Rorug04G0457700

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0012913
Physical Location & Seq
Reverse (-)
61075899 .. 61094389
18491 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0457700.1

Sequence Viewer

Length: 1758 bp
ATGAGTGTGGACGAAGCGGTTGCTAGCTCCTTGTGGACTTGGGAGCAGGATAAGGCATTTGAGAATGCCCTGGCAACTTATCCCGAGGATGCTCCAGATCGTTGGGACAAAATTGCAGCTGATGTAGAAGGGAAAAACCTAGAGGAGATAAAGCATCATTATGAACTCTTACTTGATGATATAAGTCAGATCGAAGCTGGTTGTATTCCACTGCCTTGCTACAATTCTTCTTCCGAGGGTTCAACAAGTCATGCCAGTGATGAAGGAACCAGTAAGAAGGGACACTACAGCAGCGAATCTAATCATGGAAGTAAGGCTTCAAGGGCAGATCAGGAACGCCGTAAGGGGATTGCTTGGACAGAGGATGAACACAGGCAATTTCTTCTAGGATTGGAAAAATATGGGAAAGGTGATTGGCGAAGTATATCACGGAACTTTGTGGTAACAAGAACACCCACCCAAGTGGCAAGCCATGCACAAAAGTATTTCATACGTTTGAATTCAATGAACAAGGACAGAAGGCGATCAAGCATCCATGACATCACCAGTGTCAACAATGGAGAAATTGCGGCAATCCAAGGGCCGATCACTGGTCAAGGAAATGGTTCTGCAGTAGGCCCATCTGGCTCTGCGAAATCAACCAAACAATCTGCTGCTGGACCCCCGGGGGTTGGCATGTATGGTGCACCAAGTATCGGGCAACCAATTGGAGGACCTCTTGTCTCAGCTGTTGGCACACCAGTGAATCTTGCTGGCCCTTCCCCACACATGGCATATGGTGTGAGAGCCCCTATGCCTCCTGGAGCACTTGTTCCTGGGGCACCAATGAACATGCCCCCCATGACATATCCTATGCCTCACACGGCTCATAGGATAGCAGATGGGCTGCTACCACTATCAGATGATCTACGATATGGCAAGACCTTGGTCGAATATTGTATCAGAAATCAGAAGTGCTTCATAATCATAGATGTTGGGTGGGAGCGCGGGGATCAAATTCGGTTTGAATCCCGGTTTATCGTGGACGATGAATTTCATTTTCCTGATTTGGGATCGTCAGTGGTCACTCTTACACAATACAGTAAACAACATAGGAAGTGGAACGTTACATATCGCAACAACAATAGTGTCCCCACGCTCAGTTGCACGTGCAAGTTGTTTGAGGCTGATGGAATTCCTTGCTGCCATATATTTACTGTGATGAAAGTGAAGCAGATAACAGTGTTTCCTGAGTCTTTGGTGACAAAGAGGTGGACTAAAGATGCGACGACTATCAATGAAGAAACCCGACCTAGCAATGGAGTGATTTCCGACAATTCACTTCGCCTGGCAAGTCTGGACGGACTTCACGAGAATGTTGTCAAGGATCCTAAGATTTGCATATCAAAAGGTACTCGAACAAATCCCCCCACTGTTGTTGATGATGGCAAAGCAGGGCAGACCAAAGGCGCTATTAAATGTGGTAAGTGTCACCAACCGGGCCACAATGTTCGAACATGCGACAAAGCCACTAATGATGGTAGAGGGGGCAAATCACATGGTGACAGTGTCGATATACCTTCCAATGCTGACCACACCTGTCCCGATGAGGAGGAATACGAGTTTGTTGCTAGTAGCCGGAATACTAACTCTTTGTTGCACCACAGTGAAGAAGCCCGTGATTTTGCCTTCTTTGGGGGGTACGACTCCATAATACCCTCCGTGTCTACTTCCAGATCACATGAAATTTCCAACTCCGGGGAACCCGAGGGGTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

585

Amino Acids

63.75

Weight (kDa)

6.13

Isoelectric Point (pI)

40.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 12 - 55 3.4e-06 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 118 - 163 2.5e-11 Myb-like DNA-binding domain
