Rorug06G0093600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0013073
Physical Location & Seq
Reverse (-)
12452642 .. 12455492
2851 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0093600.1

Sequence Viewer

Length: 1383 bp
ATGGCCGCCGCCGGCGATCACTCCGACGTCGAACACGTCTTCCGCTTCTTCCGCGTCCACAAAGACGGCACCATCCACCGAACCCATCCCTCCTTCGACAAAATCCCAGCCGTCGACGACCTCACCACCGGCGTCCGATCCAAAGACGTCACCATCTCCACCGACCCACCAGTCTCAGCCCGCATCTTCGTCCCCAAATCCGCCGACCCGGCCCGAAAGCTCCCCCTCCTCTTCTACGTCCACGGCGGCGGCTTCTGCATGCAGTCCGCCTTCTCCTCCACCTACCACGGCTACGTCTCCACCATCTGCTCTTCCGCCGACGTCATTGCCGTCTCGGTCGAGTACGGACTCTTCCCGACCCGGCCCATACCCGCTTGCTACGAGGACTCCTGGGCCGCTCTCCAATGGGTCGCGGCTCACGCTAACGGAACCGGGTCGGATCAATGGCTGAACGAGTACGCCGACTTGAACCGCGTGTTCATCGCCGGGGACAGCGCGGGAGGGAACATAACACACACTCTGGTGTCCCTGGTCGGGTCGGTCGGGTTACCCGGAGTGAAAGTGGTTGGGGCGATTCTGGCGCATCCCTACTTCGGCGGGACCGACGATGATAAGATGTGGCTGTATATAAACAAGGAGAATGAAGGGTTGCAGGATAGGAGGTTGAAGCCGGCCGCGGAGGATCTGGGGCGGCTCGGGTGTGAGAAGGTGTTGGTGTTTGTGGCGGAGAAGGACCATTTGAACAGAGTGGGGAGGAGCTACGTGGAGGAGCTGAAGAAGAGTGGGTGGAAAGGGAGTGTGGAGATGAAGGAGAATAAAGGGAAGGACCATTGCTTTCATTTGCGAGAAACCAAGGATGAACAGGCTGTGGATTTGTTGAAGACAAATGCCAATCGCTTCTCCATGGCAAGCAAGGTAAGTTGCTCGAGGGACTGTGGGATCTTGGCCGAGGCATTATTATCAAAGTCTCTCCGGAGCAAACCTACCTCCAACCTAGTTGAAACCAGCGAAGCAAGGATAACGCCCTCGCAACCCAGTGAAGCAAGGATAACGCCCTCGCAACCCAGCGAACCTAAAAGATCACACCACAAGTCCTTACCTGTAAGGCAAAAGTCCTTTTCAGAAAGGCATAGAAAAGAACCTGGTGACGAGGTTGGTGCTCTCCTCGTCCACAGTGTTTGGTTAAGAAGTCAGGTCAATGGACGCCCCCACAACTACACCGCACTGTGTTGGCACGCTCACGCAACTCAAATTGCTAACCAGACTGGTTTCCGAGCCAAACAACACCCATTCTTTGGTGGGTCGAAGAAGGATGACAAAATGTGGTTGTACATGTGTCCGGACAATGGCGGGGTGCAGGATAGGAGGCTGAACCGCCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

460

Amino Acids

50.94

Weight (kDa)

8.81

Isoelectric Point (pI)

44.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BD-FAE PF20434 62 - 171 3.6e-10 BD-FAE
COesterase PF00135 62 - 176 7.7e-09 Carboxylesterase family
Abhydrolase_3 PF07859 77 - 280 3.7e-38 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013073)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17300 AT4G35320
fragaria_vesca FvH4_2g16910
