Rorug05G0528000

Belongs to the CRISP family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0015529
Physical Location & Seq
Reverse (-)
71650825 .. 71729437
78613 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0528000.1

Sequence Viewer

Length: 2811 bp
ATGGAAGAAGAAGAAGAAGGAATGGAGGAGGAGGAGGATGAGGAAGACGACGATGAAGAAGACGAAGATAGTGAAGGAGAGGATGAAGATGAAGATGGACTGAAGAAGAAAAAGGGAGGGGATTCTCAGACTAAGAAGAACACATGCTCTTTATGGGGAGTACAGAATTTCCAGATGAAAATGAGTATGACAGTTACTTGTCCAAGCATGGAGGATGCATACACGGAAGTAGAGCATACTTGCTACCATTTTGAAGTGAAACGAGAGTTTCTCAAGGGTGCCTTGACAAGATTTTCTCAGTTCTTTGTTTCACCCCTTGTAAAAATTGAAGCCATGGAGCGGGAGGTACAGGCTGTAGATTCAGAGTTTAACCAGGTTCTGCAGAACGATGCTTGCCGCCTTGAACAACTTCAATGCCATACAGCCTCACCTGGTCACCCATTTAATAGATTTGCATGGGGGAATAAAAAAAGCTTGAGCAATGCCATGGAAAAAGGGATCAACTTGCGGGAACAAATATTGAAATTGTACAGAGATTATTACCATGGTGGATTGATGAAGCTAGTTGTCATAGGAGGAGAATCTCTTGATGTACTTGAGAATTGGGTTTTGGAATTGTTTGGTAACGTCAAAAAAGGTCCCCAAGTAGATCTGGAATTCAAGGCGGAAGGTCCGATTTGGAAAGCTGGAAAAGTTTACAGGCTAGAGGCTGTTAAAGATGTTCATATACTCCACTTAACATGGACATTGCCATGCCTTCGTCAAGACTATTTGAAGAAATCAGAAGATTATTTATCTCATCTCCTTGGGCATGAGGGCAGGGGAAGTTTGCATTCCTATTTCAAAGTTAAGGGGTGGGCAACATCTCTGGCTGCTGGTGTTGGGGATGACGGGATGCATCGTTCTTCTGTGTCTTATGTCTTTCGCATGGACATTCATCTCACTGACTCTGGATTGGATAAGATTTTTGATATAATTGGCTTGGTCTACCAATACATAAAGTTATTGCATCAAGTGTCCCCACAAGAATGGATATTTAAGGAACTGCAGGATACTGGGAACATGGAATTTAGATTTGCAGAGGAGCAGCCTCAGGATGATTATGCCTCAGAACTTGCAGGAAATTTACTAATTTATGCAGCAGAACATGTTATTTATGGGTCCTACGCATACAAGATTTGGGATGAGGAATCGATCAAATATGTTCTTGATTTCCTTAGACCAGAAAACATGAGGATTGATGTTGTATCAAAGCCCTCATTTAAGTCAGAAGATTTCCAGTGCGAACCTTGGTTTGGGTCACATTATACTGAGGAAGATATATCTCCATCTTTGATAGATTTGTGGAAGGACCCTCCAGAAATTGATGTTTCATTGCATCTCCCAGAAAAGAATGAGTTCATTCCTACTGATTTTTCCATTCGTTCTGATGGTCTTGATACTACAGATACAGCTTCTCCGAGATGTATACTGGATGAGCCATTGGTGAAGTTCTGGTACAAACTTGATAATACTTTTAAACTTCCGCGGGCAAATACTTATTTCCGTATCAATCCCAATGGTGGATATGATAATGTGAAGAGTTGTGTCTTGACTGAACTATATGTATCCCTCCTCAAAGATGAGCTGAATGAGATTGTTTATCAGGCTAGTGTTGCCAAGCTGGAAACTTCGGTATCTGTATCGACTGACAAGCTGGAGCTAAAGGTCTACGGTTTCAATGACAAGCTTCCAGCTCTGTTGTCACAGATTCTGAAAACAACCAAAAGTTTCATGCCAACTTCTGATCGTTTTATGGTTATCAAAGAAGATATGGAGCGAAAGTTAAAGAACACCAATATGAAGCCTCTGAGTCACTCTACATACTTGAGAGTGCAAGTTTTGTTCCAGAGATTCTATGATGTTGATGAGAAGTTGCATGTTTTAAGTGGACTGTCTATTTCTGATATGAAGTCATTTATTCCCCAACTTTGGTCCCAGGTATACATTGAAGGCCTCTGTCATGGAAATTTGTCAGAAAAAGAAGCAATCAGCCTTTCAGATATATTTAAAACAATTTTTTGTGTACAACCACTTCCAATTGAACTGAGGCGCAGTGAACAGTGTATTTGTCTTCCTCCTTCTGCTAACCTCATTAGAGATGTCAGTGTGAAGAATAAGTCTGAAAAAAATTCGGTGATTGAGCTGTATTTTCAAATTGAGCGGGAATTGAGGATCGAGTCCCCCAGATTGAGAGCCTTGATAGATCTTTTCAATGAAATTGTGGAGGAACCACTTTTCAATCAGCTAAGGACGAAGGAGCAGCTTGGTTATACTGTTCATTGTGGCCCACGGGTTACTTGCAATATATTTGGATTTTATTTTTGCGTTCAGTCAGCTGAGTACAACCCAATCTACTTGCAAGGGAGAGTTGAGAACTTTATAAATAGTCTGGAGGAGTTGTTGCAAGGACTGGACGATGACTCTTTTGAGGATTACAGAGCTGGGCTAATTGCAAAGCTGTTGGAGAAAGATCCATCCCTCCATTATGAAACCAATCGATATTGGTTACAGATTACCGATAAAATGTATATGTTTGACTATACAAAACAGGAGGCAGAACGACTCAGGAGCATTCAGAAGGAGGATGTCATCAACTGGTACAAAACATATTTGCAACAATCATCTCCCAAGTGTCGGAGACTTGCAATTCGTGTTTGGGGATGCAACACAGACTTGAAAGAGGCTGAAGCACGGCCGGAGTCTGTACAAGTCATTGAAGACCTTGCAGCCTTTAAGATGTCATCTGAGTTCTATCCAAGCATTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 ko04626 map04016 map04075 map04626
Pfam Domains
Protein Families
CAP

Protein Analysis

936

Amino Acids

108.51

Weight (kDa)

4.93

Isoelectric Point (pI)

47.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M16 PF00675 72 - 144 8.5e-09 Insulinase (Peptidase family M16)
Peptidase_M16_C PF05193 170 - 350 1.3e-17 Peptidase M16 inactive domain
Peptidase_M16_M PF16187 357 - 640 7.1e-91 Middle or third domain of peptidase_M16
Peptidase_M16_C PF05193 645 - 830 4.7e-18 Peptidase M16 inactive domain
PqqF-like_C_4 PF22456 750 - 849 3e-25 PQQ synthase PqqF-like, C-terminal lobe domain 4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2423
AccB1I GGYRCC 1 cut(s) 278
AccBSI CCGCTC 2 cut(s) 340, 2203
AccI GTMKAC 4 cut(s) 987, 1468, 1710, 1983
AccII CGCG 1 cut(s) 1528
AciI CCGC 7 cut(s) 340, 397, 508, 665, 1526, 1528, 2203
AclWI GGATC 3 cut(s) 506, 2222, 2507
AcoI YGGCCR 1 cut(s) 2735
AcsI RAATTY 6 cut(s) 166, 656, 1067, 1123, 2008, 2170
AcuI CTGAAG 2 cut(s) 122, 2748
AfaI GTAC 9 cut(s) 162, 348, 530, 594, 1499, 2067, 2384, 2642, 2748
AfiI CCNNNNNNNGG 5 cut(s) 339, 1295, 1562, 1971, 2676
AflIII ACRYGT 1 cut(s) 1147
AjnI CCWGG 3 cut(s) 372, 430, 1977
AjuI GAANNNNNNNTTGG 4 cut(s) 593, 625, 1278, 1310
AloI GAACNNNNNNTCC 2 cut(s) 886, 918
Alw26I GTCTC 1 cut(s) 2674
AlwI GGATC 3 cut(s) 506, 2222, 2507
AlwNI CAGNNNCTG 2 cut(s) 379, 1753
AoxI GGCC 3 cut(s) 1993, 2326, 2735