SWIM PF04434 369 - 401 3.1e-06 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012913)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G29270 AT1G29270
fragaria_vesca FvH4_3g07370 FvH4_3g07370
malus_domestica MD05G1295800.v1.1 MD10G1275900.v1.1
prunus_persica Prupe.4G066300_v2.0.a1
pyrus_communis pycom10g23060
rosa_chinensis RchiOBHm_Chr5g0011571
rosa_laevigata RLG00000031843
rosa_multiflora Rmu_sc0009001.1_g000010
rosa_roxburghii Rroxscaffold_1G00064920
rosa_rugosa Rorug04G0457600 Rorug04G0457700
rosa_samantha Rh5AG089400 Rh5CG098700 Rh5DG084700
rosa_wichuraiana Rw5G007770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 820
AccI GTMKAC 1 cut(s) 1706
AccII CGCG 1 cut(s) 987
AciI CCGC 3 cut(s) 17, 569, 987
AclI AACGTT 1 cut(s) 1104
AclWI GGATC 4 cut(s) 999, 1060, 1361, 1374
AcsI RAATTY 5 cut(s) 499, 996, 1031, 1173, 1725
AcvI CACGTG 1 cut(s) 1149
AdeI CACNNNGTG 1 cut(s) 1541
AfaI GTAC 2 cut(s) 1393, 1682
AfiI CCNNNNNNNGG 9 cut(s) 590, 671, 695, 710, 769, 1049, 1298, 1674, 1737
AgsI TTSAA 5 cut(s) 243, 321, 499, 504, 1007
AhdI GACNNNNNGTC 1 cut(s) 719
AjnI CCWGG 4 cut(s) 69, 799, 814, 1326
AleI CACNNNNGTG 3 cut(s) 461, 740, 1644
AloI GAACNNNNNNTCC 2 cut(s) 795, 827
AluBI AGCT 4 cut(s) 27, 119, 197, 728
AluI AGCT 4 cut(s) 27, 119, 197, 728
Alw21I GWGCWC 2 cut(s) 688, 808
Alw26I GTCTC 1 cut(s) 727
Alw44I GTGCAC 1 cut(s) 684
AlwI GGATC 4 cut(s) 999, 1060, 1361, 1374
Ama87I CYCGRG 3 cut(s) 83, 664, 1745
AoxI GGCC 4 cut(s) 581, 616, 754, 1480
ApaLI GTGCAC 1 cut(s) 684
ApeKI GCWGC 5 cut(s) 116, 291, 653, 886, 1182
ApoI RAATTY 5 cut(s) 499, 996, 1031, 1173, 1725
Asp700I GAANNNNTTC 2 cut(s) 604, 956
AspLEI GCGC 2 cut(s) 987, 1451
AspS9I GGNCC 6 cut(s) 581, 617, 659, 713, 755, 1480
AsuC2I CCSGG 5 cut(s) 665, 666, 1012, 1479, 1738
AsuHPI GGTGA 5 cut(s) 422, 535, 1252, 1463, 1553
AsuII TTCGAA 1 cut(s) 1492
AsuNHI GCTAGC 1 cut(s) 23
AvaI CYCGRG 3 cut(s) 83, 664, 1745
AvaII GGWCC 2 cut(s) 659, 713
BaeGI GKGCMC 2 cut(s) 688, 823
BamHI GGATCC 1 cut(s) 1366
BanI GGYRCC 1 cut(s) 820
BanII GRGCYC 1 cut(s) 790
BarI GAAGNNNNNNTAC 2 cut(s) 269, 301
BauI CACGAG 1 cut(s) 1349
BbrPI CACGTG 1 cut(s) 1149
Bbv12I GWGCWC 2 cut(s) 688, 808
BbvI GCAGC 5 cut(s) 128, 303, 640, 873, 1169
BccI CCATC 5 cut(s) 628, 875, 1163, 1418, 1511
BceAI ACGGC 2 cut(s) 324, 879
BcgI CGANNNNNNTGC 3 cut(s) 36, 1589, 1623
BciT130I CCWGG 4 cut(s) 71, 801, 816, 1328
