TPL-binding domain in jasmonate signalling
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G07255 |
| fragaria_vesca | FvH4_2g18440 FvH4_2g18440 |
| malus_domestica | MD05G1170300.v1.1 MD10G1158500.v1.1 |
| prunus_persica | Prupe.8G197500_v2.0.a1 |
| pyrus_communis | pycom05g15750 |
| rosa_chinensis | RchiOBHm_Chr6g0283921 |
| rosa_laevigata | RLG00000012786 |
| rosa_multiflora | Rmu_ssc0000442.1_g000021 |
| rosa_roxburghii | Rroxscaffold_6G00425120 Rroxscaffold_7G00185060 |
| rosa_rugosa | Rorug06G0158500 |
| rosa_samantha | Rh6AG271500 Rh6BG272700 Rh6CG273900 Rh6DG266800 |
| rosa_wichuraiana | Rw6G023420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 111 |
| AcuI | CTGAAG | 1 cut(s) | 153 |
| AfaI | GTAC | 1 cut(s) | 208 |
| AluBI | AGCT | 3 cut(s) | 13, 122, 137 |
| AluI | AGCT | 3 cut(s) | 13, 122, 137 |
| Ama87I | CYCGRG | 1 cut(s) | 18 |
| AoxI | GGCC | 1 cut(s) | 15 |
| AspS9I | GGNCC | 1 cut(s) | 16 |
| AsuC2I | CCSGG | 2 cut(s) | 19, 20 |
| AvaI | CYCGRG | 1 cut(s) | 18 |
| BcnI | CCSGG | 2 cut(s) | 19, 20 |
| BfaI | CTAG | 2 cut(s) | 173, 204 |
| BmcAI | AGTACT | 1 cut(s) | 208 |
| Bme1390I | CCNGG | 2 cut(s) | 19, 20 |
| BmeT110I | CYCGRG | 1 cut(s) | 18 |
| BmgT120I | GGNCC | 1 cut(s) | 16 |
| BmrFI | CCNGG | 2 cut(s) | 19, 20 |
| BmsI | GCATC | 1 cut(s) | 174 |
| BpuMI | CCSGG | 2 cut(s) | 19, 20 |
| BsaJI | CCNNGG | 2 cut(s) | 18, 51 |
| Bse3DI | GCAATG | 1 cut(s) | 94 |
| BseDI | CCNNGG | 2 cut(s) | 18, 51 |
| BseGI | GGATG | 1 cut(s) | 237 |
| BseMI | GCAATG | 1 cut(s) | 94 |
| BseYI | CCCAGC | 1 cut(s) | 137 |
| BshFI | GGCC | 1 cut(s) | 17 |
| BsiHKCI | CYCGRG | 1 cut(s) | 18 |
| BsiSI | CCGG | 1 cut(s) | 19 |
| BsnI | GGCC | 1 cut(s) | 17 |
| BsoBI | CYCGRG | 1 cut(s) | 18 |
| Bsp143I | GATC | 1 cut(s) | 7 |
| BspACI | CCGC | 1 cut(s) | 111 |
| BspANI | GGCC | 1 cut(s) | 17 |
| BsrDI | GCAATG | 1 cut(s) | 94 |
| BssECI | CCNNGG | 2 cut(s) | 18, 51 |
| BssMI | GATC | 1 cut(s) | 7 |
| BssT1I | CCWWGG | 1 cut(s) | 51 |
| Bst4CI | ACNGT | 1 cut(s) | 67 |
| BstC8I | GCNNGC | 1 cut(s) | 15 |
| BstF5I | GGATG | 1 cut(s) | 237 |
| BstKTI | GATC | 1 cut(s) | 10 |
| BstMBI | GATC | 1 cut(s) | 7 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 143 |
| BstSCI | CCNGG | 2 cut(s) | 17, 18 |
| BsuRI | GGCC | 1 cut(s) | 17 |
| BtsCI | GGATG | 1 cut(s) | 237 |
| Cac8I | GCNNGC | 1 cut(s) | 15 |
| Cfr13I | GGNCC | 1 cut(s) | 16 |
| Cfr9I | CCCGGG | 1 cut(s) | 18 |