ApeKI GCWGC 5 cut(s) 872, 1087, 1139, 2302, 2768
ApoI RAATTY 6 cut(s) 166, 656, 1067, 1123, 2008, 2170
ArsI GACNNNNNNTTYG 2 cut(s) 2673, 2705
Asp700I GAANNNNTTC 2 cut(s) 408, 1397
AspLEI GCGC 1 cut(s) 2094
AspS9I GGNCC 6 cut(s) 638, 671, 1161, 1351, 1974, 2327
AsuHPI GGTGA 5 cut(s) 303, 420, 428, 1498, 2188
AvaII GGWCC 5 cut(s) 638, 671, 1161, 1351, 1974
AxyI CCTNAGG 1 cut(s) 1092
BaeI ACNNNNGTAYC 2 cut(s) 1659, 1692
BanI GGYRCC 1 cut(s) 278
BarI GAAGNNNNNNTAC 4 cut(s) 1481, 1513, 2058, 2090
BbsI GAAGAC 4 cut(s) 51, 66, 2105, 2766
BbvI GCAGC 5 cut(s) 859, 1099, 1151, 2314, 2780
BccI CCATC 4 cut(s) 89, 1336, 1424, 2524
BceAI ACGGC 1 cut(s) 2750
BciT130I CCWGG 3 cut(s) 374, 432, 1979
BciVI GTATCC 2 cut(s) 1045, 1618
BcoDI GTCTC 1 cut(s) 2674
BfaI CTAG 3 cut(s) 563, 704, 1650
BfmI CTRYAG 4 cut(s) 354, 380, 1046, 1443
BfuI GTATCC 2 cut(s) 1045, 1618
BglII AGATCT 2 cut(s) 649, 2245
BisI GCNGC 6 cut(s) 397, 873, 1088, 1140, 2303, 2769
BlsI GCNGC 6 cut(s) 398, 874, 1089, 1141, 2304, 2770
Bme1390I CCNGG 3 cut(s) 374, 432, 1979
Bme18I GGWCC 5 cut(s) 638, 671, 1161, 1351, 1974
BmgT120I GGNCC 6 cut(s) 638, 671, 1161, 1351, 1974, 2327
BmiI GGNNCC 6 cut(s) 280, 640, 1162, 1353, 1976, 2271
BmrFI CCNGG 3 cut(s) 374, 432, 1979
BmrI ACTGGG 1 cut(s) 1065
BmsI GCATC 7 cut(s) 205, 379, 885, 907, 1018, 1387, 2693
BmuI ACTGGG 1 cut(s) 1065
BpiI GAAGAC 4 cut(s) 51, 66, 2105, 2766
BplI GAGNNNNNCTC 2 cut(s) 255, 287
BpmI CTGGAG 3 cut(s) 1341, 1718, 2453
Bpu10I CCTNAGC 1 cut(s) 2288
BpuEI CTTGAG 4 cut(s) 257, 496, 617, 1888
Bsa29I ATCGAT 2 cut(s) 1193, 2539
BsaJI CCNNGG 8 cut(s) 333, 486, 544, 805, 1289, 1526, 1977, 2330
BsaXI ACNNNNNCTCC 6 cut(s) 1441, 1471, 1808, 1838, 2426, 2456
Bsc4I CCNNNNNNNGG 5 cut(s) 339, 1295, 1562, 1971, 2676
Bse1I ACTGG 5 cut(s) 1060, 1279, 1476, 2457, 2642
Bse21I CCTNAGG 1 cut(s) 1092
Bse3DI GCAATG 3 cut(s) 487, 746, 1373
BseBI CCWGG 3 cut(s) 374, 432, 1979
BseCI ATCGAT 2 cut(s) 1193, 2539
BseDI CCNNGG 8 cut(s) 333, 486, 544, 805, 1289, 1526, 1977, 2330
BseLI CCNNNNNNNGG 5 cut(s) 339, 1295, 1562, 1971, 2676
BseMI GCAATG 3 cut(s) 487, 746, 1373
BseNI ACTGG 5 cut(s) 1060, 1279, 1476, 2457, 2642
BseRI GAGGAG 7 cut(s) 41, 44, 47, 591, 1097, 1604, 2450
BseX3I CGGCCG 1 cut(s) 2735
BseXI GCAGC 5 cut(s) 859, 1099, 1151, 2314, 2780
