Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0010538

Physical Location & Seq

Genomic Coordinates Reverse (-)

1490578 .. 1496055

Gene Structure 5478 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0023800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGGCAGATTGGAATGGTATGGTGAGCAAAAGCAATGATTTTGGTGTTGGGGGTTCAAGTGAAGAGTTTGAAGAAGAAGAAGTGTGGGGTGTTGTGAAGGAAAGAAACTACTCCAACTCTACGCAGGAGTCTTACTCTTCTGGTTCTTCTTCTGCATGGCGCCTCTCTACAGCTGCAAGAACCATCCCAAGGGCTAATAACAACACTCCAAGTACCCATGAAGCCAAAGTGGTTCAGAAATCAGCTCCTCTCAACATCCCTGATTGGTCAAAGATCTATGGGAAAAGTTCTGGTGCTGCCAAGATTAATGGTTCATGGGTCAATAATGAAGATGATCATGATGGACATGTCAATGTCAATGGTGATGATGAAAATGATGATGATGATGATATGGTGCCTCCACATGAATGGATGGCCAGAAAGCTAGCAAGAAGCCAGGTTTCATCTTTCTCAGTTTGTGAAGGGATTGGTTTAAGCAAAGATTGCAGGAACAAAATGTCTATAAAGAGCAGAGGATGGGGAGGAGAGATAACAATAAGGAATGTGATTTCAAGGAACTTGGCTCTTCTGCTATGCTTGTGCAGCTTCTTTGCTGGAATATTATTCACCAACAGGTTGTGGATGGTTCCTGAATCGTGGCCATCTAGAATTGCAGTTGAAAGGATAAATTCCGAACCTGAGGATTGTAATCAGAAGATTATAGCAGCTGCTAGGGCAATTCAAGAGTCATCTTTACATCATGACTCTCCTGTGTTAGGAAACTCGAAGACTGTTCAATCAGCTTTGAAAAAGAAGTACTTTATGGTTATAGGGATCAATACAGCTTTTAATAGCCGGAAAAGAAGAGATTCAGTACGTGCAACTTGGATGCCACAAGGTGAGGAAAGAAAGAAGCTAGAGGAAGAGAAGGGCATACTCATACGCTTTGTTATAGGCCACAGTGCGACAGCTGGTGGTATTCTTGATAAAGCTATTGAAGCAGAGGAGCTCGTCTATGGAGACTTCTTGAGGCTGAACCATGTTGAGGGCTACCTGGAATTATCAGCCAAGACAAAGACCTACTTTTCCACTGCTGTTTCTTTGTGGGATGCTGATTTCTATATCAAAGTTGATGATGATGTCCATGTAAATCTAGCTACACTTGGGACAATTCTGTCTAGACACCGTGTGAAACCGCGGGTATATATTGGTTGCATGAAGTCAGGTCCAGTCCTCGCTCGAAAGGGCATTAAATACCATGAACCGGAGTTCTGGAAATTCGGGGAGGTGGGAAACAAGTATTTTCGTCATGCTACAGGACAATTATATGCTATTTCAAAGGATTTGGCAACTTACATATCAGTAAACCAGGATGTGCTGCACAAATATGCCAATGAAGATGTTTCCTTGGGATCTTGGTTCATTGGCCTAGACGTGGACCAAGTGGATGATAGGAGACTTTGTTGTGGTACTCCACCTGATTGTGTGTGGAAGGGTATGTCTGGCAACACCTGTGCTGCTTCATTTGATTGGCGTTGCAGCGGCATTTGCAGGTCCATTGAGAGAATGATGGATGTTCACCAGCGTTGTGGTGAAGACAAGAATGCTCTTTGGAATGCAAGGTTTTTAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

537

Amino Acids

60.22

Weight (kDa)

6.42

Isoelectric Point (pI)

