Rorug06G0228800

ASCH

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
36770149 .. 36777146
6998 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0228800.1

Sequence Viewer

Length: 2661 bp
ATGGCTTTGATAGGAAGAGTGCACCCTGATTGCGTAAACGTTGCAAATCCGTACCATGAATGCACTGAAAATTGCCTGAGAAAAATTGCAGAAGGGAAAGGCCGGAAGAATAAAAAGAAATCAGATAATGGCGGTGATATAAAAGATGGTGAGTTCAACAGAAAGATGGCTGGAGAGAGAAGAGTGGATGCAACTAGGGCATCTAATCCTTACCATCAATCTGGTCAATCTTTTCCGAAAAGAACTGCCGGTGGTGAAGCTCGTGGGGATATAAAAGAATCAGGCTCCATACTTGATGTTCCTATATTGGGTGGACGAAAAGAGAGATCCCGACCAAAGACTCCTCAAGATCTTGACAATGTATCTGACCGAAGTGCTGTTTATCCTTATGATGCTCAATCATCTCCATCTAAGGACAAGGTGAACGTAGAGAATGGGTCTGTCCTTGATGATCCTATATTTGGAAAAAGAAAGCCAGTCTCCCAAACAAGGTCTGCTGAAGAGCATGAAAATGGTCAAGGTGTTGATCCTTCATCATTTCCAGAAAAGCTGAAAATAGAGAACGGCTCTGCCCTTGATGATCCTATATTTGGCAGAAGAAAGCAGGTAGCCCAGCCAAAGCCCCATGAAGAGCTTGACAATGGATCCGGTCAAGGTTCAGTCAATCCTTCTGGTTCTCCCATGTCTCCATCTAATGAAATTGTGAAAATAGGGAATGGCTCCACCCTTGATGATCTTTTATTTGGCCGCAAAAAGCAGGGATCTGAACCAAAGCCTCAAGAAGAGATTGAGAATGTACCTGTTGTGAAATTAGATAATGATGAGTATAAGTCTTATTCTGGACCGCTTGCTCAAGTAAAAGATCCTTCTTTGAACAACAAGCAAATCAAGTCCTCTGGGGCAGTGCCTACATCTGGAATTATCAAAATGACCCCCTCTCTTTCTCTCCCCACGCAAAATGGTGGAGAAGGTGCCACTGACACACCTTCTGAAAACAGAAGCTTCAGTTTCTCAGGGTCTCCCTATGTTTATGAAGAGAGTGATGATGACGATGCACGATCTGTCAATTCTGATTCCAGTGTTTCTGTGGGAAAGTACCGTGTGAAAGGAAGCTTATGTTCCATTCTCCAGTCAATCTTTGACAAGTATGGTGATATAGCAGCAAGCTGTCAATTGGAATCAATTGTCATTCGCTCTTATTACCTCGAGTGTGTCTGTTATGTGGTTCAAGAGTTGAAACGCACTTCAGTGAAGCAGCTGACAAAGTCAAAAGTCAAAGAAATGTCATCTATGCTCAAGGATGTAGAATCTTCAGGAATGGATGTTAGTTGGCTTCGTCTCATGCTCAATGAATGTGCACAATCCATTGATCTCGTGAGTCAGCACCGAGCATTCGAACTAGAAAAGGCCAACTGTGATCGTGGCATTGAATCAATAAGGAAAGAACTAGAGGCCCAGATGGAGGCTTTGGCTCTGAAAGAAAAGGAGGTTGCTGATGCCAAGAAGCAAGTTTCTGAAACCAGAGCCCATCTGAGGGAGCTTGAGCTCAAATCATCTATTTTGAGTGAGACTGTTAATAATCTGAAGTCCAAGGTTGAAAATCTTCATAGCAAATCATTGTTGGACAAGGAAAAGTTGAATTGTTTCTTGTACTTGCATAATATAACAGAGTCTCCTGTAATAGCTGCTATCGGTAGCTACTGCAAAGATATAGAAACAGCCGAAATCATGTCTGATGAAGGAAGAGTGCACCGGGATTGCAGGAATGCATCCAATCCCTACCACGAATGCAGCGAGTTTTGCTTCAAAGTTATTGCTGAAACCAAAGCTCGGATGGATCAAAATCAATCAGAATCTGTACAAGTTAGTGGTGGTAGTGGCAAATCAAAATTAGAGGCTGCTCAGCAAGAGGAAGATCTAGATAGACCATCAGAGACTGATGAACATGCTGGTGATGGTGATGAGCCTCCTGTTGACGAGGAGGAGAATATGGAAGGAGACTTCACAAAGTTCACAGGGAGGAAGAAAAAGTTGTGGGAATTAAGGATGAAGATGAATAAGGCTAGGAAAGCAAATCAAACAGATATTGCAGCTGAAAAGAAAAGAATGGAACCTCCACAAGAATCAAGGGGCATTTCTAAACAAAAATGGCTTGAAGAGAGGAAAAAAAGAATTGGTAAACTTCTAGATGCAAATGGTTTGGATATGAAAACCGCTTACATGCTAGATACACAAGAGATGGCAGAGTCAAAGTACAAGAAATGGGAAAAGGATCCTGCCCCATATGGCTGGGATGTTTTTAATCAGAAAACATTGTATGATGCATACAAAAAGCGAACAAATAATATTGATATTGACTTGGAAGATTACAATAAGATGAAAGAAGAAGATCCAGAGTTCTACCGTGAAGCTTCCAGCCTTCAATATGGGAAGGCTCCAAAGATCTCAGAGGATAAAATTGACAAGATGGTGAAGGAACTAAAGGACCAGGAAGAGAAGAAAAAGAAATTCAGCAGGAGGAGGAGGTTCCATGATGAGAAGGATATTGACTCGATCAATGACCGTAATGAGCATTTTAACAAGAAGATTGAGCGAGCTTTTGGTAAATACACACTGGAAATCAAAAACAATCTCGAGCGAGGAACTGCATTGCCCGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

886

Amino Acids

99.65

Weight (kDa)

6.06

Isoelectric Point (pI)

53.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PEARLI-4 PF05278 344 - 542 4.8e-63 Arabidopsis phospholipase-like protein (PEARLI 4)
SYF2 PF08231 732 - 879 2.3e-36 SYF2 splicing factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 595
AccB1I GGYRCC 1 cut(s) 971
AciI CCGC 4 cut(s) 132, 748, 845, 2214
AclI AACGTT 1 cut(s) 39
AcoI YGGCCR 1 cut(s) 745
AcsI RAATTY 1 cut(s) 2507
AcuI CTGAAG 5 cut(s) 519, 988, 1230, 1296, 1604
AfaI GTAC 6 cut(s) 53, 798, 1097, 1652, 1860, 2255
AfiI CCNNNNNNNGG 9 cut(s) 308, 461, 489, 590, 914, 1462, 1533, 1534, 1830
AjnI CCWGG 1 cut(s) 2487
AleI CACNNNNGTG 1 cut(s) 1247
Alw21I GWGCWC 4 cut(s) 24, 1360, 1548, 1752
Alw26I GTCTC 8 cut(s) 484, 690, 1023, 1343, 1562, 1677, 1928, 1992
Alw44I GTGCAC 3 cut(s) 20, 1356, 1748
AlwNI CAGNNNCTG 2 cut(s) 1856, 1937
Ama87I CYCGRG 2 cut(s) 1205, 2633
AoxI GGCC 4 cut(s) 100, 745, 1407, 1452
ApaLI GTGCAC 3 cut(s) 20, 1356, 1748
ApeKI GCWGC 6 cut(s) 1160, 1255, 1685, 1791, 1898, 2090
ApoI RAATTY 1 cut(s) 2507
Asp700I GAANNNNTTC 2 cut(s) 1602, 1643
AspS9I GGNCC 3 cut(s) 842, 1453, 2485
AsuC2I CCSGG 1 cut(s) 1754
AsuHPI GGTGA 8 cut(s) 146, 161, 266, 433, 1163, 1964, 1970, 2482
AsuII TTCGAA 1 cut(s) 1395
AvaI CYCGRG 2 cut(s) 1205, 2633
AvaII GGWCC 2 cut(s) 842, 2485
BaeGI GKGCMC 3 cut(s) 24, 1360, 1752
