Rorug05G0027200

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0017751
Physical Location & Seq
Reverse (-)
1748560 .. 1751540
2981 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0027200.1

Sequence Viewer

Length: 2895 bp
ATGGCTGAAGCACTCATCTTGATGCTTCTAGAGAAATTGGCTTCTGTAACTTTTCAACTCACAGAAAAAGAGGTGAGGCTGGTTTTGGATGTTGAGAAAGAAGTTGAAGAATTCTCTGGAAATCTTGAAGCAATTCAAGCTGTGCTTGAGGATGCAGAGCAGAAGCAAGTCAAGGATGCAAGCGTGAGGAATTGGTTGGATAAGCTGAAGGAAGTGTCCTTTAAGATGGATGACGTGCTGGATGAGTGGAACACTGAAATTCTGAGACAAAAAGTTGAGAGTCAAGAAACACACAATGAAACTGCTCTTGTTACCAAGAAGAAGGTATGGATCTCTATACCCTCTCATTGCTTTTGTTTTGGACAAGTCAGTAGGGTAATTCTTCGTCGTGATATTGCACTCATCATAAAAGATCTGAATGATAAGCTAACTGTCATTGCTAATCAAAGGCAAGCATATAACTTGCAATCCATAGAAAGAAGTGCGGAACAACCTGAGCGAAAGAAGAGTTCATCTTTTGTTGATATATCCAAAGTTTTTGGTCGTGACAATGAAAAAGATATTTTGATAAGCAGATTGTTGAGTGAGAATAGTCAAGAAGAGAAGGCGCTCCTTGTCATCCCTATCATAGGCATGGGAGGAGTTGGTAAGACAACTCTTACCCAACTAGTGTATAATGATGAAAATGTTAAATCCCATTTTGAGATGAGAATATGGGTTTGTGTCTCAGACCCTTTTGATGAGATCAAGATTGCCAAAGCCATTACTGATGGTAATGGTGTTTCAAATTCAGATGAGTTAGAAGCTGTCTTGCAATGCATGTCTAAATCCATTGAGGGGAAAAAGTTTCTCCTTGTCCTAGATGATGTATGGACCCAAAATCATACAAAGTGGGAACAATTAGAGTTACCTTTAATGCAGAATTGTGGTAAAGGTAGTAGAATAATTGTGACCACAAGAAAAGAGGAGGTCGCTATTATGATGGGAGCAACCCCTCACATGATGCACTTGAAGCAGTTGAGTATGCAAAATTGCTTGTCATTGTTCAATCACATTGTGTTTCTTGATAGGAAAGAGGATGAGTCTACTGTCTTCCGAGCTATTGGTGAGGGAATTGTGAAAAAATGTAAGGGTTTGCCACTTGCTGCAAAGACTTTGGCGAGTCTCATGCGCTATAAGAAGACGATGAAAGAGTGGCAAGATGTTTTGGACAGTAAGATTTGGGATATAGAAGGGTTTGAGCAACAAGTTTTTCAACCACTTTTTCTCAGTTATCATGATTTGGCCCCTGCTGTCAGACGTTGTCTGTTATACTGTGCTGCTTTTCCAAAAGATTATGTGTTTGATAAAAATATCTTGATTGAGCTCTGGATGTCACAAGACTATCTTCATTCAAGAGGGAACCATGAAAAAGAAGTCGTTGGTCAGATCTTTTTTGATAACTTAGTAAGGCGCTCTTTCTTCCAAGATCTTGTGGATGATGAGTTTGACATGCTTACTGTGCGTTGCAAAATGCATGATATTGTTCATGACTTTGTGCAGTCCCTCACTGAGAAAGAGTGTGTCATTATGGAGTTATCTGGTGCTAACAACAAAAAAGAGCCACTAGTGAGTAATAAGTTGCGCCATTTCACCTTAATGTCTGCACCTGAGTTCCCATCTTCTATGTCATCTCAGAATTACAAGAATCTGCGTACTCTCACAACTTTTAATTGCAAAATTTCTGCCATAGACTTGAAGTTAATTTCAGAACTGAGATGTCTAAGAACATTAAATTTGAGTCACAATGGCCTCCAAGAGCTTCCACAGAACATTGGTGATTTGATACATTTGAGGTATCTTGACTTGTCTTTTAATCGTTCTTTGAAGAAATTACCCACCACTTTAGGTAATTTATTCAATCTGCAAACCTTGCGCCTTCTGCGCTGCAGGGCACTTAAAGAACTCCCTAAGAGCATGGGAAAGCTGATTAACCTGAGACATCTTTACATTCAGTTTTGTGATCAGCTGAAGTACTTGCCAAAAGGGATTGGCAGATTAACAAGCTTGCAAACACTAGACATGTGCCCTGTTTATGGCAGTGAAGATGATGAAGCATTCAAGTTGGGGGATTTGGGAAGCTTGGATCAGCTTCAGGGTGCTCTCACCATAAAAGTTTTGGGGGATTGGAAGGATGCAAATGAGGCTGAGAATGCCCGTTTGTGGAATAAAAAACAACTTTTTTATTTGGGAGTTGATACTTCCGATGACAACATGTGTAGAAAAAGCAATGTGAAGATTTTGAATCTCTTACGACCACATCAAGATTTAAATTCTTTAGAGATTTCTGTGTATGATGGCACCACCTGGCCTAATTGGATAATGTCTTTGTATAATTTGAGAGTACTTAGTCTTGATTCTTGTGCGTGTGAGTTTTTGCCTCCTCTTGGGAAATTGCCATTCCTTGAGAAGCTGTCAGTGAGCTATATGGCAAGACTGAAAAAGGTTGGAGTTGAATTTCTGGGAATAGAAGAAGCTCAAACGTCAATGAAATCATCTAAACGTACTGTTTTGTTCCCAAAATTAAAACAACTCCTGTTTTGGCGATTGGTGAAGTTGGAAGAGTGGAACGGAATGGAAGGGTGGAAAGAAGAAGATTCTGACATTACAATAATGCCATGCCTTTCTAGCTTAAGAATTATGGACTGCAGCAATTTGAGGCTTCTGCCAGACTTCTTGCAAAGATCGCAACTGCAGAGTCTTGAAATCATTGGAAGTTGGATTCTTGCCAGATGTTGTGAAGAAGGCAGAGGAAGGGAGTGGCCCAAGATCTCTCATATCCCAAACATCAAAGTTGAATACCCCATTAATGATTTCAGGGCAATTGCAACTCGTGGCTATATCCATCTTCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

964

Amino Acids

110.93

Weight (kDa)

6.49

Isoelectric Point (pI)

46.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 11 - 96 3.5e-22 Rx N-terminal domain
NB-ARC PF00931 185 - 356 4.2e-33 NB-ARC domain
WHD_DRP PF23559 442 - 513 6.6e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 564 - 896 4.3e-33 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 702 - 823 5.6e-26 R13L1/DRL21 LRRs
LRR_RPS2 PF23247 789 - 916 2.1e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2339
AccI GTMKAC 1 cut(s) 1085
AciI CCGC 1 cut(s) 485
AclWI GGATC 2 cut(s) 338, 2133
AcsI RAATTY 7 cut(s) 110, 258, 787, 1719, 1774, 2311, 2495
AcuI CTGAAG 4 cut(s) 27, 227, 2030, 2117
AdeI CACNNNGTG 1 cut(s) 1057
AfaI GTAC 4 cut(s) 1696, 2015, 2385, 2545
AfiI CCNNNNNNNGG 5 cut(s) 629, 837, 2075, 2202, 2426
AflII CTTAAG 1 cut(s) 2671
AflIII ACRYGT 2 cut(s) 2061, 2253
AhlI ACTAGT 2 cut(s) 667, 1606
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 1 cut(s) 2345
Alw21I GWGCWC 2 cut(s) 1368, 2143
Alw26I GTCTC 4 cut(s) 259, 730, 1169, 1972
AlwI GGATC 2 cut(s) 338, 2133
AoxI GGCC 4 cut(s) 1284, 1789, 2348, 2801
ApeKI GCWGC 4 cut(s) 1145, 1319, 1926, 2688
ApoI RAATTY 7 cut(s) 110, 258, 787, 1719, 1774, 2311, 2495
AseI ATTAAT 1 cut(s) 2847
Asp700I GAANNNNTTC 1 cut(s) 132
AspLEI GCGC 6 cut(s) 610, 1173, 1455, 1626, 1917, 1926
AspS9I GGNCC 3 cut(s) 873, 1285, 2802
