Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0017751

Physical Location & Seq

Genomic Coordinates Forward (+)

1743065 .. 1745118

Gene Structure 2054 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0027100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1404 bp

ATGACTACCAAATCCATCCAAGAGCTTCTCAATCTCCTCAATCCTCCTCCCTCCTCCTCCGCCGTCAAGCCCGATATTCCGGCCACGACCGCCCGCCCTCCTCCACCGCCGCCGACGACCTCCGACGCCGACGCCGACACCATCTTCATCCCCAGCTACTCCAGCTGGTTCTCCTTCGACCGCGTCTACCAAACCGAGCGCCGATCCCTCCCGGAATTCTTCAACTCCCGCTCGCCGGCCAAAAACCCTAACCTCTACAAGTACTACCGCAACCACATCATCAAGCACTACCGCTCCAACCCCGGCCGCCGCCTCACTTTCACCGACGTCCGCAAAACCCTAGTCGGCGACGTCGGCTCCATTCACAGGGTCTTCAATTTCCTCGAGGCTTGGGGTTTGATCAATTACGCTCCCTCGATCAAGTCGCTGAAATGGGAGGAGAAGGACGCGAAGTCCGCCGCCGCGCACGGCGGCGGCGCTCAGTCACCGAAGCCCGGTCCGAAAGACGCTTCTGCCCCTAACAAGGACAAGAAGAGGACCTGCAATGGCTGCAAGTCTCTCTGCAGCATTGCCTGCTTTGTTTCCGAAAAGTATGATATGACTCTATGTGCAAGATGTTATGTTCGTGGGAACTATCAGATTGGTGTGAATTCTTCGGATTTTAGAAGGGTTGAGATTAATGAGGAGACTGGGGATGGTTGGGCAGATAGAGACACATTGCATTTGCTAGAAGCACTCATGCATTATGGTGATGATTGGGGGAAGGTTGCACAACATGTTGGTAGAAGCGAGAAGGAATGTGTGGCTCACTTCCTCAAGCTTCCTTTTGCTGATAAACCGATAGATGATTTGGATTCCGAGAAGTTGGATGGTAGTGGTGTGAGTCCGTTGAAGGAGGGGAATGGGGATGATGAGGTTGGTTGGGAGAGTAAGAGGATGCGTCTCACGCCTCTTGCAGATGCCAGCAACCCGATCATGGCTCAGACTGCGTTTCTGTCTGCTTTGGCGGGTGTAAAGGCTGCAGAAGCTGCTGCTCGTGCTGCTGTGACAACCCTGTGTGAGGCGGATTATGAAACAAGTAGGATGAGTGTTGGACCTCGGGGGGTGAGTGGGGGTGATGCTGTGTCGAATGGAGACACTGAAGCTAGACTGAATGCAATGGGAGGCGCTTTTGTGGATGCGAATTCGGAGCTGGAGAAGGAGGGGCTGGGTGTGGAGAGAGCAATTGCTGGGATTACAGAGGTGCAGATGAAAGAGATTCAAGATAGGATTGTTCGTTTCGAGGAATTAGATTTGCAGTTGGAGAAAGAAAAGCAACAACTGGAGCAAATGAAATCAATGCTGTTTGTGGATCAGCTTACGCTTTTGTCTCATAAGAGATCTGCACCTAAAACCAAAAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

467

Amino Acids

51.47

Weight (kDa)

6.36

Isoelectric Point (pI)

42.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	58 - 136	1.5e-23	SWIRM domain
Myb_DNA-binding	PF00249	234 - 274	1.9e-07	Myb-like DNA-binding domain
SWIRM-assoc_1	PF16495	403 - 464	5.4e-07	SWIRM-associated region 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017751)