40.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Senescence_reg	PF04520	30 - 157	2.9e-19	Senescence regulator
DUF4094	PF13334	184 - 235	3.1e-09	Domain of unknown function (DUF4094)
Galactosyl_T	PF01762	280 - 476	1.5e-47	Galactosyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010538)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g09480 FvH4_3g09480
malus_domestica	MD10G1256400.v1.1
prunus_persica	Prupe.4G087000_v2.0.a1 Prupe.4G087200_v2.0.a1 Prupe.4G087200_v2.0.a1
pyrus_communis	pycom10g21220
rosa_chinensis	RchiOBHm_Chr5g0015061
rosa_laevigata	RLG00000032166
rosa_multiflora	Rmu_co8507481.1_g000001
rosa_roxburghii	Rroxscaffold_1G00061470
rosa_rugosa	Rorug05G0023800 Rorug05G0023900 Rorug05G0023900 Rorug05G0023900 Rorug05G0024000
rosa_samantha	Rh5AG118400 Rh5BG116300 Rh5CG127200 Rh5DG115200
rosa_wichuraiana	Rw5G010230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1153
Acc36I	ACCTGC	1 cut(s)	1521
AccB1I	GGYRCC	2 cut(s)	159, 394
AccII	CGCG	1 cut(s)	1177
AciI	CCGC	3 cut(s)	1175, 1177, 1521
AclWI	GGATC	2 cut(s)	821, 1399
AcoI	YGGCCR	2 cut(s)	414, 638
AcsI	RAATTY	2 cut(s)	667, 1256
AcyI	GRCGYC	1 cut(s)	160
AdeI	CACNNNGTG	2 cut(s)	878, 1168
AfaI	GTAC	4 cut(s)	214, 797, 855, 1450
AfiI	CCNNNNNNNGG	5 cut(s)	189, 755, 1024, 1243, 1414
AflIII	ACRYGT	1 cut(s)	346
AgsI	TTSAA	9 cut(s)	57, 71, 552, 659, 722, 776, 787, 977, 1317
AjiI	CACGTC	1 cut(s)	1414
AjnI	CCWGG	3 cut(s)	435, 1032, 1347
Alw21I	GWGCWC	1 cut(s)	990
Alw26I	GTCTC	2 cut(s)	993, 1429
AlwI	GGATC	2 cut(s)	821, 1399
AoxI	GGCC	4 cut(s)	414, 638, 934, 1405
ApeKI	GCWGC	8 cut(s)	173, 296, 582, 704, 707, 1357, 1496, 1518
ApoI	RAATTY	2 cut(s)	667, 1256
AseI	ATTAAT	1 cut(s)	306
Asp700I	GAANNNNTTC	1 cut(s)	847
AspLEI	GCGC	1 cut(s)	162
AspS9I	GGNCC	3 cut(s)	1205, 1417, 1533
AsuHPI	GGTGA	6 cut(s)	34, 374, 598, 890, 1550, 1583
AsuNHI	GCTAGC	1 cut(s)	424
AvaII	GGWCC	3 cut(s)	1205, 1417, 1533
AxyI	CCTNAGG	1 cut(s)	678
BalI	TGGCCA	2 cut(s)	416, 640
BanI	GGYRCC	2 cut(s)	159, 394
BanII	GRGCYC	1 cut(s)	990
BbsI	GAAGAC	2 cut(s)	773, 1581
Bbv12I	GWGCWC	1 cut(s)	990
BbvI	GCAGC	8 cut(s)	160, 283, 594, 694, 716, 1344, 1483, 1530
BccI	CCATC	7 cut(s)	191, 335, 406, 510, 616, 649, 1543
BciT130I	CCWGG	3 cut(s)	437, 1034, 1349
BclI	TGATCA	1 cut(s)	334
BcoDI	GTCTC	2 cut(s)	993, 1429
BfaI	CTAG	7 cut(s)	425, 645, 711, 896, 1133, 1158, 1409
BfmI	CTRYAG	2 cut(s)	168, 1293
BfoI	RGCGCY	1 cut(s)	163
