Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0014562

Physical Location & Seq

Genomic Coordinates Forward (+)

15030253 .. 15033935

Gene Structure 3683 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0161500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1566 bp

ATGGCCAAAGAGAAGCAGAAAGAAGAGAAGAAGCTCTACGTCGGCATAGCATGGAACTACACAGCCGAGCTGAAGCTGCTGCTAACAGCTCTCCTCATCCTCTGCACTCTCGCCACCCTCCTCCAGTTCATCCCTTCCCGCTTCACCATCTCCACCTCCGACCTAAGGGTCTGCATCTCCCGGGTCCTCACTCCGGCCCAGCCCCAGCAGGCCCAATCCCCGGCCCAGCAACAAGAAGATAGTATTGTAACTAATGTTGATATTTCAGCTGCTGCTGCTTCACCGCCGCCGCTTCCGTCTCCTCCGCCTCCTCCTCCACCGTCGCCGCCGACGGAGGAGGTTCTGAGCAACGGAATAATAAAACGCGTGTTTAACCCGCACGGCTCGGCGGCGTATAGCTATATCAACATGGGAGCTTACAGAGGAGGAATGAACACTTTTGCTATAATGGGTTTAGCGTCGAAGCCTCTCCACGTGTACTCAAATCCGACGTACGAATGCCAGTGGATCCCCACCGTCAACTCCTCCGCCACCGTCTCCGCCGTCGGATACAAGATCCTACCGGACTGGGGCTACGGCCGAGTTTACACCGTTGTGGTGGTTAACTGCACATTTTCTCAGCCCGTTAATTCCGATAACTCCGGCGGCAAGTTGGTCCTTCTCGCCTCCACCGGCGGCGGCGGTGACCGGAACTTGAACGTCACCGACGAGATTGAGGCCTTGACAGAAAACCCAGGAAGCTTAGACCCTTCAATCTTCACTTCCAAGCCTAAATATGATTATTTTTATTGTGGGTCATCTTTATATGGGAATTTGAGTCCTCAGAGAGTGAGGGAGTGGATTGCTTACCATGTGAGGCTGTTTGGACCCAGATCTCATTTTGTGATTCATGATGCTGGTGGGATTCATGAGGAGGTTTTGGAGGTTTTGAAGCCATGGATGGAGTTGGGGTACGTGACCTTGCACGATATAAGAGACCAGGAGAGGTTTGATGGGTACTATCACAACCAGTTCATGGTGGTGAATGATTGTTTGCATAGGTATAAGTTCATGGCAAAGTGGATGTTCTTTTTTGATGTGGATGAGTATATCTATATGCCTCCCAAGAGCACCCTCAAAACTGTTCTGGATTCTCTGGCTGAGTATTCACAGTTCACCATTGAACAGATGCCAATGAGCAACAAGCTCTGCCGCATTGAAGATTATCACAAAACTCACAGAAAATGGGGGTTTGAGAAACTTGTGTTCAAGGATGTGAAGAAAGGCATAAGAAGAGACCGAAAATACGCGGTGCGACCGCGCAATGTGTATGGCACCGGGGTGCACATGTCGCAGAACCTAGCTGGGAAGACGACGCACAAAACCGAGAACAGGATCAAATATTTCCATTACCACGGTACCATTGCAGACAGGCGTGAGCCTTGTAAGAAGCTGATCAATGACACACAGATCTACCTTGACAAAGTCCCTTATGTTATGGACACAACCATGAGAGATGTTGCTGGGGCTGTGAAGAGATTTGAGCAAAGAATGATTGGATCCAGGTTACAACAGACTAGGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0008150 GO:0008152 GO:0009055 GO:0009344 GO:0009507 GO:0009521 GO:0009523 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009654 GO:0009767 GO:0009987 GO:0015979 GO:0016020 GO:0016491 GO:0019684 GO:0022900 GO:0031976 GO:0031977 GO:0031984 GO:0032991 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045156 GO:0055035 GO:0055114 GO:0098796 GO:1902494 GO:1990204

KEGG Pathways

Metabolic & Signaling

ko00195 ko01100 map00195 map01100

Pfam Domains

Protein Families

PsbQ

Protein Analysis

521

Amino Acids

59.23

Weight (kDa)

9.03

Isoelectric Point (pI)

