Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0012334

Physical Location & Seq

Genomic Coordinates Forward (+)

74696461 .. 74698246

Gene Structure 1786 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0557600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGATTATGGGGTTTTCATTGCATCTGTTTCTTCTATTTGTTCACTTGGCTATATGTTCTTCGAAGCAAACATTCCCCTATATGACTTCAAATGTCGAAGAAGTAGCCGGTAGGTCCTTCGACTACATTGTGGTTGGCGGAGGCACTGCGGGCTGCCCGCTAGCTGCAACCTTGTCTGAGAAATTCTCAGTGCTGTTGGTGGAACGAGGTGGCTCGCCTTACGGGGACCCCTTCATCTTAGAGTTGAAGTACTACGGATATTCATATCTCGTAACTGATGAATATGCATCAGCTGCACAAAGCTTTGTCTCGACAGATGGTGTTCCCAATTTCAGAGGAAGAGTGCTAGGAGGATCATCCGCTATCAATGGTGGGTTTTACGGCAGAGCAAGTAAGGATTTTGTCAAAAAGGTTGGTTGGGATAATGAGGGAGTAAGGGATGCTTATGAATGGGTGGAATCTAGAATCATCTCTAAACCTGATCATTTGACTCCGTGGTCGCATGCTGTTGCGTTAAGCTTTGTTGAAGCTGGAATTCTCCCCTATAATGGTTTCAGTTTGGAGCATATTCAGGGAACAAAAATTGGTGCTACTCTGTTCGATAACAAGGGAAGAAGACACTTACCAGCTGATCTTCTACCGGCAGGAAATCCAAGCAAGATCACAGTTCTCTTGAATGCAACCGTAGACAAAGTTATCTTTCAGAGAACTGGTACCAGTGATGAGAAGATAGCTCAAGGTATAAGATTCATCAAGAGCGATGGCAGCTCAAACCAGACTTATGAAGCTTACCTCAACCAGCCAGACAACTCGGGTTCATGGGGTGATGTGATACTATCAGCAGGAGCTTTAGGCAGCCCTCAGATTTTGTTGTTAAGTGGCATTGGCCCTCAAGAACACCTAAAAAACTTCGAAATCCCGCTCGTACTCAACTTGAAGGGAGTAGGAGAAGGAATGAAAGACAATGCTGCTACTGCACTCTTCATCAACTACAACCCGAAGAATCCAACACCAGAACATTCCAAAGCTGCTGGTATAGCAGATGACTTCAAAATCATGACCGAGGCAACAATTGCACCTGCTAGCTTGAATGGAACAACTGTTAGCTTTTTTGTTGGCAAAATTGCCTTCCCAGAATCCGTAGGAAAGCTTGAACTCAACAGCACTGACCCCAGAGCAAACCCATCAGTGACATTCAACTACCTATCAAGCGAGAAAGACTTGGCAGCATGTGTGAAGATGACCGAGCTGCTTGAGCTAGCTTTAAGGTCCAAATCAATTGCTTCTTTCGTGGGTTCGAATGAATACCGAAACAAGACGATGCCTACTAAAGACGAGCTCCAGGAACTCTGCAAGACGACTGTCCGTACCGTCTACCACTACCATGGTGGTTGCAATGTGGGGTCGGTGGTCGACAAGAATTATAGGGTTCATGGTGTTAAAGGCTTGAGAGTGATTGATGGGTCAACCTTCCTGGAATCACCAGGCACAAACCCAATGGCCACTGTGCTGATGCTTGGAAGATACCAGGGGCTCAAAATTCTTCAAGAAAGAAAAGATGCTTCCTTTAACAATCCCAGAACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1168

Protein Analysis

528

Amino Acids

57.31

Weight (kDa)

6.84

Isoelectric Point (pI)

