCGGW	5 cut(s)	410, 428, 753, 802, 1195
BsaXI	ACNNNNNCTCC	8 cut(s)	120, 150, 282, 311, 312, 341, 518, 548
Bsc4I	CCNNNNNNNGG	6 cut(s)	381, 783, 842, 1252, 1348, 1373
Bse118I	RCCGGY	2 cut(s)	443, 753
Bse1I	ACTGG	1 cut(s)	500
Bse3DI	GCAATG	1 cut(s)	174
Bse8I	GATNNNNATC	1 cut(s)	1103
BseBI	CCWGG	2 cut(s)	1719, 1724
BseDI	CCNNGG	7 cut(s)	249, 380, 399, 897, 1035, 1251, 1648
BseGI	GGATG	3 cut(s)	70, 279, 1566
BseJI	GATNNNNATC	1 cut(s)	1103
BseLI	CCNNNNNNNGG	6 cut(s)	381, 783, 842, 1252, 1348, 1373
BseMI	GCAATG	1 cut(s)	174
BseMII	CTCAG	1 cut(s)	1357
BseNI	ACTGG	1 cut(s)	500
BseRI	GAGGAG	6 cut(s)	138, 141, 379, 701, 848, 1240
BseX3I	CGGCCG	1 cut(s)	1254
BseXI	GCAGC	3 cut(s)	190, 459, 1032
BseYI	CCCAGC	1 cut(s)	1134
BsgI	GTGCAG	1 cut(s)	295
Bsh1236I	CGCG	6 cut(s)	317, 453, 524, 570, 1115, 1650
Bsh1285I	CGRYCG	3 cut(s)	214, 758, 1257
BshFI	GGCC	9 cut(s)	5, 228, 588, 1034, 1256, 1377, 1646, 1653, 1722
BshNI	GGYRCC	2 cut(s)	440, 1672
BshTI	ACCGGT	1 cut(s)	753
BsiEI	CGRYCG	3 cut(s)	214, 758, 1257
BsiHKAI	GWGCWC	4 cut(s)	300, 389, 842, 858
BsiHKCI	CYCGRG	3 cut(s)	248, 293, 835
BsiWI	CGTACG	2 cut(s)	603, 1440
BslFI	GGGAC	2 cut(s)	452, 1138
BslI	CCNNNNNNNGG	6 cut(s)	381, 783, 842, 1252, 1348, 1373
BsmAI	GTCTC	5 cut(s)	55, 166, 331, 662, 1034
BsmBI	CGTCTC	4 cut(s)	55, 331, 662, 1034
BsmFI	GGGAC	2 cut(s)	452, 1138
BsnI	GGCC	9 cut(s)	5, 228, 588, 1034, 1256, 1377, 1646, 1653, 1722
BsoBI	CYCGRG	3 cut(s)	248, 293, 835
Bsp1286I	GDGCHC	4 cut(s)	300, 389, 842, 858
Bsp143I	GATC	4 cut(s)	676, 1002, 1021, 1098
Bsp19I	CCATGG	1 cut(s)	1035
BspANI	GGCC	9 cut(s)	5, 228, 588, 1034, 1256, 1377, 1646, 1653, 1722
BspCNI	CTCAG	1 cut(s)	1356
BspFNI	CGCG	6 cut(s)	317, 453, 524, 570, 1115, 1650
BspPI	GGATC	3 cut(s)	1010, 1016, 1029
BspT107I	GGYRCC	2 cut(s)	440, 1672
BsrBI	CCGCTC	2 cut(s)	865, 920
BsrDI	GCAATG	1 cut(s)	174
BsrFI	RCCGGY	2 cut(s)	443, 753
BsrI	ACTGG	1 cut(s)	500
BssAI	RCCGGY	2 cut(s)	443, 753
BssECI	CCNNGG	7 cut(s)	249, 380, 399, 897, 1035, 1251, 1648
BssMI	GATC	4 cut(s)	676, 1002, 1021, 1098
BssNI	GRCGYC	3 cut(s)	336, 819, 1673
BssT1I	CCWWGG	1 cut(s)	1035
Bst2UI	CCWGG	2 cut(s)	1719, 1724
Bst4CI	ACNGT	7 cut(s)	466, 1213, 1316, 1435, 1445, 1601, 1669
Bst6I	CTCTTC	1 cut(s)	740
