Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0006806

Physical Location & Seq

Genomic Coordinates Forward (+)

57022349 .. 57024609

Gene Structure 2261 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0406400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGGCTATATTCAAGAACCACGCCGCTTTTTCCACCGTCTTCTTCTACGTCTCCGCCACCCTCTTCTCCCTCTTCATCGCCTCCCCGGACTCCTACTTCAACGACATGTCCCCGGCGCCGGCTCCCACCGTGGCACCATACGACGGCGGGCAGTGGGTTCTTCTCCACAAGAGCATAGGAGTCTCCGCAATGCACATGCAGCTTCTGAAGAACAACAAGGTCATTCTGTTTGACCGAACCGACATGGGGCCCTCCAACGCCACGTACCCCCCCGGCGCCGTTCAATGCCGCAACTACACCGTCCGTAACAGAACCGTAACGGACTGCACCCCTCACTCTCTCTTATACGACGTCGCTTCGGACACCTTCCGCCCCTTGGTCGTGAAATCCGACACGTGGTGCTCGTCCGGCGCGGTGGACCCCAACGGCACGCTTGTCCAGACGGGTGGTTACGGCACTGGGATTCAAGCGATCAGGACTTTCACGCCGTGCGACGACGACACGTGTCAGTGGGTCGAGCTGGGTGTGAAGCTGTTGGCGCAGAGGTGGTACGCGACTAACCAGATTCTCCCCGACGGCCGCGTCATTGTCGTCGGCGGAAGGCGGGCTTTCAACTACGAGTTTTATCCCAAGGCGGACGACAAGTCGTCCAAGCTTTACAACATGAGGTTCTTGTGGGAGACGAAGGACTTTTACGAGGAGAACAATCTTTATCCGTTCTTGCATCTCTTGCCCGACGGCAACCTCTTCGTTTTCGCCAACAACCGGTCGATTCTCTTCGACTACAATAACAACACCGTCGTCAAGAAGTTTCCGGCGATGCCAGGCGGTGTCAAGAGGTCCTACCCGGCTACCGGGTCGTCCGTGATGCTCCCACTCAAGATGAACGGAGTTCTTGACAATTCGGGTCAACCCGAGGTGGAAATCTTGATTTGCGGCGGGTCGTACGGCGGCGCTTACTACAAATCGAACCGGCAGAAAGTGTACATCGGCGCATCCGCCAGCTGCGGCCGGATCAAGCTCTCGGATCCGAACCCGAACTGGGTGATGGAGGAAATGCCGCTGCCACGTGTCATGGGCGACATGCTGCTCTTGCCGAACGGTGACGTTCTCATCCTGAACGGCGCGGCGAACGGAACGGCAGGGTGGGAGGACGCGATCAACCCGGTTTTGCACCCGGTGCTGTACAAGACCTACGAGCCCGACCCGAGTCGCCGGTTTGTGATACTGAACCCGACCACAATCCCCAGAATGTACCACTCCTCGTGTTTGCTGTTGCCAGATGGCAGAATACTAGTGGGAGGGAGCAATCCCCACCAAATGTACAACTTCAGGCGAGCTTTCCCGACCGAGCTGAGCCTGGAGGCGTATCTTCCGCCGTACCTGAGCCCCAGCTCGGCCCCTCTGCGCCCTACGATCATATCCATCGAAGCAGAAGGAGGGAACATCGTATCTTACGGTCAGGAATTCTCCGTCAACTTCGGACTGTCAGTGTACCGGCCTGGGGTGGCGATAACCGTCGCGCTCGTTTCGCCGTCGTTTACGACGCATTCGCTGGCCATGAACCAGAGGGTGGTGGTTTTGGAGGTAGCGAGTCTGAAGCGTTTGTCTGTTTTCGATTACAAGATTACGGCGCGGGGCCCGCTGTCGACATCCGTGGCGCCACCTGGGTATTACATGATATTCATTGTCCACGCTGGAGTTCCAGGTCAGGCTCTGTGGGTCAAGGTGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004000 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006152 GO:0006154 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009116 GO:0009119 GO:0009163 GO:0009164 GO:0009987 GO:0016787 GO:0016810 GO:0016814 GO:0017144 GO:0018130 GO:0019239 GO:0019438 GO:0019439 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0034656 GO:0042278 GO:0042451 GO:0042454 GO:0042455 GO:0042737 GO:0043094 GO:0043101 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044282 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046085 GO:0046102 GO:0046103 GO:0046128 GO:0046129 GO:0046130 GO:0046483 GO:0046700 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0072523 GO:1901135 GO:1901136 GO:1901137 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901657 GO:1901658 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 ko05340 map00230 map01100 map05340

