TLC domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G21790 |
| fragaria_vesca | FvH4_2g26990 |
| malus_domestica | MD08G1162300.v1.1 MD15G1347700.v1.1 |
| prunus_persica | Prupe.1G495500_v2.0.a1 |
| pyrus_communis | pycom15g31170 |
| rosa_chinensis | RchiOBHm_Chr6g0295871 |
| rosa_laevigata | RLG00000011761 |
| rosa_multiflora | Rmu_ssc0000277.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00172100 |
| rosa_rugosa | Rorug06G0254900 |
| rosa_samantha | Rh6BG376200 Rh6CG382300 |
| rosa_wichuraiana | Rw6G032120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 60 |
| AciI | CCGC | 1 cut(s) | 190 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AgsI | TTSAA | 1 cut(s) | 116 |
| AjnI | CCWGG | 1 cut(s) | 154 |
| AluBI | AGCT | 3 cut(s) | 108, 140, 167 |
| AluI | AGCT | 3 cut(s) | 108, 140, 167 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 1 cut(s) | 140 |
| AspS9I | GGNCC | 1 cut(s) | 152 |
| AvaII | GGWCC | 1 cut(s) | 152 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbvI | GCAGC | 1 cut(s) | 127 |
| BccI | CCATC | 1 cut(s) | 202 |
| BciT130I | CCWGG | 1 cut(s) | 156 |
| BclI | TGATCA | 1 cut(s) | 130 |
| BfuAI | ACCTGC | 1 cut(s) | 60 |
| BisI | GCNGC | 1 cut(s) | 141 |
| BlsI | GCNGC | 1 cut(s) | 142 |
| Bme1390I | CCNGG | 1 cut(s) | 156 |
| Bme18I | GGWCC | 1 cut(s) | 152 |
| BmgT120I | GGNCC | 1 cut(s) | 152 |
| BmrFI | CCNGG | 1 cut(s) | 156 |
| BoxI | GACNNNNGTC | 1 cut(s) | 26 |
| BpmI | CTGGAG | 1 cut(s) | 84 |
| BpuEI | CTTGAG | 1 cut(s) | 52 |
| Bse3DI | GCAATG | 1 cut(s) | 199 |
| BseBI | CCWGG | 1 cut(s) | 156 |
| BseGI | GGATG | 1 cut(s) | 94 |
| BseMI | GCAATG | 1 cut(s) | 199 |
| BseXI | GCAGC | 1 cut(s) | 127 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 1 cut(s) | 130 |
| BspACI | CCGC | 1 cut(s) | 190 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspHI | TCATGA | 1 cut(s) | 133 |
| BspMI | ACCTGC | 1 cut(s) | 60 |
| BsrDI | GCAATG | 1 cut(s) | 199 |
| BssMI | GATC | 1 cut(s) | 130 |
| Bst2UI | CCWGG | 1 cut(s) | 156 |
| BstC8I | GCNNGC | 1 cut(s) | 57 |
| BstDEI | CTNAG | 1 cut(s) | 25 |
| BstF5I | GGATG | 1 cut(s) | 94 |
| BstKTI | GATC | 1 cut(s) | 133 |
| BstMBI | GATC | 1 cut(s) | 130 |
| BstNI | CCWGG | 1 cut(s) | 156 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 26 |
| BstSCI | CCNGG | 1 cut(s) | 154 |
| BstV1I | GCAGC | 1 cut(s) | 127 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 1 cut(s) | 94 |
| BveI | ACCTGC | 1 cut(s) | 60 |
| Cac8I | GCNNGC | 1 cut(s) | 57 |
| CciI | TCATGA | 1 cut(s) | 133 |
| Cfr13I | GGNCC | 1 cut(s) | 152 |
| CviAII | CATG | 1 cut(s) | 134 |
| CviJI | RGCY | 5 cut(s) | 5, 108, 140, 159, 167 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 108, 140, 159, 167 |