BstACI	GRCGYC	3 cut(s)	336, 819, 1673
BstAPI	GCANNNNNTGC	1 cut(s)	718
BstBAI	YACGTR	2 cut(s)	603, 1058
BstC8I	GCNNGC	2 cut(s)	1132, 1648
BstDEI	CTNAG	2 cut(s)	1343, 1428
BstDSI	CCRYGG	4 cut(s)	380, 399, 1035, 1648
BstF5I	GGATG	3 cut(s)	70, 279, 1566
BstFNI	CGCG	6 cut(s)	317, 453, 524, 570, 1115, 1650
BstH2I	RGCGCY	1 cut(s)	1676
BstHHI	GCGC	4 cut(s)	319, 455, 1115, 1675
BstKTI	GATC	4 cut(s)	679, 1005, 1024, 1101
BstMAI	GTCTC	5 cut(s)	55, 166, 331, 662, 1034
BstMBI	GATC	4 cut(s)	676, 1002, 1021, 1098
BstMCI	CGRYCG	3 cut(s)	214, 758, 1257
BstMWI	GCNNNNNNNGC	8 cut(s)	178, 393, 447, 459, 718, 862, 1051, 1072
BstNI	CCWGG	2 cut(s)	1719, 1724
BstNSI	RCATGY	2 cut(s)	178, 1075
BstSCI	CCNGG	8 cut(s)	811, 842, 1017, 1152, 1164, 1678, 1717, 1722
BstUI	CGCG	6 cut(s)	317, 453, 524, 570, 1115, 1650
BstV1I	GCAGC	3 cut(s)	190, 459, 1032
BstX2I	RGATCY	1 cut(s)	1021
BstYI	RGATCY	1 cut(s)	1021
BstZI	CGGCCG	1 cut(s)	1254
BsuRI	GGCC	9 cut(s)	5, 228, 588, 1034, 1256, 1377, 1646, 1653, 1722
BtgI	CCRYGG	4 cut(s)	380, 399, 1035, 1648
BtrI	CACGTC	1 cut(s)	1096
BtsCI	GGATG	3 cut(s)	70, 279, 1566
BtsIMutI	CAGTG	1 cut(s)	1209
Cac8I	GCNNGC	2 cut(s)	1132, 1648
CfoI	GCGC	4 cut(s)	319, 455, 1115, 1675
Cfr10I	RCCGGY	2 cut(s)	443, 753
Cfr13I	GGNCC	8 cut(s)	227, 403, 466, 1015, 1032, 1375, 1645, 1652
Cfr42I	CCGCGG	1 cut(s)	1651
CseI	GACGC	6 cut(s)	559, 576, 808, 1051, 1104, 1543
Csp6I	GTAC	8 cut(s)	262, 538, 604, 1214, 1243, 1312, 1441, 1482
CspAI	ACCGGT	1 cut(s)	753
CviAII	CATG	8 cut(s)	175, 808, 1036, 1051, 1063, 1072, 1636, 1706
CviQI	GTAC	8 cut(s)	262, 538, 604, 1214, 1243, 1312, 1441, 1482
DdeI	CTNAG	2 cut(s)	1343, 1428
DinI	GGCGCC	1 cut(s)	1674
DpnI	GATC	4 cut(s)	678, 1004, 1023, 1100
DpnII	GATC	4 cut(s)	676, 1002, 1021, 1098
DraI	TTTAAA	1 cut(s)	1596
DrdI	GACNNNNNNGTC	1 cut(s)	569
DriI	GACNNNNNGTC	1 cut(s)	634
DseDI	GACNNNNNNGTC	1 cut(s)	569
EaeI	YGGCCR	2 cut(s)	1254, 1720
EagI	CGGCCG	1 cut(s)	1254
Eam1104I	CTCTTC	1 cut(s)	740
Eam1105I	GACNNNNNGTC	1 cut(s)	634
EarI	CTCTTC	1 cut(s)	740
EciI	GGCGGA	4 cut(s)	344, 930, 1305, 1353
Ecl136II	GAGCTC	1 cut(s)	298
EclXI	CGGCCG	1 cut(s)	1254
Eco130I	CCWWGG	1 cut(s)	1035
Eco24I	GRGCYC	1 cut(s)	300
Eco47I	GGWCC	3 cut(s)	403, 466, 1015