AsuHPI GGTGA 6 cut(s) 85, 1118, 1624, 1829, 2137, 2602
AvaII GGWCC 1 cut(s) 873
BaeGI GKGCMC 2 cut(s) 1936, 2069
BanI GGYRCC 1 cut(s) 2339
BanII GRGCYC 1 cut(s) 1368
BauI CACGAG 1 cut(s) 2871
BbsI GAAGAC 2 cut(s) 1084, 1187
Bbv12I GWGCWC 2 cut(s) 1368, 2143
BbvI GCAGC 4 cut(s) 1132, 1306, 1913, 2700
BccI CCATC 6 cut(s) 220, 764, 976, 1666, 2330, 2892
BcgI CGANNNNNNTGC 2 cut(s) 1150, 1184
BciT130I CCWGG 1 cut(s) 2347
BclI TGATCA 1 cut(s) 2002
BcoDI GTCTC 4 cut(s) 259, 730, 1169, 1972
BcuI ACTAGT 2 cut(s) 667, 1606
BfaI CTAG 6 cut(s) 29, 668, 860, 1607, 2057, 2667
BfmI CTRYAG 3 cut(s) 1927, 2686, 2732
BfoI RGCGCY 2 cut(s) 611, 1456
BfrI CTTAAG 1 cut(s) 2671
BglII AGATCT 4 cut(s) 412, 1428, 1468, 2808
BisI GCNGC 4 cut(s) 1146, 1320, 1927, 2689
BlsI GCNGC 4 cut(s) 1147, 1321, 1928, 2690
BmcAI AGTACT 2 cut(s) 2015, 2385
Bme1390I CCNGG 1 cut(s) 2347
Bme18I GGWCC 1 cut(s) 873
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 3 cut(s) 873, 1285, 2802
BmiI GGNNCC 4 cut(s) 875, 1287, 1403, 2341
BmrFI CCNGG 1 cut(s) 2347
BmsI GCATC 5 cut(s) 12, 142, 166, 993, 2164
BpiI GAAGAC 2 cut(s) 1084, 1187
Bpu10I CCTNAGC 1 cut(s) 495
BpuEI CTTGAG 2 cut(s) 167, 2465
Bsc4I CCNNNNNNNGG 5 cut(s) 629, 837, 2075, 2202, 2426
Bse3DI GCAATG 4 cut(s) 346, 435, 821, 2275
BseBI CCWGG 1 cut(s) 2347
BseLI CCNNNNNNNGG 5 cut(s) 629, 837, 2075, 2202, 2426
BseMI GCAATG 4 cut(s) 346, 435, 821, 2275
BseRI GAGGAG 3 cut(s) 654, 980, 2412
BseSI GKGCMC 2 cut(s) 1936, 2069
BseXI GCAGC 4 cut(s) 1132, 1306, 1913, 2700
BsgI GTGCAG 2 cut(s) 1559, 1629
BshFI GGCC 4 cut(s) 1286, 1791, 2350, 2803
BshNI GGYRCC 1 cut(s) 2339
BsiHKAI GWGCWC 2 cut(s) 1368, 2143
BslFI GGGAC 1 cut(s) 1528
BslI CCNNNNNNNGG 5 cut(s) 629, 837, 2075, 2202, 2426
BsmAI GTCTC 4 cut(s) 259, 730, 1169, 1972
BsmFI GGGAC 1 cut(s) 1528
BsmI GAATGC 2 cut(s) 2096, 2197
BsnI GGCC 4 cut(s) 1286, 1791, 2350, 2803
Bsp1286I GDGCHC 4 cut(s) 1368, 1936, 2069, 2143
Bsp143I GATC 9 cut(s) 330, 412, 744, 1428, 1468, 2002, 2125, 2723, 2808
BspACI CCGC 1 cut(s) 485
BspANI GGCC 4 cut(s) 1286, 1791, 2350, 2803
BspHI TCATGA 2 cut(s) 1276, 1528
BspLI GGNNCC 4 cut(s) 875, 1287, 1403, 2341
BspMAI CTGCAG 3 cut(s) 1931, 2690, 2736
BspPI GGATC 2 cut(s) 338, 2133
BspT107I GGYRCC 1 cut(s) 2339
BspTI CTTAAG 1 cut(s) 2671
BsrDI GCAATG 4 cut(s) 346, 435, 821, 2275