BamHI GGATCC 2 cut(s) 644, 2272
BanI GGYRCC 1 cut(s) 971
BanII GRGCYC 2 cut(s) 1528, 1548
BauI CACGAG 2 cut(s) 261, 1373
Bbv12I GWGCWC 4 cut(s) 24, 1360, 1548, 1752
BbvI GCAGC 6 cut(s) 1172, 1267, 1672, 1803, 1885, 2102
BceAI ACGGC 1 cut(s) 580
BciT130I CCWGG 1 cut(s) 2489
BcnI CCSGG 1 cut(s) 1754
BcoDI GTCTC 8 cut(s) 484, 690, 1023, 1343, 1562, 1677, 1928, 1992
BfaI CTAG 7 cut(s) 195, 1400, 1448, 1919, 2064, 2186, 2225
BfuAI ACCTGC 1 cut(s) 595
BglII AGATCT 3 cut(s) 349, 1915, 2442
BisI GCNGC 7 cut(s) 748, 1161, 1256, 1686, 1792, 1899, 2091
BlpI GCTNAGC 1 cut(s) 1902
BlsI GCNGC 7 cut(s) 749, 1162, 1257, 1687, 1793, 1900, 2092
Bme1390I CCNGG 2 cut(s) 1754, 2489
Bme18I GGWCC 2 cut(s) 842, 2485
BmeT110I CYCGRG 2 cut(s) 1205, 2633
BmgT120I GGNCC 3 cut(s) 842, 1453, 2485
BmiI GGNNCC 8 cut(s) 286, 646, 721, 973, 2112, 2274, 2436, 2528
BmrFI CCNGG 2 cut(s) 1754, 2489
BmsI GCATC 8 cut(s) 178, 209, 382, 1042, 1486, 1778, 2179, 2311
BplI GAGNNNNNCTC 2 cut(s) 551, 583
BpmI CTGGAG 2 cut(s) 192, 1112
Bpu1102I GCTNAGC 1 cut(s) 1902
Bpu14I TTCGAA 1 cut(s) 1395
BpuEI CTTGAG 5 cut(s) 330, 762, 837, 1280, 1562
BpuMI CCSGG 1 cut(s) 1754
BsaBI GATNNNNATC 1 cut(s) 1842
BsaI GGTCTC 1 cut(s) 1023
BsaJI CCNNGG 1 cut(s) 1590
BsaWI WCCGGW 1 cut(s) 647
BsaXI ACNNNNNCTCC 2 cut(s) 1657, 1687
Bsc4I CCNNNNNNNGG 9 cut(s) 308, 461, 489, 590, 914, 1462, 1533, 1534, 1830
Bse118I RCCGGY 1 cut(s) 248
Bse1I ACTGG 4 cut(s) 476, 1077, 1129, 2619
Bse3DI GCAATG 1 cut(s) 2648
Bse8I GATNNNNATC 1 cut(s) 1842
BseBI CCWGG 1 cut(s) 2489
BseDI CCNNGG 1 cut(s) 1590
BseGI GGATG 7 cut(s) 193, 1306, 1327, 1769, 1839, 2052, 2299
BseJI GATNNNNATC 1 cut(s) 1842
BseLI CCNNNNNNNGG 9 cut(s) 308, 461, 489, 590, 914, 1462, 1533, 1534, 1830
BseMI GCAATG 1 cut(s) 2648
BseMII CTCAG 5 cut(s) 68, 1026, 1523, 1916, 2460
BseNI ACTGG 4 cut(s) 476, 1077, 1129, 2619
BseRI GAGGAG 5 cut(s) 333, 1994, 1997, 2533, 2536
BseSI GKGCMC 3 cut(s) 24, 1360, 1752
BseXI GCAGC 6 cut(s) 1172, 1267, 1672, 1803, 1885, 2102
BseYI CCCAGC 2 cut(s) 612, 2289
BshFI GGCC 4 cut(s) 102, 747, 1409, 1454
BshNI GGYRCC 1 cut(s) 971
BsiHKAI GWGCWC 4 cut(s) 24, 1360, 1548, 1752
BsiHKCI CYCGRG 2 cut(s) 1205, 2633