Eco52I	CGGCCG	1 cut(s)	1254
Eco53kI	GAGCTC	1 cut(s)	298
Eco72I	CACGTG	1 cut(s)	1058
Eco88I	CYCGRG	3 cut(s)	248, 293, 835
EcoICRI	GAGCTC	1 cut(s)	298
EcoRI	GAATTC	1 cut(s)	1713
EcoRII	CCWGG	2 cut(s)	1717, 1722
EcoT14I	CCWWGG	1 cut(s)	1035
EcoT22I	ATGCAT	1 cut(s)	714
EcoT38I	GRGCYC	1 cut(s)	300
EgeI	GGCGCC	1 cut(s)	1674
EheI	GGCGCC	1 cut(s)	1674
ErhI	CCWWGG	1 cut(s)	1035
Esp3I	CGTCTC	4 cut(s)	55, 331, 662, 1034
FaeI	CATG	8 cut(s)	178, 811, 1039, 1054, 1066, 1075, 1639, 1709
FaqI	GGGAC	2 cut(s)	452, 1138
FatI	CATG	8 cut(s)	174, 807, 1035, 1050, 1062, 1071, 1635, 1705
FauI	CCCGC	4 cut(s)	477, 870, 1123, 1655
FbaI	TGATCA	2 cut(s)	676, 1098
Fnu4HI	GCNGC	9 cut(s)	90, 179, 448, 451, 817, 913, 1046, 1651, 1676
FokI	GGATG	3 cut(s)	57, 266, 1573
FriOI	GRGCYC	1 cut(s)	300
Fsp4HI	GCNGC	9 cut(s)	90, 179, 448, 451, 817, 913, 1046, 1651, 1676
FspBI	CTAG	1 cut(s)	987
GlaI	GCGC	4 cut(s)	318, 454, 1114, 1674
GluI	GCNGC	9 cut(s)	90, 179, 448, 451, 817, 913, 1046, 1651, 1676
GsaI	CCCAGC	1 cut(s)	1138
HaeII	RGCGCY	1 cut(s)	1676
HaeIII	GGCC	9 cut(s)	5, 228, 588, 1034, 1256, 1377, 1646, 1653, 1722
HgaI	GACGC	6 cut(s)	559, 576, 808, 1051, 1104, 1543
HhaI	GCGC	4 cut(s)	319, 455, 1115, 1675
Hin1I	GRCGYC	3 cut(s)	336, 819, 1673
Hin1II	CATG	8 cut(s)	178, 811, 1039, 1054, 1066, 1075, 1639, 1709
Hin6I	GCGC	4 cut(s)	317, 453, 1113, 1673
HinP1I	GCGC	4 cut(s)	317, 453, 1113, 1673
HindIII	AAGCTT	1 cut(s)	594
HinfI	GANTC	6 cut(s)	159, 198, 1199, 1418, 1490, 1552
HphI	GGTGA	3 cut(s)	364, 1103, 1747
Hpy166II	GTNNAC	4 cut(s)	403, 887, 1209, 1530
Hpy188III	TCNNGA	4 cut(s)	187, 424, 823, 1304
Hpy8I	GTNNAC	4 cut(s)	403, 887, 1209, 1530
HpyAV	CCTTC	3 cut(s)	240, 1393, 1732
HpyCH4III	ACNGT	7 cut(s)	466, 1213, 1316, 1435, 1445, 1601, 1669
HpyCH4IV	ACGT	6 cut(s)	48, 336, 602, 671, 1057, 1095
HpyCH4V	TGCA	5 cut(s)	172, 178, 312, 712, 746
HpyF10VI	GCNNNNNNNGC	8 cut(s)	178, 393, 447, 459, 718, 862, 1051, 1072
HpyF3I	CTNAG	2 cut(s)	1343, 1428
HpySE526I	ACGT	6 cut(s)	48, 336, 602, 671, 1057, 1095
Hsp92I	GRCGYC	3 cut(s)	336, 819, 1673
Hsp92II	CATG	8 cut(s)	178, 811, 1039, 1054, 1066, 1075, 1639, 1709
HspAI	GCGC	4 cut(s)	317, 453, 1113, 1673
KasI	GGCGCC	1 cut(s)	1672
Ksp22I	TGATCA	2 cut(s)	676, 1098