28.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GMC_oxred_N	PF00732	40 - 321	1.2e-14	GMC oxidoreductase
GMC_oxred_C	PF05199	378 - 507	1.9e-30	GMC oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012334)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15270 AT2G15270
fragaria_vesca	FvH4_2g05220
malus_domestica	MD05G1088900.v1.1 MD05G1089500.v1.1
prunus_persica	Prupe.8G134800_v2.0.a1
pyrus_communis	pycom05g08820 pycom10g08290
rosa_chinensis	RchiOBHm_Chr6g0255351
rosa_laevigata	RLG00000014845
rosa_multiflora	Rmu_sc0000903.1_g000034 Rmu_sc0002360.1_g000020
rosa_roxburghii	Rroxscaffold_7G00210060
rosa_rugosa	Rorug05G0557500 Rorug05G0557600
rosa_samantha	Rh6AG075700 Rh6BG067800 Rh6CG067600 Rh6DG064200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1087
AasI	GACNNNNNNGTC	1 cut(s)	496
Acc36I	ACCTGC	1 cut(s)	1087
Acc65I	GGTACC	1 cut(s)	713
AccB1I	GGYRCC	1 cut(s)	713
AccBSI	CCGCTC	1 cut(s)	922
AccI	GTMKAC	3 cut(s)	687, 1374, 1413
AciI	CCGC	5 cut(s)	138, 149, 158, 360, 920
AclWI	GGATC	1 cut(s)	361
AcoI	YGGCCR	1 cut(s)	1500
AcsI	RAATTY	3 cut(s)	182, 534, 1539
AfaI	GTAC	4 cut(s)	251, 715, 927, 1369
AfiI	CCNNNNNNNGG	1 cut(s)	548
AjnI	CCWGG	4 cut(s)	1341, 1473, 1483, 1527
Alw21I	GWGCWC	1 cut(s)	1341
Alw26I	GTCTC	1 cut(s)	313
AlwI	GGATC	1 cut(s)	361
AlwNI	CAGNNNCTG	1 cut(s)	1584
Ama87I	CYCGRG	1 cut(s)	811
AoxI	GGCC	2 cut(s)	886, 1500
ApeKI	GCWGC	9 cut(s)	153, 164, 293, 765, 855, 968, 1028, 1226, 1249
ApoI	RAATTY	3 cut(s)	182, 534, 1539
Asp718I	GGTACC	1 cut(s)	713
AspS9I	GGNCC	4 cut(s)	114, 226, 887, 1269
AsuHPI	GGTGA	2 cut(s)	836, 1473
AsuII	TTCGAA	3 cut(s)	62, 912, 1298
AsuNHI	GCTAGC	3 cut(s)	160, 1082, 1258
AvaI	CYCGRG	1 cut(s)	811
AvaII	GGWCC	3 cut(s)	114, 226, 1269
BalI	TGGCCA	1 cut(s)	1502
BanI	GGYRCC	1 cut(s)	713
BanII	GRGCYC	2 cut(s)	1341, 1536
BbsI	GAAGAC	1 cut(s)	622
Bbv12I	GWGCWC	1 cut(s)	1341
BbvI	GCAGC	9 cut(s)	140, 151, 280, 777, 867, 955, 1015, 1236, 1238
BccI	CCATC	4 cut(s)	311, 755, 1192, 1454
BceAI	ACGGC	1 cut(s)	397
BciT130I	CCWGG	4 cut(s)	1343, 1475, 1485, 1529
BclI	TGATCA	1 cut(s)	481
BcoDI	GTCTC	1 cut(s)	313
