Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0008093

Physical Location & Seq

Genomic Coordinates Forward (+)

7105098 .. 7107435

Gene Structure 2338 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0082300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGAGATTCATCATCTTCTTCTTCTTTGGGTTTTTTTTGCTTCTTCTGGTTCTGATTGCAACAGTGGAATCTACATCAACATGCAATAGTACAGACCAAGAACAAGTCTCCAAGGCCTTCAAATCAGTCCAAAGCTTCAATCTTTCTTGGTTCCAAAATCAAACTCCCAACTGCTCAAACCCACCGATCACAGAAATCAAGCTCCATTCCAGAAACCTCAGCGGCATAGTCTCATGGAAGTACCTCAGAAACATGTCACATCTTCAAAACCTCGATCTGTCAAACAATTCTCTCAAAGGCTCTGTCCCAGGTTGGTTCTGGTCTCTTCCAACCTTACTCGAAGTCAATCTCTCCAAGAACAAGTTCGGCGGCAGCTTCGGGTTCGAAAGCGGTTCAGTTTCCTCAGTCCAGAAGCTCAATCTCTCCAGCAACAGGTTCACCAACTCTGTTCTGCTCTCTGGTTTTCCACACCTCAAAATCCTCGACCTTTCTCACAACAACTTGGGTGCTCTGCCTTCTGGTCTTGCCAATCTCACTAACGTCCACCACCTCGACATTTCGTGCTGCAAAATCTCTGGCAGCTCGAAACCCATCTCTGTTCTTCGCACATTGACCTACTTAGATGTCTCAAACAACTCCATGAACGGTTCTTTCCCTTCGGATTTCCCCCCCATTAGTCCCCTCAAATTCTTGAACATTTCGTTCAATAATTTCAGAGGTATAGTCGGACCAGAAAAGTACCAAAAATTTGGCAAAGCAGCTTTCATTCATGCCGGGAAGGATTTAAATCTTACATCTTTCAATGCTTCCAATTCCAAATCCCCGACCTCTCACTCTCCACCACCACATTTTAAATCCCCAATTCAAAAACCTAAACCCCTCCCAAAACCCATAACCCAAAACTCCACCCTTCAAAAACCCAAATCTTCAAAACCCAAAACAACTCTCATTATCAGCCTATCTTGCGCCTCCACATTTGTGCTTGCTTTCATAGCCATCTGCCTGGCTTGCAGATACAGAAGAAAGCAAATTGCCAAGAAACACAAATGGGCCATCTCGAAACCGGTCCAGCTCGACCGGGTCCGGATCGAGAAGTCCGGCCCGTTCTCCTTCGAAACCGAGTCCGGGACATCCTGGGTCGCCGACATCAAGGAGCCAACTTCCGCCCAGGTTGTCATGTTCGAGAAGCCGCTCATGAACTACCTCACCTTCAAAGACCTCATCGCCGCCACGTCACACTTCGGCAAAGACTCCCAGCTGGCCGAGGGCCGCTGCGGGCCCGTCTACACCGCCGTGCTTCCCGGAGACCTCCACGTGGCGATCAAGGTCTTGGAAAACGCCAGAGACGTCGAACACGACGCGGCGGTGGACATGTTCGAAAACCTGTCGAAGTTGAAACACCCGAACTTGTTGCCTGTCTCCGGTTACTGCATTGCAGGGAAAGAGAAGCTGGTGTTGTACGAGTTCATGGCGAACGGGGATTTACACAGGTGGCTGCACGAGCTGCCAACCGGGGAGCCCAACGTGGAGGATTGGAGTGCCGACACGTGGGACCAGAGTGGAGCCTACTCGCCCGAGAAGAAGGGTTGGCTCACGCGCCACCGCATTGCGGTTGGCATAGCGCGTGGGCTGGCGTACCTCCACCATGCCGGGTCGAAGCCGGTGGTACACGGCCACCTTGTGACTTCGAACATATTGCTGGGGGCGAATTTCGAGCCGAGAATTGCCGATTTCGGGCTGCGGAATTTCGGGATGAGGGATGGAGATATCGGCGGAGGGACCGAGACGGACGTGTATTGTTTTGGGGTGGTGTTGATGGAGCTGTTGACGGGGCGGCCCGGGACGGCGGAGACGGTGGTGTGGGTGAGGAGGATGGTGAGGGAGGCGCGTGGGGTGGACGCGCTGGATGAGAGGTTGAGGGAAGGTGGGGATTTGGAGAGGGAGATGGTGGAGAGTCTCCGAGTTGGGTACTTGTGTACGGCGGAGTCACCTGGGAAAAGGCCCAGCATGCAGCAGGTGCTGGGTTTGCTCAAAGACATACATCCCAGTTCCGCTGCCACTCTGGGCTTTGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0005737 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016602 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044798 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0090575 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04612 ko05152 map04612 map05152