KspI	CCGCGG	1 cut(s)	1651
Kzo9I	GATC	4 cut(s)	676, 1002, 1021, 1098
LmnI	GCTCC	7 cut(s)	303, 392, 401, 861, 917, 922, 980
Lsp1109I	GCAGC	3 cut(s)	190, 459, 1032
LweI	GCATC	3 cut(s)	162, 721, 1132
MaeI	CTAG	1 cut(s)	987
MaeII	ACGT	6 cut(s)	48, 336, 602, 671, 1057, 1095
MaeIII	GTNAC	7 cut(s)	491, 1009, 1080, 1091, 1295, 1516, 1682
MalI	GATC	4 cut(s)	678, 1004, 1023, 1100
MbiI	CCGCTC	2 cut(s)	865, 920
MboI	GATC	4 cut(s)	676, 1002, 1021, 1098
MflI	RGATCY	1 cut(s)	1021
MhlI	GDGCHC	4 cut(s)	300, 389, 842, 858
MlsI	TGGCCA	1 cut(s)	1722
MluCI	AATT	4 cut(s)	656, 1230, 1450, 1713
MluI	ACGCGT	1 cut(s)	568
MluNI	TGGCCA	1 cut(s)	1722
Mly113I	GGCGCC	1 cut(s)	1673
MlyI	GAGTC	2 cut(s)	168, 207
MmeI	TCCRAC	7 cut(s)	141, 258, 369, 562, 618, 936, 1599
Mox20I	TGGCCA	1 cut(s)	1722
Mph1103I	ATGCAT	1 cut(s)	714
MroXI	GAANNNNTTC	2 cut(s)	734, 971
MscI	TGGCCA	1 cut(s)	1722
MseI	TTAA	3 cut(s)	792, 1461, 1595
MslI	CAYNNNNRTG	1 cut(s)	1640
Msp20I	TGGCCA	1 cut(s)	1722
MspA1I	CMGCKG	1 cut(s)	1650
MspR9I	CCNGG	8 cut(s)	813, 844, 1019, 1154, 1166, 1680, 1719, 1724
MvaI	CCWGG	2 cut(s)	1719, 1724
MvnI	CGCG	6 cut(s)	317, 453, 524, 570, 1115, 1650
MwoI	GCNNNNNNNGC	8 cut(s)	178, 393, 447, 459, 718, 862, 1051, 1072
NarI	GGCGCC	1 cut(s)	1673
NciI	CCSGG	6 cut(s)	813, 844, 1019, 1154, 1166, 1680
NcoI	CCATGG	1 cut(s)	1035
NdeII	GATC	4 cut(s)	676, 1002, 1021, 1098
NlaIII	CATG	8 cut(s)	178, 811, 1039, 1054, 1066, 1075, 1639, 1709
NmeAIII	GCCGAG	3 cut(s)	143, 922, 1232
NmuCI	GTSAC	3 cut(s)	491, 1009, 1091
NsiI	ATGCAT	1 cut(s)	714
NspI	RCATGY	2 cut(s)	178, 1075
PcsI	WCGNNNNNNNCGW	2 cut(s)	372, 1538
PdmI	GAANNNNTTC	2 cut(s)	734, 971
PfeI	GAWTC	4 cut(s)	1199, 1418, 1490, 1552
Pfl23II	CGTACG	2 cut(s)	603, 1440
PinAI	ACCGGT	1 cut(s)	753
PkrI	GCNGC	9 cut(s)	91, 180, 449, 452, 818, 914, 1047, 1652, 1677
PleI	GAGTC	2 cut(s)	167, 206
PluTI	GGCGCC	1 cut(s)	1676
PmaCI	CACGTG	1 cut(s)	1058
PmlI	CACGTG	1 cut(s)	1058
PpsI	GAGTC	2 cut(s)	167, 206
Ppu21I	YACGTR	2 cut(s)	603, 1058
Psp124BI	GAGCTC	1 cut(s)	300
Psp6I	CCWGG	2 cut(s)	1717, 1722
PspCI	CACGTG	1 cut(s)	1058
PspFI	CCCAGC	1 cut(s)	1134
PspGI	CCWGG	2 cut(s)	1717, 1722
PspLI	CGTACG	2 cut(s)	603, 1440
PspPI	GGNCC	8 cut(s)	227, 403, 466, 1015, 1032, 1375, 1645, 1652