BsiSI CCGG 4 cut(s) 103, 249, 648, 1753
BslI CCNNNNNNNGG 9 cut(s) 308, 461, 489, 590, 914, 1462, 1533, 1534, 1830
BsmAI GTCTC 8 cut(s) 484, 690, 1023, 1343, 1562, 1677, 1928, 1992
BsmBI CGTCTC 1 cut(s) 1343
BsmI GAATGC 4 cut(s) 65, 1391, 1771, 1793
BsnI GGCC 4 cut(s) 102, 747, 1409, 1454
Bso31I GGTCTC 1 cut(s) 1023
BsoBI CYCGRG 2 cut(s) 1205, 2633
Bsp119I TTCGAA 1 cut(s) 1395
Bsp1286I GDGCHC 5 cut(s) 24, 1360, 1528, 1548, 1752
Bsp1407I TGTACA 1 cut(s) 1858
Bsp1720I GCTNAGC 1 cut(s) 1902
BspACI CCGC 4 cut(s) 132, 748, 845, 2214
BspANI GGCC 4 cut(s) 102, 747, 1409, 1454
BspCNI CTCAG 5 cut(s) 69, 1025, 1524, 1915, 2459
BspLI GGNNCC 8 cut(s) 286, 646, 721, 973, 2112, 2274, 2436, 2528
BspMI ACCTGC 1 cut(s) 595
BspQI GCTCTTC 2 cut(s) 495, 624
BspT104I TTCGAA 1 cut(s) 1395
BspT107I GGYRCC 1 cut(s) 971
BspTNI GGTCTC 1 cut(s) 1023
BsrDI GCAATG 1 cut(s) 2648
BsrFI RCCGGY 1 cut(s) 248
BsrGI TGTACA 1 cut(s) 1858
BsrI ACTGG 4 cut(s) 476, 1077, 1129, 2619
BssAI RCCGGY 1 cut(s) 248
BssECI CCNNGG 1 cut(s) 1590
BssSI CACGAG 2 cut(s) 261, 1373
BssT1I CCWWGG 1 cut(s) 1590
Bst2BI CACGAG 2 cut(s) 261, 1373
Bst2UI CCWGG 1 cut(s) 2489
Bst4CI ACNGT 5 cut(s) 1100, 1415, 1573, 2405, 2564
Bst6I CTCTTC 9 cut(s) 10, 175, 495, 624, 777, 1029, 1738, 2151, 2487
BstAUI TGTACA 1 cut(s) 1858
BstBI TTCGAA 1 cut(s) 1395
BstC8I GCNNGC 3 cut(s) 849, 1165, 2595
BstDEI CTNAG 6 cut(s) 77, 411, 1012, 1532, 1902, 2446
BstF5I GGATG 7 cut(s) 193, 1306, 1327, 1769, 1839, 2052, 2299
BstMAI GTCTC 8 cut(s) 484, 690, 1023, 1343, 1562, 1677, 1928, 1992
BstMWI GCNNNNNNNGC 3 cut(s) 197, 1800, 2069
BstNI CCWGG 1 cut(s) 2489
BstNSI RCATGY 2 cut(s) 1949, 2224
BstSCI CCNGG 2 cut(s) 1752, 2487
BstSLI GKGCMC 3 cut(s) 24, 1360, 1752
BstV1I GCAGC 6 cut(s) 1172, 1267, 1672, 1803, 1885, 2102
BstX2I RGATCY 9 cut(s) 326, 349, 644, 761, 862, 1915, 2272, 2389, 2442
BstXI CCANNNNNNTGG 2 cut(s) 221, 2289
BstYI RGATCY 9 cut(s) 326, 349, 644, 761, 862, 1915, 2272, 2389, 2442
BsuRI GGCC 4 cut(s) 102, 747, 1409, 1454
BtsCI GGATG 7 cut(s) 193, 1306, 1327, 1769, 1839, 2052, 2299
BtsI GCAGTG 1 cut(s) 909
BtsIMutI CAGTG 6 cut(s) 63, 909, 975, 1084, 1254, 2612
BveI ACCTGC 1 cut(s) 595