malus_domestica MD05G1140900.v1.1 MD11G1242200.v1.1
pyrus_communis pycom05g13600 pycom10g12220
rosa_chinensis RchiOBHm_Chr6g0281051
rosa_laevigata RLG00000013001
rosa_multiflora Rmu_sc0012869.1_g000008
rosa_roxburghii Rroxscaffold_7G00187350
rosa_rugosa Rorug06G0093600 Rorug06G0138300
rosa_samantha Rh6BG253400 Rh6CG253300 Rh6DG244900
rosa_wichuraiana Rw6G021740 Rw7G017000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 170
AatII GACGTC 3 cut(s) 30, 150, 324
AccB1I GGYRCC 1 cut(s) 68
AccB7I CCANNNNNTGG 1 cut(s) 1295
AccBSI CCGCTC 1 cut(s) 398
AccI GTMKAC 1 cut(s) 114
AccII CGCG 5 cut(s) 54, 413, 474, 497, 677
AccIII TCCGGA 2 cut(s) 972, 1339
AclWI GGATC 4 cut(s) 132, 447, 690, 947
AcoI YGGCCR 3 cut(s) 3, 672, 945
AcuI CTGAAG 1 cut(s) 794
AcyI GRCGYC 5 cut(s) 27, 132, 147, 321, 1204
AfaI GTAC 3 cut(s) 344, 458, 1331
AfiI CCNNNNNNNGG 4 cut(s) 534, 593, 1295, 1346
AflIII ACRYGT 2 cut(s) 34, 1332
AgsI TTSAA 5 cut(s) 469, 667, 742, 880, 1001
AjiI CACGTC 1 cut(s) 37
AjnI CCWGG 3 cut(s) 389, 528, 1141
AleI CACNNNNGTG 1 cut(s) 521
AloI GAACNNNNNNTCC 2 cut(s) 24, 56
AluBI AGCT 3 cut(s) 220, 759, 772
AluI AGCT 3 cut(s) 220, 759, 772
Alw21I GWGCWC 1 cut(s) 1162
Alw26I GTCTC 4 cut(s) 178, 301, 337, 972
AlwI GGATC 4 cut(s) 132, 447, 690, 947
Ama87I CYCGRG 2 cut(s) 695, 925
Aor13HI TCCGGA 2 cut(s) 972, 1339
AoxI GGCC 6 cut(s) 3, 210, 362, 393, 672, 945
AspLEI GCGC 2 cut(s) 497, 583
AspS9I GGNCC 6 cut(s) 211, 363, 393, 600, 733, 826
AsuC2I CCSGG 5 cut(s) 209, 361, 433, 487, 552
AsuHPI GGTGA 3 cut(s) 115, 142, 1157
AvaI CYCGRG 2 cut(s) 695, 925
AvaII GGWCC 3 cut(s) 600, 733, 826
BanI GGYRCC 1 cut(s) 68
BarI GAAGNNNNNNTAC 2 cut(s) 335, 367
BbsI GAAGAC 2 cut(s) 31, 887
Bbv12I GWGCWC 1 cut(s) 1162
BccI CCATC 4 cut(s) 80, 93, 161, 311
BceAI ACGGC 5 cut(s) 82, 95, 259, 304, 314
BcgI CGANNNNNNTGC 4 cut(s) 308, 342, 1139, 1173
BciT130I CCWGG 3 cut(s) 391, 530, 1143
BcnI CCSGG 5 cut(s) 209, 361, 433, 487, 552
BcoDI GTCTC 4 cut(s) 178, 301, 337, 972
BfaI CTAG 2 cut(s) 995, 1381
BglI GCCNNNNNGGC 1 cut(s) 209
BisI GCNGC 8 cut(s) 6, 9, 247, 250, 396, 414, 675, 692
BlsI GCNGC 8 cut(s) 7, 10, 248, 251, 397, 415, 676, 693