PsrI	GAACNNNNNNTAC	4 cut(s)	521, 553, 1318, 1350
PsuI	RGATCY	1 cut(s)	1021
RsaI	GTAC	8 cut(s)	263, 539, 605, 1215, 1244, 1313, 1442, 1483
RsaNI	GTAC	8 cut(s)	262, 538, 604, 1214, 1243, 1312, 1441, 1482
RseI	CAYNNNNRTG	1 cut(s)	1640
SacI	GAGCTC	1 cut(s)	300
SacII	CCGCGG	1 cut(s)	1651
SaqAI	TTAA	3 cut(s)	792, 1461, 1595
SatI	GCNGC	9 cut(s)	90, 179, 448, 451, 817, 913, 1046, 1651, 1676
Sau3AI	GATC	4 cut(s)	676, 1002, 1021, 1098
Sau96I	GGNCC	8 cut(s)	227, 403, 466, 1015, 1032, 1375, 1645, 1652
ScaI	AGTACT	1 cut(s)	263
SchI	GAGTC	2 cut(s)	168, 207
ScrFI	CCNGG	8 cut(s)	813, 844, 1019, 1154, 1166, 1680, 1719, 1724
SduI	GDGCHC	4 cut(s)	300, 389, 842, 858
SfaNI	GCATC	3 cut(s)	162, 721, 1132
SfoI	GGCGCC	1 cut(s)	1674
Sfr303I	CCGCGG	1 cut(s)	1651
SgrBI	CCGCGG	1 cut(s)	1651
SinI	GGWCC	3 cut(s)	403, 466, 1015
SmiMI	CAYNNNNRTG	1 cut(s)	1640
SmlI	CTYRAG	1 cut(s)	185
SmoI	CTYRAG	1 cut(s)	185
Sse9I	AATT	4 cut(s)	656, 1230, 1450, 1713
SspDI	GGCGCC	1 cut(s)	1672
SspI	AATATT	1 cut(s)	647
SspMI	CTAG	1 cut(s)	987
SstI	GAGCTC	1 cut(s)	300
StyD4I	CCNGG	8 cut(s)	811, 842, 1017, 1152, 1164, 1678, 1717, 1722
StyI	CCWWGG	1 cut(s)	1035
TaaI	ACNGT	7 cut(s)	466, 1213, 1316, 1435, 1445, 1601, 1669
TaiI	ACGT	6 cut(s)	51, 339, 605, 674, 1060, 1098
TaqI	TCGA	4 cut(s)	210, 758, 1118, 1421
TasI	AATT	4 cut(s)	656, 1230, 1450, 1713
TatI	WGTACW	2 cut(s)	261, 1213
TauI	GCSGC	6 cut(s)	92, 453, 819, 915, 1653, 1678
TfiI	GAWTC	4 cut(s)	1199, 1418, 1490, 1552
Tru1I	TTAA	3 cut(s)	792, 1461, 1595
Tru9I	TTAA	3 cut(s)	792, 1461, 1595
TscAI	CASTG	1 cut(s)	1216
TseFI	GTSAC	3 cut(s)	491, 1009, 1091
TseI	GCWGC	3 cut(s)	178, 447, 1045
Tsp45I	GTSAC	3 cut(s)	491, 1009, 1091
TspDTI	ATGAA	5 cut(s)	19, 927, 1494, 1565, 1694
TspGWI	ACGGA	8 cut(s)	135, 313, 388, 515, 579, 1028, 1385, 1402
TspRI	CASTG	1 cut(s)	1216
VpaK11BI	GGWCC	3 cut(s)	403, 466, 1015
XapI	RAATTY	4 cut(s)	656, 1230, 1450, 1713
XceI	RCATGY	2 cut(s)	178, 1075
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1033, 1504
XmnI	GAANNNNTTC	2 cut(s)	734, 971
XspI	CTAG	1 cut(s)	987
ZraI	GACGTC	1 cut(s)	337
ZrmI	AGTACT	1 cut(s)	263
Zsp2I	ATGCAT	1 cut(s)	714

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.