Pfam Domains

Protein Families

CBFD_NFYB_HMF

Protein Analysis

691

Amino Acids

76.33

Weight (kDa)

9.22

Isoelectric Point (pI)

31.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	64 - 122	2.4e-08	Leucine rich repeat
PK_Tyr_Ser-Thr	PF07714	417 - 582	7.7e-22	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	417 - 581	3.3e-13	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008093)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G56170 AT1G56170
fragaria_vesca	FvH4_3g14690 FvH4_3g14690 FvH4_3g14690
malus_domestica	MD05G1229600.v1.1 MD10G1208800.v1.1
prunus_persica	Prupe.4G132200_v2.0.a1
pyrus_communis	pycom05g21060 pycom10g17760
rosa_chinensis	RchiOBHm_Chr5g0024181
rosa_laevigata	RLG00000032777
rosa_multiflora	Rmu_co8304163.1_g000001 Rmu_sc0004033.1_g000008 Rmu_sc0039918.1_g000001
rosa_roxburghii	Rroxscaffold_1G00055060 Rroxscaffold_1G00055710
rosa_rugosa	Rorug05G0082300 Rorug05G0082400
rosa_samantha	Rh5AG172900 Rh5BG169500 Rh5CG185400 Rh5DG171900
rosa_wichuraiana	Rw5G015600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2005
AatII	GACGTC	1 cut(s)	1350
Acc36I	ACCTGC	1 cut(s)	2005
AccBSI	CCGCTC	1 cut(s)	1192
AccI	GTMKAC	1 cut(s)	1284
AccII	CGCG	5 cut(s)	1361, 1597, 1624, 1888, 1901
AccIII	TCCGGA	1 cut(s)	1083
AclWI	GGATC	1 cut(s)	1094
AcoI	YGGCCR	2 cut(s)	1260, 1672
AcsI	RAATTY	4 cut(s)	686, 746, 1708, 1744
AcvI	CACGTG	2 cut(s)	1315, 1548
AcyI	GRCGYC	1 cut(s)	1347
AdeI	CACNNNGTG	1 cut(s)	1681
AfaI	GTAC	8 cut(s)	91, 242, 740, 1460, 1637, 1668, 1970, 1978
AfiI	CCNNNNNNNGG	7 cut(s)	432, 1125, 1315, 1421, 1548, 1609, 1734
AflIII	ACRYGT	4 cut(s)	252, 1371, 1545, 1791
AgeI	ACCGGT	1 cut(s)	1063
AjiI	CACGTC	2 cut(s)	1233, 1792
AjnI	CCWGG	5 cut(s)	307, 1002, 1133, 1167, 1990
AjuI	GAANNNNNNNTTGG	2 cut(s)	347, 379
AleI	CACNNNNGTG	2 cut(s)	977, 1292
Alw21I	GWGCWC	1 cut(s)	511
AlwI	GGATC	1 cut(s)	1094
AlwNI	CAGNNNCTG	1 cut(s)	2020
Ama87I	CYCGRG	2 cut(s)	1574, 1838
Aor13HI	TCCGGA	1 cut(s)	1083
AoxI	GGCC	9 cut(s)	114, 1050, 1099, 1260, 1267, 1277, 1672, 1835, 2000
ApaI	GGGCCC	1 cut(s)	1281
ApoI	RAATTY	4 cut(s)	686, 746, 1708, 1744
ArsI	GACNNNNNNTTYG	2 cut(s)	288, 320
AsiGI	ACCGGT	1 cut(s)	1063
Asp700I	GAANNNNTTC	1 cut(s)	362
AspLEI	GCGC	5 cut(s)	968, 1599, 1624, 1888, 1903