BseYI CCCAGC 1 cut(s) 2483
Bsh1236I CGCG 1 cut(s) 1528
Bsh1285I CGRYCG 1 cut(s) 2738
BshFI GGCC 3 cut(s) 1995, 2328, 2737
BshNI GGYRCC 1 cut(s) 278
BshVI ATCGAT 2 cut(s) 1193, 2539
BsiEI CGRYCG 1 cut(s) 2738
BsiSI CCGG 1 cut(s) 2738
BslFI GGGAC 4 cut(s) 624, 1003, 1960, 2206
BslI CCNNNNNNNGG 5 cut(s) 339, 1295, 1562, 1971, 2676
BsmAI GTCTC 1 cut(s) 2674
BsmFI GGGAC 4 cut(s) 624, 1003, 1960, 2206
BsmI GAATGC 2 cut(s) 832, 2613
BsnI GGCC 3 cut(s) 1995, 2328, 2737
Bsp1407I TGTACA 3 cut(s) 528, 2065, 2746
Bsp143I GATC 7 cut(s) 498, 649, 1194, 1786, 2214, 2245, 2512
Bsp19I CCATGG 3 cut(s) 333, 486, 544
BspACI CCGC 7 cut(s) 340, 397, 508, 665, 1526, 1528, 2203
BspANI GGCC 3 cut(s) 1995, 2328, 2737
BspDI ATCGAT 2 cut(s) 1193, 2539
BspFNI CGCG 1 cut(s) 1528
BspLI GGNNCC 6 cut(s) 280, 640, 1162, 1353, 1976, 2271
BspMAI CTGCAG 2 cut(s) 384, 1050
BspPI GGATC 3 cut(s) 506, 2222, 2507
BspT107I GGYRCC 1 cut(s) 278
BsrBI CCGCTC 2 cut(s) 340, 2203
BsrDI GCAATG 3 cut(s) 487, 746, 1373
BsrGI TGTACA 3 cut(s) 528, 2065, 2746
BsrI ACTGG 5 cut(s) 1060, 1279, 1476, 2457, 2642
BssECI CCNNGG 8 cut(s) 333, 486, 544, 805, 1289, 1526, 1977, 2330
BssMI GATC 7 cut(s) 498, 649, 1194, 1786, 2214, 2245, 2512
BssNAI GTATAC 2 cut(s) 1469, 1984
BssT1I CCWWGG 5 cut(s) 333, 486, 544, 805, 1289
Bst1107I GTATAC 2 cut(s) 1469, 1984
Bst2UI CCWGG 3 cut(s) 374, 432, 1979
Bst4CI ACNGT 5 cut(s) 193, 1715, 1935, 2103, 2317
Bst6I CTCTTC 1 cut(s) 1574
BstAUI TGTACA 3 cut(s) 528, 2065, 2746
BstC8I GCNNGC 2 cut(s) 394, 1530
BstDSI CCRYGG 5 cut(s) 333, 486, 544, 1526, 2330
BstEII GGTNACC 1 cut(s) 434
BstFNI CGCG 1 cut(s) 1528
BstHHI GCGC 1 cut(s) 2094
BstKTI GATC 7 cut(s) 501, 652, 1197, 1789, 2217, 2248, 2515
BstMAI GTCTC 1 cut(s) 2674
BstMBI GATC 7 cut(s) 498, 649, 1194, 1786, 2214, 2245, 2512
BstMCI CGRYCG 1 cut(s) 2738
BstMWI GCNNNNNNNGC 1 cut(s) 1655
BstNI CCWGG 3 cut(s) 374, 432, 1979
BstNSI RCATGY 3 cut(s) 147, 1151, 1922
BstPI GGTNACC 1 cut(s) 434
BstSCI CCNGG 3 cut(s) 372, 430, 1977
BstSFI CTRYAG 4 cut(s) 354, 380, 1046, 1443
BstUI CGCG 1 cut(s) 1528
BstV1I GCAGC 5 cut(s) 859, 1099, 1151, 2314, 2780
BstV2I GAAGAC 4 cut(s) 51, 66, 2105, 2766
BstX2I RGATCY 3 cut(s) 649, 2245, 2512
BstXI CCANNNNNNTGG 1 cut(s) 1029
BstYI RGATCY 3 cut(s) 649, 2245, 2512