Species	Orthologous Gene IDs
prunus_persica	Prupe.4G088400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0015391 RchiOBHm_Chr5g0015401
rosa_multiflora	Rmu_sc0001591.1_g000001 Rmu_sc0001591.1_g000002 Rmu_sc0007708.1_g000003
rosa_rugosa	Rorug05G0027100 Rorug05G0027200
rosa_samantha	Rh5BG119600 Rh5CG130200 Rh5CG130300 Rh5DG118700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	330, 354
AbsI	CCTCGAGG	1 cut(s)	383
Acc36I	ACCTGC	1 cut(s)	548
AccBSI	CCGCTC	2 cut(s)	231, 294
AccI	GTMKAC	1 cut(s)	186
AccII	CGCG	3 cut(s)	183, 449, 464
AclWI	GGATC	2 cut(s)	198, 1359
AcoI	YGGCCR	3 cut(s)	81, 237, 304
AcsI	RAATTY	3 cut(s)	215, 649, 1183
AcuI	CTGAAG	1 cut(s)	1161
AcyI	GRCGYC	4 cut(s)	126, 132, 327, 351
AfaI	GTAC	1 cut(s)	263
AfiI	CCNNNNNNNGG	6 cut(s)	235, 366, 494, 523, 976, 1060
AflIII	ACRYGT	1 cut(s)	775
AgsI	TTSAA	4 cut(s)	223, 376, 892, 1262
AhdI	GACNNNNNGTC	1 cut(s)	451
AluBI	AGCT	9 cut(s)	25, 156, 165, 820, 1028, 1145, 1192, 1357, 1401
AluI	AGCT	9 cut(s)	25, 156, 165, 820, 1028, 1145, 1192, 1357, 1401
Alw26I	GTCTC	6 cut(s)	561, 680, 705, 947, 1128, 1374
AlwI	GGATC	2 cut(s)	198, 1359
AlwNI	CAGNNNCTG	1 cut(s)	1028
Ama87I	CYCGRG	2 cut(s)	383, 1098
AoxI	GGCC	3 cut(s)	81, 237, 304
ApeKI	GCWGC	6 cut(s)	549, 564, 1019, 1028, 1031, 1040
ApoI	RAATTY	3 cut(s)	215, 649, 1183
ArsI	GACNNNNNNTTYG	2 cut(s)	327, 359
AseI	ATTAAT	1 cut(s)	678
AspLEI	GCGC	4 cut(s)	201, 466, 479, 1169
AspS9I	GGNCC	3 cut(s)	497, 537, 1094
AsuC2I	CCSGG	3 cut(s)	212, 303, 495
AsuHPI	GGTGA	5 cut(s)	313, 477, 761, 1117, 1127
AvaI	CYCGRG	2 cut(s)	383, 1098
AvaII	GGWCC	3 cut(s)	497, 537, 1094
BauI	CACGAG	1 cut(s)	1035
BbsI	GAAGAC	1 cut(s)	364
BbvI	GCAGC	6 cut(s)	536, 576, 1006, 1015, 1018, 1027
BccI	CCATC	4 cut(s)	23, 149, 689, 863
BceAI	ACGGC	2 cut(s)	47, 484
BclI	TGATCA	1 cut(s)	399
BcnI	CCSGG	3 cut(s)	212, 303, 495
BcoDI	GTCTC	6 cut(s)	561, 680, 705, 947, 1128, 1374
BfaI	CTAG	4 cut(s)	341, 728, 1146, 1402
BfmI	CTRYAG	2 cut(s)	562, 1020
BfoI	RGCGCY	3 cut(s)	202, 480, 1170
BfuAI	ACCTGC	1 cut(s)	548
BglII	AGATCT	1 cut(s)	1379
BmcAI	AGTACT	1 cut(s)	263
Bme1390I	CCNGG	3 cut(s)	212, 303, 495
Bme18I	GGWCC	3 cut(s)	497, 537, 1094
BmeRI	GACNNNNNGTC	1 cut(s)	451
BmeT110I	CYCGRG	2 cut(s)	383, 1098
BmgT120I	GGNCC	3 cut(s)	497, 537, 1094
BmiI	GGNNCC	1 cut(s)	358