Bme1390I CCNGG 8 cut(s) 209, 361, 391, 433, 487, 530, 552, 1143
Bme18I GGWCC 3 cut(s) 600, 733, 826
BmeT110I CYCGRG 2 cut(s) 695, 925
BmgBI CACGTC 1 cut(s) 37
BmgT120I GGNCC 6 cut(s) 211, 363, 393, 600, 733, 826
BmiI GGNNCC 3 cut(s) 70, 430, 601
BmrFI CCNGG 8 cut(s) 209, 361, 391, 433, 487, 530, 552, 1143
BmrI ACTGGG 1 cut(s) 1029
BmsI GCATC 2 cut(s) 192, 592
BmuI ACTGGG 1 cut(s) 1029
BpiI GAAGAC 2 cut(s) 31, 887
BpuMI CCSGG 5 cut(s) 209, 361, 433, 487, 552
BsaAI YACGTR 1 cut(s) 763
BsaHI GRCGYC 5 cut(s) 27, 132, 147, 321, 1204
BsaJI CCNNGG 9 cut(s) 241, 286, 390, 486, 528, 675, 852, 903, 948
BsaWI WCCGGW 2 cut(s) 972, 1339
BsaXI ACNNNNNCTCC 4 cut(s) 371, 401, 546, 576
Bsc4I CCNNNNNNNGG 4 cut(s) 534, 593, 1295, 1346
Bse118I RCCGGY 3 cut(s) 11, 128, 670
Bse1I ACTGG 3 cut(s) 170, 1035, 1270
Bse3DI GCAATG 2 cut(s) 324, 829
BseAI TCCGGA 2 cut(s) 972, 1339
BseBI CCWGG 3 cut(s) 391, 530, 1143
BseDI CCNNGG 9 cut(s) 241, 286, 390, 486, 528, 675, 852, 903, 948
BseGI GGATG 5 cut(s) 72, 85, 583, 862, 1318
BseLI CCNNNNNNNGG 4 cut(s) 534, 593, 1295, 1346
BseMI GCAATG 2 cut(s) 324, 829
BseMII CTCAG 1 cut(s) 189
BseNI ACTGG 3 cut(s) 170, 1035, 1270
BseRI GAGGAG 5 cut(s) 218, 265, 769, 782, 1154
BseX3I CGGCCG 1 cut(s) 672
BseYI CCCAGC 2 cut(s) 106, 1064
BsgI GTGCAG 1 cut(s) 1376
Bsh1236I CGCG 5 cut(s) 54, 413, 474, 497, 677
Bsh1285I CGRYCG 3 cut(s) 339, 543, 675
BshFI GGCC 6 cut(s) 5, 212, 364, 395, 674, 947
BshNI GGYRCC 1 cut(s) 68
BsiEI CGRYCG 3 cut(s) 339, 543, 675
BsiHKAI GWGCWC 1 cut(s) 1162
BsiHKCI CYCGRG 2 cut(s) 695, 925
BslFI GGGAC 5 cut(s) 176, 503, 511, 613, 944
BslI CCNNNNNNNGG 4 cut(s) 534, 593, 1295, 1346
BsmAI GTCTC 4 cut(s) 178, 301, 337, 972
BsmBI CGTCTC 2 cut(s) 301, 337
BsmFI GGGAC 5 cut(s) 176, 503, 511, 613, 944
BsnI GGCC 6 cut(s) 5, 212, 364, 395, 674, 947
BsoBI CYCGRG 2 cut(s) 695, 925
Bsp1286I GDGCHC 1 cut(s) 1162
Bsp13I TCCGGA 2 cut(s) 972, 1339
Bsp1407I TGTACA 1 cut(s) 1329
Bsp143I GATC 6 cut(s) 16, 137, 439, 682, 939, 1079
Bsp19I CCATGG 1 cut(s) 903
BspANI GGCC 6 cut(s) 5, 212, 364, 395, 674, 947
BspCNI CTCAG 1 cut(s) 188
BspEI TCCGGA 2 cut(s) 972, 1339