AsuC2I	CCSGG	8 cut(s)	775, 1079, 1126, 1302, 1513, 1651, 1839, 1840
AsuHPI	GGTGA	5 cut(s)	430, 1198, 1876, 1888, 1980
AsuII	TTCGAA	4 cut(s)	384, 1113, 1377, 1688
AvaI	CYCGRG	2 cut(s)	1574, 1838
AvaII	GGWCC	5 cut(s)	728, 1066, 1081, 1552, 1779
BaeGI	GKGCMC	1 cut(s)	1281
BaeI	ACNNNNGTAYC	2 cut(s)	1960, 1993
BanII	GRGCYC	2 cut(s)	1281, 1521
BauI	CACGAG	1 cut(s)	1499
BbrPI	CACGTG	2 cut(s)	1315, 1548
Bbv12I	GWGCWC	1 cut(s)	511
BbvCI	CCTCAGC	1 cut(s)	218
BccI	CCATC	7 cut(s)	599, 1004, 1061, 1754, 1810, 1867, 1939
BceAI	ACGGC	4 cut(s)	1277, 1687, 1860, 1995
BcgI	CGANNNNNNTGC	4 cut(s)	1393, 1427, 1678, 1712
BciT130I	CCWGG	5 cut(s)	309, 1004, 1135, 1169, 1992
BcnI	CCSGG	8 cut(s)	775, 1079, 1126, 1302, 1513, 1651, 1839, 1840
BfuAI	ACCTGC	1 cut(s)	2005
Bme18I	GGWCC	5 cut(s)	728, 1066, 1081, 1552, 1779
BmeT110I	CYCGRG	2 cut(s)	1574, 1838
BmgBI	CACGTC	2 cut(s)	1233, 1792
BmiI	GGNNCC	8 cut(s)	152, 1082, 1155, 1279, 1518, 1553, 1564, 1780
BmrI	ACTGGG	1 cut(s)	2040
BmuI	ACTGGG	1 cut(s)	2040
BpmI	CTGGAG	1 cut(s)	409
Bpu10I	CCTNAGC	1 cut(s)	218
Bpu14I	TTCGAA	4 cut(s)	384, 1113, 1377, 1688
BpuMI	CCSGG	8 cut(s)	775, 1079, 1126, 1302, 1513, 1651, 1839, 1840
BsaAI	YACGTR	2 cut(s)	1315, 1548
BsaBI	GATNNNNATC	1 cut(s)	786
BsaHI	GRCGYC	1 cut(s)	1347
BsaI	GGTCTC	2 cut(s)	327, 1299
BsaJI	CCNNGG	8 cut(s)	111, 307, 1134, 1167, 1263, 1512, 1838, 1991
BsaWI	WCCGGW	3 cut(s)	1063, 1083, 1421
Bsc4I	CCNNNNNNNGG	7 cut(s)	432, 1125, 1315, 1421, 1548, 1609, 1734
Bse118I	RCCGGY	2 cut(s)	1063, 1660
Bse1I	ACTGG	1 cut(s)	2046
Bse3DI	GCAATG	2 cut(s)	1431, 1605
Bse8I	GATNNNNATC	1 cut(s)	786
BseAI	TCCGGA	1 cut(s)	1083
BseBI	CCWGG	5 cut(s)	309, 1004, 1135, 1169, 1992
BseDI	CCNNGG	8 cut(s)	111, 307, 1134, 1167, 1263, 1512, 1838, 1991
BseGI	GGATG	6 cut(s)	1130, 1758, 1765, 1878, 1912, 2041
BseJI	GATNNNNATC	1 cut(s)	786
BseLI	CCNNNNNNNGG	7 cut(s)	432, 1125, 1315, 1421, 1548, 1609, 1734
BseMI	GCAATG	2 cut(s)	1431, 1605
BseMII	CTCAG	3 cut(s)	232, 259, 417
BseNI	ACTGG	1 cut(s)	2046
BseRI	GAGGAG	1 cut(s)	1882
BseSI	GKGCMC	1 cut(s)	1281
BseYI	CCCAGC	4 cut(s)	1254, 1699, 2003, 2020
BsgI	GTGCAG	1 cut(s)	1481
Bsh1236I	CGCG	5 cut(s)	1361, 1597, 1624, 1888, 1901
Bsh1285I	CGRYCG	1 cut(s)	1078
BshFI	GGCC	9 cut(s)	116, 1052, 1101, 1262, 1269, 1279, 1674, 1837, 2002