BfaI	CTAG	5 cut(s)	161, 347, 462, 1083, 1259
BfuAI	ACCTGC	1 cut(s)	1087
BisI	GCNGC	9 cut(s)	154, 165, 294, 766, 856, 969, 1029, 1227, 1250
BlsI	GCNGC	9 cut(s)	155, 166, 295, 767, 857, 970, 1030, 1228, 1251
BmcAI	AGTACT	1 cut(s)	251
Bme1390I	CCNGG	4 cut(s)	1343, 1475, 1485, 1529
Bme18I	GGWCC	3 cut(s)	114, 226, 1269
BmeT110I	CYCGRG	1 cut(s)	811
BmgT120I	GGNCC	4 cut(s)	114, 226, 887, 1269
BmiI	GGNNCC	3 cut(s)	227, 228, 715
BmrFI	CCNGG	4 cut(s)	1343, 1475, 1485, 1529
BmsI	GCATC	6 cut(s)	31, 296, 430, 1311, 1503, 1549
BmtI	GCTAGC	3 cut(s)	164, 1086, 1262
BoxI	GACNNNNGTC	1 cut(s)	1361
BpiI	GAAGAC	1 cut(s)	622
BplI	GAGNNNNNCTC	2 cut(s)	170, 202
BpmI	CTGGAG	1 cut(s)	1325
Bpu14I	TTCGAA	3 cut(s)	62, 912, 1298
BpuEI	CTTGAG	4 cut(s)	720, 876, 1274, 1468
BsaJI	CCNNGG	4 cut(s)	494, 1062, 1384, 1528
Bsc4I	CCNNNNNNNGG	1 cut(s)	548
Bse118I	RCCGGY	2 cut(s)	107, 640
Bse1I	ACTGG	2 cut(s)	715, 717
Bse3DI	GCAATG	2 cut(s)	17, 1402
BseBI	CCWGG	4 cut(s)	1343, 1475, 1485, 1529
BseDI	CCNNGG	4 cut(s)	494, 1062, 1384, 1528
BseGI	GGATG	2 cut(s)	356, 445
BseLI	CCNNNNNNNGG	1 cut(s)	548
BseMI	GCAATG	2 cut(s)	17, 1402
BseMII	CTCAG	3 cut(s)	168, 201, 875
BseNI	ACTGG	2 cut(s)	715, 717
BseXI	GCAGC	9 cut(s)	140, 151, 280, 777, 867, 955, 1015, 1236, 1238
BsgI	GTGCAG	2 cut(s)	279, 960
BshFI	GGCC	2 cut(s)	888, 1502
BshNI	GGYRCC	1 cut(s)	713
BsiHKAI	GWGCWC	1 cut(s)	1341
BsiHKCI	CYCGRG	1 cut(s)	811
BsiSI	CCGG	2 cut(s)	108, 641
BslFI	GGGAC	1 cut(s)	239
BslI	CCNNNNNNNGG	1 cut(s)	548
BsmAI	GTCTC	1 cut(s)	313
BsmFI	GGGAC	1 cut(s)	239
BsmI	GAATGC	1 cut(s)	682
BsnI	GGCC	2 cut(s)	888, 1502
BsoBI	CYCGRG	1 cut(s)	811
Bsp119I	TTCGAA	3 cut(s)	62, 912, 1298
Bsp1286I	GDGCHC	2 cut(s)	1341, 1536
Bsp143I	GATC	4 cut(s)	353, 481, 631, 660
Bsp19I	CCATGG	1 cut(s)	1384
BspACI	CCGC	5 cut(s)	138, 149, 158, 360, 920
BspANI	GGCC	2 cut(s)	888, 1502
BspCNI	CTCAG	3 cut(s)	169, 200, 874
BspHI	TCATGA	1 cut(s)	1056
BspLI	GGNNCC	3 cut(s)	227, 228, 715
BspMI	ACCTGC	1 cut(s)	1087
BspOI	GCTAGC	3 cut(s)	164, 1086, 1262
BspPI	GGATC	1 cut(s)	361
BspT104I	TTCGAA	3 cut(s)	62, 912, 1298