BspFNI CGCG 5 cut(s) 54, 413, 474, 497, 677
BspLI GGNNCC 3 cut(s) 70, 430, 601
BspPI GGATC 4 cut(s) 132, 447, 690, 947
BspQI GCTCTTC 1 cut(s) 316
BspT107I GGYRCC 1 cut(s) 68
BsrBI CCGCTC 1 cut(s) 398
BsrDI GCAATG 2 cut(s) 324, 829
BsrFI RCCGGY 3 cut(s) 11, 128, 670
BsrGI TGTACA 1 cut(s) 1329
BsrI ACTGG 3 cut(s) 170, 1035, 1270
BssAI RCCGGY 3 cut(s) 11, 128, 670
BssECI CCNNGG 9 cut(s) 241, 286, 390, 486, 528, 675, 852, 903, 948
BssMI GATC 6 cut(s) 16, 137, 439, 682, 939, 1079
BssNI GRCGYC 5 cut(s) 27, 132, 147, 321, 1204
BssT1I CCWWGG 2 cut(s) 852, 903
Bst2UI CCWGG 3 cut(s) 391, 530, 1143
Bst4CI ACNGT 3 cut(s) 935, 1175, 1227
Bst6I CTCTTC 4 cut(s) 236, 316, 356, 773
BstACI GRCGYC 5 cut(s) 27, 132, 147, 321, 1204
BstAUI TGTACA 1 cut(s) 1329
BstBAI YACGTR 1 cut(s) 763
BstC8I GCNNGC 7 cut(s) 13, 181, 260, 376, 672, 910, 1236
BstDEI CTNAG 1 cut(s) 175
BstDSI CCRYGG 4 cut(s) 241, 286, 675, 903
BstEII GGTNACC 1 cut(s) 546
BstF5I GGATG 5 cut(s) 72, 85, 583, 862, 1318
BstFNI CGCG 5 cut(s) 54, 413, 474, 497, 677
BstHHI GCGC 2 cut(s) 497, 583
BstKTI GATC 6 cut(s) 19, 140, 442, 685, 942, 1082
BstMAI GTCTC 4 cut(s) 178, 301, 337, 972
BstMBI GATC 6 cut(s) 16, 137, 439, 682, 939, 1079
BstMCI CGRYCG 3 cut(s) 339, 543, 675
BstMWI GCNNNNNNNGC 5 cut(s) 51, 209, 255, 419, 578
BstNI CCWGG 3 cut(s) 391, 530, 1143
BstNSI RCATGY 2 cut(s) 262, 1336
BstPI GGTNACC 1 cut(s) 546
BstSCI CCNGG 8 cut(s) 207, 359, 389, 431, 485, 528, 550, 1141
BstUI CGCG 5 cut(s) 54, 413, 474, 497, 677
BstV2I GAAGAC 2 cut(s) 31, 887
BstX2I RGATCY 2 cut(s) 682, 939
BstYI RGATCY 2 cut(s) 682, 939
BstZI CGGCCG 1 cut(s) 672
BsuRI GGCC 6 cut(s) 5, 212, 364, 395, 674, 947
BtgI CCRYGG 4 cut(s) 241, 286, 675, 903
BtgZI GCGATG 1 cut(s) 466
BtrI CACGTC 1 cut(s) 37
BtsCI GGATG 5 cut(s) 72, 85, 583, 862, 1318
BtsIMutI CAGTG 3 cut(s) 1042, 1180, 1223
Cac8I GCNNGC 7 cut(s) 13, 181, 260, 376, 672, 910, 1236
CfoI GCGC 2 cut(s) 497, 583
Cfr10I RCCGGY 3 cut(s) 11, 128, 670
Cfr13I GGNCC 6 cut(s) 211, 363, 393, 600, 733, 826
Cfr42I CCGCGG 1 cut(s) 678
CseI GACGC 3 cut(s) 43, 121, 1212
CsiI ACCWGGT 1 cut(s) 1141
Csp6I GTAC 3 cut(s) 343, 457, 1330