47.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_92	PF01697	260 - 477	1.6e-32	Glycosyltransferase family 92
Glyco_tranf_2_4	PF13704	276 - 375	6.5e-08	Glycosyl transferase family 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0014562)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01440
fragaria_vesca	FvH4_3g21690
malus_domestica	MD03G1212800.v1.1 MD11G1227900.v1.1
prunus_persica	Prupe.4G201300_v2.0.a1
pyrus_communis	pycom03g16160 pycom11g20060
rosa_chinensis	RchiOBHm_Chr5g0037191
rosa_laevigata	RLG00000033755
rosa_multiflora	Rmu_co8022472.1_g000001
rosa_roxburghii	Rroxscaffold_1G00043790
rosa_rugosa	Rorug05G0161500
rosa_samantha	Rh5AG253100 Rh5BG255000 Rh5CG287700 Rh5DG263500
rosa_wichuraiana	Rw5G023380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	167
Acc65I	GGTACC	1 cut(s)	1397
AccB1I	GGYRCC	2 cut(s)	1313, 1397
AccB7I	CCANNNNNTGG	1 cut(s)	1015
AccII	CGCG	3 cut(s)	366, 1289, 1300
AclWI	GGATC	6 cut(s)	502, 515, 550, 1382, 1533, 1546
AcoI	YGGCCR	2 cut(s)	3, 577
AcsI	RAATTY	1 cut(s)	811
AcuI	CTGAAG	1 cut(s)	92
AcvI	CACGTG	1 cut(s)	475
AfaI	GTAC	5 cut(s)	479, 494, 953, 998, 1399
AfiI	CCNNNNNNNGG	6 cut(s)	165, 193, 220, 569, 1015, 1371
AflIII	ACRYGT	3 cut(s)	364, 474, 1326
AgsI	TTSAA	6 cut(s)	697, 753, 931, 1163, 1199, 1249
AjnI	CCWGG	3 cut(s)	733, 978, 1541
AleI	CACNNNNGTG	2 cut(s)	593, 1319
Alw21I	GWGCWC	2 cut(s)	1112, 1326
Alw26I	GTCTC	4 cut(s)	303, 541, 969, 1269
Alw44I	GTGCAC	1 cut(s)	1322
AlwI	GGATC	6 cut(s)	502, 515, 550, 1382, 1533, 1546
AlwNI	CAGNNNCTG	1 cut(s)	272
Ama87I	CYCGRG	1 cut(s)	180
AoxI	GGCC	6 cut(s)	3, 195, 210, 222, 577, 717
ApaLI	GTGCAC	1 cut(s)	1322
ApeKI	GCWGC	5 cut(s)	76, 79, 269, 272, 275
ApoI	RAATTY	1 cut(s)	811
Asp718I	GGTACC	1 cut(s)	1397
AspLEI	GCGC	1 cut(s)	1302
AspS9I	GGNCC	6 cut(s)	184, 196, 211, 223, 655, 866
AsuC2I	CCSGG	4 cut(s)	181, 182, 221, 1318
AsuHPI	GGTGA	6 cut(s)	136, 273, 694, 695, 1033, 1147
AvaI	CYCGRG	1 cut(s)	180
AvaII	GGWCC	3 cut(s)	184, 655, 866
AxyI	CCTNAGG	1 cut(s)	164
BaeGI	GKGCMC	1 cut(s)	1326
BaeI	ACNNNNGTAYC	2 cut(s)	1381, 1414
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	2 cut(s)	507, 1538
BanI	GGYRCC	2 cut(s)	1313, 1397
BarI	GAAGNNNNNNTAC	2 cut(s)	20, 52
BbrPI	CACGTG	1 cut(s)	475
BbsI	GAAGAC	1 cut(s)	1355
Bbv12I	GWGCWC	2 cut(s)	1112, 1326
BbvI	GCAGC	5 cut(s)	63, 66, 256, 259, 262
BccI	CCATC	3 cut(s)	155, 934, 986
BceAI	ACGGC	3 cut(s)	397, 527, 592
BciT130I	CCWGG	3 cut(s)	735, 980, 1543
BciVI	GTATCC	1 cut(s)	542
BclI	TGATCA	1 cut(s)	1434
BcnI	CCSGG	4 cut(s)	181, 182, 221, 1318
BcoDI	GTCTC	4 cut(s)	303, 541, 969, 1269
BfaI	CTAG	2 cut(s)	1340, 1557
BfuI	GTATCC	1 cut(s)	542
BglII	AGATCT	2 cut(s)	872, 1449
Bme1390I	CCNGG	7 cut(s)	181, 182, 221, 735, 980, 1318, 1543
Bme18I	GGWCC	3 cut(s)	184, 655, 866
BmeT110I	CYCGRG	1 cut(s)	180
BmgT120I	GGNCC	6 cut(s)	184, 196, 211, 223, 655, 866
BmiI	GGNNCC	6 cut(s)	185, 509, 868, 1315, 1399, 1540
BmrFI	CCNGG	7 cut(s)	181, 182, 221, 735, 980, 1318, 1543
BmrI	ACTGGG	1 cut(s)	577
BmsI	GCATC	3 cut(s)	183, 883, 1158
BmuI	ACTGGG	1 cut(s)	577
BpiI	GAAGAC	1 cut(s)	1355
BpmI	CTGGAG	1 cut(s)	107
BpuMI	CCSGG	4 cut(s)	181, 182, 221, 1318
BsaAI	YACGTR	2 cut(s)	475, 955
BsaI	GGTCTC	2 cut(s)	969, 1269
BsaJI	CCNNGG	6 cut(s)	180, 219, 733, 935, 1317, 1393
BsaWI	WCCGGW	2 cut(s)	562, 687
BsaXI	ACNNNNNCTCC	2 cut(s)	935, 965
Bsc4I	CCNNNNNNNGG	6 cut(s)	165, 193, 220, 569, 1015, 1371
Bse118I	RCCGGY	1 cut(s)	671
Bse1I	ACTGG	4 cut(s)	124, 502, 572, 1009
Bse21I	CCTNAGG	1 cut(s)	164
Bse3DI	GCAATG	2 cut(s)	1309, 1401
BseBI	CCWGG	3 cut(s)	735, 980, 1543
BseDI	CCNNGG	6 cut(s)	180, 219, 733, 935, 1317, 1393
BseGI	GGATG	6 cut(s)	96, 129, 945, 1068, 1087, 1258
BseLI	CCNNNNNNNGG	6 cut(s)	165, 193, 220, 569, 1015, 1371
BseMI	GCAATG	2 cut(s)	1309, 1401
BseMII	CTCAG	4 cut(s)	335, 632, 836, 1131
BseNI	ACTGG	4 cut(s)	124, 502, 572, 1009
BseRI	GAGGAG	9 cut(s)	83, 110, 291, 300, 303, 350, 438, 514, 926
BseSI	GKGCMC	1 cut(s)	1326
BseX3I	CGGCCG	1 cut(s)	577
BseXI	GCAGC	5 cut(s)	63, 66, 256, 259, 262
BseYI	CCCAGC	5 cut(s)	198, 204, 225, 1343, 1502
BsgI	GTGCAG	2 cut(s)	88, 592
Bsh1236I	CGCG	3 cut(s)	366, 1289, 1300
Bsh1285I	CGRYCG	2 cut(s)	580, 1298
BshFI	GGCC	6 cut(s)	5, 197, 212, 224, 579, 719
BshNI	GGYRCC	2 cut(s)	1313, 1397
BsiEI	CGRYCG	2 cut(s)	580, 1298
BsiHKAI	GWGCWC	2 cut(s)	1112, 1326
BsiHKCI	CYCGRG	1 cut(s)	180
BsiSI	CCGG	8 cut(s)	181, 194, 221, 563, 642, 672, 688, 1317
BsiWI	CGTACG	1 cut(s)	492
BslFI	GGGAC	1 cut(s)	1451
BslI	CCNNNNNNNGG	6 cut(s)	165, 193, 220, 569, 1015, 1371
BsmAI	GTCTC	4 cut(s)	303, 541, 969, 1269
BsmBI	CGTCTC	2 cut(s)	303, 541
