Rorug05G0273000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0011266
Physical Location & Seq
Reverse (-)
30802428 .. 30804823
2396 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0273000.1

Sequence Viewer

Length: 2046 bp
ATGGACAGAACTTATGCAATAGTCGTGGTAGTAATCAGGGACCAATTCATCTTCTTGTTAGTTCGATACTTCACGGGGAATACCAAGGATGAGAATGGAAACAAGGAGTTCAATGGCAGCAACACAGAAGTAGATCACATAATAAGCGCTGTCATTGGGATTGTAGCGGCTGCGGTTTCCATTGTTGTGGTAGCAATTCCAGAAGGTCTCTCATTAGCACTAATTCTTGGTGCCTATTCCAAGAAGATAATGATGGCTGACAAAGCAATGGATCTGAAGCTCTCTGCTTGTGAGACCATGGGATCGGTTACTACAATTTGCACTGACAAAACAGGTACTCTTACTACGAATCAGATGGAGGTGACCCAGTTTTGGTTAGGTAAATATTCTTTGGAAGAAGAAGCTTATTCGTCAAAGATTTCTCCTTCTGTTCTTCATTTGATCCAAGAAGGAGTTGCTCTGAATACAACTGGTAGTGTGCACAAGCAAAGTTTGGATTCAAAAGTAGAAATCTCAGGCAGTCCAACTGAAAAGGCTATTATTTCATGGGGGGTATATAAGTTGCAGATGGATATGGAGGAAGTAATGAAGAGTTGTAGCATTCTCCATGTTGAGGCCTTTGATTCGCAGAATATGCGAAGTGGGGTTTCAATGAAGAGGAACGCAGACAGCACAGTTCATTTACATTGGAAAGGAGCTCCAGAGATGATACTGGAAATGTGTTCAAGTTACTACACTCCCTCTGGACTCGTTAAAGGTATGGATGACAGTGAAAAAATGAATTTTGAGGAGATTATTCAAGGTATGGCAGCTAGCAGACTCCGGTGTATTGCGTTTGCACATAAAGAAGTTCCAGCAGATCAAGACCACACAACTAAGCTAAAAGAAGATGGATTGACCTTGCTGGGACTCGTAGGTCTTAAAGATCCATGCCGTCCAGAAGCGAAGAAAGCAGTTGAAGATTGTCAATATGCAGGGGTGAACGTCAAAATGATTACAGGCGACAATATTTTCACTGCTAAAGCCATAGCCACAGAATGTGGGATACTCAAGCCCGGTCATGACATCTTCAGTGGAGCAGTGATAAATGGTGTGGAATTTCGAAGCTACACCCACAAGGAGAGAATGTTGAAGCTAGACAATATCTGTGTAATGGCACGGTCTTCTGCTGCTGATAAGCTTCTAATGGTGCGATGCTTGAAGCAGAAAGGTCATGTAGTTGCAGTGACTGGTCATGGCGCTACTGATGCACCAGCACTGGAAGAAGCTGATATAGGACTATCTATGGGAATTCAAGGAACAGAAGTTGCCAAAGAAAGCTCAGATATTATAATCACAGATGATAACTTTGCATCAGTGGTCAGTGTTTTGGCGTGTGGAAGATGTGTTTATCACAATACGCAGAAGCTCATCCAGTTCCAGCTCACAGCAAATGTTGCTGGTCTTTTGATCAACTCTGCAGCAGCAGCTTCATCAAGGCAAGTCCCATTTTCGATAGTTCGTTCAATTTGGTTGAACGTGATTATGGACACACTACTAGCTCTGGCTCTTACCAAGGAGAAACCCACAAAAGAACTTATGGAAAAGCAACCGGTGGGCAGAACTGAGCCCTTCATCACCAATGTCATGTGCAGGAACCTCACGGCTCAAGCTCTGTACCAGACAACTGTCCTCTTGATATTACAGTTCAGGGGAAAAGCAATGTTTGGTGTTAATGATAAGGTAAATGGCACCTTGATCTTTAATACTTATGTGTTTTGCCAGATGTTCAATGAGTTCAATGCAAGGAAGCTTGAGAAGAAGGATATATTTAGGAATATCCACACCGACAAATTGTTCATGGGGATAATTGCAGTGGCAGTTATTCTACAGATTGCGACAGTGGAATTTCTAAGCAAATTTGAAGATATAGAGAGGTTGAACTACAGACTATGGGGAGTAAGTCTTGGAACTGCAGCCATTTCTTGGCCCATCGGTTGGGTTGTTAAGTGTATACCTGTGCCACAGAAACCCATTTTCCACTACCTGAAGATGAAGATGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

681

Amino Acids

75.07

Weight (kDa)

6.94

Isoelectric Point (pI)

34.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase PF00702 104 - 424 8.2e-12 haloacid dehalogenase-like hydrolase
Cation_ATPase PF13246 146 - 314 8.1e-28 P-type ATPase, cytoplasmic domain N
Cation_ATPase_C PF00689 495 - 664 6e-35 Cation transporting ATPase, C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011266)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01870
fragaria_vesca FvH4_3g28750
malus_domestica MD03G1174000.v1.1 MD11G1192200.v1.1
prunus_persica Prupe.4G250100_v2.0.a1
pyrus_communis pycom03g13160 pycom11g16800
rosa_chinensis RchiOBHm_Chr5g0052301
rosa_laevigata RLG00000034827
rosa_multiflora Rmu_sc0021240.1_g000003 Rmu_sc0028377.1_g000002
rosa_roxburghii Rroxscaffold_1G00028130 Rroxscaffold_1G00028140
rosa_rugosa Rorug05G0273000
rosa_samantha Rh5AG345900 Rh5BG356600 Rh5CG381900 Rh5DG371800
rosa_wichuraiana Rw5G032620 Rw5G032660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1331
AasI GACNNNNNNGTC 1 cut(s) 915
AccB1I GGYRCC 2 cut(s) 230, 1730
AccB7I CCANNNNNTGG 2 cut(s) 1965, 1977
AccI GTMKAC 1 cut(s) 1993
AciI CCGC 2 cut(s) 167, 173
AclWI GGATC 4 cut(s) 279, 310, 436, 920
AcsI RAATTY 5 cut(s) 781, 1097, 1290, 1886, 1898
AcuI CTGAAG 2 cut(s) 296, 1054
AfaI GTAC 2 cut(s) 337, 1658
AfeI AGCGCT 1 cut(s) 148
AfiI CCNNNNNNNGG 4 cut(s) 372, 613, 1965, 1977
AgeI ACCGGT 1 cut(s) 1591
Alw21I GWGCWC 2 cut(s) 483, 700
Alw26I GTCTC 2 cut(s) 212, 287
Alw44I GTGCAC 1 cut(s) 479
AlwI GGATC 4 cut(s) 279, 310, 436, 920
AlwNI CAGNNNCTG 1 cut(s) 1229
Aor51HI AGCGCT 1 cut(s) 148
AoxI GGCC 2 cut(s) 615, 1967
ApaLI GTGCAC 1 cut(s) 479
ApeKI GCWGC 8 cut(s) 117, 170, 809, 1169, 1460, 1463, 1466, 1955
ApoI RAATTY 5 cut(s) 781, 1097, 1290, 1886, 1898
AsiGI ACCGGT 1 cut(s) 1591
AspLEI GCGC 2 cut(s) 149, 1241
AspS9I GGNCC 2 cut(s) 40, 1968