Pfam Domains

Protein Families

A_deaminase

Protein Analysis

578

Amino Acids

63.8

Weight (kDa)

8.44

Isoelectric Point (pI)

44.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyoxal_oxid_N	PF07250	64 - 461	1.7e-175	Glyoxal oxidase N-terminus
GO-like_E_set	PF09118	470 - 577	5.2e-26	Galactose oxidase-like, Early set domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04880 AT4G04880 AT4G04880
fragaria_vesca	FvH4_3g02490 FvH4_3g02490 FvH4_3g02490 FvH4_3g02490 FvH4_3g02490 FvH4_3g02490 FvH4_3g02490
malus_domestica	MD10G1317700.v1.1
prunus_persica	Prupe.4G024100_v2.0.a1 Prupe.4G024100_v2.0.a1
pyrus_communis	pycom10g26900
rosa_chinensis	RchiOBHm_Chr5g0003721
rosa_laevigata	RLG00000031170
rosa_multiflora	Rmu_sc0000500.1_g000005 Rmu_sc0033912.1_g000006
rosa_roxburghii	Rroxscaffold_1G00072240
rosa_rugosa	Rorug04G0406300 Rorug04G0406400
rosa_samantha	Rh5AG033400 Rh5BG031800 Rh5CG036100 Rh5DG032400
rosa_wichuraiana	Rw5G003080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	581
AatII	GACGTC	1 cut(s)	354
AccB1I	GGYRCC	4 cut(s)	115, 133, 275, 1660
AccB7I	CCANNNNNTGG	1 cut(s)	1573
AccI	GTMKAC	1 cut(s)	1649
AccII	CGCG	7 cut(s)	413, 554, 582, 1127, 1157, 1523, 1636
AclWI	GGATC	3 cut(s)	1022, 1022, 1035
AcoI	YGGCCR	3 cut(s)	577, 1009, 1557
AcsI	RAATTY	1 cut(s)	1466
AcuI	CTGAAG	3 cut(s)	227, 1315, 1619
AcvI	CACGTG	3 cut(s)	396, 504, 1070
AcyI	GRCGYC	4 cut(s)	116, 276, 351, 1661
AdeI	CACNNNGTG	3 cut(s)	399, 489, 1180
AfaI	GTAC	9 cut(s)	266, 551, 947, 986, 1187, 1256, 1325, 1382, 1496
AflIII	ACRYGT	5 cut(s)	105, 393, 501, 503, 1069
AgeI	ACCGGT	1 cut(s)	765
AgsI	TTSAA	5 cut(s)	13, 100, 284, 467, 613
AhdI	GACNNNNNGTC	2 cut(s)	643, 646
AhlI	ACTAGT	1 cut(s)	1294
AjnI	CCWGG	5 cut(s)	823, 1359, 1501, 1666, 1705
AluBI	AGCT	9 cut(s)	202, 520, 532, 655, 1005, 1021, 1340, 1354, 1395
AluI	AGCT	9 cut(s)	202, 520, 532, 655, 1005, 1021, 1340, 1354, 1395
Alw21I	GWGCWC	1 cut(s)	404
Alw26I	GTCTC	3 cut(s)	55, 187, 674
AlwI	GGATC	3 cut(s)	1022, 1022, 1035
AlwNI	CAGNNNCTG	2 cut(s)	205, 1717
Ama87I	CYCGRG	2 cut(s)	914, 1207
