Rorug06G0087900
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
11722101 .. 11724877
2777 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0087900.1

Sequence Viewer

Length: 2043 bp
ATGGCCTCTCTCATGGCGATTCGACGCGCTCGAACCCCAGCACCACTCTCTTCCATCTTCAACAAGGTACGGCCTCTCCACCCTTCTCACTCATTTCACTGCAACACCCTCCAAACCCTAACCATTTCCAAAACCCTGAGCACCTTCGCCGTCCCAAACGAGTACCCAGGGCCTGCTCCACAGCAAACCCCACCCTCCGATCATAGAAATCTAAACCCTAATCAGTGGAGCCCACCAAACCAGGGTTACGGAAACCCTAACCAGTGGAATTCACAGACCCAGCACCATTATCAGGGTCAGAATCAGAGCTATCCACAACGTGGGAACTCTAATCAGTGGAATCCTCAGGCTCAGGGTCAGGGCTATCCTCAGCAGCAAAACCCTAATCCATTTCCTAACCAGAATCAGAGCTACCCACAGCGTGGGAGCCCTAATCAGTGGAGTCCTCAGCGTCAAAACCCTAACCCTAATTTTGAGCAGCCACCCAGAAGCCCAAATCAGTGGAATGATCAGAATCAGAATCGAGGGTACCCCCAATATGGAAACCCTAGCCAGGTGAACCCTCCAAATCCCAATTTTCAGCAACCCAGAAACCCAAATCAGTGGAACAATCAGAATCAGAACCGGGGATACCCCCAATCTGGATATCCTAATCAGGGGGCTCCTCAGGCTCAGAGCCCTAACCAGTGGAACAACAAGAATCAGGGGGTGAATGAAGCCGCCGCGGTTGTTGTGCCACCTTCGATTGATGATTTGAGGCGGTTATGTGAAGAGGGGAAGGTTAAAGAAGCTCTTCAGTTGATGGATGAAGAGGGGGTTAAGGCTGATGCTGATTGCTTTCATTATCTGTTTAAGTTGTGTGGGGATTCGAAGTCGTTTGAGAATGCAAAGAAAGTTCATGACTTCTTTTTGCAGTCTACATATAGGAGTAGTCGTGACTTGAGCCATAAAGTGATTGAAATGTATGGAAAGTGTGGAAGCATGACTGATGCACGGAGAGTGTTTGATCACCTGGTGGAGAAGAACATTGATTCCTGGCATTTGATGATCAACTGGTATGCGGATAATGGGTTAGGAGATGATGCGTTGCAGATGTTTGAGCTGATGAGGGAGCAAGGGTTGAAGCCCAATTCTGACACTTTCCTTGCAGTTTTTGCGGCTTGTGCTAGTGCAGATGCTGTGGAAGAAGCATTTTTACATTTCGATTCAATGAAACAGGAGTACGGATTTGATCCAGAAGTGGAGCATTATTTGGGGATTCTAGATGTGCTTGGAAAATGTGGTCATCTGCATGAAGCAGTTGATTATATTGAGAAACTCCCATTTGACCCTACAGTGCAAGTTTGGGAGGCATTGTGGAATTATGCTCGGATCCATGGAGATATTGATCTTGAAGATCATGCTGAGGAGTTAATGATTGCTCTTGATCCGTCAAAGGCTATTACTAATAAGATCCCAACTCCACCACCCAAAAAGCGTACTGCTATTAGCATGCTTGATGGGAAAAACAGAATCACTGAGTTCAAAAATCCCACATTGTACAAGGATGATGAAAAGTTAAAGGCTCTCAATTCGATGAGAGGAGGAGGTTATGTTCCAGACACAAGATATGTTCTTCATGACATTGACCAGGAGGCAAAGGAGCAAGCCTTGCTCTATCACAGTGAGCGTTTGGCAATCGCATATGGTCTGATTAGTACTCCGGCAAGGACACCGCTTAGGATCATCAAAAACCTTCGTGTTTGTGGTGACTGTCACAATGCCATTAAGATCATGTCTAAGATTGTTGGAAGGGAATTAATTGTTAGGGACAATAAACGTTTTCATCATTTCAAGGATGGAAAATGCTCTTGTGGGGATTATTGCTTTGGTGTGGGATATGGTCTAATTTGTTCGGCAAGTGTGGCATTCGTTGGTCGAGGCCTTTGTTCTTTGGTTGTGACACTCTCTACGCTAGCCATGTTAGAGAATGGAGTTTTGGTGCTAGTTCCTAATCATGTGGCTGTTGGTGTGGCTTGCTCTGCACCAGTGCTTATTCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

680

Amino Acids

76.62

Weight (kDa)

6.9

Isoelectric Point (pI)