BstZ17I GTATAC 2 cut(s) 1469, 1984
BstZI CGGCCG 1 cut(s) 2735
Bsu15I ATCGAT 2 cut(s) 1193, 2539
Bsu36I CCTNAGG 1 cut(s) 1092
BsuI GTATCC 2 cut(s) 1045, 1618
BsuRI GGCC 3 cut(s) 1995, 2328, 2737
BsuTUI ATCGAT 2 cut(s) 1193, 2539
BtgI CCRYGG 5 cut(s) 333, 486, 544, 1526, 2330
BtsI GCAGTG 1 cut(s) 2101
BtsIMutI CAGTG 5 cut(s) 942, 1286, 2101, 2108, 2152
Cac8I GCNNGC 2 cut(s) 394, 1530
CaiI CAGNNNCTG 2 cut(s) 379, 1753
CfoI GCGC 1 cut(s) 2094
Cfr13I GGNCC 6 cut(s) 638, 671, 1161, 1351, 1974, 2327
Cfr42I CCGCGG 1 cut(s) 1529
ClaI ATCGAT 2 cut(s) 1193, 2539
CsiI ACCWGGT 2 cut(s) 372, 430
Csp6I GTAC 9 cut(s) 161, 347, 529, 593, 1498, 2066, 2383, 2641, 2747
CviQI GTAC 9 cut(s) 161, 347, 529, 593, 1498, 2066, 2383, 2641, 2747
DpnI GATC 7 cut(s) 500, 651, 1196, 1788, 2216, 2247, 2514
DpnII GATC 7 cut(s) 498, 649, 1194, 1786, 2214, 2245, 2512
DraI TTTAAA 2 cut(s) 1519, 2050
EaeI YGGCCR 1 cut(s) 2735
EagI CGGCCG 1 cut(s) 2735
Eam1104I CTCTTC 1 cut(s) 1574
EarI CTCTTC 1 cut(s) 1574
EciI GGCGGA 1 cut(s) 680
EclXI CGGCCG 1 cut(s) 2735
Eco130I CCWWGG 5 cut(s) 333, 486, 544, 805, 1289
Eco147I AGGCCT 1 cut(s) 1995
Eco47I GGWCC 5 cut(s) 638, 671, 1161, 1351, 1974
Eco52I CGGCCG 1 cut(s) 2735
Eco57I CTGAAG 2 cut(s) 122, 2748
Eco81I CCTNAGG 1 cut(s) 1092
Eco91I GGTNACC 1 cut(s) 434
EcoO109I RGGNCCY 3 cut(s) 638, 1161, 1351
EcoO65I GGTNACC 1 cut(s) 434
EcoRI GAATTC 1 cut(s) 656
EcoRII CCWGG 3 cut(s) 372, 430, 1977
EcoT14I CCWWGG 5 cut(s) 333, 486, 544, 805, 1289
EcoT22I ATGCAT 2 cut(s) 220, 900
ErhI CCWWGG 5 cut(s) 333, 486, 544, 805, 1289
FalI AAGNNNNNCTT 2 cut(s) 266, 298
FaqI GGGAC 4 cut(s) 624, 1003, 1960, 2206
FauI CCCGC 4 cut(s) 333, 501, 1521, 2196
FblI GTMKAC 4 cut(s) 987, 1468, 1710, 1983
Fnu4HI GCNGC 6 cut(s) 397, 873, 1088, 1140, 2303, 2769
Fsp4HI GCNGC 6 cut(s) 397, 873, 1088, 1140, 2303, 2769
FspBI CTAG 3 cut(s) 563, 704, 1650
GlaI GCGC 1 cut(s) 2093
GluI GCNGC 6 cut(s) 397, 873, 1088, 1140, 2303, 2769
GsaI CCCAGC 1 cut(s) 2487
GsuI CTGGAG 3 cut(s) 1341, 1718, 2453
HaeIII GGCC 3 cut(s) 1995, 2328, 2737
HapII CCGG 1 cut(s) 2738
HhaI GCGC 1 cut(s) 2094
Hin6I GCGC 1 cut(s) 2092
HinP1I GCGC 1 cut(s) 2092
HindIII AAGCTT 2 cut(s) 472, 1727
HpaII CCGG 1 cut(s) 2738
HphI GGTGA 5 cut(s) 303, 420, 428, 1498, 2188