BcnI CCSGG 5 cut(s) 665, 666, 1012, 1479, 1738
BcoDI GTCTC 1 cut(s) 727
BfaI CTAG 5 cut(s) 24, 140, 386, 1293, 1611
BfmI CTRYAG 2 cut(s) 286, 609
BfoI RGCGCY 1 cut(s) 1452
BglI GCCNNNNNGGC 1 cut(s) 624
BisI GCNGC 6 cut(s) 117, 292, 570, 654, 887, 1183
BlsI GCNGC 6 cut(s) 118, 293, 571, 655, 888, 1184
Bme1390I CCNGG 9 cut(s) 71, 665, 666, 801, 816, 1012, 1328, 1479, 1738
Bme18I GGWCC 2 cut(s) 659, 713
BmeRI GACNNNNNGTC 1 cut(s) 719
BmeT110I CYCGRG 3 cut(s) 83, 664, 1745
BmgT120I GGNCC 6 cut(s) 581, 617, 659, 713, 755, 1480
BmiI GGNNCC 5 cut(s) 268, 661, 822, 1368, 1743
BmrFI CCNGG 9 cut(s) 71, 665, 666, 801, 816, 1012, 1328, 1479, 1738
BmsI GCATC 4 cut(s) 79, 163, 540, 1252
BmtI GCTAGC 1 cut(s) 27
BoxI GACNNNNGTC 1 cut(s) 926
BpmI CTGGAG 2 cut(s) 78, 822
Bpu14I TTCGAA 1 cut(s) 1492
BpuMI CCSGG 5 cut(s) 665, 666, 1012, 1479, 1738
BsaAI YACGTR 1 cut(s) 1149
BsaXI ACNNNNNCTCC 2 cut(s) 795, 825
Bsc4I CCNNNNNNNGG 9 cut(s) 590, 671, 695, 710, 769, 1049, 1298, 1674, 1737
Bse1I ACTGG 5 cut(s) 255, 270, 546, 595, 740
Bse3DI GCAATG 1 cut(s) 1303
BseBI CCWGG 4 cut(s) 71, 801, 816, 1328
BseGI GGATG 3 cut(s) 94, 370, 531
BseLI CCNNNNNNNGG 9 cut(s) 590, 671, 695, 710, 769, 1049, 1298, 1674, 1737
BseMI GCAATG 1 cut(s) 1303
BseMII CTCAG 3 cut(s) 738, 1153, 1221
BseNI ACTGG 5 cut(s) 255, 270, 546, 595, 740
BseRI GAGGAG 2 cut(s) 158, 1604
BseSI GKGCMC 2 cut(s) 688, 823
BseXI GCAGC 5 cut(s) 128, 303, 640, 873, 1169
Bsh1236I CGCG 1 cut(s) 987
BshFI GGCC 4 cut(s) 583, 618, 756, 1482
BshNI GGYRCC 1 cut(s) 820
BsiHKAI GWGCWC 2 cut(s) 688, 808
BsiHKCI CYCGRG 3 cut(s) 83, 664, 1745
BsiSI CCGG 5 cut(s) 665, 1012, 1478, 1618, 1737
BslFI GGGAC 4 cut(s) 119, 294, 1115, 1566
BslI CCNNNNNNNGG 9 cut(s) 590, 671, 695, 710, 769, 1049, 1298, 1674, 1737
BsmAI GTCTC 1 cut(s) 727
BsmFI GGGAC 4 cut(s) 119, 294, 1115, 1566
BsmI GAATGC 1 cut(s) 70
BsnI GGCC 4 cut(s) 583, 618, 756, 1482
BsoBI CYCGRG 3 cut(s) 83, 664, 1745
Bsp119I TTCGAA 1 cut(s) 1492
Bsp1286I GDGCHC 4 cut(s) 688, 790, 808, 823
BspACI CCGC 3 cut(s) 17, 569, 987
BspANI GGCC 4 cut(s) 583, 618, 756, 1482
BspCNI CTCAG 3 cut(s) 737, 1152, 1222
BspFNI CGCG 1 cut(s) 987
BspLI GGNNCC 5 cut(s) 268, 661, 822, 1368, 1743
BspMAI CTGCAG 1 cut(s) 613
BspOI GCTAGC 1 cut(s) 27
BspPI GGATC 4 cut(s) 999, 1060, 1361, 1374
BspT104I TTCGAA 1 cut(s) 1492
BspT107I GGYRCC 1 cut(s) 820