BfuAI	ACCTGC	1 cut(s)	1521
BglII	AGATCT	1 cut(s)	273
BisI	GCNGC	9 cut(s)	174, 297, 583, 705, 708, 1358, 1497, 1519, 1522
BlsI	GCNGC	9 cut(s)	175, 298, 584, 706, 709, 1359, 1498, 1520, 1523
BmcAI	AGTACT	1 cut(s)	797
Bme1390I	CCNGG	3 cut(s)	437, 1034, 1349
Bme18I	GGWCC	3 cut(s)	1205, 1417, 1533
BmgBI	CACGTC	1 cut(s)	1414
BmgT120I	GGNCC	3 cut(s)	1205, 1417, 1533
BmiI	GGNNCC	3 cut(s)	161, 396, 627
BmrFI	CCNGG	3 cut(s)	437, 1034, 1349
BmsI	GCATC	2 cut(s)	858, 1078
BmtI	GCTAGC	1 cut(s)	428
BpiI	GAAGAC	2 cut(s)	773, 1581
BplI	GAGNNNNNCTC	2 cut(s)	119, 151
BpuEI	CTTGAG	1 cut(s)	1027
BsaAI	YACGTR	1 cut(s)	857
BsaBI	GATNNNNATC	1 cut(s)	687
BsaHI	GRCGYC	1 cut(s)	160
BsaJI	CCNNGG	3 cut(s)	188, 1175, 1386
BsaWI	WCCGGW	1 cut(s)	1243
BsaXI	ACNNNNNCTCC	2 cut(s)	1426, 1456
Bsc4I	CCNNNNNNNGG	5 cut(s)	189, 755, 1024, 1243, 1414
Bse1I	ACTGG	1 cut(s)	1208
Bse21I	CCTNAGG	1 cut(s)	678
Bse3DI	GCAATG	1 cut(s)	40
Bse8I	GATNNNNATC	1 cut(s)	687
BseBI	CCWGG	3 cut(s)	437, 1034, 1349
BseDI	CCNNGG	3 cut(s)	188, 1175, 1386
BseJI	GATNNNNATC	1 cut(s)	687
BseLI	CCNNNNNNNGG	5 cut(s)	189, 755, 1024, 1243, 1414
BseMI	GCAATG	1 cut(s)	40
BseMII	CTCAG	2 cut(s)	465, 669
BseNI	ACTGG	1 cut(s)	1208
BseRI	GAGGAG	3 cut(s)	237, 537, 998
BseXI	GCAGC	8 cut(s)	160, 283, 594, 694, 716, 1344, 1483, 1530
BsgI	GTGCAG	2 cut(s)	601, 1343
Bsh1236I	CGCG	1 cut(s)	1177
BshFI	GGCC	4 cut(s)	416, 640, 936, 1407
BshNI	GGYRCC	2 cut(s)	159, 394
BsiHKAI	GWGCWC	1 cut(s)	990
BsiSI	CCGG	2 cut(s)	835, 1244
BslFI	GGGAC	1 cut(s)	1159
BslI	CCNNNNNNNGG	5 cut(s)	189, 755, 1024, 1243, 1414
BsmAI	GTCTC	2 cut(s)	993, 1429
BsmFI	GGGAC	1 cut(s)	1159
BsmI	GAATGC	2 cut(s)	1588, 1600
BsnI	GGCC	4 cut(s)	416, 640, 936, 1407
Bsp1286I	GDGCHC	1 cut(s)	990
Bsp143I	GATC	4 cut(s)	273, 334, 813, 1391
BspACI	CCGC	3 cut(s)	1175, 1177, 1521
BspANI	GGCC	4 cut(s)	416, 640, 936, 1407
BspCNI	CTCAG	2 cut(s)	464, 670
BspFNI	CGCG	1 cut(s)	1177
BspHI	TCATGA	2 cut(s)	337, 739
BspLI	GGNNCC	3 cut(s)	161, 396, 627
BspMI	ACCTGC	1 cut(s)	1521
BspOI	GCTAGC	1 cut(s)	428
BspPI	GGATC	2 cut(s)	821, 1399
BspQI	GCTCTTC	1 cut(s)	570
BspT107I	GGYRCC	2 cut(s)	159, 394
BsrDI	GCAATG	1 cut(s)	40
BsrI	ACTGG	1 cut(s)	1208
BssECI	CCNNGG	3 cut(s)	188, 1175, 1386
BssMI	GATC	4 cut(s)	273, 334, 813, 1391
BssNI	GRCGYC	1 cut(s)	160
BssT1I	CCWWGG	2 cut(s)	188, 1386
Bst2UI	CCWGG	3 cut(s)	437, 1034, 1349
Bst4CI	ACNGT	3 cut(s)	772, 941, 1166