BshTI	ACCGGT	1 cut(s)	1063
BsiEI	CGRYCG	1 cut(s)	1078
BsiHKAI	GWGCWC	1 cut(s)	511
BsiHKCI	CYCGRG	2 cut(s)	1574, 1838
BslFI	GGGAC	6 cut(s)	290, 663, 1141, 1565, 1792, 1855
BslI	CCNNNNNNNGG	7 cut(s)	432, 1125, 1315, 1421, 1548, 1609, 1734
BsmBI	CGTCTC	3 cut(s)	1338, 1778, 1844
BsmFI	GGGAC	6 cut(s)	290, 663, 1141, 1565, 1792, 1855
BsnI	GGCC	9 cut(s)	116, 1052, 1101, 1262, 1269, 1279, 1674, 1837, 2002
Bso31I	GGTCTC	2 cut(s)	327, 1299
BsoBI	CYCGRG	2 cut(s)	1574, 1838
Bsp119I	TTCGAA	4 cut(s)	384, 1113, 1377, 1688
Bsp120I	GGGCCC	1 cut(s)	1277
Bsp1286I	GDGCHC	3 cut(s)	511, 1281, 1521
Bsp13I	TCCGGA	1 cut(s)	1083
Bsp143I	GATC	4 cut(s)	186, 274, 1086, 1320
BspANI	GGCC	9 cut(s)	116, 1052, 1101, 1262, 1269, 1279, 1674, 1837, 2002
BspCNI	CTCAG	3 cut(s)	231, 258, 416
BspEI	TCCGGA	1 cut(s)	1083
BspFNI	CGCG	5 cut(s)	1361, 1597, 1624, 1888, 1901
BspHI	TCATGA	1 cut(s)	1194
BspLI	GGNNCC	8 cut(s)	152, 1082, 1155, 1279, 1518, 1553, 1564, 1780
BspMI	ACCTGC	1 cut(s)	2005
BspPI	GGATC	1 cut(s)	1094
BspT104I	TTCGAA	4 cut(s)	384, 1113, 1377, 1688
BspTNI	GGTCTC	2 cut(s)	327, 1299
BsrBI	CCGCTC	1 cut(s)	1192
BsrDI	GCAATG	2 cut(s)	1431, 1605
BsrFI	RCCGGY	2 cut(s)	1063, 1660
BsrI	ACTGG	1 cut(s)	2046
BssAI	RCCGGY	2 cut(s)	1063, 1660
BssECI	CCNNGG	8 cut(s)	111, 307, 1134, 1167, 1263, 1512, 1838, 1991
BssMI	GATC	4 cut(s)	186, 274, 1086, 1320
BssNI	GRCGYC	1 cut(s)	1347
BssSI	CACGAG	1 cut(s)	1499
BssT1I	CCWWGG	1 cut(s)	111
Bst2BI	CACGAG	1 cut(s)	1499
Bst2UI	CCWGG	5 cut(s)	309, 1004, 1135, 1169, 1992
Bst4CI	ACNGT	3 cut(s)	64, 647, 1855
Bst6I	CTCTTC	1 cut(s)	330
BstACI	GRCGYC	1 cut(s)	1347
BstAPI	GCANNNNNTGC	2 cut(s)	1504, 2017
BstBAI	YACGTR	2 cut(s)	1315, 1548
BstBI	TTCGAA	4 cut(s)	384, 1113, 1377, 1688
BstC8I	GCNNGC	6 cut(s)	984, 1009, 1260, 1277, 1632, 2009
BstDEI	CTNAG	4 cut(s)	218, 245, 403, 619
BstF5I	GGATG	6 cut(s)	1130, 1758, 1765, 1878, 1912, 2041
BstFNI	CGCG	5 cut(s)	1361, 1597, 1624, 1888, 1901
BstHHI	GCGC	5 cut(s)	968, 1599, 1624, 1888, 1903
BstKTI	GATC	4 cut(s)	189, 277, 1089, 1323
BstMBI	GATC	4 cut(s)	186, 274, 1086, 1320
BstMCI	CGRYCG	1 cut(s)	1078
BstMWI	GCNNNNNNNGC	8 cut(s)	963, 992, 1008, 1501, 1504, 2008, 2017, 2026
BstNI	CCWGG	5 cut(s)	309, 1004, 1135, 1169, 1992
BstNSI	RCATGY	4 cut(s)	84, 256, 1375, 2011