BsrDI GCAATG 1 cut(s) 1303
BsrI ACTGG 5 cut(s) 255, 270, 546, 595, 740
BssSI CACGAG 1 cut(s) 1349
BssT1I CCWWGG 2 cut(s) 577, 924
Bst2BI CACGAG 1 cut(s) 1349
Bst2UI CCWGG 4 cut(s) 71, 801, 816, 1328
Bst4CI ACNGT 6 cut(s) 1082, 1198, 1222, 1414, 1547, 1646
BstAPI GCANNNNNTGC 1 cut(s) 473
BstBAI YACGTR 1 cut(s) 1149
BstBI TTCGAA 1 cut(s) 1492
BstC8I GCNNGC 3 cut(s) 25, 469, 754
BstDEI CTNAG 4 cut(s) 724, 1139, 1230, 1371
BstF5I GGATG 3 cut(s) 94, 370, 531
BstFNI CGCG 1 cut(s) 987
BstH2I RGCGCY 1 cut(s) 1452
BstHHI GCGC 2 cut(s) 987, 1451
BstMAI GTCTC 1 cut(s) 727
BstMWI GCNNNNNNNGC 3 cut(s) 323, 473, 624
BstNI CCWGG 4 cut(s) 71, 801, 816, 1328
BstNSI RCATGY 3 cut(s) 679, 835, 1500
BstPAI GACNNNNGTC 1 cut(s) 926
BstSCI CCNGG 9 cut(s) 69, 663, 664, 799, 814, 1010, 1326, 1477, 1736
BstSFI CTRYAG 2 cut(s) 286, 609
BstSLI GKGCMC 2 cut(s) 688, 823
BstUI CGCG 1 cut(s) 987
BstV1I GCAGC 5 cut(s) 128, 303, 640, 873, 1169
BstX2I RGATCY 1 cut(s) 1366
BstXI CCANNNNNNTGG 2 cut(s) 102, 463
BstYI RGATCY 1 cut(s) 1366
BsuRI GGCC 4 cut(s) 583, 618, 756, 1482
BtsCI GGATG 3 cut(s) 94, 370, 531
BtsI GCAGTG 1 cut(s) 209
Cac8I GCNNGC 3 cut(s) 25, 469, 754
CfoI GCGC 2 cut(s) 987, 1451
Cfr13I GGNCC 6 cut(s) 581, 617, 659, 713, 755, 1480
Cfr9I CCCGGG 1 cut(s) 664
Csp6I GTAC 2 cut(s) 1392, 1681
CspCI CAANNNNNGTGG 2 cut(s) 1399, 1434
CviQI GTAC 2 cut(s) 1392, 1681
DdeI CTNAG 4 cut(s) 724, 1139, 1230, 1371
DraIII CACNNNGTG 1 cut(s) 1541
DriI GACNNNNNGTC 1 cut(s) 719
Eam1105I GACNNNNNGTC 1 cut(s) 719
Eco130I CCWWGG 2 cut(s) 577, 924
Eco24I GRGCYC 1 cut(s) 790
Eco47I GGWCC 2 cut(s) 659, 713
Eco72I CACGTG 1 cut(s) 1149
Eco88I CYCGRG 3 cut(s) 83, 664, 1745
EcoO109I RGGNCCY 1 cut(s) 713
EcoRI GAATTC 2 cut(s) 499, 1173
EcoRII CCWGG 4 cut(s) 69, 799, 814, 1326
EcoT14I CCWWGG 2 cut(s) 577, 924
EcoT38I GRGCYC 1 cut(s) 790
ErhI CCWWGG 2 cut(s) 577, 924
FalI AAGNNNNNCTT 2 cut(s) 301, 333
FaqI GGGAC 4 cut(s) 119, 294, 1115, 1566
FauI CCCGC 1 cut(s) 980
FauNDI CATATG 1 cut(s) 775
FblI GTMKAC 1 cut(s) 1706
Fnu4HI GCNGC 6 cut(s) 117, 292, 570, 654, 887, 1183
FokI GGATG 3 cut(s) 101, 377, 518
FriOI GRGCYC 1 cut(s) 790
Fsp4HI GCNGC 6 cut(s) 117, 292, 570, 654, 887, 1183
FspBI CTAG 5 cut(s) 24, 140, 386, 1293, 1611
GlaI GCGC 2 cut(s) 986, 1450
GluI GCNGC 6 cut(s) 117, 292, 570, 654, 887, 1183
GsuI CTGGAG 2 cut(s) 78, 822
