Rorug06G0239800

Peter Pan-like protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
38232794 .. 38234477
1684 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0239800.1

Sequence Viewer

Length: 1365 bp
ATGGCAAAAGATATGGATAACAATCTGCCCCCTTCTGTAGAGTCTTCAACCAATGGATCCGAGGAGCACAAGTCCAAGGATCTCTCAGTGAGTGGCGATTCGATTCGTCACCGTTTTCTGGAATTTTTTGCTTCCTGTGGTCACAAGGTTCTTCCTAGTGCTTCTCTAGTCCCAGATGATCCCACAGTTCTACTAACAATTGCTGGAATGCTTCAGTTCAAGCCTATATTCCTTGGCCAGGTTCAAAGACCAGTACCTCGTGCAACAATTTCTCAGAGTTTCGGAGATTACTTCAAGAAGGAAGCAATCCAATGGGCATGGGAGCTTTCGACTGAAGAGTTTGGAATACCAGCTGACAGGTTGTGGGTTAGTGTCTTCGAAGATGACGATGAAGCTTTCGAAATCTGGCATCATGAGGTTGGTGTTCCTGTGGAGCATATCCAGAGAATGGGTGAAGAAGACAACTTTTGGACTAGTGGAGTTACCGGTCCATGCGGTCCATGCTCCGAGATTTATTATGATTTCCATCCTGAGAGGGGATATTTAGATGCAGACCTCAATGATGATACCAGATTTATTGAGTTTTACAATTTGGTTTTTATGGAGTTCAACAAAAAGGTTGATGGTTCACTTGAGCCCTTGAAACAGAAGAACATAGATACCGGACTTGGCCTGGAGCGTATGGCTCGAATCCTTCAGAAGGTCTCGAACAACTATGAAACTGACTTGATCTATCCAATTATAGAGAAGGTCTCAGAATTAGCAAAGGTATCATATAGCCAAGCAAATGAGCTGTTCAAACTGAATTTTAAGATTGTCGGAGATCATCTGCGTGCAATTGTGTATCTCATATCAGATGGCGTTGTTCCATCAAATACCAAAAGAGGGTATGTCCTTCGAATGCTTATCAGAAGGGCGGTTCGTGCAGGCAGGTCGCTTGGTCTAAAGGGAGATTGTCAGGGAAACCTTGGAGAAACAGTTCTACCGGTCATTGCAGGGAAAGTAATTGAGATGAGCAGCCTTATTGATCCGGATGTGAAAGATAAAGCAGGCCGAATTCTTGAGGTGTTGCAAAGGGAAGAACTTGTGTTTGTGAAGACATTGTGCAAAGGAGAGAAAAAGCTTCACCAAATGCTAGATGAGGCATTATCGAGTGCAGAGAAAAGTGGGAGTATCCCTTGCTTGTCAGGCAAATATGCATTTGTGTTGAAAGATACATATGGATTTCCTGTTGAACAAACAAGAGAAGTGGCTAAAGAACATGGTGTAGGTATAGATATGGATGGCTTTGATACTGAAATGGAAAACCAAAGGCGTCAGTCTAAGACTGCACACAAAACTGTTGAAGTTGTCGGATGCACTTGA

Protein Analysis

454

Amino Acids

51.01

Weight (kDa)

5.22

Isoelectric Point (pI)