BmrFI	CCNGG	3 cut(s)	212, 303, 495
BmrI	ACTGGG	1 cut(s)	699
BmsI	GCATC	4 cut(s)	927, 949, 1108, 1168
BmuI	ACTGGG	1 cut(s)	699
BpiI	GAAGAC	1 cut(s)	364
BpmI	CTGGAG	3 cut(s)	145, 1214, 1343
BpuEI	CTTGAG	1 cut(s)	800
BpuMI	CCSGG	3 cut(s)	212, 303, 495
BsaHI	GRCGYC	4 cut(s)	126, 132, 327, 351
BsaJI	CCNNGG	2 cut(s)	301, 1097
BsaXI	ACNNNNNCTCC	4 cut(s)	278, 308, 341, 371
Bsc4I	CCNNNNNNNGG	6 cut(s)	235, 366, 494, 523, 976, 1060
Bse118I	RCCGGY	1 cut(s)	235
Bse1I	ACTGG	2 cut(s)	694, 1326
Bse3DI	GCAATG	4 cut(s)	550, 567, 716, 1164
BseDI	CCNNGG	2 cut(s)	301, 1097
BseGI	GGATG	8 cut(s)	15, 147, 700, 874, 913, 942, 1089, 1183
BseLI	CCNNNNNNNGG	6 cut(s)	235, 366, 494, 523, 976, 1060
BseMI	GCAATG	4 cut(s)	550, 567, 716, 1164
BseMII	CTCAG	2 cut(s)	494, 995
BseNI	ACTGG	2 cut(s)	694, 1326
BseRI	GAGGAG	7 cut(s)	26, 36, 43, 46, 90, 452, 698
BseX3I	CGGCCG	1 cut(s)	304
BseXI	GCAGC	6 cut(s)	536, 576, 1006, 1015, 1018, 1027
BseYI	CCCAGC	3 cut(s)	152, 1207, 1229
BsgI	GTGCAG	2 cut(s)	1265, 1368
Bsh1236I	CGCG	3 cut(s)	183, 449, 464
Bsh1285I	CGRYCG	3 cut(s)	90, 181, 307
BshFI	GGCC	3 cut(s)	83, 239, 306
BsiEI	CGRYCG	3 cut(s)	90, 181, 307
BsiHKCI	CYCGRG	2 cut(s)	383, 1098
BsiSI	CCGG	5 cut(s)	80, 212, 236, 303, 495
BslI	CCNNNNNNNGG	6 cut(s)	235, 366, 494, 523, 976, 1060
BsmAI	GTCTC	6 cut(s)	561, 680, 705, 947, 1128, 1374
BsmBI	CGTCTC	1 cut(s)	947
BsmI	GAATGC	1 cut(s)	1159
BsnI	GGCC	3 cut(s)	83, 239, 306
BsoBI	CYCGRG	2 cut(s)	383, 1098
Bsp143I	GATC	6 cut(s)	203, 399, 417, 972, 1351, 1379
BspANI	GGCC	3 cut(s)	83, 239, 306
BspCNI	CTCAG	2 cut(s)	493, 994
BspFNI	CGCG	3 cut(s)	183, 449, 464
BspLI	GGNNCC	1 cut(s)	358
BspMAI	CTGCAG	2 cut(s)	566, 1024
BspMI	ACCTGC	1 cut(s)	548
BspPI	GGATC	2 cut(s)	198, 1359
BsrBI	CCGCTC	2 cut(s)	231, 294
BsrDI	GCAATG	4 cut(s)	550, 567, 716, 1164
BsrFI	RCCGGY	1 cut(s)	235
BsrI	ACTGG	2 cut(s)	694, 1326
BssAI	RCCGGY	1 cut(s)	235
BssECI	CCNNGG	2 cut(s)	301, 1097
BssMI	GATC	6 cut(s)	203, 399, 417, 972, 1351, 1379
BssNI	GRCGYC	4 cut(s)	126, 132, 327, 351
BssSI	CACGAG	1 cut(s)	1035
Bst2BI	CACGAG	1 cut(s)	1035
Bst6I	CTCTTC	1 cut(s)	527
BstACI	GRCGYC	4 cut(s)	126, 132, 327, 351
BstAPI	GCANNNNNTGC	3 cut(s)	549, 573, 1028
BstC8I	GCNNGC	5 cut(s)	94, 233, 237, 574, 964
BstDEI	CTNAG	2 cut(s)	480, 981
BstENI	CCTNNNNNAGG	1 cut(s)	1058