| DdeI | CTNAG | 1 cut(s) | 25 |
| DpnI | GATC | 1 cut(s) | 132 |
| DpnII | GATC | 1 cut(s) | 130 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eco47I | GGWCC | 1 cut(s) | 152 |
| EcoRII | CCWGG | 1 cut(s) | 154 |
| FaeI | CATG | 1 cut(s) | 137 |
| FaiI | YATR | 5 cut(s) | 8, 42, 120, 135, 206 |
| FatI | CATG | 1 cut(s) | 133 |
| FbaI | TGATCA | 1 cut(s) | 130 |
| Fnu4HI | GCNGC | 1 cut(s) | 141 |
| FokI | GGATG | 1 cut(s) | 81 |
| Fsp4HI | GCNGC | 1 cut(s) | 141 |
| GluI | GCNGC | 1 cut(s) | 141 |
| GsuI | CTGGAG | 1 cut(s) | 84 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| Hin1II | CATG | 1 cut(s) | 137 |
| HincII | GTYRAC | 1 cut(s) | 178 |
| HindII | GTYRAC | 1 cut(s) | 178 |
| HinfI | GANTC | 1 cut(s) | 44 |
| Hpy166II | GTNNAC | 1 cut(s) | 178 |
| Hpy188III | TCNNGA | 4 cut(s) | 31, 101, 113, 134 |
| Hpy8I | GTNNAC | 1 cut(s) | 178 |
| HpyF3I | CTNAG | 1 cut(s) | 25 |
| Hsp92II | CATG | 1 cut(s) | 137 |
| Ksp22I | TGATCA | 1 cut(s) | 130 |
| Kzo9I | GATC | 1 cut(s) | 130 |
| LpnPI | CCDG | 5 cut(s) | 41, 65, 114, 141, 168 |
| Lsp1109I | GCAGC | 1 cut(s) | 127 |
| MaeIII | GTNAC | 2 cut(s) | 79, 86 |
| MalI | GATC | 1 cut(s) | 132 |
| MboI | GATC | 1 cut(s) | 130 |
| MboII | GAAGA | 1 cut(s) | 82 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 38 |
| MnlI | CCTC | 1 cut(s) | 108 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 1 cut(s) | 18 |
| MslI | CAYNNNNRTG | 1 cut(s) | 203 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspR9I | CCNGG | 1 cut(s) | 156 |
| MvaI | CCWGG | 1 cut(s) | 156 |
| NdeII | GATC | 1 cut(s) | 130 |
| NlaIII | CATG | 1 cut(s) | 137 |
| PagI | TCATGA | 1 cut(s) | 133 |
| PkrI | GCNGC | 1 cut(s) | 142 |
| PleI | GAGTC | 1 cut(s) | 38 |
| PpsI | GAGTC | 1 cut(s) | 38 |
| PshAI | GACNNNNGTC | 1 cut(s) | 26 |
| Psp6I | CCWGG | 1 cut(s) | 154 |
| PspGI | CCWGG | 1 cut(s) | 154 |
| PspPI | GGNCC | 1 cut(s) | 152 |
| RseI | CAYNNNNRTG | 1 cut(s) | 203 |
| SaqAI | TTAA | 1 cut(s) | 18 |
| SatI | GCNGC | 1 cut(s) | 141 |
| Sau3AI | GATC | 1 cut(s) | 130 |
| Sau96I | GGNCC | 1 cut(s) | 152 |
| SchI | GAGTC | 1 cut(s) | 38 |
| ScrFI | CCNGG | 1 cut(s) | 156 |
| SetI | ASST | 5 cut(s) | 26, 54, 110, 142, 169 |
| SinI | GGWCC | 1 cut(s) | 152 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 203 |
| SmlI | CTYRAG | 1 cut(s) | 31 |
| SmoI | CTYRAG | 1 cut(s) | 31 |
| SsiI | CCGC | 1 cut(s) | 190 |
| StyD4I | CCNGG | 1 cut(s) | 154 |
| Tru1I | TTAA | 1 cut(s) | 18 |
| Tru9I | TTAA | 1 cut(s) | 18 |
| TseI | GCWGC | 1 cut(s) | 140 |
| TspDTI | ATGAA | 1 cut(s) | 150 |
| VpaK11BI | GGWCC | 1 cut(s) | 152 |