HaeII RGCGCY 1 cut(s) 1452
HaeIII GGCC 4 cut(s) 583, 618, 756, 1482
HapII CCGG 5 cut(s) 665, 1012, 1478, 1618, 1737
HhaI GCGC 2 cut(s) 987, 1451
Hin6I GCGC 2 cut(s) 985, 1449
HinP1I GCGC 2 cut(s) 985, 1449
HincII GTYRAC 1 cut(s) 553
HindII GTYRAC 1 cut(s) 553
HinfI GANTC 5 cut(s) 296, 745, 1007, 1232, 1685
HpaII CCGG 5 cut(s) 665, 1012, 1478, 1618, 1737
HphI GGTGA 5 cut(s) 422, 535, 1252, 1463, 1553
Hpy166II GTNNAC 8 cut(s) 10, 36, 553, 686, 1024, 1085, 1254, 1707
Hpy188I TCNGA 6 cut(s) 189, 235, 901, 944, 951, 1312
Hpy188III TCNNGA 9 cut(s) 83, 95, 332, 1043, 1229, 1337, 1349, 1583, 1713
Hpy8I GTNNAC 8 cut(s) 10, 36, 553, 686, 1024, 1085, 1254, 1707
Hpy99I CGWCG 1 cut(s) 1270
HpyAV CCTTC 7 cut(s) 122, 257, 271, 513, 768, 1569, 1678
HpyCH4III ACNGT 6 cut(s) 1082, 1198, 1222, 1414, 1547, 1646
HpyCH4IV ACGT 3 cut(s) 493, 1104, 1148
HpyCH4V TGCA 8 cut(s) 116, 476, 611, 686, 1146, 1152, 1380, 1639
HpyF10VI GCNNNNNNNGC 3 cut(s) 323, 473, 624
HpyF3I CTNAG 4 cut(s) 724, 1139, 1230, 1371
HpySE526I ACGT 3 cut(s) 493, 1104, 1148
HspAI GCGC 2 cut(s) 985, 1449
LmnI GCTCC 5 cut(s) 32, 43, 97, 803, 982
Lsp1109I GCAGC 5 cut(s) 128, 303, 640, 873, 1169
LweI GCATC 4 cut(s) 79, 163, 540, 1252
MaeI CTAG 5 cut(s) 24, 140, 386, 1293, 1611
MaeII ACGT 3 cut(s) 493, 1104, 1148
MaeIII GTNAC 6 cut(s) 442, 1063, 1105, 1240, 1469, 1541
MboII GAAGA 5 cut(s) 219, 222, 374, 1292, 1661
MfeI CAATTG 1 cut(s) 705
MflI RGATCY 1 cut(s) 1366
MhlI GDGCHC 4 cut(s) 688, 790, 808, 823
MlyI GAGTC 2 cut(s) 1241, 1679
MmeI TCCRAC 2 cut(s) 1335, 1755
MroXI GAANNNNTTC 2 cut(s) 604, 956
MseI TTAA 1 cut(s) 1455
MslI CAYNNNNRTG 6 cut(s) 159, 255, 461, 740, 1353, 1644
MspA1I CMGCKG 2 cut(s) 119, 728
MspI CCGG 5 cut(s) 665, 1012, 1478, 1618, 1737
MspR9I CCNGG 9 cut(s) 71, 665, 666, 801, 816, 1012, 1328, 1479, 1738
MunI CAATTG 1 cut(s) 705
Mva1269I GAATGC 1 cut(s) 70
MvaI CCWGG 4 cut(s) 71, 801, 816, 1328
MvnI CGCG 1 cut(s) 987
MwoI GCNNNNNNNGC 3 cut(s) 323, 473, 624
NciI CCSGG 5 cut(s) 665, 666, 1012, 1479, 1738
NdeI CATATG 1 cut(s) 775
NheI GCTAGC 1 cut(s) 23
NlaIV GGNNCC 5 cut(s) 268, 661, 822, 1368, 1743
NmuCI GTSAC 4 cut(s) 1063, 1240, 1469, 1541
NspI RCATGY 3 cut(s) 679, 835, 1500
NspV TTCGAA 1 cut(s) 1492
OliI CACNNNNGTG 3 cut(s) 461, 740, 1644
PcsI WCGNNNNNNNCGW 1 cut(s) 1347
PctI GAATGC 1 cut(s) 70
PdmI GAANNNNTTC 2 cut(s) 604, 956