BstF5I	GGATG	8 cut(s)	15, 147, 700, 874, 913, 942, 1089, 1183
BstFNI	CGCG	3 cut(s)	183, 449, 464
BstH2I	RGCGCY	3 cut(s)	202, 480, 1170
BstHHI	GCGC	4 cut(s)	201, 466, 479, 1169
BstKTI	GATC	6 cut(s)	206, 402, 420, 975, 1354, 1382
BstMAI	GTCTC	6 cut(s)	561, 680, 705, 947, 1128, 1374
BstMBI	GATC	6 cut(s)	203, 399, 417, 972, 1351, 1379
BstMCI	CGRYCG	3 cut(s)	90, 181, 307
BstNSI	RCATGY	1 cut(s)	779
BstSCI	CCNGG	3 cut(s)	210, 301, 493
BstSFI	CTRYAG	2 cut(s)	562, 1020
BstUI	CGCG	3 cut(s)	183, 449, 464
BstV1I	GCAGC	6 cut(s)	536, 576, 1006, 1015, 1018, 1027
BstV2I	GAAGAC	1 cut(s)	364
BstX2I	RGATCY	1 cut(s)	1379
BstYI	RGATCY	1 cut(s)	1379
BstZI	CGGCCG	1 cut(s)	304
BsuRI	GGCC	3 cut(s)	83, 239, 306
BtsCI	GGATG	8 cut(s)	15, 147, 700, 874, 913, 942, 1089, 1183
BtsIMutI	CAGTG	1 cut(s)	1137
BveI	ACCTGC	1 cut(s)	548
Cac8I	GCNNGC	5 cut(s)	94, 233, 237, 574, 964
CaiI	CAGNNNCTG	1 cut(s)	1028
CfoI	GCGC	4 cut(s)	201, 466, 479, 1169
Cfr10I	RCCGGY	1 cut(s)	235
Cfr13I	GGNCC	3 cut(s)	497, 537, 1094
CpoI	CGGWCCG	1 cut(s)	497
CseI	GACGC	6 cut(s)	134, 140, 172, 455, 515, 929
Csp6I	GTAC	1 cut(s)	262
CspI	CGGWCCG	1 cut(s)	497
CviAII	CATG	3 cut(s)	739, 776, 976
CviQI	GTAC	1 cut(s)	262
DdeI	CTNAG	2 cut(s)	480, 981
DpnI	GATC	6 cut(s)	205, 401, 419, 974, 1353, 1381
DpnII	GATC	6 cut(s)	203, 399, 417, 972, 1351, 1379
DriI	GACNNNNNGTC	1 cut(s)	451
EaeI	YGGCCR	3 cut(s)	81, 237, 304
EagI	CGGCCG	1 cut(s)	304
Eam1104I	CTCTTC	1 cut(s)	527
Eam1105I	GACNNNNNGTC	1 cut(s)	451
EarI	CTCTTC	1 cut(s)	527
EciI	GGCGGA	3 cut(s)	49, 445, 1079
EclXI	CGGCCG	1 cut(s)	304
Eco47I	GGWCC	3 cut(s)	497, 537, 1094
Eco52I	CGGCCG	1 cut(s)	304
Eco57I	CTGAAG	1 cut(s)	1161
Eco88I	CYCGRG	2 cut(s)	383, 1098
EcoNI	CCTNNNNNAGG	1 cut(s)	1058
EcoO109I	RGGNCCY	1 cut(s)	537
EcoRI	GAATTC	3 cut(s)	215, 649, 1183
EcoT22I	ATGCAT	1 cut(s)	744
Esp3I	CGTCTC	1 cut(s)	947
FaeI	CATG	3 cut(s)	742, 779, 979
FatI	CATG	3 cut(s)	738, 775, 975
FauI	CCCGC	3 cut(s)	101, 236, 1000
FbaI	TGATCA	1 cut(s)	399
FblI	GTMKAC	1 cut(s)	186
FokI	GGATG	8 cut(s)	2, 134, 707, 881, 920, 949, 1096, 1190
FspBI	CTAG	4 cut(s)	341, 728, 1146, 1402
GlaI	GCGC	4 cut(s)	200, 465, 478, 1168
GsaI	CCCAGC	3 cut(s)	156, 1211, 1233
GsuI	CTGGAG	3 cut(s)	145, 1214, 1343
HaeII	RGCGCY	3 cut(s)	202, 480, 1170
HaeIII	GGCC	3 cut(s)	83, 239, 306
HapII	CCGG	5 cut(s)	80, 212, 236, 303, 495