45.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 342 - 389 9.1e-09 PPR repeat family
DYW_deaminase PF14432 530 - 621 3.8e-43 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014921)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G34110 AT1G34110
fragaria_vesca FvH4_2g13450
malus_domestica MD05G1035300.v1.1 MD10G1037600.v1.1
prunus_persica Prupe.8G043000_v2.0.a1
pyrus_communis pycom05g02560
rosa_chinensis RchiOBHm_Chr6g0275071
rosa_laevigata RLG00000013500
rosa_multiflora Rmu_sc0000447.1_g000012
rosa_roxburghii Rroxscaffold_7G00193690
rosa_rugosa Rorug06G0087900
rosa_samantha Rh6AG202200 Rh6BG205600 Rh6CG207500 Rh6DG197400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 528
AccB1I GGYRCC 1 cut(s) 528
AccB7I CCANNNNNTGG 2 cut(s) 320, 422
AccI GTMKAC 1 cut(s) 917
AccII CGCG 2 cut(s) 27, 725
AciI CCGC 7 cut(s) 720, 723, 725, 760, 1061, 1157, 1715
AclI AACGTT 1 cut(s) 1819
AclWI GGATC 6 cut(s) 1226, 1366, 1379, 1421, 1447, 1730
AcsI RAATTY 1 cut(s) 268
AcuI CTGAAG 1 cut(s) 779
AdeI CACNNNGTG 3 cut(s) 320, 422, 1015
AfaI GTAC 7 cut(s) 69, 164, 530, 1223, 1480, 1541, 1699
AfiI CCNNNNNNNGG 8 cut(s) 242, 292, 320, 422, 539, 553, 641, 656
AgsI TTSAA 7 cut(s) 61, 959, 1123, 1209, 1394, 1525, 1834
AjnI CCWGG 6 cut(s) 166, 240, 552, 1011, 1034, 1629
AjuI GAANNNNNNNTTGG 2 cut(s) 1961, 1993
AloI GAACNNNNNNTCC 4 cut(s) 1016, 1048, 1578, 1610
AluBI AGCT 4 cut(s) 309, 411, 791, 1102
AluI AGCT 4 cut(s) 309, 411, 791, 1102
Alw21I GWGCWC 1 cut(s) 143
AlwI GGATC 6 cut(s) 1226, 1366, 1379, 1421, 1447, 1730
AlwNI CAGNNNCTG 2 cut(s) 173, 1178
AoxI GGCC 4 cut(s) 3, 71, 170, 1921
ApeKI GCWGC 2 cut(s) 373, 478
ApoI RAATTY 1 cut(s) 268
AseI ATTAAT 1 cut(s) 1799
Asp700I GAANNNNTTC 1 cut(s) 792
Asp718I GGTACC 1 cut(s) 528
AspLEI GCGC 1 cut(s) 29
AspS9I GGNCC 1 cut(s) 170
AsuC2I CCSGG 1 cut(s) 626
AsuHPI GGTGA 4 cut(s) 568, 721, 1001, 1760
AsuII TTCGAA 1 cut(s) 869
AsuNHI GCTAGC 1 cut(s) 1954
AxyI CCTNAGG 2 cut(s) 345, 666
BamHI GGATCC 1 cut(s) 1371
BanI GGYRCC 1 cut(s) 528
BanII GRGCYC 4 cut(s) 233, 431, 664, 680
BarI GAAGNNNNNNTAC 2 cut(s) 1179, 1211
Bbv12I GWGCWC 1 cut(s) 143
BbvCI CCTCAGC 3 cut(s) 369, 447, 1404
BbvI GCAGC 2 cut(s) 385, 490
BccI CCATC 4 cut(s) 62, 796, 1493, 1832
BceAI ACGGC 2 cut(s) 86, 134
BciT130I CCWGG 6 cut(s) 168, 242, 554, 1013, 1036, 1631
BciVI GTATCC 1 cut(s) 623
BclI TGATCA 3 cut(s) 508, 1006, 1047
BcnI CCSGG 1 cut(s) 626