AsuC2I CCSGG 1 cut(s) 1056
AsuHPI GGTGA 3 cut(s) 373, 991, 1609
AsuII TTCGAA 1 cut(s) 1102
AsuNHI GCTAGC 1 cut(s) 812
AvaII GGWCC 1 cut(s) 40
BaeGI GKGCMC 1 cut(s) 483
BanI GGYRCC 2 cut(s) 230, 1730
BanII GRGCYC 2 cut(s) 700, 1611
BbsI GAAGAC 1 cut(s) 1155
Bbv12I GWGCWC 2 cut(s) 483, 700
BbvI GCAGC 8 cut(s) 129, 157, 821, 1156, 1472, 1475, 1478, 1967
BccI CCATC 5 cut(s) 247, 349, 562, 884, 1979
BceAI ACGGC 2 cut(s) 918, 1659
BciVI GTATCC 1 cut(s) 1038
BclI TGATCA 1 cut(s) 1449
BcnI CCSGG 1 cut(s) 1056
BcoDI GTCTC 2 cut(s) 212, 287
BfaI CTAG 3 cut(s) 813, 1136, 1538
BfmI CTRYAG 4 cut(s) 1458, 1868, 1924, 1953
BfoI RGCGCY 2 cut(s) 150, 1242
BfuI GTATCC 1 cut(s) 1038
BisI GCNGC 9 cut(s) 118, 168, 171, 810, 1170, 1461, 1464, 1467, 1956
BlsI GCNGC 9 cut(s) 119, 169, 172, 811, 1171, 1462, 1465, 1468, 1957
Bme1390I CCNGG 1 cut(s) 1056
Bme18I GGWCC 1 cut(s) 40
BmgT120I GGNCC 2 cut(s) 40, 1968
BmiI GGNNCC 4 cut(s) 41, 232, 1637, 1732
BmrFI CCNGG 1 cut(s) 1056
BmrI ACTGGG 1 cut(s) 361
BmsI GCATC 3 cut(s) 1184, 1237, 1361
BmtI GCTAGC 1 cut(s) 816
BmuI ACTGGG 1 cut(s) 361
BoxI GACNNNNGTC 1 cut(s) 1667
BpiI GAAGAC 1 cut(s) 1155
BpmI CTGGAG 1 cut(s) 684
Bpu14I TTCGAA 1 cut(s) 1102
BpuEI CTTGAG 3 cut(s) 1034, 1632, 1814
BpuMI CCSGG 1 cut(s) 1056
BsaI GGTCTC 2 cut(s) 212, 287
BsaJI CCNNGG 3 cut(s) 84, 297, 1554
BsaWI WCCGGW 2 cut(s) 822, 1591
BsaXI ACNNNNNCTCC 2 cut(s) 1112, 1142
Bsc4I CCNNNNNNNGG 4 cut(s) 372, 613, 1965, 1977
Bse118I RCCGGY 1 cut(s) 1591
Bse1I ACTGG 6 cut(s) 367, 475, 717, 1234, 1263, 1414
Bse3DI GCAATG 2 cut(s) 273, 1707
BseDI CCNNGG 3 cut(s) 84, 297, 1554
BseGI GGATG 3 cut(s) 94, 769, 1410
BseLI CCNNNNNNNGG 4 cut(s) 372, 613, 1965, 1977
BseMI GCAATG 2 cut(s) 273, 1707
BseMII CTCAG 3 cut(s) 528, 1335, 1596
BseNI ACTGG 6 cut(s) 367, 475, 717, 1234, 1263, 1414
BseRI GAGGAG 1 cut(s) 803
BseSI GKGCMC 1 cut(s) 483
BseXI GCAGC 8 cut(s) 129, 157, 821, 1156, 1472, 1475, 1478, 1967
BseYI CCCAGC 1 cut(s) 904
BsgI GTGCAG 1 cut(s) 1651
BshFI GGCC 2 cut(s) 617, 1969
BshNI GGYRCC 2 cut(s) 230, 1730
BshTI ACCGGT 1 cut(s) 1591
BsiHKAI GWGCWC 2 cut(s) 483, 700