BstSLI	GKGCMC	1 cut(s)	1281
BstUI	CGCG	5 cut(s)	1361, 1597, 1624, 1888, 1901
BstXI	CCANNNNNNTGG	2 cut(s)	749, 1003
BsuRI	GGCC	9 cut(s)	116, 1052, 1101, 1262, 1269, 1279, 1674, 1837, 2002
BtgZI	GCGATG	1 cut(s)	1207
BtrI	CACGTC	2 cut(s)	1233, 1792
BtsCI	GGATG	6 cut(s)	1130, 1758, 1765, 1878, 1912, 2041
BtsIMutI	CAGTG	1 cut(s)	69
BveI	ACCTGC	1 cut(s)	2005
Cac8I	GCNNGC	6 cut(s)	984, 1009, 1260, 1277, 1632, 2009
CaiI	CAGNNNCTG	1 cut(s)	2020
CciI	TCATGA	1 cut(s)	1194
CfoI	GCGC	5 cut(s)	968, 1599, 1624, 1888, 1903
Cfr10I	RCCGGY	2 cut(s)	1063, 1660
Cfr9I	CCCGGG	1 cut(s)	1838
CseI	GACGC	2 cut(s)	1367, 1907
Csp6I	GTAC	8 cut(s)	90, 241, 739, 1459, 1636, 1667, 1969, 1977
CspAI	ACCGGT	1 cut(s)	1063
CviQI	GTAC	8 cut(s)	90, 241, 739, 1459, 1636, 1667, 1969, 1977
DdeI	CTNAG	4 cut(s)	218, 245, 403, 619
DpnI	GATC	4 cut(s)	188, 276, 1088, 1322
DpnII	GATC	4 cut(s)	186, 274, 1086, 1320
DraI	TTTAAA	2 cut(s)	786, 853
DraIII	CACNNNGTG	1 cut(s)	1681
EaeI	YGGCCR	2 cut(s)	1260, 1672
Eam1104I	CTCTTC	1 cut(s)	330
EarI	CTCTTC	1 cut(s)	330
EciI	GGCGGA	4 cut(s)	1153, 1788, 1862, 1997
Eco130I	CCWWGG	1 cut(s)	111
Eco147I	AGGCCT	1 cut(s)	116
Eco24I	GRGCYC	2 cut(s)	1281, 1521
Eco31I	GGTCTC	2 cut(s)	327, 1299
Eco32I	GATATC	1 cut(s)	1768
Eco47I	GGWCC	5 cut(s)	728, 1066, 1081, 1552, 1779
Eco72I	CACGTG	2 cut(s)	1315, 1548
Eco88I	CYCGRG	2 cut(s)	1574, 1838
EcoRII	CCWGG	5 cut(s)	307, 1002, 1133, 1167, 1990
EcoRV	GATATC	1 cut(s)	1768
EcoT14I	CCWWGG	1 cut(s)	111
EcoT38I	GRGCYC	2 cut(s)	1281, 1521
ErhI	CCWWGG	1 cut(s)	111
Esp3I	CGTCTC	3 cut(s)	1338, 1778, 1844
FaqI	GGGAC	6 cut(s)	290, 663, 1141, 1565, 1792, 1855
FauI	CCCGC	1 cut(s)	1268
FblI	GTMKAC	1 cut(s)	1284
FokI	GGATG	6 cut(s)	1117, 1765, 1772, 1885, 1919, 2028
FriOI	GRGCYC	2 cut(s)	1281, 1521
GlaI	GCGC	5 cut(s)	967, 1598, 1623, 1887, 1902
GsaI	CCCAGC	4 cut(s)	1258, 1703, 2007, 2024
GsuI	CTGGAG	1 cut(s)	409
HaeIII	GGCC	9 cut(s)	116, 1052, 1101, 1262, 1269, 1279, 1674, 1837, 2002
HgaI	GACGC	2 cut(s)	1367, 1907
HhaI	GCGC	5 cut(s)	968, 1599, 1624, 1888, 1903
Hin1I	GRCGYC	1 cut(s)	1347
Hin6I	GCGC	5 cut(s)	966, 1597, 1622, 1886, 1901
HinP1I	GCGC	5 cut(s)	966, 1597, 1622, 1886, 1901
HincII	GTYRAC	1 cut(s)	1827
HindII	GTYRAC	1 cut(s)	1827
HindIII	AAGCTT	1 cut(s)	133