Bst6I	CTCTTC	5 cut(s)	57, 142, 570, 838, 897
BstACI	GRCGYC	1 cut(s)	160
BstAPI	GCANNNNNTGC	1 cut(s)	483
BstBAI	YACGTR	1 cut(s)	857
BstC8I	GCNNGC	1 cut(s)	426
BstDEI	CTNAG	2 cut(s)	451, 678
BstDSI	CCRYGG	1 cut(s)	1175
BstENI	CCTNNNNNAGG	1 cut(s)	753
BstFNI	CGCG	1 cut(s)	1177
BstH2I	RGCGCY	1 cut(s)	163
BstHHI	GCGC	1 cut(s)	162
BstKTI	GATC	4 cut(s)	276, 337, 816, 1394
BstMAI	GTCTC	2 cut(s)	993, 1429
BstMBI	GATC	4 cut(s)	273, 334, 813, 1391
BstMWI	GCNNNNNNNGC	5 cut(s)	483, 582, 713, 977, 1527
BstNI	CCWGG	3 cut(s)	437, 1034, 1349
BstNSI	RCATGY	1 cut(s)	350
BstSCI	CCNGG	3 cut(s)	435, 1032, 1347
BstSFI	CTRYAG	2 cut(s)	168, 1293
BstUI	CGCG	1 cut(s)	1177
BstV1I	GCAGC	8 cut(s)	160, 283, 594, 694, 716, 1344, 1483, 1530
BstV2I	GAAGAC	2 cut(s)	773, 1581
BstX2I	RGATCY	2 cut(s)	273, 1391
BstXI	CCANNNNNNTGG	2 cut(s)	408, 1568
BstYI	RGATCY	2 cut(s)	273, 1391
Bsu36I	CCTNAGG	1 cut(s)	678
BsuRI	GGCC	4 cut(s)	416, 640, 936, 1407
BtgI	CCRYGG	1 cut(s)	1175
BtrI	CACGTC	1 cut(s)	1414
BtsI	GCAGTG	1 cut(s)	1068
BtsIMutI	CAGTG	2 cut(s)	946, 1068
BveI	ACCTGC	1 cut(s)	1521
Cac8I	GCNNGC	1 cut(s)	426
CciI	TCATGA	2 cut(s)	337, 739
CfoI	GCGC	1 cut(s)	162
Cfr13I	GGNCC	3 cut(s)	1205, 1417, 1533
Cfr42I	CCGCGG	1 cut(s)	1178
Csp6I	GTAC	4 cut(s)	213, 796, 854, 1449
CviQI	GTAC	4 cut(s)	213, 796, 854, 1449
DdeI	CTNAG	2 cut(s)	451, 678
DinI	GGCGCC	1 cut(s)	161
DpnI	GATC	4 cut(s)	275, 336, 815, 1393
DpnII	GATC	4 cut(s)	273, 334, 813, 1391
DraIII	CACNNNGTG	2 cut(s)	878, 1168
DrdI	GACNNNNNNGTC	1 cut(s)	1153
DseDI	GACNNNNNNGTC	1 cut(s)	1153
EaeI	YGGCCR	2 cut(s)	414, 638
Eam1104I	CTCTTC	5 cut(s)	57, 142, 570, 838, 897
EarI	CTCTTC	5 cut(s)	57, 142, 570, 838, 897
Ecl136II	GAGCTC	1 cut(s)	988
Eco130I	CCWWGG	2 cut(s)	188, 1386
Eco24I	GRGCYC	1 cut(s)	990
Eco47I	GGWCC	3 cut(s)	1205, 1417, 1533
Eco53kI	GAGCTC	1 cut(s)	988
Eco81I	CCTNAGG	1 cut(s)	678
EcoICRI	GAGCTC	1 cut(s)	988
EcoNI	CCTNNNNNAGG	1 cut(s)	753
EcoRII	CCWGG	3 cut(s)	435, 1032, 1347
EcoT14I	CCWWGG	2 cut(s)	188, 1386
EcoT38I	GRGCYC	1 cut(s)	990
EgeI	GGCGCC	1 cut(s)	161
EheI	GGCGCC	1 cut(s)	161
ErhI	CCWWGG	2 cut(s)	188, 1386
FalI	AAGNNNNNCTT	4 cut(s)	782, 814, 1046, 1078
FaqI	GGGAC	1 cut(s)	1159
FauI	CCCGC	1 cut(s)	1170
FbaI	TGATCA	1 cut(s)	334
Fnu4HI	GCNGC	9 cut(s)	174, 297, 583, 705, 708, 1358, 1497, 1519, 1522
FriOI	GRGCYC	1 cut(s)	990
Fsp4HI	GCNGC	9 cut(s)	174, 297, 583, 705, 708, 1358, 1497, 1519, 1522
FspBI	CTAG	7 cut(s)	425, 645, 711, 896, 1133, 1158, 1409