AoxI	GGCC	7 cut(s)	248, 577, 1009, 1398, 1499, 1557, 1639
ApaI	GGGCCC	2 cut(s)	252, 1643
ApeKI	GCWGC	4 cut(s)	199, 1005, 1063, 1087
ApoI	RAATTY	1 cut(s)	1466
AsiGI	ACCGGT	1 cut(s)	765
AspS9I	GGNCC	7 cut(s)	248, 249, 418, 840, 1399, 1639, 1640
AsuC2I	CCSGG	7 cut(s)	86, 113, 273, 848, 856, 1166, 1178
AsuHPI	GGTGA	2 cut(s)	1057, 1115
AvaI	CYCGRG	2 cut(s)	914, 1207
AvaII	GGWCC	2 cut(s)	418, 840
BaeGI	GKGCMC	2 cut(s)	252, 1643
BalI	TGGCCA	1 cut(s)	1559
BamHI	GGATCC	1 cut(s)	1027
BanI	GGYRCC	4 cut(s)	115, 133, 275, 1660
BanII	GRGCYC	4 cut(s)	252, 1203, 1391, 1643
BarI	GAAGNNNNNNTAC	2 cut(s)	677, 709
BauI	CACGAG	1 cut(s)	1264
BbrPI	CACGTG	3 cut(s)	396, 504, 1070
BbsI	GAAGAC	1 cut(s)	31
Bbv12I	GWGCWC	1 cut(s)	404
BbvI	GCAGC	4 cut(s)	211, 992, 1050, 1074
BccI	CCATC	3 cut(s)	1042, 1277, 1433
BcgI	CGANNNNNNTGC	2 cut(s)	730, 764
BciT130I	CCWGG	5 cut(s)	825, 1361, 1503, 1668, 1707
BcnI	CCSGG	7 cut(s)	86, 113, 273, 848, 856, 1166, 1178
BcoDI	GTCTC	3 cut(s)	55, 187, 674
BcuI	ACTAGT	1 cut(s)	1294
BfaI	CTAG	1 cut(s)	1295
BfoI	RGCGCY	4 cut(s)	119, 279, 957, 1664
BlpI	GCTNAGC	1 cut(s)	1355
Bme18I	GGWCC	2 cut(s)	418, 840
BmeRI	GACNNNNNGTC	2 cut(s)	643, 646
BmeT110I	CYCGRG	2 cut(s)	914, 1207
BmgT120I	GGNCC	7 cut(s)	248, 249, 418, 840, 1399, 1639, 1640
BmrI	ACTGGG	2 cut(s)	468, 1051
BmsI	GCATC	4 cut(s)	733, 810, 858, 1004
BmuI	ACTGGG	2 cut(s)	468, 1051
BoxI	GACNNNNGTC	2 cut(s)	504, 1209
BpiI	GAAGAC	1 cut(s)	31
BpmI	CTGGAG	2 cut(s)	1382, 1719
Bpu10I	CCTNAGC	1 cut(s)	1385
Bpu1102I	GCTNAGC	1 cut(s)	1355
BpuEI	CTTGAG	1 cut(s)	863
BpuMI	CCSGG	7 cut(s)	86, 113, 273, 848, 856, 1166, 1178
BsaAI	YACGTR	4 cut(s)	264, 396, 504, 1070
BsaHI	GRCGYC	4 cut(s)	116, 276, 351, 1661
BsaWI	WCCGGW	1 cut(s)	765
Bse118I	RCCGGY	5 cut(s)	118, 765, 972, 1215, 1497
Bse1I	ACTGG	2 cut(s)	463, 1046
Bse3DI	GCAATG	1 cut(s)	195
BseBI	CCWGG	5 cut(s)	825, 1361, 1503, 1668, 1707
BseGI	GGATG	3 cut(s)	995, 1113, 1652
BseMI	GCAATG	1 cut(s)	195
BseMII	CTCAG	2 cut(s)	1346, 1376
BseNI	ACTGG	2 cut(s)	463, 1046
BseRI	GAGGAG	2 cut(s)	713, 1252
BseSI	GKGCMC	2 cut(s)	252, 1643