CspCI CAANNNNNGTGG 2 cut(s) 1160, 1195
CviAII CATG 3 cut(s) 259, 904, 1333
CviQI GTAC 3 cut(s) 343, 457, 1330
DdeI CTNAG 1 cut(s) 175
DpnI GATC 6 cut(s) 18, 139, 441, 684, 941, 1081
DpnII GATC 6 cut(s) 16, 137, 439, 682, 939, 1079
DrdI GACNNNNNNGTC 1 cut(s) 170
DseDI GACNNNNNNGTC 1 cut(s) 170
EaeI YGGCCR 3 cut(s) 3, 672, 945
EagI CGGCCG 1 cut(s) 672
Eam1104I CTCTTC 4 cut(s) 236, 316, 356, 773
EarI CTCTTC 4 cut(s) 236, 316, 356, 773
EciI GGCGGA 4 cut(s) 190, 256, 304, 740
EclXI CGGCCG 1 cut(s) 672
Eco130I CCWWGG 2 cut(s) 852, 903
Eco47I GGWCC 3 cut(s) 600, 733, 826
Eco52I CGGCCG 1 cut(s) 672
Eco57I CTGAAG 1 cut(s) 794
Eco88I CYCGRG 2 cut(s) 695, 925
Eco91I GGTNACC 1 cut(s) 546
EcoO65I GGTNACC 1 cut(s) 546
EcoRII CCWGG 3 cut(s) 389, 528, 1141
EcoT14I CCWWGG 2 cut(s) 852, 903
ErhI CCWWGG 2 cut(s) 852, 903
Esp3I CGTCTC 2 cut(s) 301, 337
FaeI CATG 3 cut(s) 262, 907, 1336
FaiI YATR 8 cut(s) 260, 368, 509, 627, 629, 905, 1131, 1334
FaqI GGGAC 5 cut(s) 176, 503, 511, 613, 944
FatI CATG 3 cut(s) 258, 903, 1332
FauI CCCGC 5 cut(s) 188, 379, 490, 590, 1343
FblI GTMKAC 1 cut(s) 114
Fnu4HI GCNGC 8 cut(s) 6, 9, 247, 250, 396, 414, 675, 692
FokI GGATG 5 cut(s) 59, 72, 570, 869, 1325
Fsp4HI GCNGC 8 cut(s) 6, 9, 247, 250, 396, 414, 675, 692
FspBI CTAG 2 cut(s) 995, 1381
GlaI GCGC 2 cut(s) 496, 582
GluI GCNGC 8 cut(s) 6, 9, 247, 250, 396, 414, 675, 692
GsaI CCCAGC 2 cut(s) 110, 1068
HaeIII GGCC 6 cut(s) 5, 212, 364, 395, 674, 947
HgaI GACGC 3 cut(s) 43, 121, 1212
HhaI GCGC 2 cut(s) 497, 583
Hin1I GRCGYC 5 cut(s) 27, 132, 147, 321, 1204
Hin1II CATG 3 cut(s) 262, 907, 1336
Hin6I GCGC 2 cut(s) 495, 581
HinP1I GCGC 2 cut(s) 495, 581
HincII GTYRAC 1 cut(s) 115
HindII GTYRAC 1 cut(s) 115
HinfI GANTC 3 cut(s) 348, 386, 574
HphI GGTGA 3 cut(s) 115, 142, 1157
Hpy166II GTNNAC 4 cut(s) 58, 115, 241, 1171
Hpy188I TCNGA 5 cut(s) 25, 137, 439, 1123, 1274
Hpy188III TCNNGA 3 cut(s) 355, 973, 1340
Hpy8I GTNNAC 4 cut(s) 58, 115, 241, 1171
Hpy99I CGWCG 6 cut(s) 29, 32, 116, 119, 323, 608
HpyAV CCTTC 8 cut(s) 103, 280, 638, 700, 724, 802, 817, 1303
HpyCH4III ACNGT 3 cut(s) 935, 1175, 1227