37.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA-synt_2c PF01411 35 - 92 1.6e-18 tRNA synthetases class II (A)
tRNA-synt_2c PF01411 93 - 449 1.7e-114 tRNA synthetases class II (A)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 921
AccB7I CCANNNNNTGG 1 cut(s) 448
AccIII TCCGGA 1 cut(s) 1030
AciI CCGC 2 cut(s) 495, 917
AclWI GGATC 5 cut(s) 51, 64, 87, 173, 1022
AcoI YGGCCR 1 cut(s) 235
AcsI RAATTY 3 cut(s) 122, 805, 1056
AcuI CTGAAG 3 cut(s) 197, 354, 680
AcyI GRCGYC 1 cut(s) 1315
AfaI GTAC 1 cut(s) 255
AfiI CCNNNNNNNGG 6 cut(s) 118, 238, 448, 536, 700, 885
AgeI ACCGGT 2 cut(s) 485, 985
AhlI ACTAGT 1 cut(s) 473
AjnI CCWGG 2 cut(s) 237, 672
AloI GAACNNNNNNTCC 2 cut(s) 963, 995
AluBI AGCT 5 cut(s) 325, 353, 395, 793, 1123
AluI AGCT 5 cut(s) 325, 353, 395, 793, 1123
Alw21I GWGCWC 1 cut(s) 69
Alw26I GTCTC 2 cut(s) 709, 757
AlwI GGATC 5 cut(s) 51, 64, 87, 173, 1022
Aor13HI TCCGGA 1 cut(s) 1030
AoxI GGCC 3 cut(s) 235, 670, 1051
ApeKI GCWGC 1 cut(s) 1017
ApoI RAATTY 3 cut(s) 122, 805, 1056
AsiGI ACCGGT 2 cut(s) 485, 985
Asp700I GAANNNNTTC 1 cut(s) 978
AspS9I GGNCC 2 cut(s) 488, 497
AsuHPI GGTGA 3 cut(s) 101, 464, 1118
AsuII TTCGAA 3 cut(s) 378, 399, 898
AvaII GGWCC 2 cut(s) 488, 497
BalI TGGCCA 1 cut(s) 237
BamHI GGATCC 1 cut(s) 56
BanII GRGCYC 1 cut(s) 639
BauI CACGAG 1 cut(s) 258
BbsI GAAGAC 4 cut(s) 36, 367, 465, 1103
Bbv12I GWGCWC 1 cut(s) 69
BbvI GCAGC 1 cut(s) 1029
BccI CCATC 5 cut(s) 534, 617, 851, 877, 1277
BcgI CGANNNNNNTGC 2 cut(s) 915, 949
BciT130I CCWGG 2 cut(s) 239, 674
BciVI GTATCC 1 cut(s) 1184
BcoDI GTCTC 2 cut(s) 709, 757
BcuI ACTAGT 1 cut(s) 473
BfaI CTAG 4 cut(s) 156, 167, 474, 1136
BfmI CTRYAG 1 cut(s) 36
BfuAI ACCTGC 1 cut(s) 921
BfuI GTATCC 1 cut(s) 1184
BisI GCNGC 1 cut(s) 1018
BlsI GCNGC 1 cut(s) 1019
Bme1390I CCNGG 2 cut(s) 239, 674
Bme18I GGWCC 2 cut(s) 488, 497
BmgT120I GGNCC 2 cut(s) 488, 497
BmiI GGNNCC 1 cut(s) 58
BmrFI CCNGG 2 cut(s) 239, 674
BmsI GCATC 3 cut(s) 418, 538, 1346
BpiI GAAGAC 4 cut(s) 36, 367, 465, 1103
BplI GAGNNNNNCTC 2 cut(s) 737, 769
BpmI CTGGAG 1 cut(s) 695
Bpu14I TTCGAA 3 cut(s) 378, 399, 898
BpuEI CTTGAG 2 cut(s) 653, 1082
BsaBI GATNNNNATC 2 cut(s) 21, 525
BsaHI GRCGYC 1 cut(s) 1315
BsaI GGTCTC 2 cut(s) 709, 757
BsaJI CCNNGG 4 cut(s) 60, 75, 232, 967
BsaWI WCCGGW 4 cut(s) 485, 662, 985, 1030
BsaXI ACNNNNNCTCC 4 cut(s) 56, 86, 963, 993
Bsc4I CCNNNNNNNGG 6 cut(s) 118, 238, 448, 536, 700, 885
Bse118I RCCGGY 2 cut(s) 485, 985
Bse1I ACTGG 1 cut(s) 251
Bse3DI GCAATG 1 cut(s) 990