HgaI	GACGC	6 cut(s)	134, 140, 172, 455, 515, 929
HhaI	GCGC	4 cut(s)	201, 466, 479, 1169
Hin1I	GRCGYC	4 cut(s)	126, 132, 327, 351
Hin1II	CATG	3 cut(s)	742, 779, 979
Hin6I	GCGC	4 cut(s)	199, 464, 477, 1167
HinP1I	GCGC	4 cut(s)	199, 464, 477, 1167
HindIII	AAGCTT	1 cut(s)	818
HinfI	GANTC	4 cut(s)	601, 854, 883, 1258
HpaII	CCGG	5 cut(s)	80, 212, 236, 303, 495
HphI	GGTGA	5 cut(s)	313, 477, 761, 1117, 1127
Hpy166II	GTNNAC	1 cut(s)	187
Hpy188I	TCNGA	8 cut(s)	124, 501, 586, 639, 658, 859, 984, 1189
Hpy188III	TCNNGA	1 cut(s)	1262
Hpy8I	GTNNAC	1 cut(s)	187
Hpy99I	CGWCG	6 cut(s)	118, 128, 134, 329, 353, 356
HpyAV	CCTTC	7 cut(s)	184, 436, 660, 757, 787, 886, 1192
HpyCH4IV	ACGT	2 cut(s)	327, 351
HpyF3I	CTNAG	2 cut(s)	480, 981
HpySE526I	ACGT	2 cut(s)	327, 351
Hsp92I	GRCGYC	4 cut(s)	126, 132, 327, 351
Hsp92II	CATG	3 cut(s)	742, 779, 979
HspAI	GCGC	4 cut(s)	199, 464, 477, 1167
KroI	GCCGGC	1 cut(s)	235
KroNI	GCCGGC	1 cut(s)	237
Ksp22I	TGATCA	1 cut(s)	399
Kzo9I	GATC	6 cut(s)	203, 399, 417, 972, 1351, 1379
LmnI	GCTCC	5 cut(s)	299, 362, 415, 1189, 1324
Lsp1109I	GCAGC	6 cut(s)	536, 576, 1006, 1015, 1018, 1027
LweI	GCATC	4 cut(s)	927, 949, 1108, 1168
MaeI	CTAG	4 cut(s)	341, 728, 1146, 1402
MaeII	ACGT	2 cut(s)	327, 351
MaeIII	GTNAC	2 cut(s)	483, 1045
MalI	GATC	6 cut(s)	205, 401, 419, 974, 1353, 1381
MbiI	CCGCTC	2 cut(s)	231, 294
MboI	GATC	6 cut(s)	203, 399, 417, 972, 1351, 1379
MboII	GAAGA	5 cut(s)	136, 211, 364, 544, 645
MfeI	CAATTG	1 cut(s)	1224
MflI	RGATCY	1 cut(s)	1379
MluCI	AATT	7 cut(s)	215, 376, 403, 649, 1183, 1224, 1286
MlyI	GAGTC	2 cut(s)	595, 892
MmeI	TCCRAC	5 cut(s)	147, 321, 846, 1072, 1281
Mph1103I	ATGCAT	1 cut(s)	744
MroNI	GCCGGC	1 cut(s)	235
MseI	TTAA	1 cut(s)	678
MslI	CAYNNNNRTG	1 cut(s)	747
MspA1I	CMGCKG	1 cut(s)	165
MspI	CCGG	5 cut(s)	80, 212, 236, 303, 495
MspR9I	CCNGG	3 cut(s)	212, 303, 495
MunI	CAATTG	1 cut(s)	1224
Mva1269I	GAATGC	1 cut(s)	1159
MvnI	CGCG	3 cut(s)	183, 449, 464
NaeI	GCCGGC	1 cut(s)	237
NciI	CCSGG	3 cut(s)	212, 303, 495
NdeII	GATC	6 cut(s)	203, 399, 417, 972, 1351, 1379
NgoMIV	GCCGGC	1 cut(s)	235
NlaIII	CATG	3 cut(s)	742, 779, 979
NlaIV	GGNNCC	1 cut(s)	358
NmuCI	GTSAC	2 cut(s)	483, 1045
NsiI	ATGCAT	1 cut(s)	744
NspI	RCATGY	1 cut(s)	779
PaeR7I	CTCGAG	1 cut(s)	383
PciI	ACATGT	1 cut(s)	775
PcsI	WCGNNNNNNNCGW	1 cut(s)	132