BsmFI	GGGAC	1 cut(s)	1451
BsmI	GAATGC	1 cut(s)	503
BsnI	GGCC	6 cut(s)	5, 197, 212, 224, 579, 719
Bso31I	GGTCTC	2 cut(s)	969, 1269
BsoBI	CYCGRG	1 cut(s)	180
Bsp1286I	GDGCHC	2 cut(s)	1112, 1326
Bsp143I	GATC	7 cut(s)	507, 555, 872, 1374, 1434, 1449, 1538
Bsp19I	CCATGG	1 cut(s)	935
BspANI	GGCC	6 cut(s)	5, 197, 212, 224, 579, 719
BspCNI	CTCAG	4 cut(s)	336, 631, 835, 1132
BspFNI	CGCG	3 cut(s)	366, 1289, 1300
BspHI	TCATGA	2 cut(s)	889, 907
BspLI	GGNNCC	6 cut(s)	185, 509, 868, 1315, 1399, 1540
BspPI	GGATC	6 cut(s)	502, 515, 550, 1382, 1533, 1546
BspT107I	GGYRCC	2 cut(s)	1313, 1397
BspTNI	GGTCTC	2 cut(s)	969, 1269
BsrDI	GCAATG	2 cut(s)	1309, 1401
BsrFI	RCCGGY	1 cut(s)	671
BsrI	ACTGG	4 cut(s)	124, 502, 572, 1009
BssAI	RCCGGY	1 cut(s)	671
BssECI	CCNNGG	6 cut(s)	180, 219, 733, 935, 1317, 1393
BssMI	GATC	7 cut(s)	507, 555, 872, 1374, 1434, 1449, 1538
BssT1I	CCWWGG	1 cut(s)	935
Bst2UI	CCWGG	3 cut(s)	735, 980, 1543
Bst4CI	ACNGT	7 cut(s)	321, 517, 535, 592, 1123, 1152, 1397
Bst6I	CTCTTC	3 cut(s)	18, 1267, 1508
BstBAI	YACGTR	2 cut(s)	475, 955
BstC8I	GCNNGC	1 cut(s)	210
BstDEI	CTNAG	6 cut(s)	164, 344, 618, 742, 822, 1140
BstDSI	CCRYGG	2 cut(s)	935, 1393
BstEII	GGTNACC	1 cut(s)	683
BstF5I	GGATG	6 cut(s)	96, 129, 945, 1068, 1087, 1258
BstFNI	CGCG	3 cut(s)	366, 1289, 1300
BstHHI	GCGC	1 cut(s)	1302
BstKTI	GATC	7 cut(s)	510, 558, 875, 1377, 1437, 1452, 1541
BstMAI	GTCTC	4 cut(s)	303, 541, 969, 1269
BstMBI	GATC	7 cut(s)	507, 555, 872, 1374, 1434, 1449, 1538
BstMCI	CGRYCG	2 cut(s)	580, 1298
BstMWI	GCNNNNNNNGC	3 cut(s)	76, 275, 1330
BstNI	CCWGG	3 cut(s)	735, 980, 1543
BstNSI	RCATGY	1 cut(s)	1330
BstPI	GGTNACC	1 cut(s)	683
BstSCI	CCNGG	7 cut(s)	179, 180, 219, 733, 978, 1316, 1541
BstSLI	GKGCMC	1 cut(s)	1326
BstUI	CGCG	3 cut(s)	366, 1289, 1300
BstV1I	GCAGC	5 cut(s)	63, 66, 256, 259, 262
BstV2I	GAAGAC	1 cut(s)	1355
BstX2I	RGATCY	5 cut(s)	507, 555, 872, 1449, 1538
BstYI	RGATCY	5 cut(s)	507, 555, 872, 1449, 1538
BstZI	CGGCCG	1 cut(s)	577
Bsu36I	CCTNAGG	1 cut(s)	164
BsuI	GTATCC	1 cut(s)	542
BsuRI	GGCC	6 cut(s)	5, 197, 212, 224, 579, 719
BtgI	CCRYGG	2 cut(s)	935, 1393
BtsCI	GGATG	6 cut(s)	96, 129, 945, 1068, 1087, 1258
BtsIMutI	CAGTG	1 cut(s)	509
Cac8I	GCNNGC	1 cut(s)	210
CaiI	CAGNNNCTG	1 cut(s)	272
CciI	TCATGA	2 cut(s)	889, 907
CfoI	GCGC	1 cut(s)	1302