HpyCH4IV ACGT 7 cut(s) 27, 36, 147, 237, 294, 321, 762
HpyCH4V TGCA 4 cut(s) 258, 262, 652, 1357
HpyF10VI GCNNNNNNNGC 5 cut(s) 51, 209, 255, 419, 578
HpyF3I CTNAG 1 cut(s) 175
HpySE526I ACGT 7 cut(s) 27, 36, 147, 237, 294, 321, 762
Hsp92I GRCGYC 5 cut(s) 27, 132, 147, 321, 1204
Hsp92II CATG 3 cut(s) 262, 907, 1336
HspAI GCGC 2 cut(s) 495, 581
Kpn2I TCCGGA 2 cut(s) 972, 1339
KroI GCCGGC 2 cut(s) 11, 670
KroNI GCCGGC 2 cut(s) 13, 672
KspI CCGCGG 1 cut(s) 678
Kzo9I GATC 6 cut(s) 16, 137, 439, 682, 939, 1079
LguI GCTCTTC 1 cut(s) 316
LmnI GCTCC 4 cut(s) 225, 756, 769, 975
LweI GCATC 2 cut(s) 192, 592
MabI ACCWGGT 1 cut(s) 1141
MaeI CTAG 2 cut(s) 995, 1381
MaeII ACGT 7 cut(s) 27, 36, 147, 237, 294, 321, 762
MaeIII GTNAC 3 cut(s) 148, 546, 1145
MalI GATC 6 cut(s) 18, 139, 441, 684, 941, 1081
MbiI CCGCTC 1 cut(s) 398
MboI GATC 6 cut(s) 16, 137, 439, 682, 939, 1079
MflI RGATCY 2 cut(s) 682, 939
MhlI GDGCHC 1 cut(s) 1162
MluCI AATT 1 cut(s) 1251
MlyI GAGTC 2 cut(s) 342, 380
MmeI TCCRAC 3 cut(s) 48, 417, 1014
MreI CGCCGGCG 1 cut(s) 11
MroI TCCGGA 2 cut(s) 972, 1339
MroNI GCCGGC 2 cut(s) 11, 670
MseI TTAA 1 cut(s) 1184
MslI CAYNNNNRTG 1 cut(s) 521
MspA1I CMGCKG 1 cut(s) 677
MspR9I CCNGG 8 cut(s) 209, 361, 391, 433, 487, 530, 552, 1143
MvaI CCWGG 3 cut(s) 391, 530, 1143
MvnI CGCG 5 cut(s) 54, 413, 474, 497, 677
MwoI GCNNNNNNNGC 5 cut(s) 51, 209, 255, 419, 578
NaeI GCCGGC 2 cut(s) 13, 672
NciI CCSGG 5 cut(s) 209, 361, 433, 487, 552
NcoI CCATGG 1 cut(s) 903
NdeII GATC 6 cut(s) 16, 137, 439, 682, 939, 1079
NgoMIV GCCGGC 2 cut(s) 11, 670
NlaIII CATG 3 cut(s) 262, 907, 1336
NlaIV GGNNCC 3 cut(s) 70, 430, 601
NmeAIII GCCGAG 1 cut(s) 973
NmuCI GTSAC 2 cut(s) 148, 1145
NspI RCATGY 2 cut(s) 262, 1336
OliI CACNNNNGTG 1 cut(s) 521
PaeI GCATGC 1 cut(s) 262
PaeR7I CTCGAG 1 cut(s) 925
PciI ACATGT 1 cut(s) 1332
PciSI GCTCTTC 1 cut(s) 316
PcsI WCGNNNNNNNCGW 4 cut(s) 33, 327, 459, 600
PdiI GCCGGC 2 cut(s) 13, 672
PfeI GAWTC 1 cut(s) 574
PflMI CCANNNNNTGG 1 cut(s) 1295
PkrI GCNGC 8 cut(s) 7, 10, 248, 251, 397, 415, 676, 693
PleI GAGTC 2 cut(s) 342, 380
PpsI GAGTC 2 cut(s) 342, 380
Ppu21I YACGTR 1 cut(s) 763