PctI	GAATGC	1 cut(s)	1159
PdiI	GCCGGC	1 cut(s)	237
PfeI	GAWTC	2 cut(s)	854, 1258
PflFI	GACNNNGTC	1 cut(s)	182
PfoI	TCCNGGA	1 cut(s)	210
PleI	GAGTC	2 cut(s)	595, 891
PpsI	GAGTC	2 cut(s)	595, 891
PpuMI	RGGWCCY	1 cut(s)	537
PscI	ACATGT	1 cut(s)	775
PshBI	ATTAAT	1 cut(s)	678
Psp5II	RGGWCCY	1 cut(s)	537
PspFI	CCCAGC	3 cut(s)	152, 1207, 1229
PspN4I	GGNNCC	1 cut(s)	358
PspPI	GGNCC	3 cut(s)	497, 537, 1094
PspPPI	RGGWCCY	1 cut(s)	537
PspXI	VCTCGAGB	1 cut(s)	383
PstI	CTGCAG	2 cut(s)	566, 1024
PstNI	CAGNNNCTG	1 cut(s)	1028
PsuI	RGATCY	1 cut(s)	1379
PsyI	GACNNNGTC	1 cut(s)	182
PvuII	CAGCTG	1 cut(s)	165
RsaI	GTAC	1 cut(s)	263
RsaNI	GTAC	1 cut(s)	262
RseI	CAYNNNNRTG	1 cut(s)	747
Rsr2I	CGGWCCG	1 cut(s)	497
RsrII	CGGWCCG	1 cut(s)	497
SaqAI	TTAA	1 cut(s)	678
Sau3AI	GATC	6 cut(s)	203, 399, 417, 972, 1351, 1379
Sau96I	GGNCC	3 cut(s)	497, 537, 1094
ScaI	AGTACT	1 cut(s)	263
SchI	GAGTC	2 cut(s)	595, 892
ScrFI	CCNGG	3 cut(s)	212, 303, 495
SfaNI	GCATC	4 cut(s)	927, 949, 1108, 1168
SfcI	CTRYAG	2 cut(s)	562, 1020
Sfr274I	CTCGAG	1 cut(s)	383
SinI	GGWCC	3 cut(s)	497, 537, 1094
SlaI	CTCGAG	1 cut(s)	383
SmiMI	CAYNNNNRTG	1 cut(s)	747
SmlI	CTYRAG	2 cut(s)	383, 815
SmoI	CTYRAG	2 cut(s)	383, 815
Sse9I	AATT	7 cut(s)	215, 376, 403, 649, 1183, 1224, 1286
SspMI	CTAG	4 cut(s)	341, 728, 1146, 1402
StyD4I	CCNGG	3 cut(s)	210, 301, 493
TaiI	ACGT	2 cut(s)	330, 354
TaqI	TCGA	5 cut(s)	177, 384, 416, 1127, 1281
TasI	AATT	7 cut(s)	215, 376, 403, 649, 1183, 1224, 1286
TatI	WGTACW	1 cut(s)	261
TauI	GCSGC	7 cut(s)	112, 309, 312, 461, 464, 474, 477
TfiI	GAWTC	2 cut(s)	854, 1258
Tru1I	TTAA	1 cut(s)	678
Tru9I	TTAA	1 cut(s)	678
TscAI	CASTG	1 cut(s)	1144
TseFI	GTSAC	2 cut(s)	483, 1045
TseI	GCWGC	6 cut(s)	549, 564, 1019, 1028, 1031, 1040
Tsp45I	GTSAC	2 cut(s)	483, 1045
TspDTI	ATGAA	4 cut(s)	136, 1086, 1265, 1346
TspGWI	ACGGA	1 cut(s)	876
TspRI	CASTG	1 cut(s)	1144
Tth111I	GACNNNGTC	1 cut(s)	182
VpaK11BI	GGWCC	3 cut(s)	497, 537, 1094
VspI	ATTAAT	1 cut(s)	678
XagI	CCTNNNNNAGG	1 cut(s)	1058
XapI	RAATTY	3 cut(s)	215, 649, 1183
XceI	RCATGY	1 cut(s)	779
XhoI	CTCGAG	1 cut(s)	383
XmiI	GTMKAC	1 cut(s)	186
XspI	CTAG	4 cut(s)	341, 728, 1146, 1402
ZraI	GACGTC	2 cut(s)	328, 352
ZrmI	AGTACT	1 cut(s)	263
Zsp2I	ATGCAT	1 cut(s)	744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.