Cac8I GCNNGC 3 cut(s) 849, 1165, 2595
CaiI CAGNNNCTG 2 cut(s) 1856, 1937
Cfr10I RCCGGY 1 cut(s) 248
Cfr13I GGNCC 3 cut(s) 842, 1453, 2485
Csp6I GTAC 6 cut(s) 52, 797, 1096, 1651, 1859, 2254
CviAII CATG 9 cut(s) 56, 506, 626, 682, 1342, 1729, 1946, 2221, 2531
CviQI GTAC 6 cut(s) 52, 797, 1096, 1651, 1859, 2254
DdeI CTNAG 6 cut(s) 77, 411, 1012, 1532, 1902, 2446
EaeI YGGCCR 1 cut(s) 745
Eam1104I CTCTTC 9 cut(s) 10, 175, 495, 624, 777, 1029, 1738, 2151, 2487
EarI CTCTTC 9 cut(s) 10, 175, 495, 624, 777, 1029, 1738, 2151, 2487
Ecl136II GAGCTC 1 cut(s) 1546
Eco130I CCWWGG 1 cut(s) 1590
Eco24I GRGCYC 2 cut(s) 1528, 1548
Eco31I GGTCTC 1 cut(s) 1023
Eco47I GGWCC 2 cut(s) 842, 2485
Eco53kI GAGCTC 1 cut(s) 1546
Eco57I CTGAAG 5 cut(s) 519, 988, 1230, 1296, 1604
Eco88I CYCGRG 2 cut(s) 1205, 2633
EcoICRI GAGCTC 1 cut(s) 1546
EcoRII CCWGG 1 cut(s) 2487
EcoT14I CCWWGG 1 cut(s) 1590
EcoT22I ATGCAT 2 cut(s) 1771, 2326
EcoT38I GRGCYC 2 cut(s) 1528, 1548
ErhI CCWWGG 1 cut(s) 1590
Esp3I CGTCTC 1 cut(s) 1343
FaeI CATG 9 cut(s) 59, 509, 629, 685, 1345, 1732, 1949, 2224, 2534
FatI CATG 9 cut(s) 55, 505, 625, 681, 1341, 1728, 1945, 2220, 2530
FauNDI CATATG 1 cut(s) 2284
Fnu4HI GCNGC 7 cut(s) 748, 1161, 1256, 1686, 1792, 1899, 2091
FokI GGATG 7 cut(s) 200, 1313, 1334, 1756, 1846, 2059, 2306
FriOI GRGCYC 2 cut(s) 1528, 1548
Fsp4HI GCNGC 7 cut(s) 748, 1161, 1256, 1686, 1792, 1899, 2091
FspBI CTAG 7 cut(s) 195, 1400, 1448, 1919, 2064, 2186, 2225
GluI GCNGC 7 cut(s) 748, 1161, 1256, 1686, 1792, 1899, 2091
GsaI CCCAGC 2 cut(s) 616, 2293
GsuI CTGGAG 2 cut(s) 192, 1112
HaeIII GGCC 4 cut(s) 102, 747, 1409, 1454
HapII CCGG 4 cut(s) 103, 249, 648, 1753
Hin1II CATG 9 cut(s) 59, 509, 629, 685, 1345, 1732, 1949, 2224, 2534
HincII GTYRAC 1 cut(s) 1975
HindII GTYRAC 1 cut(s) 1975
HindIII AAGCTT 3 cut(s) 1000, 1111, 2409
HpaII CCGG 4 cut(s) 103, 249, 648, 1753
HphI GGTGA 8 cut(s) 146, 161, 266, 433, 1163, 1964, 1970, 2482
Hpy166II GTNNAC 9 cut(s) 22, 37, 314, 424, 1358, 1750, 1975, 2013, 2180
Hpy8I GTNNAC 9 cut(s) 22, 37, 314, 424, 1358, 1750, 1975, 2013, 2180
HpyCH4III ACNGT 5 cut(s) 1100, 1415, 1573, 2405, 2564
HpyCH4IV ACGT 2 cut(s) 39, 426