PscI ACATGT 1 cut(s) 1332
Psp6I CCWGG 3 cut(s) 389, 528, 1141
PspEI GGTNACC 1 cut(s) 546
PspFI CCCAGC 2 cut(s) 106, 1064
PspGI CCWGG 3 cut(s) 389, 528, 1141
PspN4I GGNNCC 3 cut(s) 70, 430, 601
PspPI GGNCC 6 cut(s) 211, 363, 393, 600, 733, 826
PspXI VCTCGAGB 1 cut(s) 925
PsuI RGATCY 2 cut(s) 682, 939
RsaI GTAC 3 cut(s) 344, 458, 1331
RsaNI GTAC 3 cut(s) 343, 457, 1330
RseI CAYNNNNRTG 1 cut(s) 521
SacII CCGCGG 1 cut(s) 678
SalI GTCGAC 1 cut(s) 113
SapI GCTCTTC 1 cut(s) 316
SaqAI TTAA 1 cut(s) 1184
SatI GCNGC 8 cut(s) 6, 9, 247, 250, 396, 414, 675, 692
Sau3AI GATC 6 cut(s) 16, 137, 439, 682, 939, 1079
Sau96I GGNCC 6 cut(s) 211, 363, 393, 600, 733, 826
SchI GAGTC 2 cut(s) 342, 380
ScrFI CCNGG 8 cut(s) 209, 361, 391, 433, 487, 530, 552, 1143
SduI GDGCHC 1 cut(s) 1162
SexAI ACCWGGT 1 cut(s) 1141
SfaNI GCATC 2 cut(s) 192, 592
Sfr274I CTCGAG 1 cut(s) 925
Sfr303I CCGCGG 1 cut(s) 678
SgrAI CRCCGGYG 2 cut(s) 11, 128
SgrBI CCGCGG 1 cut(s) 678
SgrDI CGTCGACG 1 cut(s) 113
SinI GGWCC 3 cut(s) 600, 733, 826
SlaI CTCGAG 1 cut(s) 925
SmiMI CAYNNNNRTG 1 cut(s) 521
SmlI CTYRAG 1 cut(s) 925
SmoI CTYRAG 1 cut(s) 925
SphI GCATGC 1 cut(s) 262
Sse9I AATT 1 cut(s) 1251
SspMI CTAG 2 cut(s) 995, 1381
StyD4I CCNGG 8 cut(s) 207, 359, 389, 431, 485, 528, 550, 1141
StyI CCWWGG 2 cut(s) 852, 903
TaaI ACNGT 3 cut(s) 935, 1175, 1227
TaiI ACGT 7 cut(s) 30, 39, 150, 240, 297, 324, 765
TaqI TCGA 6 cut(s) 30, 96, 114, 339, 926, 1304
TaqII GACCGA 3 cut(s) 325, 529, 617
TasI AATT 1 cut(s) 1251
TatI WGTACW 1 cut(s) 1329
TauI GCSGC 8 cut(s) 8, 11, 249, 252, 398, 416, 677, 694
TfiI GAWTC 1 cut(s) 574
Tru1I TTAA 1 cut(s) 1184
Tru9I TTAA 1 cut(s) 1184
TscAI CASTG 3 cut(s) 1042, 1180, 1230
TseFI GTSAC 2 cut(s) 148, 1145
Tsp45I GTSAC 2 cut(s) 148, 1145
TspDTI ATGAA 5 cut(s) 469, 657, 821, 827, 873
TspGWI ACGGA 2 cut(s) 360, 441
TspRI CASTG 3 cut(s) 1042, 1180, 1230
Van91I CCANNNNNTGG 1 cut(s) 1295
VpaK11BI GGWCC 3 cut(s) 600, 733, 826
XceI RCATGY 2 cut(s) 262, 1336
XhoI CTCGAG 1 cut(s) 925
XmiI GTMKAC 1 cut(s) 114
XspI CTAG 2 cut(s) 995, 1381
ZraI GACGTC 3 cut(s) 28, 148, 322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.