Hpy166II GTNNAC 8 cut(s) 697, 988, 1469, 1711, 1931, 1984, 2066, 2099
Hpy8I GTNNAC 8 cut(s) 697, 988, 1469, 1711, 1931, 1984, 2066, 2099
Hpy99I CGWCG 1 cut(s) 53
HpyAV CCTTC 9 cut(s) 11, 68, 662, 767, 1342, 1985, 2130, 2290, 2614
HpyCH4III ACNGT 5 cut(s) 193, 1715, 1935, 2103, 2317
HpyCH4IV ACGT 1 cut(s) 627
HpyF10VI GCNNNNNNNGC 1 cut(s) 1655
HpySE526I ACGT 1 cut(s) 627
HspAI GCGC 1 cut(s) 2092
KspI CCGCGG 1 cut(s) 1529
Kzo9I GATC 7 cut(s) 498, 649, 1194, 1786, 2214, 2245, 2512
LmnI GCTCC 6 cut(s) 337, 1084, 1699, 1816, 2299, 2610
Lsp1109I GCAGC 5 cut(s) 859, 1099, 1151, 2314, 2780
LweI GCATC 7 cut(s) 205, 379, 885, 907, 1018, 1387, 2693
MabI ACCWGGT 2 cut(s) 372, 430
MaeI CTAG 3 cut(s) 563, 704, 1650
MaeII ACGT 1 cut(s) 627
MaeIII GTNAC 8 cut(s) 193, 434, 623, 1299, 1743, 1853, 2335, 2547
MalI GATC 7 cut(s) 500, 651, 1196, 1788, 2216, 2247, 2514
MbiI CCGCTC 2 cut(s) 340, 2203
MboI GATC 7 cut(s) 498, 649, 1194, 1786, 2214, 2245, 2512
MfeI CAATTG 1 cut(s) 2079
MflI RGATCY 3 cut(s) 649, 2245, 2512
MlyI GAGTC 6 cut(s) 941, 1861, 2228, 2456, 2598, 2750
MmeI TCCRAC 2 cut(s) 2484, 2657
Mph1103I ATGCAT 2 cut(s) 220, 900
MroXI GAANNNNTTC 2 cut(s) 408, 1397
MslI CAYNNNNRTG 3 cut(s) 751, 1027, 1838
MspA1I CMGCKG 2 cut(s) 1528, 2378
MspI CCGG 1 cut(s) 2738
MspR9I CCNGG 3 cut(s) 374, 432, 1979
MunI CAATTG 1 cut(s) 2079
Mva1269I GAATGC 2 cut(s) 832, 2613
MvaI CCWGG 3 cut(s) 374, 432, 1979
MvnI CGCG 1 cut(s) 1528
MwoI GCNNNNNNNGC 1 cut(s) 1655
NcoI CCATGG 3 cut(s) 333, 486, 544
NdeII GATC 7 cut(s) 498, 649, 1194, 1786, 2214, 2245, 2512
NlaIV GGNNCC 6 cut(s) 280, 640, 1162, 1353, 1976, 2271
NmuCI GTSAC 4 cut(s) 434, 1299, 1743, 1853
NsiI ATGCAT 2 cut(s) 220, 900
NspI RCATGY 3 cut(s) 147, 1151, 1922
PceI AGGCCT 1 cut(s) 1995
PciI ACATGT 1 cut(s) 1147
PctI GAATGC 2 cut(s) 832, 2613
PdmI GAANNNNTTC 2 cut(s) 408, 1397
PfeI GAWTC 6 cut(s) 122, 359, 581, 1190, 1750, 1893
PkrI GCNGC 6 cut(s) 398, 874, 1089, 1141, 2304, 2770
PleI GAGTC 6 cut(s) 941, 1860, 2227, 2456, 2598, 2749
PpsI GAGTC 6 cut(s) 941, 1860, 2227, 2456, 2598, 2749
PpuMI RGGWCCY 3 cut(s) 638, 1161, 1351
PscI ACATGT 1 cut(s) 1147
PsiI TTATAA 1 cut(s) 2423
Psp5II RGGWCCY 3 cut(s) 638, 1161, 1351
Psp6I CCWGG 3 cut(s) 372, 430, 1977
PspEI GGTNACC 1 cut(s) 434