BssMI GATC 9 cut(s) 330, 412, 744, 1428, 1468, 2002, 2125, 2723, 2808
BssSI CACGAG 1 cut(s) 2871
Bst2BI CACGAG 1 cut(s) 2871
Bst2UI CCWGG 1 cut(s) 2347
Bst4CI ACNGT 6 cut(s) 433, 1090, 1214, 1316, 1501, 2548
Bst6I CTCTTC 3 cut(s) 500, 594, 2595
BstAFI CTTAAG 1 cut(s) 2671
BstAPI GCANNNNNTGC 1 cut(s) 1912
BstC8I GCNNGC 3 cut(s) 181, 453, 2048
BstENI CCTNNNNNAGG 1 cut(s) 627
BstH2I RGCGCY 2 cut(s) 611, 1456
BstHHI GCGC 6 cut(s) 610, 1173, 1455, 1626, 1917, 1926
BstKTI GATC 9 cut(s) 333, 415, 747, 1431, 1471, 2005, 2128, 2726, 2811
BstMAI GTCTC 4 cut(s) 259, 730, 1169, 1972
BstMBI GATC 9 cut(s) 330, 412, 744, 1428, 1468, 2002, 2125, 2723, 2808
BstNI CCWGG 1 cut(s) 2347
BstNSI RCATGY 4 cut(s) 823, 1495, 2065, 2257
BstSCI CCNGG 1 cut(s) 2345
BstSFI CTRYAG 3 cut(s) 1927, 2686, 2732
BstSLI GKGCMC 2 cut(s) 1936, 2069
BstV1I GCAGC 4 cut(s) 1132, 1306, 1913, 2700
BstV2I GAAGAC 2 cut(s) 1084, 1187
BstX2I RGATCY 5 cut(s) 330, 412, 1428, 1468, 2808
BstYI RGATCY 5 cut(s) 330, 412, 1428, 1468, 2808
BsuRI GGCC 4 cut(s) 1286, 1791, 2350, 2803
BtrI CACGTC 1 cut(s) 235
BtsI GCAGTG 1 cut(s) 2086
BtsIMutI CAGTG 4 cut(s) 252, 1548, 2086, 2463
Cac8I GCNNGC 3 cut(s) 181, 453, 2048
CciI TCATGA 2 cut(s) 1276, 1528
CfoI GCGC 6 cut(s) 610, 1173, 1455, 1626, 1917, 1926
Cfr13I GGNCC 3 cut(s) 873, 1285, 2802
Csp6I GTAC 4 cut(s) 1695, 2014, 2384, 2544
CviQI GTAC 4 cut(s) 1695, 2014, 2384, 2544
DpnI GATC 9 cut(s) 332, 414, 746, 1430, 1470, 2004, 2127, 2725, 2810
DpnII GATC 9 cut(s) 330, 412, 744, 1428, 1468, 2002, 2125, 2723, 2808
DraI TTTAAA 1 cut(s) 2310
DraIII CACNNNGTG 1 cut(s) 1057
Eam1104I CTCTTC 3 cut(s) 500, 594, 2595
EarI CTCTTC 3 cut(s) 500, 594, 2595
Ecl136II GAGCTC 1 cut(s) 1366
Eco24I GRGCYC 1 cut(s) 1368
Eco47I GGWCC 1 cut(s) 873
Eco53kI GAGCTC 1 cut(s) 1366
Eco57I CTGAAG 4 cut(s) 27, 227, 2030, 2117
EcoICRI GAGCTC 1 cut(s) 1366
EcoNI CCTNNNNNAGG 1 cut(s) 627
EcoRI GAATTC 1 cut(s) 110
EcoRII CCWGG 1 cut(s) 2345
EcoT22I ATGCAT 2 cut(s) 821, 1518
EcoT38I GRGCYC 1 cut(s) 1368
FalI AAGNNNNNCTT 6 cut(s) 129, 161, 1371, 1403, 1441, 1473
FaqI GGGAC 1 cut(s) 1528
FbaI TGATCA 1 cut(s) 2002
FblI GTMKAC 1 cut(s) 1085
Fnu4HI GCNGC 4 cut(s) 1146, 1320, 1927, 2689
FriOI GRGCYC 1 cut(s) 1368
Fsp4HI GCNGC 4 cut(s) 1146, 1320, 1927, 2689
FspBI CTAG 6 cut(s) 29, 668, 860, 1607, 2057, 2667