BsiSI CCGG 3 cut(s) 823, 1056, 1592
BslFI GGGAC 3 cut(s) 53, 921, 1469
BslI CCNNNNNNNGG 4 cut(s) 372, 613, 1965, 1977
BsmAI GTCTC 2 cut(s) 212, 287
BsmFI GGGAC 3 cut(s) 53, 921, 1469
BsmI GAATGC 1 cut(s) 600
BsnI GGCC 2 cut(s) 617, 1969
Bso31I GGTCTC 2 cut(s) 212, 287
Bsp119I TTCGAA 1 cut(s) 1102
Bsp1286I GDGCHC 3 cut(s) 483, 700, 1611
Bsp143I GATC 8 cut(s) 133, 271, 302, 441, 859, 925, 1449, 1737
Bsp19I CCATGG 1 cut(s) 297
BspACI CCGC 2 cut(s) 167, 173
BspANI GGCC 2 cut(s) 617, 1969
BspCNI CTCAG 3 cut(s) 527, 1334, 1597
BspHI TCATGA 1 cut(s) 1060
BspLI GGNNCC 4 cut(s) 41, 232, 1637, 1732
BspMAI CTGCAG 2 cut(s) 1462, 1957
BspOI GCTAGC 1 cut(s) 816
BspPI GGATC 4 cut(s) 279, 310, 436, 920
BspT104I TTCGAA 1 cut(s) 1102
BspT107I GGYRCC 2 cut(s) 230, 1730
BspTNI GGTCTC 2 cut(s) 212, 287
BsrDI GCAATG 2 cut(s) 273, 1707
BsrFI RCCGGY 1 cut(s) 1591
BsrI ACTGG 6 cut(s) 367, 475, 717, 1234, 1263, 1414
BssAI RCCGGY 1 cut(s) 1591
BssECI CCNNGG 3 cut(s) 84, 297, 1554
BssMI GATC 8 cut(s) 133, 271, 302, 441, 859, 925, 1449, 1737
BssNAI GTATAC 1 cut(s) 1994
BssT1I CCWWGG 3 cut(s) 84, 297, 1554
Bst1107I GTATAC 1 cut(s) 1994
Bst4CI ACNGT 6 cut(s) 676, 770, 1161, 1669, 1686, 1882
Bst6I CTCTTC 2 cut(s) 584, 650
BstAPI GCANNNNNTGC 2 cut(s) 634, 1436
BstBI TTCGAA 1 cut(s) 1102
BstC8I GCNNGC 1 cut(s) 814
BstDEI CTNAG 5 cut(s) 514, 876, 1321, 1605, 1892
BstDSI CCRYGG 1 cut(s) 297
BstEII GGTNACC 1 cut(s) 361
BstF5I GGATG 3 cut(s) 94, 769, 1410
BstH2I RGCGCY 2 cut(s) 150, 1242
BstHHI GCGC 2 cut(s) 149, 1241
BstKTI GATC 8 cut(s) 136, 274, 305, 444, 862, 928, 1452, 1740
BstMAI GTCTC 2 cut(s) 212, 287
BstMBI GATC 8 cut(s) 133, 271, 302, 441, 859, 925, 1449, 1737
BstMWI GCNNNNNNNGC 6 cut(s) 263, 634, 950, 1247, 1436, 1466
BstPAI GACNNNNGTC 1 cut(s) 1667
BstPI GGTNACC 1 cut(s) 361
BstSCI CCNGG 1 cut(s) 1054
BstSFI CTRYAG 4 cut(s) 1458, 1868, 1924, 1953
BstSLI GKGCMC 1 cut(s) 483
BstV1I GCAGC 8 cut(s) 129, 157, 821, 1156, 1472, 1475, 1478, 1967
BstV2I GAAGAC 1 cut(s) 1155
BstX2I RGATCY 2 cut(s) 271, 925
BstXI CCANNNNNNTGG 1 cut(s) 187
BstYI RGATCY 2 cut(s) 271, 925
BstZ17I GTATAC 1 cut(s) 1994