HpyF10VI GCNNNNNNNGC 3 cut(s) 197, 1800, 2069
HpyF3I CTNAG 6 cut(s) 77, 411, 1012, 1532, 1902, 2446
HpySE526I ACGT 2 cut(s) 39, 426
Hsp92II CATG 9 cut(s) 59, 509, 629, 685, 1345, 1732, 1949, 2224, 2534
LguI GCTCTTC 2 cut(s) 495, 624
LmnI GCTCC 4 cut(s) 290, 725, 1537, 2440
Lsp1109I GCAGC 6 cut(s) 1172, 1267, 1672, 1803, 1885, 2102
LweI GCATC 8 cut(s) 178, 209, 382, 1042, 1486, 1778, 2179, 2311
MaeI CTAG 7 cut(s) 195, 1400, 1448, 1919, 2064, 2186, 2225
MaeII ACGT 2 cut(s) 39, 426
MfeI CAATTG 2 cut(s) 1172, 1182
MflI RGATCY 9 cut(s) 326, 349, 644, 761, 862, 1915, 2272, 2389, 2442
MhlI GDGCHC 5 cut(s) 24, 1360, 1528, 1548, 1752
MlyI GAGTC 5 cut(s) 334, 1387, 1679, 2255, 2543
MmeI TCCRAC 1 cut(s) 1602
Mph1103I ATGCAT 2 cut(s) 1771, 2326
MroXI GAANNNNTTC 2 cut(s) 1602, 1643
MseI TTAA 4 cut(s) 1575, 2042, 2301, 2577
MslI CAYNNNNRTG 3 cut(s) 510, 1247, 1950
MspA1I CMGCKG 2 cut(s) 1258, 2093
MspI CCGG 4 cut(s) 103, 249, 648, 1753
MspR9I CCNGG 2 cut(s) 1754, 2489
MunI CAATTG 2 cut(s) 1172, 1182
Mva1269I GAATGC 4 cut(s) 65, 1391, 1771, 1793
MvaI CCWGG 1 cut(s) 2489
MwoI GCNNNNNNNGC 3 cut(s) 197, 1800, 2069
NciI CCSGG 1 cut(s) 1754
NdeI CATATG 1 cut(s) 2284
NlaIII CATG 9 cut(s) 59, 509, 629, 685, 1345, 1732, 1949, 2224, 2534
NlaIV GGNNCC 8 cut(s) 286, 646, 721, 973, 2112, 2274, 2436, 2528
NsiI ATGCAT 2 cut(s) 1771, 2326
NspI RCATGY 2 cut(s) 1949, 2224
NspV TTCGAA 1 cut(s) 1395
OliI CACNNNNGTG 1 cut(s) 1247
PaeR7I CTCGAG 2 cut(s) 1205, 2633
PciSI GCTCTTC 2 cut(s) 495, 624
PcsI WCGNNNNNNNCGW 1 cut(s) 1791
PctI GAATGC 4 cut(s) 65, 1391, 1771, 1793
PdmI GAANNNNTTC 2 cut(s) 1602, 1643
PfeI GAWTC 7 cut(s) 278, 1073, 1178, 1307, 1430, 1853, 2123
PflFI GACNNNGTC 1 cut(s) 1264
PkrI GCNGC 7 cut(s) 749, 1162, 1257, 1687, 1793, 1900, 2092
PleI GAGTC 5 cut(s) 334, 1386, 1678, 2254, 2543
PpsI GAGTC 5 cut(s) 334, 1386, 1678, 2254, 2543
Psp124BI GAGCTC 1 cut(s) 1548
Psp1406I AACGTT 1 cut(s) 39
Psp6I CCWGG 1 cut(s) 2487
PspFI CCCAGC 2 cut(s) 612, 2289
PspGI CCWGG 1 cut(s) 2487
PspN4I GGNNCC 8 cut(s) 286, 646, 721, 973, 2112, 2274, 2436, 2528
PspPI GGNCC 3 cut(s) 842, 1453, 2485
PspXI VCTCGAGB 1 cut(s) 1205
PstNI CAGNNNCTG 2 cut(s) 1856, 1937