| Csp6I | GTAC | 1 cut(s) | 207 |
| CviJI | RGCY | 6 cut(s) | 13, 17, 56, 122, 137, 203 |
| CviKI_1 | RGCY | 6 cut(s) | 13, 17, 56, 122, 137, 203 |
| CviQI | GTAC | 1 cut(s) | 207 |
| DpnI | GATC | 1 cut(s) | 9 |
| DpnII | GATC | 1 cut(s) | 7 |
| EciI | GGCGGA | 1 cut(s) | 126 |
| Eco130I | CCWWGG | 1 cut(s) | 51 |
| Eco57I | CTGAAG | 1 cut(s) | 153 |
| Eco88I | CYCGRG | 1 cut(s) | 18 |
| EcoT14I | CCWWGG | 1 cut(s) | 51 |
| ErhI | CCWWGG | 1 cut(s) | 51 |
| FaiI | YATR | 3 cut(s) | 179, 218, 220 |
| FspBI | CTAG | 2 cut(s) | 173, 204 |
| GsaI | CCCAGC | 1 cut(s) | 141 |
| HaeIII | GGCC | 1 cut(s) | 17 |
| HapII | CCGG | 1 cut(s) | 19 |
| HindIII | AAGCTT | 1 cut(s) | 120 |
| HpaII | CCGG | 1 cut(s) | 19 |
| Hpy166II | GTNNAC | 1 cut(s) | 46 |
| Hpy188I | TCNGA | 1 cut(s) | 133 |
| Hpy8I | GTNNAC | 1 cut(s) | 46 |
| HpyCH4III | ACNGT | 1 cut(s) | 67 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 143 |
| Kzo9I | GATC | 1 cut(s) | 7 |
| LpnPI | CCDG | 2 cut(s) | 32, 123 |
| LweI | GCATC | 1 cut(s) | 174 |
| MaeI | CTAG | 2 cut(s) | 173, 204 |
| MalI | GATC | 1 cut(s) | 9 |
| MboI | GATC | 1 cut(s) | 7 |
| MboII | GAAGA | 1 cut(s) | 84 |
| MluCI | AATT | 1 cut(s) | 166 |
| MmeI | TCCRAC | 1 cut(s) | 49 |
| MnlI | CCTC | 3 cut(s) | 26, 156, 198 |
| MspA1I | CMGCKG | 1 cut(s) | 13 |
| MspI | CCGG | 1 cut(s) | 19 |
| MspR9I | CCNGG | 2 cut(s) | 19, 20 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 143 |
| NciI | CCSGG | 2 cut(s) | 19, 20 |
| NdeII | GATC | 1 cut(s) | 7 |
| PspFI | CCCAGC | 1 cut(s) | 137 |
| PspPI | GGNCC | 1 cut(s) | 16 |
| PvuII | CAGCTG | 1 cut(s) | 13 |
| RsaI | GTAC | 1 cut(s) | 208 |
| RsaNI | GTAC | 1 cut(s) | 207 |
| Sau3AI | GATC | 1 cut(s) | 7 |
| Sau96I | GGNCC | 1 cut(s) | 16 |
| ScaI | AGTACT | 1 cut(s) | 208 |
| ScrFI | CCNGG | 2 cut(s) | 19, 20 |
| SetI | ASST | 5 cut(s) | 15, 37, 124, 139, 201 |
| SfaNI | GCATC | 1 cut(s) | 174 |
| SmaI | CCCGGG | 1 cut(s) | 20 |
| Sse9I | AATT | 1 cut(s) | 166 |
| SsiI | CCGC | 1 cut(s) | 111 |
| SspMI | CTAG | 2 cut(s) | 173, 204 |
| StyD4I | CCNGG | 2 cut(s) | 17, 18 |
| StyI | CCWWGG | 1 cut(s) | 51 |
| TaaI | ACNGT | 1 cut(s) | 67 |
| TaqI | TCGA | 1 cut(s) | 31 |
| TasI | AATT | 1 cut(s) | 166 |
| TatI | WGTACW | 1 cut(s) | 206 |
| TspDTI | ATGAA | 1 cut(s) | 95 |
| TspMI | CCCGGG | 1 cut(s) | 18 |
| XmaI | CCCGGG | 1 cut(s) | 18 |
| XspI | CTAG | 2 cut(s) | 173, 204 |
| ZrmI | AGTACT | 1 cut(s) | 208 |