BsuI GTATCC 1 cut(s) 1038
BsuRI GGCC 2 cut(s) 617, 1969
BtgI CCRYGG 1 cut(s) 297
BtgZI GCGATG 1 cut(s) 1207
BtsCI GGATG 3 cut(s) 94, 769, 1410
BtsI GCAGTG 4 cut(s) 1014, 1086, 1230, 1860
Cac8I GCNNGC 1 cut(s) 814
CaiI CAGNNNCTG 1 cut(s) 1229
CciI TCATGA 1 cut(s) 1060
CfoI GCGC 2 cut(s) 149, 1241
Cfr10I RCCGGY 1 cut(s) 1591
Cfr13I GGNCC 2 cut(s) 40, 1968
Csp6I GTAC 2 cut(s) 336, 1657
CspAI ACCGGT 1 cut(s) 1591
CspCI CAANNNNNGTGG 2 cut(s) 6, 41
CviAII CATG 9 cut(s) 298, 546, 608, 930, 1061, 1214, 1235, 1627, 1840
CviQI GTAC 2 cut(s) 336, 1657
DdeI CTNAG 5 cut(s) 514, 876, 1321, 1605, 1892
DpnI GATC 8 cut(s) 135, 273, 304, 443, 861, 927, 1451, 1739
DpnII GATC 8 cut(s) 133, 271, 302, 441, 859, 925, 1449, 1737
DrdI GACNNNNNNGTC 1 cut(s) 915
DseDI GACNNNNNNGTC 1 cut(s) 915
Eam1104I CTCTTC 2 cut(s) 584, 650
EarI CTCTTC 2 cut(s) 584, 650
Ecl136II GAGCTC 1 cut(s) 698
Eco130I CCWWGG 3 cut(s) 84, 297, 1554
Eco147I AGGCCT 1 cut(s) 617
Eco24I GRGCYC 2 cut(s) 700, 1611
Eco31I GGTCTC 2 cut(s) 212, 287
Eco47I GGWCC 1 cut(s) 40
Eco47III AGCGCT 1 cut(s) 148
Eco53kI GAGCTC 1 cut(s) 698
Eco57I CTGAAG 2 cut(s) 296, 1054
Eco91I GGTNACC 1 cut(s) 361
EcoICRI GAGCTC 1 cut(s) 698
EcoO65I GGTNACC 1 cut(s) 361
EcoRI GAATTC 1 cut(s) 1290
EcoT14I CCWWGG 3 cut(s) 84, 297, 1554
EcoT38I GRGCYC 2 cut(s) 700, 1611
ErhI CCWWGG 3 cut(s) 84, 297, 1554
FaeI CATG 9 cut(s) 301, 549, 611, 933, 1064, 1217, 1238, 1630, 1843
FaqI GGGAC 3 cut(s) 53, 921, 1469
FatI CATG 9 cut(s) 297, 545, 607, 929, 1060, 1213, 1234, 1626, 1839
FbaI TGATCA 1 cut(s) 1449
FblI GTMKAC 1 cut(s) 1993
Fnu4HI GCNGC 9 cut(s) 118, 168, 171, 810, 1170, 1461, 1464, 1467, 1956
FokI GGATG 3 cut(s) 101, 776, 1397
FriOI GRGCYC 2 cut(s) 700, 1611
Fsp4HI GCNGC 9 cut(s) 118, 168, 171, 810, 1170, 1461, 1464, 1467, 1956
FspBI CTAG 3 cut(s) 813, 1136, 1538
GlaI GCGC 2 cut(s) 148, 1240
GluI GCNGC 9 cut(s) 118, 168, 171, 810, 1170, 1461, 1464, 1467, 1956
GsaI CCCAGC 1 cut(s) 908
GsuI CTGGAG 1 cut(s) 684
HaeII RGCGCY 2 cut(s) 150, 1242
HaeIII GGCC 2 cut(s) 617, 1969
HapII CCGG 3 cut(s) 823, 1056, 1592
HhaI GCGC 2 cut(s) 149, 1241