Cfr10I	RCCGGY	1 cut(s)	671
Cfr13I	GGNCC	6 cut(s)	184, 196, 211, 223, 655, 866
Cfr9I	CCCGGG	1 cut(s)	180
CseI	GACGC	2 cut(s)	447, 1363
Csp6I	GTAC	5 cut(s)	478, 493, 952, 997, 1398
CviQI	GTAC	5 cut(s)	478, 493, 952, 997, 1398
DdeI	CTNAG	6 cut(s)	164, 344, 618, 742, 822, 1140
DpnI	GATC	7 cut(s)	509, 557, 874, 1376, 1436, 1451, 1540
DpnII	GATC	7 cut(s)	507, 555, 872, 1374, 1434, 1449, 1538
DrdI	GACNNNNNNGTC	1 cut(s)	167
DseDI	GACNNNNNNGTC	1 cut(s)	167
EaeI	YGGCCR	2 cut(s)	3, 577
EagI	CGGCCG	1 cut(s)	577
Eam1104I	CTCTTC	3 cut(s)	18, 1267, 1508
EarI	CTCTTC	3 cut(s)	18, 1267, 1508
EciI	GGCGGA	3 cut(s)	294, 517, 529
EclXI	CGGCCG	1 cut(s)	577
Eco130I	CCWWGG	1 cut(s)	935
Eco147I	AGGCCT	1 cut(s)	719
Eco31I	GGTCTC	2 cut(s)	969, 1269
Eco47I	GGWCC	3 cut(s)	184, 655, 866
Eco52I	CGGCCG	1 cut(s)	577
Eco57I	CTGAAG	1 cut(s)	92
Eco72I	CACGTG	1 cut(s)	475
Eco81I	CCTNAGG	1 cut(s)	164
Eco88I	CYCGRG	1 cut(s)	180
Eco91I	GGTNACC	1 cut(s)	683
EcoO109I	RGGNCCY	1 cut(s)	184
EcoO65I	GGTNACC	1 cut(s)	683
EcoRII	CCWGG	3 cut(s)	733, 978, 1541
EcoT14I	CCWWGG	1 cut(s)	935
ErhI	CCWWGG	1 cut(s)	935
Esp3I	CGTCTC	2 cut(s)	303, 541
FaqI	GGGAC	1 cut(s)	1451
FauI	CCCGC	2 cut(s)	146, 384
FbaI	TGATCA	1 cut(s)	1434
FokI	GGATG	6 cut(s)	83, 116, 952, 1075, 1094, 1265
FspBI	CTAG	2 cut(s)	1340, 1557
GlaI	GCGC	1 cut(s)	1301
GsaI	CCCAGC	5 cut(s)	202, 208, 229, 1347, 1506
GsuI	CTGGAG	1 cut(s)	107
HaeIII	GGCC	6 cut(s)	5, 197, 212, 224, 579, 719
HapII	CCGG	8 cut(s)	181, 194, 221, 563, 642, 672, 688, 1317
HgaI	GACGC	2 cut(s)	447, 1363
HhaI	GCGC	1 cut(s)	1302
Hin6I	GCGC	1 cut(s)	1300
HinP1I	GCGC	1 cut(s)	1300
HincII	GTYRAC	2 cut(s)	520, 604
HindII	GTYRAC	2 cut(s)	520, 604
HindIII	AAGCTT	1 cut(s)	739
HinfI	GANTC	4 cut(s)	817, 886, 904, 1130
HpaI	GTTAAC	1 cut(s)	604
HpaII	CCGG	8 cut(s)	181, 194, 221, 563, 642, 672, 688, 1317
HphI	GGTGA	6 cut(s)	136, 273, 694, 695, 1033, 1147
Hpy166II	GTNNAC	6 cut(s)	478, 520, 586, 604, 1155, 1324
Hpy188I	TCNGA	6 cut(s)	160, 345, 489, 548, 634, 825
Hpy188III	TCNNGA	3 cut(s)	890, 908, 1127
Hpy8I	GTNNAC	6 cut(s)	478, 520, 586, 604, 1155, 1324
Hpy99I	CGWCG	8 cut(s)	44, 325, 334, 463, 493, 548, 710, 1357
HpyAV	CCTTC	3 cut(s)	144, 668, 759
HpyCH4III	ACNGT	7 cut(s)	321, 517, 535, 592, 1123, 1152, 1397
HpyCH4IV	ACGT	5 cut(s)	39, 474, 491, 699, 954