BfaI CTAG 5 cut(s) 549, 1167, 1262, 1955, 1985
BfmI CTRYAG 1 cut(s) 1332
BfuI GTATCC 1 cut(s) 623
BisI GCNGC 5 cut(s) 374, 479, 720, 723, 1158
BlsI GCNGC 5 cut(s) 375, 480, 721, 724, 1159
BmcAI AGTACT 1 cut(s) 1699
Bme1390I CCNGG 7 cut(s) 168, 242, 554, 626, 1013, 1036, 1631
BmgT120I GGNCC 1 cut(s) 170
BmiI GGNNCC 5 cut(s) 230, 428, 530, 663, 1373
BmrFI CCNGG 7 cut(s) 168, 242, 554, 626, 1013, 1036, 1631
BmsI GCATC 4 cut(s) 817, 979, 1072, 1165
BmtI GCTAGC 1 cut(s) 1958
Bpu10I CCTNAGC 6 cut(s) 137, 351, 369, 447, 1404, 1718
Bpu14I TTCGAA 1 cut(s) 869
BpuEI CTTGAG 1 cut(s) 961
BpuMI CCSGG 1 cut(s) 626
BsaBI GATNNNNATC 2 cut(s) 513, 1386
BsaJI CCNNGG 6 cut(s) 166, 167, 241, 625, 723, 1375
Bsc4I CCNNNNNNNGG 8 cut(s) 242, 292, 320, 422, 539, 553, 641, 656
Bse1I ACTGG 4 cut(s) 262, 685, 1058, 2027
Bse21I CCTNAGG 2 cut(s) 345, 666
Bse8I GATNNNNATC 2 cut(s) 513, 1386
BseBI CCWGG 6 cut(s) 168, 242, 554, 1013, 1036, 1631
BseDI CCNNGG 6 cut(s) 166, 167, 241, 625, 723, 1375
BseGI GGATG 3 cut(s) 811, 1552, 1843
BseJI GATNNNNATC 2 cut(s) 513, 1386
BseLI CCNNNNNNNGG 8 cut(s) 242, 292, 320, 422, 539, 553, 641, 656
BseMII CTCAG 9 cut(s) 128, 359, 365, 383, 461, 680, 686, 1395, 1509
BseNI ACTGG 4 cut(s) 262, 685, 1058, 2027
BseRI GAGGAG 4 cut(s) 654, 1421, 1596, 1599
BseXI GCAGC 2 cut(s) 385, 490
BseYI CCCAGC 2 cut(s) 37, 279
BsgI GTGCAG 2 cut(s) 1191, 2007
Bsh1236I CGCG 2 cut(s) 27, 725
BshFI GGCC 4 cut(s) 5, 73, 172, 1923
BshNI GGYRCC 1 cut(s) 528
BsiHKAI GWGCWC 1 cut(s) 143
BsiSI CCGG 2 cut(s) 625, 1703
BslFI GGGAC 2 cut(s) 137, 1823
BslI CCNNNNNNNGG 8 cut(s) 242, 292, 320, 422, 539, 553, 641, 656
BsmFI GGGAC 2 cut(s) 137, 1823
BsmI GAATGC 2 cut(s) 889, 1907
BsnI GGCC 4 cut(s) 5, 73, 172, 1923
Bsp119I TTCGAA 1 cut(s) 869
Bsp1286I GDGCHC 5 cut(s) 143, 233, 431, 664, 680
Bsp1407I TGTACA 1 cut(s) 1539
Bsp19I CCATGG 1 cut(s) 1375
BspACI CCGC 7 cut(s) 720, 723, 725, 760, 1061, 1157, 1715
BspANI GGCC 4 cut(s) 5, 73, 172, 1923
BspCNI CTCAG 9 cut(s) 129, 358, 364, 382, 460, 679, 685, 1396, 1510
BspFNI CGCG 2 cut(s) 27, 725
BspHI TCATGA 2 cut(s) 898, 1618
BspLI GGNNCC 5 cut(s) 230, 428, 530, 663, 1373
BspOI GCTAGC 1 cut(s) 1958
BspPI GGATC 6 cut(s) 1226, 1366, 1379, 1421, 1447, 1730
BspQI GCTCTTC 1 cut(s) 798
BspT104I TTCGAA 1 cut(s) 869
BspT107I GGYRCC 1 cut(s) 528
BsrGI TGTACA 1 cut(s) 1539
BsrI ACTGG 4 cut(s) 262, 685, 1058, 2027