BseX3I	CGGCCG	2 cut(s)	577, 1009
BseXI	GCAGC	4 cut(s)	211, 992, 1050, 1074
BseYI	CCCAGC	2 cut(s)	520, 1391
BsgI	GTGCAG	1 cut(s)	310
Bsh1236I	CGCG	7 cut(s)	413, 554, 582, 1127, 1157, 1523, 1636
Bsh1285I	CGRYCG	4 cut(s)	580, 770, 1012, 1350
BshFI	GGCC	7 cut(s)	250, 579, 1011, 1400, 1501, 1559, 1641
BshNI	GGYRCC	4 cut(s)	115, 133, 275, 1660
BshTI	ACCGGT	1 cut(s)	765
BsiEI	CGRYCG	4 cut(s)	580, 770, 1012, 1350
BsiHKAI	GWGCWC	1 cut(s)	404
BsiHKCI	CYCGRG	2 cut(s)	914, 1207
BsiWI	CGTACG	1 cut(s)	945
BslFI	GGGAC	1 cut(s)	94
BsmAI	GTCTC	3 cut(s)	55, 187, 674
BsmBI	CGTCTC	2 cut(s)	55, 674
BsmFI	GGGAC	1 cut(s)	94
BsmI	GAATGC	1 cut(s)	1549
BsnI	GGCC	7 cut(s)	250, 579, 1011, 1400, 1501, 1559, 1641
BsoBI	CYCGRG	2 cut(s)	914, 1207
Bsp120I	GGGCCC	2 cut(s)	248, 1639
Bsp1286I	GDGCHC	5 cut(s)	252, 404, 1203, 1391, 1643
Bsp1407I	TGTACA	3 cut(s)	984, 1185, 1323
Bsp143I	GATC	5 cut(s)	471, 1014, 1027, 1158, 1416
Bsp1720I	GCTNAGC	1 cut(s)	1355
BspANI	GGCC	7 cut(s)	250, 579, 1011, 1400, 1501, 1559, 1641
BspCNI	CTCAG	2 cut(s)	1347, 1377
BspFNI	CGCG	7 cut(s)	413, 554, 582, 1127, 1157, 1523, 1636
BspPI	GGATC	3 cut(s)	1022, 1022, 1035
BspT107I	GGYRCC	4 cut(s)	115, 133, 275, 1660
BsrDI	GCAATG	1 cut(s)	195
BsrFI	RCCGGY	5 cut(s)	118, 765, 972, 1215, 1497
BsrGI	TGTACA	3 cut(s)	984, 1185, 1323
BsrI	ACTGG	2 cut(s)	463, 1046
BssAI	RCCGGY	5 cut(s)	118, 765, 972, 1215, 1497
BssMI	GATC	5 cut(s)	471, 1014, 1027, 1158, 1416
BssNI	GRCGYC	4 cut(s)	116, 276, 351, 1661
BssSI	CACGAG	1 cut(s)	1264
BssT1I	CCWWGG	2 cut(s)	375, 630
Bst2BI	CACGAG	1 cut(s)	1264
Bst2UI	CCWGG	5 cut(s)	825, 1361, 1503, 1668, 1707
Bst4CI	ACNGT	9 cut(s)	37, 130, 301, 316, 799, 1103, 1460, 1488, 1519
Bst6I	CTCTTC	4 cut(s)	68, 77, 752, 782
BstACI	GRCGYC	4 cut(s)	116, 276, 351, 1661
BstAPI	GCANNNNNTGC	2 cut(s)	730, 1180
BstAUI	TGTACA	3 cut(s)	984, 1185, 1323
BstBAI	YACGTR	4 cut(s)	264, 396, 504, 1070
BstC8I	GCNNGC	8 cut(s)	120, 149, 431, 606, 1003, 1338, 1557, 1643
BstDEI	CTNAG	2 cut(s)	1355, 1385
BstDSI	CCRYGG	2 cut(s)	129, 1656
BstF5I	GGATG	3 cut(s)	995, 1113, 1652