Bse8I GATNNNNATC 2 cut(s) 21, 525
BseAI TCCGGA 1 cut(s) 1030
BseBI CCWGG 2 cut(s) 239, 674
BseDI CCNNGG 4 cut(s) 60, 75, 232, 967
BseGI GGATG 4 cut(s) 526, 1039, 1288, 1361
BseJI GATNNNNATC 2 cut(s) 21, 525
BseLI CCNNNNNNNGG 6 cut(s) 118, 238, 448, 536, 700, 885
BseMI GCAATG 1 cut(s) 990
BseMII CTCAG 4 cut(s) 99, 287, 522, 768
BseNI ACTGG 1 cut(s) 251
BseRI GAGGAG 1 cut(s) 77
BseXI GCAGC 1 cut(s) 1029
BsgI GTGCAG 3 cut(s) 945, 1176, 1314
BshFI GGCC 3 cut(s) 237, 672, 1053
BshTI ACCGGT 2 cut(s) 485, 985
BsiHKAI GWGCWC 1 cut(s) 69
BsiSI CCGG 4 cut(s) 486, 663, 986, 1031
BslFI GGGAC 1 cut(s) 155
BslI CCNNNNNNNGG 6 cut(s) 118, 238, 448, 536, 700, 885
BsmAI GTCTC 2 cut(s) 709, 757
BsmFI GGGAC 1 cut(s) 155
BsmI GAATGC 2 cut(s) 213, 906
BsnI GGCC 3 cut(s) 237, 672, 1053
Bso31I GGTCTC 2 cut(s) 709, 757
Bsp119I TTCGAA 3 cut(s) 378, 399, 898
Bsp1286I GDGCHC 2 cut(s) 69, 639
Bsp13I TCCGGA 1 cut(s) 1030
Bsp143I GATC 6 cut(s) 56, 79, 178, 729, 823, 1027
BspACI CCGC 2 cut(s) 495, 917
BspANI GGCC 3 cut(s) 237, 672, 1053
BspCNI CTCAG 4 cut(s) 98, 286, 523, 767
BspEI TCCGGA 1 cut(s) 1030
BspHI TCATGA 1 cut(s) 412
BspLI GGNNCC 1 cut(s) 58
BspMI ACCTGC 1 cut(s) 921
BspPI GGATC 5 cut(s) 51, 64, 87, 173, 1022
BspT104I TTCGAA 3 cut(s) 378, 399, 898
BspTNI GGTCTC 2 cut(s) 709, 757
BsrDI GCAATG 1 cut(s) 990
BsrFI RCCGGY 2 cut(s) 485, 985
BsrI ACTGG 1 cut(s) 251
BssAI RCCGGY 2 cut(s) 485, 985
BssECI CCNNGG 4 cut(s) 60, 75, 232, 967
BssMI GATC 6 cut(s) 56, 79, 178, 729, 823, 1027
BssNI GRCGYC 1 cut(s) 1315
BssSI CACGAG 1 cut(s) 258
BssT1I CCWWGG 3 cut(s) 75, 232, 967
Bst2BI CACGAG 1 cut(s) 258
Bst2UI CCWGG 2 cut(s) 239, 674
Bst4CI ACNGT 4 cut(s) 113, 187, 979, 1342
Bst6I CTCTTC 1 cut(s) 330
BstACI GRCGYC 1 cut(s) 1315
BstBI TTCGAA 3 cut(s) 378, 399, 898
BstC8I GCNNGC 3 cut(s) 834, 928, 1051
BstDEI CTNAG 5 cut(s) 85, 273, 531, 754, 1323
BstENI CCTNNNNNAGG 2 cut(s) 236, 698
BstF5I GGATG 4 cut(s) 526, 1039, 1288, 1361
BstKTI GATC 6 cut(s) 59, 82, 181, 732, 826, 1030
BstMAI GTCTC 2 cut(s) 709, 757
BstMBI GATC 6 cut(s) 56, 79, 178, 729, 823, 1027
BstMWI GCNNNNNNNGC 3 cut(s) 501, 923, 1188
BstNI CCWGG 2 cut(s) 239, 674
BstSCI CCNGG 2 cut(s) 237, 672
BstSFI CTRYAG 1 cut(s) 36
BstV1I GCAGC 1 cut(s) 1029
BstV2I GAAGAC 4 cut(s) 36, 367, 465, 1103
BstX2I RGATCY 2 cut(s) 56, 79
BstYI RGATCY 2 cut(s) 56, 79
BsuI GTATCC 1 cut(s) 1184
BsuRI GGCC 3 cut(s) 237, 672, 1053
BtsCI GGATG 4 cut(s) 526, 1039, 1288, 1361
BtsIMutI CAGTG 1 cut(s) 93
BveI ACCTGC 1 cut(s) 921
Cac8I GCNNGC 3 cut(s) 834, 928, 1051