BssECI CCNNGG 6 cut(s) 166, 167, 241, 625, 723, 1375
BssT1I CCWWGG 1 cut(s) 1375
Bst2UI CCWGG 6 cut(s) 168, 242, 554, 1013, 1036, 1631
Bst4CI ACNGT 3 cut(s) 1336, 1664, 1754
Bst6I CTCTTC 4 cut(s) 55, 765, 798, 804
BstAPI GCANNNNNTGC 2 cut(s) 1154, 1651
BstAUI TGTACA 1 cut(s) 1539
BstBI TTCGAA 1 cut(s) 869
BstC8I GCNNGC 5 cut(s) 174, 1493, 1647, 1956, 2017
BstDSI CCRYGG 2 cut(s) 723, 1375
BstF5I GGATG 3 cut(s) 811, 1552, 1843
BstFNI CGCG 2 cut(s) 27, 725
BstHHI GCGC 1 cut(s) 29
BstMWI GCNNNNNNNGC 6 cut(s) 668, 1154, 1163, 1651, 1904, 2021
BstNI CCWGG 6 cut(s) 168, 242, 554, 1013, 1036, 1631
BstNSI RCATGY 1 cut(s) 1495
BstSCI CCNGG 7 cut(s) 166, 240, 552, 624, 1011, 1034, 1629
BstSFI CTRYAG 1 cut(s) 1332
BstUI CGCG 2 cut(s) 27, 725
BstV1I GCAGC 2 cut(s) 385, 490
BstX2I RGATCY 2 cut(s) 1371, 1452
BstXI CCANNNNNNTGG 2 cut(s) 501, 603
BstYI RGATCY 2 cut(s) 1371, 1452
Bsu36I CCTNAGG 2 cut(s) 345, 666
BsuI GTATCC 1 cut(s) 623
BsuRI GGCC 4 cut(s) 5, 73, 172, 1923
BtgI CCRYGG 2 cut(s) 723, 1375
BtsCI GGATG 3 cut(s) 811, 1552, 1843
BtsI GCAGTG 1 cut(s) 97
Cac8I GCNNGC 5 cut(s) 174, 1493, 1647, 1956, 2017
CaiI CAGNNNCTG 2 cut(s) 173, 1178
CciI TCATGA 2 cut(s) 898, 1618
CfoI GCGC 1 cut(s) 29
Cfr13I GGNCC 1 cut(s) 170
Cfr42I CCGCGG 1 cut(s) 726
CseI GACGC 2 cut(s) 33, 440
CsiI ACCWGGT 1 cut(s) 1011
Csp6I GTAC 7 cut(s) 68, 163, 529, 1222, 1479, 1540, 1698
CviQI GTAC 7 cut(s) 68, 163, 529, 1222, 1479, 1540, 1698
DraIII CACNNNGTG 3 cut(s) 320, 422, 1015
Eam1104I CTCTTC 4 cut(s) 55, 765, 798, 804
EarI CTCTTC 4 cut(s) 55, 765, 798, 804
Eco130I CCWWGG 1 cut(s) 1375
Eco147I AGGCCT 1 cut(s) 1923
Eco24I GRGCYC 4 cut(s) 233, 431, 664, 680
Eco32I GATATC 1 cut(s) 647
Eco57I CTGAAG 1 cut(s) 779
Eco81I CCTNAGG 2 cut(s) 345, 666
EcoO109I RGGNCCY 1 cut(s) 170
EcoRI GAATTC 1 cut(s) 268
EcoRII CCWGG 6 cut(s) 166, 240, 552, 1011, 1034, 1629
EcoRV GATATC 1 cut(s) 647
EcoT14I CCWWGG 1 cut(s) 1375
EcoT38I GRGCYC 4 cut(s) 233, 431, 664, 680
ErhI CCWWGG 1 cut(s) 1375
FalI AAGNNNNNCTT 2 cut(s) 777, 809
FaqI GGGAC 2 cut(s) 137, 1823
FauNDI CATATG 1 cut(s) 1684
FbaI TGATCA 3 cut(s) 508, 1006, 1047
FblI GTMKAC 1 cut(s) 917
Fnu4HI GCNGC 5 cut(s) 374, 479, 720, 723, 1158
FokI GGATG 3 cut(s) 818, 1559, 1850
FriOI GRGCYC 4 cut(s) 233, 431, 664, 680
Fsp4HI GCNGC 5 cut(s) 374, 479, 720, 723, 1158
FspBI CTAG 5 cut(s) 549, 1167, 1262, 1955, 1985
GlaI GCGC 1 cut(s) 28
GluI GCNGC 5 cut(s) 374, 479, 720, 723, 1158