BspT107I	GGYRCC	1 cut(s)	713
BsrBI	CCGCTC	1 cut(s)	922
BsrDI	GCAATG	2 cut(s)	17, 1402
BsrFI	RCCGGY	2 cut(s)	107, 640
BsrI	ACTGG	2 cut(s)	715, 717
BssAI	RCCGGY	2 cut(s)	107, 640
BssECI	CCNNGG	4 cut(s)	494, 1062, 1384, 1528
BssMI	GATC	4 cut(s)	353, 481, 631, 660
BssT1I	CCWWGG	1 cut(s)	1384
Bst2UI	CCWGG	4 cut(s)	1343, 1475, 1485, 1529
Bst4CI	ACNGT	6 cut(s)	667, 685, 1102, 1363, 1372, 1507
Bst6I	CTCTTC	2 cut(s)	334, 986
BstAPI	GCANNNNNTGC	2 cut(s)	293, 1073
BstBI	TTCGAA	3 cut(s)	62, 912, 1298
BstC8I	GCNNGC	7 cut(s)	151, 158, 162, 215, 504, 1084, 1260
BstDEI	CTNAG	4 cut(s)	177, 187, 238, 861
BstDSI	CCRYGG	2 cut(s)	494, 1384
BstF5I	GGATG	2 cut(s)	356, 445
BstKTI	GATC	4 cut(s)	356, 484, 634, 663
BstMAI	GTCTC	1 cut(s)	313
BstMBI	GATC	4 cut(s)	353, 481, 631, 660
BstMWI	GCNNNNNNNGC	7 cut(s)	150, 293, 765, 974, 1037, 1073, 1255
BstNI	CCWGG	4 cut(s)	1343, 1475, 1485, 1529
BstNSI	RCATGY	2 cut(s)	506, 1233
BstPAI	GACNNNNGTC	1 cut(s)	1361
BstSCI	CCNGG	4 cut(s)	1341, 1473, 1483, 1527
BstV1I	GCAGC	9 cut(s)	140, 151, 280, 777, 867, 955, 1015, 1236, 1238
BstV2I	GAAGAC	1 cut(s)	622
BstXI	CCANNNNNNTGG	1 cut(s)	1385
BsuRI	GGCC	2 cut(s)	888, 1502
BtgI	CCRYGG	2 cut(s)	494, 1384
BtgZI	GCGATG	1 cut(s)	774
BtsCI	GGATG	2 cut(s)	356, 445
BtsI	GCAGTG	1 cut(s)	144
BtsIMutI	CAGTG	6 cut(s)	144, 195, 724, 1164, 1194, 1503
BveI	ACCTGC	1 cut(s)	1087
Cac8I	GCNNGC	7 cut(s)	151, 158, 162, 215, 504, 1084, 1260
CaiI	CAGNNNCTG	1 cut(s)	1584
CciI	TCATGA	1 cut(s)	1056
Cfr10I	RCCGGY	2 cut(s)	107, 640
Cfr13I	GGNCC	4 cut(s)	114, 226, 887, 1269
Csp6I	GTAC	4 cut(s)	250, 714, 926, 1368
CviAII	CATG	6 cut(s)	503, 819, 1057, 1230, 1385, 1433
CviQI	GTAC	4 cut(s)	250, 714, 926, 1368
DdeI	CTNAG	4 cut(s)	177, 187, 238, 861
DpnI	GATC	4 cut(s)	355, 483, 633, 662
DpnII	GATC	4 cut(s)	353, 481, 631, 660
DrdI	GACNNNNNNGTC	1 cut(s)	496
DseDI	GACNNNNNNGTC	1 cut(s)	496
EaeI	YGGCCR	1 cut(s)	1500
Eam1104I	CTCTTC	2 cut(s)	334, 986
EarI	CTCTTC	2 cut(s)	334, 986
EciI	GGCGGA	1 cut(s)	153
Ecl136II	GAGCTC	1 cut(s)	1339
Eco130I	CCWWGG	1 cut(s)	1384