CciI TCATGA 1 cut(s) 412
Cfr10I RCCGGY 2 cut(s) 485, 985
Cfr13I GGNCC 2 cut(s) 488, 497
CseI GACGC 1 cut(s) 1304
Csp6I GTAC 1 cut(s) 254
CspAI ACCGGT 2 cut(s) 485, 985
CspCI CAANNNNNGTGG 2 cut(s) 1230, 1265
CviAII CATG 5 cut(s) 318, 413, 492, 501, 1262
CviQI GTAC 1 cut(s) 254
DdeI CTNAG 5 cut(s) 85, 273, 531, 754, 1323
DpnI GATC 6 cut(s) 58, 81, 180, 731, 825, 1029
DpnII GATC 6 cut(s) 56, 79, 178, 729, 823, 1027
EaeI YGGCCR 1 cut(s) 235
Eam1104I CTCTTC 1 cut(s) 330
EarI CTCTTC 1 cut(s) 330
Eco130I CCWWGG 3 cut(s) 75, 232, 967
Eco24I GRGCYC 1 cut(s) 639
Eco31I GGTCTC 2 cut(s) 709, 757
Eco47I GGWCC 2 cut(s) 488, 497
Eco57I CTGAAG 3 cut(s) 197, 354, 680
EcoNI CCTNNNNNAGG 2 cut(s) 236, 698
EcoRI GAATTC 1 cut(s) 1056
EcoRII CCWGG 2 cut(s) 237, 672
EcoT14I CCWWGG 3 cut(s) 75, 232, 967
EcoT22I ATGCAT 1 cut(s) 1201
EcoT38I GRGCYC 1 cut(s) 639
ErhI CCWWGG 3 cut(s) 75, 232, 967
FaeI CATG 5 cut(s) 321, 416, 495, 504, 1265
FaqI GGGAC 1 cut(s) 155
FatI CATG 5 cut(s) 317, 412, 491, 500, 1261
FauNDI CATATG 1 cut(s) 1219
Fnu4HI GCNGC 1 cut(s) 1018
FokI GGATG 3 cut(s) 513, 1046, 1295
FriOI GRGCYC 1 cut(s) 639
Fsp4HI GCNGC 1 cut(s) 1018
FspBI CTAG 4 cut(s) 156, 167, 474, 1136
GluI GCNGC 1 cut(s) 1018
GsuI CTGGAG 1 cut(s) 695
HaeIII GGCC 3 cut(s) 237, 672, 1053
HapII CCGG 4 cut(s) 486, 663, 986, 1031
HgaI GACGC 1 cut(s) 1304
Hin1I GRCGYC 1 cut(s) 1315
Hin1II CATG 5 cut(s) 321, 416, 495, 504, 1265
HindIII AAGCTT 2 cut(s) 393, 1121
HinfI GANTC 4 cut(s) 41, 98, 103, 690
HpaII CCGG 4 cut(s) 486, 663, 986, 1031
HphI GGTGA 3 cut(s) 101, 464, 1118
Hpy166II GTNNAC 1 cut(s) 629
Hpy188III TCNNGA 8 cut(s) 119, 295, 413, 442, 530, 706, 1031, 1061
Hpy8I GTNNAC 1 cut(s) 629
HpyAV CCTTC 7 cut(s) 42, 292, 694, 704, 742, 905, 906
HpyCH4III ACNGT 4 cut(s) 113, 187, 979, 1342
HpyF10VI GCNNNNNNNGC 3 cut(s) 501, 923, 1188
HpyF3I CTNAG 5 cut(s) 85, 273, 531, 754, 1323
Hsp92I GRCGYC 1 cut(s) 1315
Hsp92II CATG 5 cut(s) 321, 416, 495, 504, 1265
Kpn2I TCCGGA 1 cut(s) 1030
Kzo9I GATC 6 cut(s) 56, 79, 178, 729, 823, 1027
LmnI GCTCC 5 cut(s) 64, 322, 433, 509, 676
Lsp1109I GCAGC 1 cut(s) 1029
LweI GCATC 3 cut(s) 418, 538, 1346
MaeI CTAG 4 cut(s) 156, 167, 474, 1136
MaeIII GTNAC 3 cut(s) 107, 140, 481
MalI GATC 6 cut(s) 58, 81, 180, 731, 825, 1029
MboI GATC 6 cut(s) 56, 79, 178, 729, 823, 1027
MfeI CAATTG 2 cut(s) 198, 837
MflI RGATCY 2 cut(s) 56, 79
MhlI GDGCHC 2 cut(s) 69, 639
MlsI TGGCCA 1 cut(s) 237
MluNI TGGCCA 1 cut(s) 237
MlyI GAGTC 1 cut(s) 50
MmeI TCCRAC 2 cut(s) 799, 1333