BstFNI	CGCG	7 cut(s)	413, 554, 582, 1127, 1157, 1523, 1636
BstH2I	RGCGCY	4 cut(s)	119, 279, 957, 1664
BstKTI	GATC	5 cut(s)	474, 1017, 1030, 1161, 1419
BstMAI	GTCTC	3 cut(s)	55, 187, 674
BstMBI	GATC	5 cut(s)	471, 1014, 1027, 1158, 1416
BstMCI	CGRYCG	4 cut(s)	580, 770, 1012, 1350
BstMWI	GCNNNNNNNGC	8 cut(s)	199, 408, 538, 730, 1093, 1180, 1531, 1642
BstNI	CCWGG	5 cut(s)	825, 1361, 1503, 1668, 1707
BstNSI	RCATGY	3 cut(s)	109, 199, 1087
BstPAI	GACNNNNGTC	2 cut(s)	504, 1209
BstSLI	GKGCMC	2 cut(s)	252, 1643
BstUI	CGCG	7 cut(s)	413, 554, 582, 1127, 1157, 1523, 1636
BstV1I	GCAGC	4 cut(s)	211, 992, 1050, 1074
BstV2I	GAAGAC	1 cut(s)	31
BstX2I	RGATCY	1 cut(s)	1027
BstXI	CCANNNNNNTGG	1 cut(s)	446
BstYI	RGATCY	1 cut(s)	1027
BstZI	CGGCCG	2 cut(s)	577, 1009
BsuRI	GGCC	7 cut(s)	250, 579, 1011, 1400, 1501, 1559, 1641
BtgI	CCRYGG	2 cut(s)	129, 1656
BtgZI	GCGATG	2 cut(s)	61, 833
BtsCI	GGATG	3 cut(s)	995, 1113, 1652
BtsI	GCAGTG	1 cut(s)	158
BtsIMutI	CAGTG	4 cut(s)	158, 456, 515, 1497
Cac8I	GCNNGC	8 cut(s)	120, 149, 431, 606, 1003, 1338, 1557, 1643
CaiI	CAGNNNCTG	2 cut(s)	205, 1717
Cfr10I	RCCGGY	5 cut(s)	118, 765, 972, 1215, 1497
Cfr13I	GGNCC	7 cut(s)	248, 249, 418, 840, 1399, 1639, 1640
CseI	GACGC	3 cut(s)	571, 1163, 1555
Csp6I	GTAC	9 cut(s)	265, 550, 946, 985, 1186, 1255, 1324, 1381, 1495
CspAI	ACCGGT	1 cut(s)	765
CviAII	CATG	8 cut(s)	106, 196, 244, 664, 1075, 1084, 1561, 1678
CviQI	GTAC	9 cut(s)	265, 550, 946, 985, 1186, 1255, 1324, 1381, 1495
DdeI	CTNAG	2 cut(s)	1355, 1385
DinI	GGCGCC	3 cut(s)	117, 277, 1662
DpnI	GATC	5 cut(s)	473, 1016, 1029, 1160, 1418
DpnII	GATC	5 cut(s)	471, 1014, 1027, 1158, 1416
DraIII	CACNNNGTG	3 cut(s)	399, 489, 1180
DrdI	GACNNNNNNGTC	1 cut(s)	581
DriI	GACNNNNNGTC	2 cut(s)	643, 646
DseDI	GACNNNNNNGTC	1 cut(s)	581
EaeI	YGGCCR	3 cut(s)	577, 1009, 1557
EagI	CGGCCG	2 cut(s)	577, 1009
Eam1104I	CTCTTC	4 cut(s)	68, 77, 752, 782
Eam1105I	GACNNNNNGTC	2 cut(s)	643, 646
EarI	CTCTTC	4 cut(s)	68, 77, 752, 782
EciI	GGCGGA	6 cut(s)	43, 359, 612, 650, 988, 1365
EclXI	CGGCCG	2 cut(s)	577, 1009
Eco130I	CCWWGG	2 cut(s)	375, 630