HinfI	GANTC	6 cut(s)	6, 68, 1121, 1250, 1954, 1985
HphI	GGTGA	5 cut(s)	430, 1198, 1876, 1888, 1980
Hpy166II	GTNNAC	8 cut(s)	438, 544, 1285, 1369, 1669, 1827, 1897, 1977
Hpy188I	TCNGA	7 cut(s)	54, 248, 661, 716, 728, 1961, 2075
Hpy188III	TCNNGA	9 cut(s)	210, 409, 691, 1057, 1084, 1090, 1183, 1195, 1750
Hpy8I	GTNNAC	8 cut(s)	438, 544, 1285, 1369, 1669, 1827, 1897, 1977
Hpy99I	CGWCG	2 cut(s)	1352, 1361
HpyAV	CCTTC	9 cut(s)	127, 525, 666, 772, 920, 1120, 1219, 1576, 1916
HpyCH4III	ACNGT	3 cut(s)	64, 647, 1855
HpyCH4IV	ACGT	7 cut(s)	540, 1232, 1314, 1347, 1524, 1547, 1791
HpyCH4V	TGCA	8 cut(s)	59, 84, 567, 1011, 1431, 1436, 1498, 2011
HpyF10VI	GCNNNNNNNGC	8 cut(s)	963, 992, 1008, 1501, 1504, 2008, 2017, 2026
HpyF3I	CTNAG	4 cut(s)	218, 245, 403, 619
HpySE526I	ACGT	7 cut(s)	540, 1232, 1314, 1347, 1524, 1547, 1791
Hsp92I	GRCGYC	1 cut(s)	1347
HspAI	GCGC	5 cut(s)	966, 1597, 1622, 1886, 1901
Kpn2I	TCCGGA	1 cut(s)	1083
Kzo9I	GATC	4 cut(s)	186, 274, 1086, 1320
LmnI	GCTCC	5 cut(s)	207, 1153, 1516, 1562, 1819
MaeII	ACGT	7 cut(s)	540, 1232, 1314, 1347, 1524, 1547, 1791
MaeIII	GTNAC	5 cut(s)	255, 1233, 1424, 1681, 1986
MalI	GATC	4 cut(s)	188, 276, 1088, 1322
MbiI	CCGCTC	1 cut(s)	1192
MboI	GATC	4 cut(s)	186, 274, 1086, 1320
MhlI	GDGCHC	3 cut(s)	511, 1281, 1521
MlyI	GAGTC	4 cut(s)	1130, 1244, 1963, 1994
MmeI	TCCRAC	2 cut(s)	353, 706
MroI	TCCGGA	1 cut(s)	1083
MroXI	GAANNNNTTC	1 cut(s)	362
MseI	TTAA	2 cut(s)	785, 852
MslI	CAYNNNNRTG	3 cut(s)	79, 977, 1292
MspA1I	CMGCKG	4 cut(s)	222, 1258, 1272, 2054
MvaI	CCWGG	5 cut(s)	309, 1004, 1135, 1169, 1992
MvnI	CGCG	5 cut(s)	1361, 1597, 1624, 1888, 1901
MwoI	GCNNNNNNNGC	8 cut(s)	963, 992, 1008, 1501, 1504, 2008, 2017, 2026
NciI	CCSGG	8 cut(s)	775, 1079, 1126, 1302, 1513, 1651, 1839, 1840
NdeII	GATC	4 cut(s)	186, 274, 1086, 1320
NlaIV	GGNNCC	8 cut(s)	152, 1082, 1155, 1279, 1518, 1553, 1564, 1780
NmeAIII	GCCGAG	2 cut(s)	1288, 1743
NmuCI	GTSAC	4 cut(s)	255, 1233, 1681, 1986
NspI	RCATGY	4 cut(s)	84, 256, 1375, 2011
NspV	TTCGAA	4 cut(s)	384, 1113, 1377, 1688
OliI	CACNNNNGTG	2 cut(s)	977, 1292
PaeI	GCATGC	1 cut(s)	2011
PagI	TCATGA	1 cut(s)	1194
PaqCI	CACCTGC	1 cut(s)	2005
PceI	AGGCCT	1 cut(s)	116
PciI	ACATGT	2 cut(s)	252, 1371
PcsI	WCGNNNNNNNCGW	2 cut(s)	1344, 1353
