Rorug06G0100700

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
13384484 .. 13384814
331 bp
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UTR
Exon/CDS
Intron
Rorug06G0100700.1

Sequence Viewer

Length: 261 bp
ATGAGCTTAGAGAATCGGCAAAGAGAAGAGCTGAACAACAGAAGAAAAAGAGGGATGAAAAGAAGGCAGCAGCAAGGGCATCAAAAGCATCAACAACTACAGCTGCTTCAAGCAAGGGCAGACCTCCAAAAGCTCCTTCAAGCAAGGGAAGACCAGCTGCTTCTTCACAGGCTTCATCAGGGTCATCTGCAAGGATCCGGGCAAATGCAAACAATGGTGGAAAATAGAGCAGGAGCTGTATGGGTTAGCAACCAAGGTTAA

Protein Analysis

86

Amino Acids

10.16

Weight (kDa)

11.59

Isoelectric Point (pI)

65.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 189, 202
AgsI TTSAA 2 cut(s) 110, 140
AjuI GAANNNNNNNTTGG 2 cut(s) 120, 152
AluBI AGCT 6 cut(s) 6, 31, 103, 133, 157, 236
AluI AGCT 6 cut(s) 6, 31, 103, 133, 157, 236
AlwI GGATC 2 cut(s) 189, 202
AlwNI CAGNNNCTG 1 cut(s) 236
ApeKI GCWGC 4 cut(s) 67, 70, 103, 157
AsuC2I CCSGG 1 cut(s) 199
BamHI GGATCC 1 cut(s) 194
BbsI GAAGAC 1 cut(s) 156
BbvI GCAGC 4 cut(s) 79, 82, 90, 144
BcnI CCSGG 1 cut(s) 199
BfmI CTRYAG 1 cut(s) 98
BisI GCNGC 4 cut(s) 68, 71, 104, 158
BlsI GCNGC 4 cut(s) 69, 72, 105, 159
Bme1390I CCNGG 1 cut(s) 199
BmiI GGNNCC 1 cut(s) 196
BmrFI CCNGG 1 cut(s) 199
BmsI GCATC 2 cut(s) 88, 97
BpiI GAAGAC 1 cut(s) 156
BpuMI CCSGG 1 cut(s) 199
BsaJI CCNNGG 1 cut(s) 253
BseDI CCNNGG 1 cut(s) 253
BseGI GGATG 1 cut(s) 60
BseXI GCAGC 4 cut(s) 79, 82, 90, 144
BsiSI CCGG 1 cut(s) 198
Bsp143I GATC 1 cut(s) 194
BspLI GGNNCC 1 cut(s) 196
BspPI GGATC 2 cut(s) 189, 202
BspQI GCTCTTC 1 cut(s) 21
BssECI CCNNGG 1 cut(s) 253
BssMI GATC 1 cut(s) 194
BssT1I CCWWGG 1 cut(s) 253
Bst6I CTCTTC 1 cut(s) 21
BstDEI CTNAG 1 cut(s) 7
BstF5I GGATG 1 cut(s) 60
BstKTI GATC 1 cut(s) 197
BstMBI GATC 1 cut(s) 194
BstMWI GCNNNNNNNGC 2 cut(s) 76, 85
BstSCI CCNGG 1 cut(s) 197
BstSFI CTRYAG 1 cut(s) 98
BstV1I GCAGC 4 cut(s) 79, 82, 90, 144
BstV2I GAAGAC 1 cut(s) 156
BstX2I RGATCY 1 cut(s) 194
BstYI RGATCY 1 cut(s) 194
BtsCI GGATG 1 cut(s) 60
CaiI CAGNNNCTG 1 cut(s) 236
CviJI RGCY 7 cut(s) 6, 31, 103, 133, 157, 172, 236
CviKI_1 RGCY 7 cut(s) 6, 31, 103, 133, 157, 172, 236
DdeI CTNAG 1 cut(s) 7
DpnI GATC 1 cut(s) 196
DpnII GATC 1 cut(s) 194
Eam1104I CTCTTC 1 cut(s) 21
EarI CTCTTC 1 cut(s) 21
Eco130I CCWWGG 1 cut(s) 253
EcoT14I CCWWGG 1 cut(s) 253
ErhI CCWWGG 1 cut(s) 253
FaiI YATR 1 cut(s) 241
Fnu4HI GCNGC 4 cut(s) 68, 71, 104, 158
FokI GGATG 1 cut(s) 67
Fsp4HI GCNGC 4 cut(s) 68, 71, 104, 158
GluI GCNGC 4 cut(s) 68, 71, 104, 158
HapII CCGG 1 cut(s) 198
HinfI GANTC 1 cut(s) 13
HpaII CCGG 1 cut(s) 198
HpyAV CCTTC 2 cut(s) 57, 146
HpyCH4V TGCA 2 cut(s) 190, 208
HpyF10VI GCNNNNNNNGC 2 cut(s) 76, 85
HpyF3I CTNAG 1 cut(s) 7
Kzo9I GATC 1 cut(s) 194
LguI GCTCTTC 1 cut(s) 21
LmnI GCTCC 2 cut(s) 138, 233
LpnPI CCDG 5 cut(s) 154, 164, 167, 211, 216
Lsp1109I GCAGC 4 cut(s) 79, 82, 90, 144
LweI GCATC 2 cut(s) 88, 97
MalI GATC 1 cut(s) 196
MboI GATC 1 cut(s) 194
MboII GAAGA 4 cut(s) 38, 54, 155, 161
MflI RGATCY 1 cut(s) 194
MnlI CCTC 2 cut(s) 44, 134
MseI TTAA 1 cut(s) 259
MspA1I CMGCKG 2 cut(s) 103, 157
MspI CCGG 1 cut(s) 198
MspR9I CCNGG 1 cut(s) 199
MwoI GCNNNNNNNGC 2 cut(s) 76, 85
NciI CCSGG 1 cut(s) 199
NdeII GATC 1 cut(s) 194
NlaIV GGNNCC 1 cut(s) 196
PciSI GCTCTTC 1 cut(s) 21
PfeI GAWTC 1 cut(s) 13
PkrI GCNGC 4 cut(s) 69, 72, 105, 159
PspN4I GGNNCC 1 cut(s) 196
PstNI CAGNNNCTG 1 cut(s) 236
PsuI RGATCY 1 cut(s) 194
PvuII CAGCTG 2 cut(s) 103, 157
SapI GCTCTTC 1 cut(s) 21
SaqAI TTAA 1 cut(s) 259
SatI GCNGC 4 cut(s) 68, 71, 104, 158
Sau3AI GATC 1 cut(s) 194
ScrFI CCNGG 1 cut(s) 199
SetI ASST 8 cut(s) 8, 33, 105, 126, 135, 159, 238, 259
SfaNI GCATC 2 cut(s) 88, 97
SfcI CTRYAG 1 cut(s) 98
StyD4I CCNGG 1 cut(s) 197
StyI CCWWGG 1 cut(s) 253
TfiI GAWTC 1 cut(s) 13
Tru1I TTAA 1 cut(s) 259
Tru9I TTAA 1 cut(s) 259
TseI GCWGC 4 cut(s) 67, 70, 103, 157
TspDTI ATGAA 2 cut(s) 71, 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.