Eco24I	GRGCYC	4 cut(s)	252, 1203, 1391, 1643
Eco47I	GGWCC	2 cut(s)	418, 840
Eco52I	CGGCCG	2 cut(s)	577, 1009
Eco57I	CTGAAG	3 cut(s)	227, 1315, 1619
Eco72I	CACGTG	3 cut(s)	396, 504, 1070
Eco88I	CYCGRG	2 cut(s)	914, 1207
EcoO109I	RGGNCCY	4 cut(s)	248, 249, 840, 1639
EcoRI	GAATTC	1 cut(s)	1466
EcoRII	CCWGG	5 cut(s)	823, 1359, 1501, 1666, 1705
EcoT14I	CCWWGG	2 cut(s)	375, 630
EcoT38I	GRGCYC	4 cut(s)	252, 1203, 1391, 1643
EgeI	GGCGCC	3 cut(s)	117, 277, 1662
EheI	GGCGCC	3 cut(s)	117, 277, 1662
ErhI	CCWWGG	2 cut(s)	375, 630
Esp3I	CGTCTC	2 cut(s)	55, 674
FaeI	CATG	8 cut(s)	109, 199, 247, 667, 1078, 1087, 1564, 1681
FalI	AAGNNNNNCTT	2 cut(s)	592, 624
FaqI	GGGAC	1 cut(s)	94
FatI	CATG	8 cut(s)	105, 195, 243, 663, 1074, 1083, 1560, 1677
FauI	CCCGC	5 cut(s)	140, 597, 932, 1629, 1650
FblI	GTMKAC	1 cut(s)	1649
FokI	GGATG	3 cut(s)	982, 1100, 1639
FriOI	GRGCYC	4 cut(s)	252, 1203, 1391, 1643
FspBI	CTAG	1 cut(s)	1295
GsaI	CCCAGC	2 cut(s)	524, 1395
GsuI	CTGGAG	2 cut(s)	1382, 1719
HaeII	RGCGCY	4 cut(s)	119, 279, 957, 1664
HaeIII	GGCC	7 cut(s)	250, 579, 1011, 1400, 1501, 1559, 1641
HgaI	GACGC	3 cut(s)	571, 1163, 1555
Hin1I	GRCGYC	4 cut(s)	116, 276, 351, 1661
Hin1II	CATG	8 cut(s)	109, 199, 247, 667, 1078, 1087, 1564, 1681
HincII	GTYRAC	3 cut(s)	911, 1477, 1650
HindII	GTYRAC	3 cut(s)	911, 1477, 1650
HindIII	AAGCTT	1 cut(s)	653
HinfI	GANTC	7 cut(s)	89, 180, 463, 565, 772, 1210, 1594
HphI	GGTGA	2 cut(s)	1057, 1115
Hpy166II	GTNNAC	8 cut(s)	418, 911, 985, 1477, 1495, 1542, 1650, 1693
Hpy188I	TCNGA	7 cut(s)	207, 361, 391, 1027, 1032, 1484, 1599
Hpy8I	GTNNAC	8 cut(s)	418, 911, 985, 1477, 1495, 1542, 1650, 1693
HpyAV	CCTTC	4 cut(s)	376, 594, 679, 1430
HpyCH4III	ACNGT	9 cut(s)	37, 130, 301, 316, 799, 1103, 1460, 1488, 1519
HpyCH4IV	ACGT	7 cut(s)	48, 263, 351, 395, 503, 1069, 1107
HpyCH4V	TGCA	6 cut(s)	193, 199, 327, 724, 1174, 1732
HpyF10VI	GCNNNNNNNGC	8 cut(s)	199, 408, 538, 730, 1093, 1180, 1531, 1642
HpyF3I	CTNAG	2 cut(s)	1355, 1385
HpySE526I	ACGT	7 cut(s)	48, 263, 351, 395, 503, 1069, 1107
Hsp92I	GRCGYC	4 cut(s)	116, 276, 351, 1661