Hin1II CATG 9 cut(s) 301, 549, 611, 933, 1064, 1217, 1238, 1630, 1843
Hin6I GCGC 2 cut(s) 147, 1239
HinP1I GCGC 2 cut(s) 147, 1239
HindIII AAGCTT 3 cut(s) 402, 1178, 1790
HinfI GANTC 6 cut(s) 349, 497, 623, 747, 819, 909
HpaII CCGG 3 cut(s) 823, 1056, 1592
HphI GGTGA 3 cut(s) 373, 991, 1609
Hpy166II GTNNAC 3 cut(s) 481, 982, 1994
Hpy188I TCNGA 4 cut(s) 276, 354, 462, 1324
Hpy188III TCNNGA 7 cut(s) 200, 701, 744, 863, 938, 1061, 1675
Hpy8I GTNNAC 3 cut(s) 481, 982, 1994
HpyAV CCTTC 5 cut(s) 197, 435, 443, 1621, 1795
HpyCH4III ACNGT 6 cut(s) 676, 770, 1161, 1669, 1686, 1882
HpyCH4IV ACGT 2 cut(s) 984, 1518
HpyF10VI GCNNNNNNNGC 6 cut(s) 263, 634, 950, 1247, 1436, 1466
HpyF3I CTNAG 5 cut(s) 514, 876, 1321, 1605, 1892
HpySE526I ACGT 2 cut(s) 984, 1518
Hsp92II CATG 9 cut(s) 301, 549, 611, 933, 1064, 1217, 1238, 1630, 1843
HspAI GCGC 2 cut(s) 147, 1239
Ksp22I TGATCA 1 cut(s) 1449
Kzo9I GATC 8 cut(s) 133, 271, 302, 441, 859, 925, 1449, 1737
LmnI GCTCC 3 cut(s) 695, 703, 1076
Lsp1109I GCAGC 8 cut(s) 129, 157, 821, 1156, 1472, 1475, 1478, 1967
LweI GCATC 3 cut(s) 1184, 1237, 1361
MaeI CTAG 3 cut(s) 813, 1136, 1538
MaeII ACGT 2 cut(s) 984, 1518
MaeIII GTNAC 4 cut(s) 307, 361, 728, 1225
MalI GATC 8 cut(s) 135, 273, 304, 443, 861, 927, 1451, 1739
MboI GATC 8 cut(s) 133, 271, 302, 441, 859, 925, 1449, 1737
MflI RGATCY 2 cut(s) 271, 925
MhlI GDGCHC 3 cut(s) 483, 700, 1611
MlyI GAGTC 3 cut(s) 741, 813, 903
MmeI TCCRAC 1 cut(s) 548
MnlI CCTC 9 cut(s) 352, 571, 607, 651, 751, 781, 1649, 1682, 1908
MseI TTAA 5 cut(s) 753, 921, 1713, 1743, 1986
MslI CAYNNNNRTG 1 cut(s) 185
MspI CCGG 3 cut(s) 823, 1056, 1592
MspR9I CCNGG 1 cut(s) 1056
Mva1269I GAATGC 1 cut(s) 600
MwoI GCNNNNNNNGC 6 cut(s) 263, 634, 950, 1247, 1436, 1466
NciI CCSGG 1 cut(s) 1056
NcoI CCATGG 1 cut(s) 297
NdeII GATC 8 cut(s) 133, 271, 302, 441, 859, 925, 1449, 1737
NheI GCTAGC 1 cut(s) 812
NlaIII CATG 9 cut(s) 301, 549, 611, 933, 1064, 1217, 1238, 1630, 1843
NlaIV GGNNCC 4 cut(s) 41, 232, 1637, 1732
NmuCI GTSAC 2 cut(s) 361, 1225
NspV TTCGAA 1 cut(s) 1102
PagI TCATGA 1 cut(s) 1060
PceI AGGCCT 1 cut(s) 617
PctI GAATGC 1 cut(s) 600