GsaI CCCAGC 2 cut(s) 41, 283
HaeIII GGCC 4 cut(s) 5, 73, 172, 1923
HapII CCGG 2 cut(s) 625, 1703
HgaI GACGC 2 cut(s) 33, 440
HhaI GCGC 1 cut(s) 29
Hin6I GCGC 1 cut(s) 27
HinP1I GCGC 1 cut(s) 27
HpaII CCGG 2 cut(s) 625, 1703
HphI GGTGA 4 cut(s) 568, 721, 1001, 1760
Hpy166II GTNNAC 2 cut(s) 559, 918
Hpy188III TCNNGA 9 cut(s) 642, 899, 935, 1235, 1262, 1391, 1424, 1598, 1619
Hpy8I GTNNAC 2 cut(s) 559, 918
Hpy99I CGWCG 1 cut(s) 27
HpyAV CCTTC 6 cut(s) 93, 154, 750, 772, 1745, 1785
HpyCH4III ACNGT 3 cut(s) 1336, 1664, 1754
HpyCH4IV ACGT 2 cut(s) 319, 1819
HpyF10VI GCNNNNNNNGC 6 cut(s) 668, 1154, 1163, 1651, 1904, 2021
HpySE526I ACGT 2 cut(s) 319, 1819
HspAI GCGC 1 cut(s) 27
KpnI GGTACC 1 cut(s) 532
Ksp22I TGATCA 3 cut(s) 508, 1006, 1047
KspI CCGCGG 1 cut(s) 726
LguI GCTCTTC 1 cut(s) 798
LmnI GCTCC 7 cut(s) 181, 228, 426, 667, 1111, 1243, 1642
Lsp1109I GCAGC 2 cut(s) 385, 490
LweI GCATC 4 cut(s) 817, 979, 1072, 1165
MabI ACCWGGT 1 cut(s) 1011
MaeI CTAG 5 cut(s) 549, 1167, 1262, 1955, 1985
MaeII ACGT 2 cut(s) 319, 1819
MaeIII GTNAC 5 cut(s) 245, 935, 1748, 1754, 1939
MboII GAAGA 9 cut(s) 42, 49, 782, 785, 821, 1033, 1196, 1406, 1607
MflI RGATCY 2 cut(s) 1371, 1452
MhlI GDGCHC 5 cut(s) 143, 233, 431, 664, 680
MluCI AATT 9 cut(s) 268, 469, 574, 1129, 1360, 1570, 1796, 1800, 1887
MlyI GAGTC 1 cut(s) 451
MmeI TCCRAC 1 cut(s) 1768
MroXI GAANNNNTTC 1 cut(s) 792
MseI TTAA 7 cut(s) 783, 819, 852, 1412, 1559, 1767, 1799
MslI CAYNNNNRTG 1 cut(s) 1290
MspA1I CMGCKG 1 cut(s) 725
MspI CCGG 2 cut(s) 625, 1703
MspR9I CCNGG 7 cut(s) 168, 242, 554, 626, 1013, 1036, 1631
Mva1269I GAATGC 2 cut(s) 889, 1907
MvaI CCWGG 6 cut(s) 168, 242, 554, 1013, 1036, 1631
MvnI CGCG 2 cut(s) 27, 725
MwoI GCNNNNNNNGC 6 cut(s) 668, 1154, 1163, 1651, 1904, 2021
NciI CCSGG 1 cut(s) 626
NcoI CCATGG 1 cut(s) 1375
NdeI CATATG 1 cut(s) 1684
NheI GCTAGC 1 cut(s) 1954
NlaIV GGNNCC 5 cut(s) 230, 428, 530, 663, 1373
NmuCI GTSAC 4 cut(s) 935, 1748, 1754, 1939
NspI RCATGY 1 cut(s) 1495
NspV TTCGAA 1 cut(s) 869
PaeI GCATGC 1 cut(s) 1495
PagI TCATGA 2 cut(s) 898, 1618
PasI CCCWGGG 1 cut(s) 167
PceI AGGCCT 1 cut(s) 1923
PciSI GCTCTTC 1 cut(s) 798
PcsI WCGNNNNNNNCGW 1 cut(s) 28
PctI GAATGC 2 cut(s) 889, 1907
PdmI GAANNNNTTC 1 cut(s) 792
PflMI CCANNNNNTGG 2 cut(s) 320, 422
PkrI GCNGC 5 cut(s) 375, 480, 721, 724, 1159
PleI GAGTC 1 cut(s) 450
PpsI GAGTC 1 cut(s) 450