GlaI GCGC 6 cut(s) 609, 1172, 1454, 1625, 1916, 1925
GluI GCNGC 4 cut(s) 1146, 1320, 1927, 2689
HaeII RGCGCY 2 cut(s) 611, 1456
HaeIII GGCC 4 cut(s) 1286, 1791, 2350, 2803
HhaI GCGC 6 cut(s) 610, 1173, 1455, 1626, 1917, 1926
Hin6I GCGC 6 cut(s) 608, 1171, 1453, 1624, 1915, 1924
HinP1I GCGC 6 cut(s) 608, 1171, 1453, 1624, 1915, 1924
HindIII AAGCTT 2 cut(s) 2044, 2119
HphI GGTGA 6 cut(s) 85, 1118, 1624, 1829, 2137, 2602
Hpy166II GTNNAC 1 cut(s) 1086
Hpy8I GTNNAC 1 cut(s) 1086
Hpy99I CGWCG 1 cut(s) 390
HpyAV CCTTC 9 cut(s) 202, 316, 598, 1226, 1928, 2164, 2612, 2777, 2787
HpyCH4III ACNGT 6 cut(s) 433, 1090, 1214, 1316, 1501, 2548
HpyCH4IV ACGT 4 cut(s) 234, 1300, 2522, 2542
HpySE526I ACGT 4 cut(s) 234, 1300, 2522, 2542
HspAI GCGC 6 cut(s) 608, 1171, 1453, 1624, 1915, 1924
Ksp22I TGATCA 1 cut(s) 2002
Kzo9I GATC 9 cut(s) 330, 412, 744, 1428, 1468, 2002, 2125, 2723, 2808
LmnI GCTCC 2 cut(s) 615, 986
Lsp1109I GCAGC 4 cut(s) 1132, 1306, 1913, 2700
LweI GCATC 5 cut(s) 12, 142, 166, 993, 2164
MaeI CTAG 6 cut(s) 29, 668, 860, 1607, 2057, 2667
MaeII ACGT 4 cut(s) 234, 1300, 2522, 2542
MaeIII GTNAC 7 cut(s) 46, 310, 545, 906, 949, 1374, 1781
MalI GATC 9 cut(s) 332, 414, 746, 1430, 1470, 2004, 2127, 2725, 2810
MboI GATC 9 cut(s) 330, 412, 744, 1428, 1468, 2002, 2125, 2723, 2808
MfeI CAATTG 1 cut(s) 2862
MflI RGATCY 5 cut(s) 330, 412, 1428, 1468, 2808
MhlI GDGCHC 4 cut(s) 1368, 1936, 2069, 2143
MlyI GAGTC 5 cut(s) 289, 1091, 1171, 1789, 2746
MmeI TCCRAC 4 cut(s) 177, 2467, 2577, 2738
Mph1103I ATGCAT 2 cut(s) 821, 1518
MroXI GAANNNNTTC 1 cut(s) 132
MslI CAYNNNNRTG 3 cut(s) 20, 632, 1637
MspA1I CMGCKG 1 cut(s) 2008
MspCI CTTAAG 1 cut(s) 2671
MspR9I CCNGG 1 cut(s) 2347
MunI CAATTG 1 cut(s) 2862
Mva1269I GAATGC 2 cut(s) 2096, 2197
MvaI CCWGG 1 cut(s) 2347
NdeII GATC 9 cut(s) 330, 412, 744, 1428, 1468, 2002, 2125, 2723, 2808
NlaIV GGNNCC 4 cut(s) 875, 1287, 1403, 2341
NmuCI GTSAC 4 cut(s) 545, 949, 1374, 1781
NsiI ATGCAT 2 cut(s) 821, 1518
NspI RCATGY 4 cut(s) 823, 1495, 2065, 2257
PagI TCATGA 2 cut(s) 1276, 1528
PciI ACATGT 2 cut(s) 2061, 2253
PctI GAATGC 2 cut(s) 2096, 2197
PdmI GAANNNNTTC 1 cut(s) 132
PfeI GAWTC 5 cut(s) 1687, 2284, 2396, 2636, 2761
PflFI GACNNNGTC 1 cut(s) 1302
PkrI GCNGC 4 cut(s) 1147, 1321, 1928, 2690