PspFI CCCAGC 1 cut(s) 2483
PspGI CCWGG 3 cut(s) 372, 430, 1977
PspN4I GGNNCC 6 cut(s) 280, 640, 1162, 1353, 1976, 2271
PspPI GGNCC 6 cut(s) 638, 671, 1161, 1351, 1974, 2327
PspPPI RGGWCCY 3 cut(s) 638, 1161, 1351
PstI CTGCAG 2 cut(s) 384, 1050
PstNI CAGNNNCTG 2 cut(s) 379, 1753
PsuI RGATCY 3 cut(s) 649, 2245, 2512
PvuII CAGCTG 1 cut(s) 2378
RsaI GTAC 9 cut(s) 162, 348, 530, 594, 1499, 2067, 2384, 2642, 2748
RsaNI GTAC 9 cut(s) 161, 347, 529, 593, 1498, 2066, 2383, 2641, 2747
RseI CAYNNNNRTG 3 cut(s) 751, 1027, 1838
SacII CCGCGG 1 cut(s) 1529
SatI GCNGC 6 cut(s) 397, 873, 1088, 1140, 2303, 2769
Sau3AI GATC 7 cut(s) 498, 649, 1194, 1786, 2214, 2245, 2512
Sau96I GGNCC 6 cut(s) 638, 671, 1161, 1351, 1974, 2327
SchI GAGTC 6 cut(s) 941, 1861, 2228, 2456, 2598, 2750
ScrFI CCNGG 3 cut(s) 374, 432, 1979
SexAI ACCWGGT 2 cut(s) 372, 430
SfaNI GCATC 7 cut(s) 205, 379, 885, 907, 1018, 1387, 2693
SfcI CTRYAG 4 cut(s) 354, 380, 1046, 1443
Sfr303I CCGCGG 1 cut(s) 1529
SgrBI CCGCGG 1 cut(s) 1529
SinI GGWCC 5 cut(s) 638, 671, 1161, 1351, 1974
SmiMI CAYNNNNRTG 3 cut(s) 751, 1027, 1838
SmlI CTYRAG 4 cut(s) 272, 475, 596, 1867
SmoI CTYRAG 4 cut(s) 272, 475, 596, 1867
SseBI AGGCCT 1 cut(s) 1995
SsiI CCGC 7 cut(s) 340, 397, 508, 665, 1526, 1528, 2203
SspI AATATT 1 cut(s) 519
SspMI CTAG 3 cut(s) 563, 704, 1650
StuI AGGCCT 1 cut(s) 1995
StyD4I CCNGG 3 cut(s) 372, 430, 1977
StyI CCWWGG 5 cut(s) 333, 486, 544, 805, 1289
TaaI ACNGT 5 cut(s) 193, 1715, 1935, 2103, 2317
TaiI ACGT 1 cut(s) 630
TaqI TCGA 4 cut(s) 1193, 1685, 2217, 2539
TatI WGTACW 6 cut(s) 160, 528, 592, 2065, 2382, 2746
TauI GCSGC 1 cut(s) 399
TfiI GAWTC 6 cut(s) 122, 359, 581, 1190, 1750, 1893
TscAI CASTG 5 cut(s) 949, 1286, 2101, 2108, 2152
TseFI GTSAC 4 cut(s) 434, 1299, 1743, 1853
TseI GCWGC 5 cut(s) 872, 1087, 1139, 2302, 2768
Tsp45I GTSAC 4 cut(s) 434, 1299, 1743, 1853
TspGWI ACGGA 2 cut(s) 239, 1535
TspRI CASTG 5 cut(s) 949, 1286, 2101, 2108, 2152
VpaK11BI GGWCC 5 cut(s) 638, 671, 1161, 1351, 1974
XapI RAATTY 6 cut(s) 166, 656, 1067, 1123, 2008, 2170
XceI RCATGY 3 cut(s) 147, 1151, 1922
XmiI GTMKAC 4 cut(s) 987, 1468, 1710, 1983
XmnI GAANNNNTTC 2 cut(s) 408, 1397
XspI CTAG 3 cut(s) 563, 704, 1650
Zsp2I ATGCAT 2 cut(s) 220, 900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.