Hsp92II	CATG	8 cut(s)	109, 199, 247, 667, 1078, 1087, 1564, 1681
KasI	GGCGCC	3 cut(s)	115, 275, 1660
KroI	GCCGGC	1 cut(s)	118
KroNI	GCCGGC	1 cut(s)	120
Kzo9I	GATC	5 cut(s)	471, 1014, 1027, 1158, 1416
LmnI	GCTCC	3 cut(s)	127, 876, 1305
Lsp1109I	GCAGC	4 cut(s)	211, 992, 1050, 1074
LweI	GCATC	4 cut(s)	733, 810, 858, 1004
MaeI	CTAG	1 cut(s)	1295
MaeII	ACGT	7 cut(s)	48, 263, 351, 395, 503, 1069, 1107
MaeIII	GTNAC	4 cut(s)	305, 316, 449, 1103
MalI	GATC	5 cut(s)	473, 1016, 1029, 1160, 1418
MboI	GATC	5 cut(s)	471, 1014, 1027, 1158, 1416
MboII	GAAGA	9 cut(s)	31, 34, 55, 64, 152, 220, 739, 769, 1364
MflI	RGATCY	1 cut(s)	1027
MhlI	GDGCHC	5 cut(s)	252, 404, 1203, 1391, 1643
MlsI	TGGCCA	1 cut(s)	1559
MluCI	AATT	2 cut(s)	901, 1466
MluNI	TGGCCA	1 cut(s)	1559
Mly113I	GGCGCC	3 cut(s)	116, 276, 1661
MlyI	GAGTC	4 cut(s)	83, 189, 1219, 1603
MmeI	TCCRAC	2 cut(s)	279, 414
Mox20I	TGGCCA	1 cut(s)	1559
MroNI	GCCGGC	1 cut(s)	118
MscI	TGGCCA	1 cut(s)	1559
Msp20I	TGGCCA	1 cut(s)	1559
MspA1I	CMGCKG	3 cut(s)	1005, 1063, 1645
Mva1269I	GAATGC	1 cut(s)	1549
MvaI	CCWGG	5 cut(s)	825, 1361, 1503, 1668, 1707
MvnI	CGCG	7 cut(s)	413, 554, 582, 1127, 1157, 1523, 1636
MwoI	GCNNNNNNNGC	8 cut(s)	199, 408, 538, 730, 1093, 1180, 1531, 1642
NaeI	GCCGGC	1 cut(s)	120
NarI	GGCGCC	3 cut(s)	116, 276, 1661
NciI	CCSGG	7 cut(s)	86, 113, 273, 848, 856, 1166, 1178
NdeII	GATC	5 cut(s)	471, 1014, 1027, 1158, 1416
NgoMIV	GCCGGC	1 cut(s)	118
NlaIII	CATG	8 cut(s)	109, 199, 247, 667, 1078, 1087, 1564, 1681
NmeAIII	GCCGAG	1 cut(s)	1376
NmuCI	GTSAC	1 cut(s)	1103
NspI	RCATGY	3 cut(s)	109, 199, 1087
PciI	ACATGT	1 cut(s)	105
PcsI	WCGNNNNNNNCGW	2 cut(s)	387, 401
PctI	GAATGC	1 cut(s)	1549
PdiI	GCCGGC	1 cut(s)	120
PfeI	GAWTC	3 cut(s)	463, 565, 772
Pfl23II	CGTACG	1 cut(s)	945
PflMI	CCANNNNNTGG	1 cut(s)	1573
PinAI	ACCGGT	1 cut(s)	765
PleI	GAGTC	4 cut(s)	83, 188, 1218, 1602
PluTI	GGCGCC	3 cut(s)	119, 279, 1664
PmaCI	CACGTG	3 cut(s)	396, 504, 1070
PmlI	CACGTG	3 cut(s)	396, 504, 1070
PpsI	GAGTC	4 cut(s)	83, 188, 1218, 1602
Ppu21I	YACGTR	4 cut(s)	264, 396, 504, 1070
PpuMI	RGGWCCY	1 cut(s)	840
PscI	ACATGT	1 cut(s)	105