PsuI RGATCY 9 cut(s) 326, 349, 644, 761, 862, 1915, 2272, 2389, 2442
PsyI GACNNNGTC 1 cut(s) 1264
PvuII CAGCTG 2 cut(s) 1258, 2093
RsaI GTAC 6 cut(s) 53, 798, 1097, 1652, 1860, 2255
RsaNI GTAC 6 cut(s) 52, 797, 1096, 1651, 1859, 2254
RseI CAYNNNNRTG 3 cut(s) 510, 1247, 1950
SacI GAGCTC 1 cut(s) 1548
SapI GCTCTTC 2 cut(s) 495, 624
SaqAI TTAA 4 cut(s) 1575, 2042, 2301, 2577
SatI GCNGC 7 cut(s) 748, 1161, 1256, 1686, 1792, 1899, 2091
Sau96I GGNCC 3 cut(s) 842, 1453, 2485
SchI GAGTC 5 cut(s) 334, 1387, 1679, 2255, 2543
ScrFI CCNGG 2 cut(s) 1754, 2489
SduI GDGCHC 5 cut(s) 24, 1360, 1528, 1548, 1752
SfaNI GCATC 8 cut(s) 178, 209, 382, 1042, 1486, 1778, 2179, 2311
Sfr274I CTCGAG 2 cut(s) 1205, 2633
SfuI TTCGAA 1 cut(s) 1395
SinI GGWCC 2 cut(s) 842, 2485
SlaI CTCGAG 2 cut(s) 1205, 2633
SmiMI CAYNNNNRTG 3 cut(s) 510, 1247, 1950
SmlI CTYRAG 7 cut(s) 345, 777, 852, 1205, 1295, 1541, 2633
SmoI CTYRAG 7 cut(s) 345, 777, 852, 1205, 1295, 1541, 2633
SsiI CCGC 4 cut(s) 132, 748, 845, 2214
SspI AATATT 1 cut(s) 2347
SspMI CTAG 7 cut(s) 195, 1400, 1448, 1919, 2064, 2186, 2225
SstI GAGCTC 1 cut(s) 1548
StyD4I CCNGG 2 cut(s) 1752, 2487
StyI CCWWGG 1 cut(s) 1590
TaaI ACNGT 5 cut(s) 1100, 1415, 1573, 2405, 2564
TaiI ACGT 2 cut(s) 42, 429
TaqI TCGA 4 cut(s) 1206, 1395, 2552, 2634
TaqII GACCGA 1 cut(s) 384
TatI WGTACW 3 cut(s) 1650, 1858, 2253
TauI GCSGC 1 cut(s) 750
TfiI GAWTC 7 cut(s) 278, 1073, 1178, 1307, 1430, 1853, 2123
Tru1I TTAA 4 cut(s) 1575, 2042, 2301, 2577
Tru9I TTAA 4 cut(s) 1575, 2042, 2301, 2577
TscAI CASTG 6 cut(s) 70, 909, 982, 1084, 1254, 2619
TseI GCWGC 6 cut(s) 1160, 1255, 1685, 1791, 1898, 2090
TspGWI ACGGA 1 cut(s) 39
TspRI CASTG 6 cut(s) 70, 909, 982, 1084, 1254, 2619
Tth111I GACNNNGTC 1 cut(s) 1264
VneI GTGCAC 3 cut(s) 20, 1356, 1748
VpaK11BI GGWCC 2 cut(s) 842, 2485
XapI RAATTY 1 cut(s) 2507
XbaI TCTAGA 2 cut(s) 1918, 2185
XceI RCATGY 2 cut(s) 1949, 2224
XcmI CCANNNNNNNNNTGG 2 cut(s) 1084, 1831
XhoI CTCGAG 2 cut(s) 1205, 2633
XmnI GAANNNNTTC 2 cut(s) 1602, 1643
XspI CTAG 7 cut(s) 195, 1400, 1448, 1919, 2064, 2186, 2225
Zsp2I ATGCAT 2 cut(s) 1771, 2326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.