GlaI	GCGC	1 cut(s)	161
GluI	GCNGC	9 cut(s)	174, 297, 583, 705, 708, 1358, 1497, 1519, 1522
HaeII	RGCGCY	1 cut(s)	163
HaeIII	GGCC	4 cut(s)	416, 640, 936, 1407
HapII	CCGG	2 cut(s)	835, 1244
HhaI	GCGC	1 cut(s)	162
Hin1I	GRCGYC	1 cut(s)	160
Hin6I	GCGC	1 cut(s)	160
HinP1I	GCGC	1 cut(s)	160
HinfI	GANTC	5 cut(s)	128, 632, 725, 743, 848
HpaII	CCGG	2 cut(s)	835, 1244
HphI	GGTGA	6 cut(s)	34, 374, 598, 890, 1550, 1583
Hpy166II	GTNNAC	3 cut(s)	1345, 1417, 1558
Hpy188I	TCNGA	3 cut(s)	237, 673, 693
Hpy188III	TCNNGA	9 cut(s)	338, 629, 645, 722, 740, 962, 1006, 1158, 1252
Hpy8I	GTNNAC	3 cut(s)	1345, 1417, 1558
HpyAV	CCTTC	4 cut(s)	91, 455, 901, 1465
HpyCH4III	ACNGT	3 cut(s)	772, 941, 1166
HpyCH4IV	ACGT	2 cut(s)	856, 1413
HpyF10VI	GCNNNNNNNGC	5 cut(s)	483, 582, 713, 977, 1527
HpyF3I	CTNAG	2 cut(s)	451, 678
HpySE526I	ACGT	2 cut(s)	856, 1413
Hsp92I	GRCGYC	1 cut(s)	160
HspAI	GCGC	1 cut(s)	160
KasI	GGCGCC	1 cut(s)	159
Ksp22I	TGATCA	1 cut(s)	334
KspI	CCGCGG	1 cut(s)	1178
Kzo9I	GATC	4 cut(s)	273, 334, 813, 1391
LguI	GCTCTTC	1 cut(s)	570
LmnI	GCTCC	2 cut(s)	250, 985
Lsp1109I	GCAGC	8 cut(s)	160, 283, 594, 694, 716, 1344, 1483, 1530
LweI	GCATC	2 cut(s)	858, 1078
MaeI	CTAG	7 cut(s)	425, 645, 711, 896, 1133, 1158, 1409
MaeII	ACGT	2 cut(s)	856, 1413
MalI	GATC	4 cut(s)	275, 336, 815, 1393
MboI	GATC	4 cut(s)	273, 334, 813, 1391
MflI	RGATCY	2 cut(s)	273, 1391
MhlI	GDGCHC	1 cut(s)	990
MlsI	TGGCCA	2 cut(s)	416, 640
MluCI	AATT	7 cut(s)	648, 667, 717, 1037, 1149, 1256, 1301
MluNI	TGGCCA	2 cut(s)	416, 640
Mly113I	GGCGCC	1 cut(s)	160
MlyI	GAGTC	3 cut(s)	137, 734, 737
MmeI	TCCRAC	1 cut(s)	138
Mox20I	TGGCCA	2 cut(s)	416, 640
MroXI	GAANNNNTTC	1 cut(s)	847
MscI	TGGCCA	2 cut(s)	416, 640
MseI	TTAA	4 cut(s)	306, 473, 828, 1230
MslI	CAYNNNNRTG	3 cut(s)	351, 406, 1365
Msp20I	TGGCCA	2 cut(s)	416, 640
MspA1I	CMGCKG	5 cut(s)	173, 707, 950, 1177, 1521
MspI	CCGG	2 cut(s)	835, 1244
MspR9I	CCNGG	3 cut(s)	437, 1034, 1349
Mva1269I	GAATGC	2 cut(s)	1588, 1600
MvaI	CCWGG	3 cut(s)	437, 1034, 1349
MvnI	CGCG	1 cut(s)	1177
MwoI	GCNNNNNNNGC	5 cut(s)	483, 582, 713, 977, 1527
NarI	GGCGCC	1 cut(s)	160
NdeII	GATC	4 cut(s)	273, 334, 813, 1391
NheI	GCTAGC	1 cut(s)	424
NlaIV	GGNNCC	3 cut(s)	161, 396, 627
NspI	RCATGY	1 cut(s)	350
PagI	TCATGA	2 cut(s)	337, 739
PciI	ACATGT	1 cut(s)	346
PciSI	GCTCTTC	1 cut(s)	570
PctI	GAATGC	2 cut(s)	1588, 1600
PdmI	GAANNNNTTC	1 cut(s)	847