PshAI	GACNNNNGTC	2 cut(s)	504, 1209
Psp5II	RGGWCCY	1 cut(s)	840
Psp6I	CCWGG	5 cut(s)	823, 1359, 1501, 1666, 1705
PspCI	CACGTG	3 cut(s)	396, 504, 1070
PspFI	CCCAGC	2 cut(s)	520, 1391
PspGI	CCWGG	5 cut(s)	823, 1359, 1501, 1666, 1705
PspLI	CGTACG	1 cut(s)	945
PspOMI	GGGCCC	2 cut(s)	248, 1639
PspPI	GGNCC	7 cut(s)	248, 249, 418, 840, 1399, 1639, 1640
PspPPI	RGGWCCY	1 cut(s)	840
PstNI	CAGNNNCTG	2 cut(s)	205, 1717
PsuI	RGATCY	1 cut(s)	1027
PvuII	CAGCTG	1 cut(s)	1005
RsaI	GTAC	9 cut(s)	266, 551, 947, 986, 1187, 1256, 1325, 1382, 1496
RsaNI	GTAC	9 cut(s)	265, 550, 946, 985, 1186, 1255, 1324, 1381, 1495
SalI	GTCGAC	1 cut(s)	1648
Sau3AI	GATC	5 cut(s)	471, 1014, 1027, 1158, 1416
Sau96I	GGNCC	7 cut(s)	248, 249, 418, 840, 1399, 1639, 1640
SchI	GAGTC	4 cut(s)	83, 189, 1219, 1603
SduI	GDGCHC	5 cut(s)	252, 404, 1203, 1391, 1643
SfaNI	GCATC	4 cut(s)	733, 810, 858, 1004
SfoI	GGCGCC	3 cut(s)	117, 277, 1662
SinI	GGWCC	2 cut(s)	418, 840
SmlI	CTYRAG	1 cut(s)	878
SmoI	CTYRAG	1 cut(s)	878
SpeI	ACTAGT	1 cut(s)	1294
Sse9I	AATT	2 cut(s)	901, 1466
SspDI	GGCGCC	3 cut(s)	115, 275, 1660
SspMI	CTAG	1 cut(s)	1295
StyI	CCWWGG	2 cut(s)	375, 630
TaaI	ACNGT	9 cut(s)	37, 130, 301, 316, 799, 1103, 1460, 1488, 1519
TaiI	ACGT	7 cut(s)	51, 266, 354, 398, 506, 1072, 1110
TaqI	TCGA	7 cut(s)	516, 770, 780, 968, 1428, 1617, 1649
TaqII	GACCGA	2 cut(s)	249, 1364
TasI	AATT	2 cut(s)	901, 1466
TatI	WGTACW	3 cut(s)	984, 1185, 1323
TauI	GCSGC	8 cut(s)	26, 291, 582, 939, 954, 1011, 1063, 1130
TfiI	GAWTC	3 cut(s)	463, 565, 772
TscAI	CASTG	4 cut(s)	158, 463, 515, 1497
TseFI	GTSAC	1 cut(s)	1103
TseI	GCWGC	4 cut(s)	199, 1005, 1063, 1087
Tsp45I	GTSAC	1 cut(s)	1103
TspDTI	ATGAA	4 cut(s)	64, 899, 1577, 1675
TspGWI	ACGGA	8 cut(s)	293, 335, 705, 853, 903, 1149, 1462, 1645
TspRI	CASTG	4 cut(s)	158, 463, 515, 1497
Van91I	CCANNNNNTGG	1 cut(s)	1573
VpaK11BI	GGWCC	2 cut(s)	418, 840
XapI	RAATTY	1 cut(s)	1466
XceI	RCATGY	3 cut(s)	109, 199, 1087
XmiI	GTMKAC	1 cut(s)	1649
XspI	CTAG	1 cut(s)	1295
ZraI	GACGTC	1 cut(s)	352

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.