MnlI CCTC 8 cut(s) 55, 267, 409, 528, 566, 878, 1057, 1135
Mox20I TGGCCA 1 cut(s) 237
Mph1103I ATGCAT 1 cut(s) 1201
MroI TCCGGA 1 cut(s) 1030
MroXI GAANNNNTTC 1 cut(s) 978
MscI TGGCCA 1 cut(s) 237
MseI TTAA 1 cut(s) 810
MslI CAYNNNNRTG 1 cut(s) 831
Msp20I TGGCCA 1 cut(s) 237
MspA1I CMGCKG 1 cut(s) 353
MspI CCGG 4 cut(s) 486, 663, 986, 1031
MspR9I CCNGG 2 cut(s) 239, 674
MunI CAATTG 2 cut(s) 198, 837
Mva1269I GAATGC 2 cut(s) 213, 906
MvaI CCWGG 2 cut(s) 239, 674
MwoI GCNNNNNNNGC 3 cut(s) 501, 923, 1188
NdeI CATATG 1 cut(s) 1219
NdeII GATC 6 cut(s) 56, 79, 178, 729, 823, 1027
NlaIII CATG 5 cut(s) 321, 416, 495, 504, 1265
NlaIV GGNNCC 1 cut(s) 58
NmuCI GTSAC 2 cut(s) 107, 140
NsiI ATGCAT 1 cut(s) 1201
NspV TTCGAA 3 cut(s) 378, 399, 898
PagI TCATGA 1 cut(s) 412
PcsI WCGNNNNNNNCGW 1 cut(s) 384
PctI GAATGC 2 cut(s) 213, 906
PdmI GAANNNNTTC 1 cut(s) 978
PfeI GAWTC 3 cut(s) 98, 103, 690
PflMI CCANNNNNTGG 1 cut(s) 448
PinAI ACCGGT 2 cut(s) 485, 985
PkrI GCNGC 1 cut(s) 1019
PleI GAGTC 1 cut(s) 49
PpsI GAGTC 1 cut(s) 49
Psp6I CCWGG 2 cut(s) 237, 672
PspGI CCWGG 2 cut(s) 237, 672
PspN4I GGNNCC 1 cut(s) 58
PspPI GGNCC 2 cut(s) 488, 497
PsuI RGATCY 2 cut(s) 56, 79
PvuII CAGCTG 1 cut(s) 353
RsaI GTAC 1 cut(s) 255
RsaNI GTAC 1 cut(s) 254
RseI CAYNNNNRTG 1 cut(s) 831
SaqAI TTAA 1 cut(s) 810
SatI GCNGC 1 cut(s) 1018
Sau3AI GATC 6 cut(s) 56, 79, 178, 729, 823, 1027
Sau96I GGNCC 2 cut(s) 488, 497
SchI GAGTC 1 cut(s) 50
ScrFI CCNGG 2 cut(s) 239, 674
SduI GDGCHC 2 cut(s) 69, 639
SfaNI GCATC 3 cut(s) 418, 538, 1346
SfcI CTRYAG 1 cut(s) 36
SfuI TTCGAA 3 cut(s) 378, 399, 898
SinI GGWCC 2 cut(s) 488, 497
SmiMI CAYNNNNRTG 1 cut(s) 831
SmlI CTYRAG 2 cut(s) 632, 1061
SmoI CTYRAG 2 cut(s) 632, 1061
SpeI ACTAGT 1 cut(s) 473
SsiI CCGC 2 cut(s) 495, 917
SspMI CTAG 4 cut(s) 156, 167, 474, 1136
StyD4I CCNGG 2 cut(s) 237, 672
StyI CCWWGG 3 cut(s) 75, 232, 967
TaaI ACNGT 4 cut(s) 113, 187, 979, 1342
TaqI TCGA 8 cut(s) 101, 329, 378, 399, 688, 707, 898, 1151
TfiI GAWTC 3 cut(s) 98, 103, 690
Tru1I TTAA 1 cut(s) 810
Tru9I TTAA 1 cut(s) 810
TscAI CASTG 1 cut(s) 93
TseFI GTSAC 2 cut(s) 107, 140
TseI GCWGC 1 cut(s) 1017
Tsp45I GTSAC 2 cut(s) 107, 140
TspDTI ATGAA 2 cut(s) 405, 732
TspRI CASTG 1 cut(s) 93
Van91I CCANNNNNTGG 1 cut(s) 448
VpaK11BI GGWCC 2 cut(s) 488, 497
XagI CCTNNNNNAGG 2 cut(s) 236, 698
XapI RAATTY 3 cut(s) 122, 805, 1056
XmnI GAANNNNTTC 1 cut(s) 978
XspI CTAG 4 cut(s) 156, 167, 474, 1136
Zsp2I ATGCAT 1 cut(s) 1201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.