PfeI GAWTC 3 cut(s) 349, 497, 623
PflMI CCANNNNNTGG 2 cut(s) 1965, 1977
PinAI ACCGGT 1 cut(s) 1591
PkrI GCNGC 9 cut(s) 119, 169, 172, 811, 1171, 1462, 1465, 1468, 1957
PleI GAGTC 3 cut(s) 741, 813, 903
PpsI GAGTC 3 cut(s) 741, 813, 903
PshAI GACNNNNGTC 1 cut(s) 1667
PsiI TTATAA 1 cut(s) 1331
Psp124BI GAGCTC 1 cut(s) 700
PspEI GGTNACC 1 cut(s) 361
PspFI CCCAGC 1 cut(s) 904
PspN4I GGNNCC 4 cut(s) 41, 232, 1637, 1732
PspPI GGNCC 2 cut(s) 40, 1968
PstI CTGCAG 2 cut(s) 1462, 1957
PstNI CAGNNNCTG 1 cut(s) 1229
PsuI RGATCY 2 cut(s) 271, 925
RsaI GTAC 2 cut(s) 337, 1658
RsaNI GTAC 2 cut(s) 336, 1657
RseI CAYNNNNRTG 1 cut(s) 185
SacI GAGCTC 1 cut(s) 700
SaqAI TTAA 5 cut(s) 753, 921, 1713, 1743, 1986
SatI GCNGC 9 cut(s) 118, 168, 171, 810, 1170, 1461, 1464, 1467, 1956
Sau3AI GATC 8 cut(s) 133, 271, 302, 441, 859, 925, 1449, 1737
Sau96I GGNCC 2 cut(s) 40, 1968
SchI GAGTC 3 cut(s) 741, 813, 903
ScrFI CCNGG 1 cut(s) 1056
SduI GDGCHC 3 cut(s) 483, 700, 1611
SfaNI GCATC 3 cut(s) 1184, 1237, 1361
SfcI CTRYAG 4 cut(s) 1458, 1868, 1924, 1953
SfuI TTCGAA 1 cut(s) 1102
SinI GGWCC 1 cut(s) 40
SmiMI CAYNNNNRTG 1 cut(s) 185
SmlI CTYRAG 3 cut(s) 1049, 1647, 1793
SmoI CTYRAG 3 cut(s) 1049, 1647, 1793
SseBI AGGCCT 1 cut(s) 617
SsiI CCGC 2 cut(s) 167, 173
SspI AATATT 2 cut(s) 386, 1009
SspMI CTAG 3 cut(s) 813, 1136, 1538
SstI GAGCTC 1 cut(s) 700
StuI AGGCCT 1 cut(s) 617
StyD4I CCNGG 1 cut(s) 1054
StyI CCWWGG 3 cut(s) 84, 297, 1554
TaaI ACNGT 6 cut(s) 676, 770, 1161, 1669, 1686, 1882
TaiI ACGT 2 cut(s) 987, 1521
TaqI TCGA 3 cut(s) 64, 1102, 1493
TauI GCSGC 1 cut(s) 170
TfiI GAWTC 3 cut(s) 349, 497, 623
Tru1I TTAA 5 cut(s) 753, 921, 1713, 1743, 1986
Tru9I TTAA 5 cut(s) 753, 921, 1713, 1743, 1986
TseFI GTSAC 2 cut(s) 361, 1225
TseI GCWGC 8 cut(s) 117, 170, 809, 1169, 1460, 1463, 1466, 1955
Tsp45I GTSAC 2 cut(s) 361, 1225
Van91I CCANNNNNTGG 2 cut(s) 1965, 1977
VneI GTGCAC 1 cut(s) 479
VpaK11BI GGWCC 1 cut(s) 40
XapI RAATTY 5 cut(s) 781, 1097, 1290, 1886, 1898
XmiI GTMKAC 1 cut(s) 1993
XspI CTAG 3 cut(s) 813, 1136, 1538
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.