PdmI	GAANNNNTTC	1 cut(s)	362
PfeI	GAWTC	2 cut(s)	6, 68
PflFI	GACNNNGTC	1 cut(s)	1079
PfoI	TCCNGGA	2 cut(s)	1124, 1300
PinAI	ACCGGT	1 cut(s)	1063
PleI	GAGTC	4 cut(s)	1129, 1244, 1962, 1993
PmaCI	CACGTG	2 cut(s)	1315, 1548
PmlI	CACGTG	2 cut(s)	1315, 1548
PpsI	GAGTC	4 cut(s)	1129, 1244, 1962, 1993
Ppu21I	YACGTR	2 cut(s)	1315, 1548
PscI	ACATGT	2 cut(s)	252, 1371
Psp6I	CCWGG	5 cut(s)	307, 1002, 1133, 1167, 1990
PspCI	CACGTG	2 cut(s)	1315, 1548
PspFI	CCCAGC	4 cut(s)	1254, 1699, 2003, 2020
PspGI	CCWGG	5 cut(s)	307, 1002, 1133, 1167, 1990
PspN4I	GGNNCC	8 cut(s)	152, 1082, 1155, 1279, 1518, 1553, 1564, 1780
PspOMI	GGGCCC	1 cut(s)	1277
PstNI	CAGNNNCTG	1 cut(s)	2020
PsyI	GACNNNGTC	1 cut(s)	1079
PvuII	CAGCTG	1 cut(s)	1258
RsaI	GTAC	8 cut(s)	91, 242, 740, 1460, 1637, 1668, 1970, 1978
RsaNI	GTAC	8 cut(s)	90, 241, 739, 1459, 1636, 1667, 1969, 1977
RseI	CAYNNNNRTG	3 cut(s)	79, 977, 1292
SaqAI	TTAA	2 cut(s)	785, 852
Sau3AI	GATC	4 cut(s)	186, 274, 1086, 1320
SchI	GAGTC	4 cut(s)	1130, 1244, 1963, 1994
SduI	GDGCHC	3 cut(s)	511, 1281, 1521
SfuI	TTCGAA	4 cut(s)	384, 1113, 1377, 1688
SinI	GGWCC	5 cut(s)	728, 1066, 1081, 1552, 1779
SmaI	CCCGGG	1 cut(s)	1840
SmiI	ATTTAAAT	1 cut(s)	786
SmiMI	CAYNNNNRTG	3 cut(s)	79, 977, 1292
SphI	GCATGC	1 cut(s)	2011
SseBI	AGGCCT	1 cut(s)	116
StuI	AGGCCT	1 cut(s)	116
StyI	CCWWGG	1 cut(s)	111
SwaI	ATTTAAAT	1 cut(s)	786
TaaI	ACNGT	3 cut(s)	64, 647, 1855
TaiI	ACGT	7 cut(s)	543, 1235, 1317, 1350, 1527, 1550, 1794
TaqII	GACCGA	1 cut(s)	1796
TatI	WGTACW	1 cut(s)	89
TauI	GCSGC	7 cut(s)	225, 372, 1192, 1229, 1272, 1364, 1837
TfiI	GAWTC	2 cut(s)	6, 68
Tru1I	TTAA	2 cut(s)	785, 852
Tru9I	TTAA	2 cut(s)	785, 852
TscAI	CASTG	1 cut(s)	69
TseFI	GTSAC	4 cut(s)	255, 1233, 1681, 1986
Tsp45I	GTSAC	4 cut(s)	255, 1233, 1681, 1986
TspDTI	ATGAA	6 cut(s)	656, 754, 758, 979, 1211, 1456
TspGWI	ACGGA	1 cut(s)	1802
TspMI	CCCGGG	1 cut(s)	1838
TspRI	CASTG	1 cut(s)	69
Tth111I	GACNNNGTC	1 cut(s)	1079
VpaK11BI	GGWCC	5 cut(s)	728, 1066, 1081, 1552, 1779
XapI	RAATTY	4 cut(s)	686, 746, 1708, 1744
XceI	RCATGY	4 cut(s)	84, 256, 1375, 2011
XcmI	CCANNNNNNNNNTGG	1 cut(s)	315
XmaI	CCCGGG	1 cut(s)	1838
XmiI	GTMKAC	1 cut(s)	1284
XmnI	GAANNNNTTC	1 cut(s)	362
ZraI	GACGTC	1 cut(s)	1348

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.