PleI GAGTC 5 cut(s) 288, 1090, 1170, 1788, 2745
PpsI GAGTC 5 cut(s) 288, 1090, 1170, 1788, 2745
PscI ACATGT 2 cut(s) 2061, 2253
PshBI ATTAAT 1 cut(s) 2847
Psp124BI GAGCTC 1 cut(s) 1368
Psp6I CCWGG 1 cut(s) 2345
PspGI CCWGG 1 cut(s) 2345
PspN4I GGNNCC 4 cut(s) 875, 1287, 1403, 2341
PspPI GGNCC 3 cut(s) 873, 1285, 2802
PstI CTGCAG 3 cut(s) 1931, 2690, 2736
PsuI RGATCY 5 cut(s) 330, 412, 1428, 1468, 2808
PsyI GACNNNGTC 1 cut(s) 1302
PvuII CAGCTG 1 cut(s) 2008
RsaI GTAC 4 cut(s) 1696, 2015, 2385, 2545
RsaNI GTAC 4 cut(s) 1695, 2014, 2384, 2544
RseI CAYNNNNRTG 3 cut(s) 20, 632, 1637
SacI GAGCTC 1 cut(s) 1368
SatI GCNGC 4 cut(s) 1146, 1320, 1927, 2689
Sau3AI GATC 9 cut(s) 330, 412, 744, 1428, 1468, 2002, 2125, 2723, 2808
Sau96I GGNCC 3 cut(s) 873, 1285, 2802
ScaI AGTACT 2 cut(s) 2015, 2385
SchI GAGTC 5 cut(s) 289, 1091, 1171, 1789, 2746
ScrFI CCNGG 1 cut(s) 2347
SduI GDGCHC 4 cut(s) 1368, 1936, 2069, 2143
SfaNI GCATC 5 cut(s) 12, 142, 166, 993, 2164
SfcI CTRYAG 3 cut(s) 1927, 2686, 2732
SinI GGWCC 1 cut(s) 873
SmiI ATTTAAAT 1 cut(s) 2310
SmiMI CAYNNNNRTG 3 cut(s) 20, 632, 1637
SmlI CTYRAG 3 cut(s) 146, 2444, 2671
SmoI CTYRAG 3 cut(s) 146, 2444, 2671
SpeI ACTAGT 2 cut(s) 667, 1606
SsiI CCGC 1 cut(s) 485
SspMI CTAG 6 cut(s) 29, 668, 860, 1607, 2057, 2667
SstI GAGCTC 1 cut(s) 1368
StyD4I CCNGG 1 cut(s) 2345
SwaI ATTTAAAT 1 cut(s) 2310
TaaI ACNGT 6 cut(s) 433, 1090, 1214, 1316, 1501, 2548
TaiI ACGT 4 cut(s) 237, 1303, 2525, 2545
TatI WGTACW 2 cut(s) 2013, 2383
TfiI GAWTC 5 cut(s) 1687, 2284, 2396, 2636, 2761
TscAI CASTG 4 cut(s) 259, 1555, 2086, 2463
TseFI GTSAC 4 cut(s) 545, 949, 1374, 1781
TseI GCWGC 4 cut(s) 1145, 1319, 1926, 2688
Tsp45I GTSAC 4 cut(s) 545, 949, 1374, 1781
TspGWI ACGGA 1 cut(s) 2625
TspRI CASTG 4 cut(s) 259, 1555, 2086, 2463
Tth111I GACNNNGTC 1 cut(s) 1302
Vha464I CTTAAG 1 cut(s) 2671
VpaK11BI GGWCC 1 cut(s) 873
VspI ATTAAT 1 cut(s) 2847
XagI CCTNNNNNAGG 1 cut(s) 627
XapI RAATTY 7 cut(s) 110, 258, 787, 1719, 1774, 2311, 2495
XbaI TCTAGA 1 cut(s) 28
XceI RCATGY 4 cut(s) 823, 1495, 2065, 2257
XcmI CCANNNNNNNNNTGG 1 cut(s) 2155
XmiI GTMKAC 1 cut(s) 1085
XmnI GAANNNNTTC 1 cut(s) 132
XspI CTAG 6 cut(s) 29, 668, 860, 1607, 2057, 2667
ZrmI AGTACT 2 cut(s) 2015, 2385
Zsp2I ATGCAT 2 cut(s) 821, 1518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.