Eco24I	GRGCYC	2 cut(s)	1341, 1536
Eco47I	GGWCC	3 cut(s)	114, 226, 1269
Eco53kI	GAGCTC	1 cut(s)	1339
Eco88I	CYCGRG	1 cut(s)	811
EcoICRI	GAGCTC	1 cut(s)	1339
EcoO109I	RGGNCCY	2 cut(s)	114, 226
EcoRI	GAATTC	1 cut(s)	534
EcoRII	CCWGG	4 cut(s)	1341, 1473, 1483, 1527
EcoT14I	CCWWGG	1 cut(s)	1384
EcoT22I	ATGCAT	1 cut(s)	289
EcoT38I	GRGCYC	2 cut(s)	1341, 1536
ErhI	CCWWGG	1 cut(s)	1384
FaeI	CATG	6 cut(s)	506, 822, 1060, 1233, 1388, 1436
FalI	AAGNNNNNCTT	2 cut(s)	427, 459
FaqI	GGGAC	1 cut(s)	239
FatI	CATG	6 cut(s)	502, 818, 1056, 1229, 1384, 1432
FauI	CCCGC	3 cut(s)	142, 165, 927
FbaI	TGATCA	1 cut(s)	481
FblI	GTMKAC	3 cut(s)	687, 1374, 1413
Fnu4HI	GCNGC	9 cut(s)	154, 165, 294, 766, 856, 969, 1029, 1227, 1250
FokI	GGATG	2 cut(s)	343, 452
FriOI	GRGCYC	2 cut(s)	1341, 1536
Fsp4HI	GCNGC	9 cut(s)	154, 165, 294, 766, 856, 969, 1029, 1227, 1250
FspBI	CTAG	5 cut(s)	161, 347, 462, 1083, 1259
GluI	GCNGC	9 cut(s)	154, 165, 294, 766, 856, 969, 1029, 1227, 1250
GsuI	CTGGAG	1 cut(s)	1325
HaeIII	GGCC	2 cut(s)	888, 1502
HapII	CCGG	2 cut(s)	108, 641
Hin1II	CATG	6 cut(s)	506, 822, 1060, 1233, 1388, 1436
HincII	GTYRAC	2 cut(s)	1414, 1467
HindII	GTYRAC	2 cut(s)	1414, 1467
HindIII	AAGCTT	4 cut(s)	301, 517, 786, 1148
HinfI	GANTC	7 cut(s)	458, 465, 490, 747, 1003, 1136, 1478
HpaII	CCGG	2 cut(s)	108, 641
HphI	GGTGA	2 cut(s)	836, 1473
Hpy166II	GTNNAC	5 cut(s)	43, 688, 1375, 1414, 1467
Hpy188I	TCNGA	4 cut(s)	178, 335, 705, 864
Hpy188III	TCNNGA	7 cut(s)	310, 462, 673, 754, 893, 1057, 1547
Hpy8I	GTNNAC	5 cut(s)	43, 688, 1375, 1414, 1467
HpyAV	CCTTC	6 cut(s)	127, 241, 931, 944, 1138, 1480
HpyCH4III	ACNGT	6 cut(s)	667, 685, 1102, 1363, 1372, 1507
HpyCH4V	TGCA	9 cut(s)	22, 167, 287, 296, 680, 977, 1076, 1353, 1395
HpyF10VI	GCNNNNNNNGC	7 cut(s)	150, 293, 765, 974, 1037, 1073, 1255
HpyF3I	CTNAG	4 cut(s)	177, 187, 238, 861
Hsp92II	CATG	6 cut(s)	506, 822, 1060, 1233, 1388, 1436
KflI	GGGWCCC	1 cut(s)	226
KpnI	GGTACC	1 cut(s)	717
Ksp22I	TGATCA	1 cut(s)	481
Kzo9I	GATC	4 cut(s)	353, 481, 631, 660
LmnI	GCTCC	3 cut(s)	562, 845, 1344