PfeI GAWTC 3 cut(s) 296, 745, 1007
PflFI GACNNNGTC 1 cut(s) 1547
PfoI TCCNGGA 1 cut(s) 799
PkrI GCNGC 6 cut(s) 118, 293, 571, 655, 888, 1184
PleI GAGTC 2 cut(s) 1240, 1679
PmaCI CACGTG 1 cut(s) 1149
PmlI CACGTG 1 cut(s) 1149
PpsI GAGTC 2 cut(s) 1240, 1679
Ppu21I YACGTR 1 cut(s) 1149
PpuMI RGGWCCY 1 cut(s) 713
PshAI GACNNNNGTC 1 cut(s) 926
Psp1406I AACGTT 1 cut(s) 1104
Psp5II RGGWCCY 1 cut(s) 713
Psp6I CCWGG 4 cut(s) 69, 799, 814, 1326
PspCI CACGTG 1 cut(s) 1149
PspGI CCWGG 4 cut(s) 69, 799, 814, 1326
PspN4I GGNNCC 5 cut(s) 268, 661, 822, 1368, 1743
PspPI GGNCC 6 cut(s) 581, 617, 659, 713, 755, 1480
PspPPI RGGWCCY 1 cut(s) 713
PstI CTGCAG 1 cut(s) 613
PsuI RGATCY 1 cut(s) 1366
PsyI GACNNNGTC 1 cut(s) 1547
PvuII CAGCTG 2 cut(s) 119, 728
RsaI GTAC 2 cut(s) 1393, 1682
RsaNI GTAC 2 cut(s) 1392, 1681
RseI CAYNNNNRTG 6 cut(s) 159, 255, 461, 740, 1353, 1644
SaqAI TTAA 1 cut(s) 1455
SatI GCNGC 6 cut(s) 117, 292, 570, 654, 887, 1183
Sau96I GGNCC 6 cut(s) 581, 617, 659, 713, 755, 1480
SchI GAGTC 2 cut(s) 1241, 1679
ScrFI CCNGG 9 cut(s) 71, 665, 666, 801, 816, 1012, 1328, 1479, 1738
SduI GDGCHC 4 cut(s) 688, 790, 808, 823
SfaNI GCATC 4 cut(s) 79, 163, 540, 1252
SfcI CTRYAG 2 cut(s) 286, 609
SfuI TTCGAA 1 cut(s) 1492
SinI GGWCC 2 cut(s) 659, 713
SmaI CCCGGG 1 cut(s) 666
SmiMI CAYNNNNRTG 6 cut(s) 159, 255, 461, 740, 1353, 1644
SsiI CCGC 3 cut(s) 17, 569, 987
SspI AATATT 1 cut(s) 935
SspMI CTAG 5 cut(s) 24, 140, 386, 1293, 1611
StyD4I CCNGG 9 cut(s) 69, 663, 664, 799, 814, 1010, 1326, 1477, 1736
StyI CCWWGG 2 cut(s) 577, 924
TaaI ACNGT 6 cut(s) 1082, 1198, 1222, 1414, 1547, 1646
TaiI ACGT 3 cut(s) 496, 1107, 1151
TaqI TCGA 5 cut(s) 192, 930, 1396, 1492, 1551
TauI GCSGC 1 cut(s) 572
TfiI GAWTC 3 cut(s) 296, 745, 1007
Tru1I TTAA 1 cut(s) 1455
Tru9I TTAA 1 cut(s) 1455
TseFI GTSAC 4 cut(s) 1063, 1240, 1469, 1541
TseI GCWGC 5 cut(s) 116, 291, 653, 886, 1182
Tsp45I GTSAC 4 cut(s) 1063, 1240, 1469, 1541
TspGWI ACGGA 3 cut(s) 445, 1356, 1690
TspMI CCCGGG 1 cut(s) 664
Tth111I GACNNNGTC 1 cut(s) 1547
VneI GTGCAC 1 cut(s) 684
VpaK11BI GGWCC 2 cut(s) 659, 713
XapI RAATTY 5 cut(s) 499, 996, 1031, 1173, 1725
XceI RCATGY 3 cut(s) 679, 835, 1500
XmaI CCCGGG 1 cut(s) 664
XmiI GTMKAC 1 cut(s) 1706
XmnI GAANNNNTTC 2 cut(s) 604, 956
XspI CTAG 5 cut(s) 24, 140, 386, 1293, 1611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.