HpyCH4V	TGCA	7 cut(s)	105, 174, 609, 964, 1036, 1324, 1406
HpyF10VI	GCNNNNNNNGC	3 cut(s)	76, 275, 1330
HpyF3I	CTNAG	6 cut(s)	164, 344, 618, 742, 822, 1140
HpySE526I	ACGT	5 cut(s)	39, 474, 491, 699, 954
HspAI	GCGC	1 cut(s)	1300
KpnI	GGTACC	1 cut(s)	1401
Ksp22I	TGATCA	1 cut(s)	1434
KspAI	GTTAAC	1 cut(s)	604
Kzo9I	GATC	7 cut(s)	507, 555, 872, 1374, 1434, 1449, 1538
LmnI	GCTCC	1 cut(s)	413
Lsp1109I	GCAGC	5 cut(s)	63, 66, 256, 259, 262
LweI	GCATC	3 cut(s)	183, 883, 1158
MaeI	CTAG	2 cut(s)	1340, 1557
MaeII	ACGT	5 cut(s)	39, 474, 491, 699, 954
MaeIII	GTNAC	5 cut(s)	247, 683, 700, 955, 1545
MalI	GATC	7 cut(s)	509, 557, 874, 1376, 1436, 1451, 1540
MboI	GATC	7 cut(s)	507, 555, 872, 1374, 1434, 1449, 1538
MboII	GAAGA	9 cut(s)	35, 40, 248, 748, 1211, 1270, 1284, 1360, 1525
MflI	RGATCY	5 cut(s)	507, 555, 872, 1449, 1538
MhlI	GDGCHC	2 cut(s)	1112, 1326
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	2 cut(s)	628, 811
MluI	ACGCGT	1 cut(s)	364
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	826
MmeI	TCCRAC	3 cut(s)	183, 512, 526
Mox20I	TGGCCA	1 cut(s)	5
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	3 cut(s)	372, 603, 627
MslI	CAYNNNNRTG	4 cut(s)	593, 1019, 1319, 1487
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	269
MspI	CCGG	8 cut(s)	181, 194, 221, 563, 642, 672, 688, 1317
MspR9I	CCNGG	7 cut(s)	181, 182, 221, 735, 980, 1318, 1543
Mva1269I	GAATGC	1 cut(s)	503
MvaI	CCWGG	3 cut(s)	735, 980, 1543
MvnI	CGCG	3 cut(s)	366, 1289, 1300
MwoI	GCNNNNNNNGC	3 cut(s)	76, 275, 1330
NciI	CCSGG	4 cut(s)	181, 182, 221, 1318
NcoI	CCATGG	1 cut(s)	935
NdeII	GATC	7 cut(s)	507, 555, 872, 1374, 1434, 1449, 1538
NlaIV	GGNNCC	6 cut(s)	185, 509, 868, 1315, 1399, 1540
NmeAIII	GCCGAG	3 cut(s)	91, 365, 605
NmuCI	GTSAC	3 cut(s)	683, 700, 955
NspI	RCATGY	1 cut(s)	1330
OliI	CACNNNNGTG	2 cut(s)	593, 1319
PagI	TCATGA	2 cut(s)	889, 907
PceI	AGGCCT	1 cut(s)	719
PciI	ACATGT	1 cut(s)	1326
PcsI	WCGNNNNNNNCGW	1 cut(s)	705
PctI	GAATGC	1 cut(s)	503
PfeI	GAWTC	3 cut(s)	886, 904, 1130
Pfl23II	CGTACG	1 cut(s)	492
PflFI	GACNNNGTC	1 cut(s)	1463
PflMI	CCANNNNNTGG	1 cut(s)	1015
PleI	GAGTC	1 cut(s)	825
PmaCI	CACGTG	1 cut(s)	475
PmlI	CACGTG	1 cut(s)	475
PpsI	GAGTC	1 cut(s)	825
Ppu21I	YACGTR	2 cut(s)	475, 955
PpuMI	RGGWCCY	1 cut(s)	184
PscI	ACATGT	1 cut(s)	1326