Lsp1109I	GCAGC	9 cut(s)	140, 151, 280, 777, 867, 955, 1015, 1236, 1238
LweI	GCATC	6 cut(s)	31, 296, 430, 1311, 1503, 1549
MaeI	CTAG	5 cut(s)	161, 347, 462, 1083, 1259
MaeIII	GTNAC	2 cut(s)	271, 1189
MalI	GATC	4 cut(s)	355, 483, 633, 662
MbiI	CCGCTC	1 cut(s)	922
MboI	GATC	4 cut(s)	353, 481, 631, 660
MfeI	CAATTG	2 cut(s)	1071, 1278
MhlI	GDGCHC	2 cut(s)	1341, 1536
MlsI	TGGCCA	1 cut(s)	1502
MluCI	AATT	9 cut(s)	182, 328, 534, 582, 1071, 1122, 1278, 1420, 1539
MluNI	TGGCCA	1 cut(s)	1502
MlyI	GAGTC	1 cut(s)	484
MmeI	TCCRAC	1 cut(s)	1031
MnlI	CCTC	9 cut(s)	134, 200, 329, 344, 421, 803, 870, 900, 1057
Mox20I	TGGCCA	1 cut(s)	1502
Mph1103I	ATGCAT	1 cut(s)	289
MscI	TGGCCA	1 cut(s)	1502
MseI	TTAA	5 cut(s)	515, 875, 1265, 1440, 1569
MslI	CAYNNNNRTG	1 cut(s)	1383
Msp20I	TGGCCA	1 cut(s)	1502
MspA1I	CMGCKG	2 cut(s)	293, 629
MspI	CCGG	2 cut(s)	108, 641
MspR9I	CCNGG	4 cut(s)	1343, 1475, 1485, 1529
MunI	CAATTG	2 cut(s)	1071, 1278
Mva1269I	GAATGC	1 cut(s)	682
MvaI	CCWGG	4 cut(s)	1343, 1475, 1485, 1529
MwoI	GCNNNNNNNGC	7 cut(s)	150, 293, 765, 974, 1037, 1073, 1255
NcoI	CCATGG	1 cut(s)	1384
NdeII	GATC	4 cut(s)	353, 481, 631, 660
NheI	GCTAGC	3 cut(s)	160, 1082, 1258
NlaIII	CATG	6 cut(s)	506, 822, 1060, 1233, 1388, 1436
NlaIV	GGNNCC	3 cut(s)	227, 228, 715
NmuCI	GTSAC	1 cut(s)	1189
NsiI	ATGCAT	1 cut(s)	289
NspI	RCATGY	2 cut(s)	506, 1233
NspV	TTCGAA	3 cut(s)	62, 912, 1298
PaeI	GCATGC	1 cut(s)	506
PagI	TCATGA	1 cut(s)	1056
PaqCI	CACCTGC	1 cut(s)	1087
PctI	GAATGC	1 cut(s)	682
PfeI	GAWTC	6 cut(s)	458, 465, 747, 1003, 1136, 1478
PfoI	TCCNGGA	2 cut(s)	1341, 1473
PkrI	GCNGC	9 cut(s)	155, 166, 295, 767, 857, 970, 1030, 1228, 1251
PleI	GAGTC	1 cut(s)	484
PpsI	GAGTC	1 cut(s)	484
PpuMI	RGGWCCY	2 cut(s)	114, 226
PshAI	GACNNNNGTC	1 cut(s)	1361
Psp124BI	GAGCTC	1 cut(s)	1341
Psp5II	RGGWCCY	2 cut(s)	114, 226
Psp6I	CCWGG	4 cut(s)	1341, 1473, 1483, 1527
PspGI	CCWGG	4 cut(s)	1341, 1473, 1483, 1527
PspN4I	GGNNCC	3 cut(s)	227, 228, 715
PspPI	GGNCC	4 cut(s)	114, 226, 887, 1269
PspPPI	RGGWCCY	2 cut(s)	114, 226
PstNI	CAGNNNCTG	1 cut(s)	1584
PvuII	CAGCTG	2 cut(s)	293, 629