PshBI ATTAAT 1 cut(s) 1799
Psp1406I AACGTT 1 cut(s) 1819
Psp6I CCWGG 6 cut(s) 166, 240, 552, 1011, 1034, 1629
PspFI CCCAGC 2 cut(s) 37, 279
PspGI CCWGG 6 cut(s) 166, 240, 552, 1011, 1034, 1629
PspN4I GGNNCC 5 cut(s) 230, 428, 530, 663, 1373
PspPI GGNCC 1 cut(s) 170
PsrI GAACNNNNNNTAC 2 cut(s) 614, 646
PstNI CAGNNNCTG 2 cut(s) 173, 1178
PsuI RGATCY 2 cut(s) 1371, 1452
RsaI GTAC 7 cut(s) 69, 164, 530, 1223, 1480, 1541, 1699
RsaNI GTAC 7 cut(s) 68, 163, 529, 1222, 1479, 1540, 1698
RseI CAYNNNNRTG 1 cut(s) 1290
SacII CCGCGG 1 cut(s) 726
SapI GCTCTTC 1 cut(s) 798
SaqAI TTAA 7 cut(s) 783, 819, 852, 1412, 1559, 1767, 1799
SatI GCNGC 5 cut(s) 374, 479, 720, 723, 1158
Sau96I GGNCC 1 cut(s) 170
ScaI AGTACT 1 cut(s) 1699
SchI GAGTC 1 cut(s) 451
ScrFI CCNGG 7 cut(s) 168, 242, 554, 626, 1013, 1036, 1631
SduI GDGCHC 5 cut(s) 143, 233, 431, 664, 680
SexAI ACCWGGT 1 cut(s) 1011
SfaNI GCATC 4 cut(s) 817, 979, 1072, 1165
SfcI CTRYAG 1 cut(s) 1332
Sfr303I CCGCGG 1 cut(s) 726
SfuI TTCGAA 1 cut(s) 869
SgrBI CCGCGG 1 cut(s) 726
SmiMI CAYNNNNRTG 1 cut(s) 1290
SmlI CTYRAG 1 cut(s) 940
SmoI CTYRAG 1 cut(s) 940
SphI GCATGC 1 cut(s) 1495
Sse9I AATT 9 cut(s) 268, 469, 574, 1129, 1360, 1570, 1796, 1800, 1887
SseBI AGGCCT 1 cut(s) 1923
SsiI CCGC 7 cut(s) 720, 723, 725, 760, 1061, 1157, 1715
SspMI CTAG 5 cut(s) 549, 1167, 1262, 1955, 1985
StuI AGGCCT 1 cut(s) 1923
StyD4I CCNGG 7 cut(s) 166, 240, 552, 624, 1011, 1034, 1629
StyI CCWWGG 1 cut(s) 1375
TaaI ACNGT 3 cut(s) 1336, 1664, 1754
TaiI ACGT 2 cut(s) 322, 1822
TaqI TCGA 8 cut(s) 22, 31, 523, 743, 869, 1203, 1574, 1918
TasI AATT 9 cut(s) 268, 469, 574, 1129, 1360, 1570, 1796, 1800, 1887
TatI WGTACW 2 cut(s) 1539, 1697
TauI GCSGC 3 cut(s) 722, 725, 1160
Tru1I TTAA 7 cut(s) 783, 819, 852, 1412, 1559, 1767, 1799
Tru9I TTAA 7 cut(s) 783, 819, 852, 1412, 1559, 1767, 1799
TseFI GTSAC 4 cut(s) 935, 1748, 1754, 1939
TseI GCWGC 2 cut(s) 373, 478
Tsp45I GTSAC 4 cut(s) 935, 1748, 1754, 1939
TspDTI ATGAA 9 cut(s) 729, 822, 830, 887, 1226, 1308, 1566, 1607, 1814
TspGWI ACGGA 4 cut(s) 264, 1009, 1239, 1419
Van91I CCANNNNNTGG 2 cut(s) 320, 422
VspI ATTAAT 1 cut(s) 1799
XapI RAATTY 1 cut(s) 268
XbaI TCTAGA 1 cut(s) 1261
XceI RCATGY 1 cut(s) 1495
XmiI GTMKAC 1 cut(s) 917
XmnI GAANNNNTTC 1 cut(s) 792
XspI CTAG 5 cut(s) 549, 1167, 1262, 1955, 1985
ZrmI AGTACT 1 cut(s) 1699
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.