Psp5II	RGGWCCY	1 cut(s)	184
Psp6I	CCWGG	3 cut(s)	733, 978, 1541
PspCI	CACGTG	1 cut(s)	475
PspEI	GGTNACC	1 cut(s)	683
PspFI	CCCAGC	5 cut(s)	198, 204, 225, 1343, 1502
PspGI	CCWGG	3 cut(s)	733, 978, 1541
PspLI	CGTACG	1 cut(s)	492
PspN4I	GGNNCC	6 cut(s)	185, 509, 868, 1315, 1399, 1540
PspPI	GGNCC	6 cut(s)	184, 196, 211, 223, 655, 866
PspPPI	RGGWCCY	1 cut(s)	184
PsrI	GAACNNNNNNTAC	2 cut(s)	1136, 1168
PstNI	CAGNNNCTG	1 cut(s)	272
PsuI	RGATCY	5 cut(s)	507, 555, 872, 1449, 1538
PsyI	GACNNNGTC	1 cut(s)	1463
PvuII	CAGCTG	1 cut(s)	269
RsaI	GTAC	5 cut(s)	479, 494, 953, 998, 1399
RsaNI	GTAC	5 cut(s)	478, 493, 952, 997, 1398
RseI	CAYNNNNRTG	4 cut(s)	593, 1019, 1319, 1487
SaqAI	TTAA	3 cut(s)	372, 603, 627
Sau3AI	GATC	7 cut(s)	507, 555, 872, 1374, 1434, 1449, 1538
Sau96I	GGNCC	6 cut(s)	184, 196, 211, 223, 655, 866
SchI	GAGTC	1 cut(s)	826
ScrFI	CCNGG	7 cut(s)	181, 182, 221, 735, 980, 1318, 1543
SduI	GDGCHC	2 cut(s)	1112, 1326
SfaNI	GCATC	3 cut(s)	183, 883, 1158
SgrAI	CRCCGGYG	1 cut(s)	671
SinI	GGWCC	3 cut(s)	184, 655, 866
SmaI	CCCGGG	1 cut(s)	182
SmiMI	CAYNNNNRTG	4 cut(s)	593, 1019, 1319, 1487
Sse9I	AATT	2 cut(s)	628, 811
SseBI	AGGCCT	1 cut(s)	719
SspI	AATATT	1 cut(s)	1382
SspMI	CTAG	2 cut(s)	1340, 1557
StuI	AGGCCT	1 cut(s)	719
StyD4I	CCNGG	7 cut(s)	179, 180, 219, 733, 978, 1316, 1541
StyI	CCWWGG	1 cut(s)	935
TaaI	ACNGT	7 cut(s)	321, 517, 535, 592, 1123, 1152, 1397
TaiI	ACGT	5 cut(s)	42, 477, 494, 702, 957
TaqI	TCGA	1 cut(s)	461
TaqII	GACCGA	1 cut(s)	1293
TasI	AATT	2 cut(s)	628, 811
TatI	WGTACW	1 cut(s)	477
TauI	GCSGC	8 cut(s)	289, 292, 328, 392, 648, 678, 681, 1194
TfiI	GAWTC	3 cut(s)	886, 904, 1130
Tru1I	TTAA	3 cut(s)	372, 603, 627
Tru9I	TTAA	3 cut(s)	372, 603, 627
TscAI	CASTG	1 cut(s)	509
TseFI	GTSAC	3 cut(s)	683, 700, 955
TseI	GCWGC	5 cut(s)	76, 79, 269, 272, 275
Tsp45I	GTSAC	3 cut(s)	683, 700, 955
TspDTI	ATGAA	6 cut(s)	118, 446, 878, 896, 1003, 1039
TspGWI	ACGGA	3 cut(s)	285, 347, 366
TspMI	CCCGGG	1 cut(s)	180
TspRI	CASTG	1 cut(s)	509
Tth111I	GACNNNGTC	1 cut(s)	1463
Van91I	CCANNNNNTGG	1 cut(s)	1015
VneI	GTGCAC	1 cut(s)	1322
VpaK11BI	GGWCC	3 cut(s)	184, 655, 866
XapI	RAATTY	1 cut(s)	811
XceI	RCATGY	1 cut(s)	1330
XmaI	CCCGGG	1 cut(s)	180
XspI	CTAG	2 cut(s)	1340, 1557

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.