RsaI	GTAC	4 cut(s)	251, 715, 927, 1369
RsaNI	GTAC	4 cut(s)	250, 714, 926, 1368
RseI	CAYNNNNRTG	1 cut(s)	1383
SacI	GAGCTC	1 cut(s)	1341
SalI	GTCGAC	1 cut(s)	1412
SaqAI	TTAA	5 cut(s)	515, 875, 1265, 1440, 1569
SatI	GCNGC	9 cut(s)	154, 165, 294, 766, 856, 969, 1029, 1227, 1250
Sau3AI	GATC	4 cut(s)	353, 481, 631, 660
Sau96I	GGNCC	4 cut(s)	114, 226, 887, 1269
ScaI	AGTACT	1 cut(s)	251
SchI	GAGTC	1 cut(s)	484
ScrFI	CCNGG	4 cut(s)	1343, 1475, 1485, 1529
SduI	GDGCHC	2 cut(s)	1341, 1536
SfaNI	GCATC	6 cut(s)	31, 296, 430, 1311, 1503, 1549
SfuI	TTCGAA	3 cut(s)	62, 912, 1298
SinI	GGWCC	3 cut(s)	114, 226, 1269
SmiMI	CAYNNNNRTG	1 cut(s)	1383
SmlI	CTYRAG	4 cut(s)	735, 891, 1253, 1447
SmoI	CTYRAG	4 cut(s)	735, 891, 1253, 1447
SphI	GCATGC	1 cut(s)	506
Sse9I	AATT	9 cut(s)	182, 328, 534, 582, 1071, 1122, 1278, 1420, 1539
SsiI	CCGC	5 cut(s)	138, 149, 158, 360, 920
SspMI	CTAG	5 cut(s)	161, 347, 462, 1083, 1259
SstI	GAGCTC	1 cut(s)	1341
StyD4I	CCNGG	4 cut(s)	1341, 1473, 1483, 1527
StyI	CCWWGG	1 cut(s)	1384
TaaI	ACNGT	6 cut(s)	667, 685, 1102, 1363, 1372, 1507
TaqI	TCGA	8 cut(s)	62, 96, 120, 311, 600, 912, 1298, 1413
TaqII	GACCGA	2 cut(s)	1076, 1259
TasI	AATT	9 cut(s)	182, 328, 534, 582, 1071, 1122, 1278, 1420, 1539
TatI	WGTACW	1 cut(s)	249
TfiI	GAWTC	6 cut(s)	458, 465, 747, 1003, 1136, 1478
Tru1I	TTAA	5 cut(s)	515, 875, 1265, 1440, 1569
Tru9I	TTAA	5 cut(s)	515, 875, 1265, 1440, 1569
TscAI	CASTG	6 cut(s)	151, 195, 724, 1171, 1194, 1510
TseFI	GTSAC	1 cut(s)	1189
TseI	GCWGC	9 cut(s)	153, 164, 293, 765, 855, 968, 1028, 1226, 1249
Tsp45I	GTSAC	1 cut(s)	1189
TspGWI	ACGGA	4 cut(s)	270, 483, 1129, 1355
TspRI	CASTG	6 cut(s)	151, 195, 724, 1171, 1194, 1510
VpaK11BI	GGWCC	3 cut(s)	114, 226, 1269
XapI	RAATTY	3 cut(s)	182, 534, 1539
XbaI	TCTAGA	1 cut(s)	461
XceI	RCATGY	2 cut(s)	506, 1233
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1385
XmiI	GTMKAC	3 cut(s)	687, 1374, 1413
XspI	CTAG	5 cut(s)	161, 347, 462, 1083, 1259
ZrmI	AGTACT	1 cut(s)	251
Zsp2I	ATGCAT	1 cut(s)	289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.