PfeI	GAWTC	2 cut(s)	632, 848
PkrI	GCNGC	9 cut(s)	175, 298, 584, 706, 709, 1359, 1498, 1520, 1523
PleI	GAGTC	3 cut(s)	136, 733, 737
PluTI	GGCGCC	1 cut(s)	163
PpsI	GAGTC	3 cut(s)	136, 733, 737
Ppu21I	YACGTR	1 cut(s)	857
PscI	ACATGT	1 cut(s)	346
PshBI	ATTAAT	1 cut(s)	306
Psp124BI	GAGCTC	1 cut(s)	990
Psp6I	CCWGG	3 cut(s)	435, 1032, 1347
PspGI	CCWGG	3 cut(s)	435, 1032, 1347
PspN4I	GGNNCC	3 cut(s)	161, 396, 627
PspPI	GGNCC	3 cut(s)	1205, 1417, 1533
PsuI	RGATCY	2 cut(s)	273, 1391
PvuII	CAGCTG	3 cut(s)	173, 707, 950
RsaI	GTAC	4 cut(s)	214, 797, 855, 1450
RsaNI	GTAC	4 cut(s)	213, 796, 854, 1449
RseI	CAYNNNNRTG	3 cut(s)	351, 406, 1365
SacI	GAGCTC	1 cut(s)	990
SacII	CCGCGG	1 cut(s)	1178
SapI	GCTCTTC	1 cut(s)	570
SaqAI	TTAA	4 cut(s)	306, 473, 828, 1230
SatI	GCNGC	9 cut(s)	174, 297, 583, 705, 708, 1358, 1497, 1519, 1522
Sau3AI	GATC	4 cut(s)	273, 334, 813, 1391
Sau96I	GGNCC	3 cut(s)	1205, 1417, 1533
ScaI	AGTACT	1 cut(s)	797
SchI	GAGTC	3 cut(s)	137, 734, 737
ScrFI	CCNGG	3 cut(s)	437, 1034, 1349
SduI	GDGCHC	1 cut(s)	990
SfaNI	GCATC	2 cut(s)	858, 1078
SfcI	CTRYAG	2 cut(s)	168, 1293
SfoI	GGCGCC	1 cut(s)	161
Sfr303I	CCGCGG	1 cut(s)	1178
SgrBI	CCGCGG	1 cut(s)	1178
SinI	GGWCC	3 cut(s)	1205, 1417, 1533
SmiMI	CAYNNNNRTG	3 cut(s)	351, 406, 1365
SmlI	CTYRAG	1 cut(s)	1006
SmoI	CTYRAG	1 cut(s)	1006
Sse9I	AATT	7 cut(s)	648, 667, 717, 1037, 1149, 1256, 1301
SsiI	CCGC	3 cut(s)	1175, 1177, 1521
SspDI	GGCGCC	1 cut(s)	159
SspI	AATATT	1 cut(s)	600
SspMI	CTAG	7 cut(s)	425, 645, 711, 896, 1133, 1158, 1409
SstI	GAGCTC	1 cut(s)	990
StyD4I	CCNGG	3 cut(s)	435, 1032, 1347
StyI	CCWWGG	2 cut(s)	188, 1386
TaaI	ACNGT	3 cut(s)	772, 941, 1166
TaiI	ACGT	2 cut(s)	859, 1416
TaqI	TCGA	2 cut(s)	764, 1219
TasI	AATT	7 cut(s)	648, 667, 717, 1037, 1149, 1256, 1301
TatI	WGTACW	1 cut(s)	795
TauI	GCSGC	1 cut(s)	1524
TfiI	GAWTC	2 cut(s)	632, 848
Tru1I	TTAA	4 cut(s)	306, 473, 828, 1230
Tru9I	TTAA	4 cut(s)	306, 473, 828, 1230
TscAI	CASTG	2 cut(s)	946, 1075
TseI	GCWGC	8 cut(s)	173, 296, 582, 704, 707, 1357, 1496, 1518
TspRI	CASTG	2 cut(s)	946, 1075
VpaK11BI	GGWCC	3 cut(s)	1205, 1417, 1533
VspI	ATTAAT	1 cut(s)	306
XagI	CCTNNNNNAGG	1 cut(s)	753
XapI	RAATTY	2 cut(s)	667, 1256
XbaI	TCTAGA	2 cut(s)	644, 1157
XceI	RCATGY	1 cut(s)	350
XmnI	GAANNNNTTC	1 cut(s)	847
XspI	CTAG	7 cut(s)	425, 645, 711, 896, 1133, 1158, 1409
ZrmI	AGTACT	1 cut(s)	797

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.