Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0011530

Physical Location & Seq

Genomic Coordinates Reverse (-)

43962098 .. 43967625

Gene Structure 5528 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0289300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

ATGCGTACTCCGATTCTGCTTCTTCTTCCTTTTGTTCTTCTCCAGCTCAACTTGGTTTTCTATTGCTCAGGGCAATTGTCACTAACTCCTCAGATTTCAAATCGGCCATTAACTTTGAGAGGTTTCGCACTGGAGCGCGCAAGGTCAATTTTGATGAGTTTTCCATTTGCTTCTTCAAAACCATCGAAAACACGAATGACCAAGCCTTCTTCAGCATCCCTTGCACCTGCACCTGCACCTTCTCCAGTTCATCTAGCTCCCAGCAGTTTGCCTTCACCACCACTCCGTCATCGTCATCATCATCATCGTGGGAAAGGAAGACCCCATGCTGTTGCTCCTGCCCCGTCAAAAGACCCAGGTTGTGATCAACTTTGTGTGGAGCCACTTACTGCATCTCCATTTGGTTCACCTTGTGGTTGTGTATTTCCCATGAAAGTCAGACTTTTACTGGATATAGCTCCTTATTCTATTTTTCCAGTAATGAGTGAGTTGGAGATTGAGGTTGCTGAGGGCACGTATTTGGCACAAAGCCAAGTAATAATAATGGGTGCAAGTGCTGATAGTCAAAATCAAGGAAGAACAGTAGTGGATATTAACTTGGTTCCTTTAGGAGAGAAGTTTGATAATACCACTGCGATACTGACATATGACAGATTCAAGCATAAGAAAGTGCCTCTCAATCTAACTCTTTTTGGCAATTATGAAGTGTTGTACATTAGTTACCCAGGGATACCTTCTTCACCACCATATTTGAAGGGGAATGGACCAACTGGAAGTCCTCAAAACCTCCCTATCACTGCAAAGTTTCCCAGAAAGAACCAGAGAATGAATATAAGAACCATTGCCATTATTGCCCTCTCTGCCTTTGTACTCCTATTGGTTATTCTTGGAGCAATCTTGGTGTTCATAAAATGGAGGAAAGTTGGAAGACCATCTAGTGCTGTCGGTCCTGCACGTGAATCATCTATTCATAAAAGATCTGGCTTTGGGTCTATGATATCAAGTAGCATTCCAAGCTCCACTTCAGTATCCCTAATGTCCACCATGGCTACCAGTATTCTCTCTGTTAAAACATTCCCACGTTCTGAGATTGAGAAAGCAACAAATAAGTTCAGTTCTCAAAGGGTTCTAGGAGAAGGAGGATTTGGACGTGTTTACCATGGAATTATGGAGGATGGAAGTGAAGTTGCAGTCAAAGTGCTTACAAGGGATAACAACCAAAATGGAGACCGTGAATTCATTGCAGAAGTTGAGATGTTAAGCCGATTACATCACCGTAATCTTGTGAAACTGATTGGTATATGTATTGAAGGGCACGCACGCAGCTTGGTGTATGAGCTTATTCGCAATGGCAGTGTTGAGTCTCATTTGCATGGTGTTGACAAGAAAAAGGGCCCTCTTGACTGGGACGCACGGATGAAGATTGCCCTTGGGGCAGCAAGAGGATTAGCCTATCTTCATGAAGATTCTAATCCCCGTGTTATTCACCGAGATTTTAAGGCTAGTAATGTTTTGCTGGAAGATGACTTCACTCCCAAGGTTTCTGATTTTGGGTTGGCTAGGGAAGCAACTGAAGGAAGTCATCACATCTCTACAAGGGTCATGGGAACTTTCGGGTATGTTGCCCCAGAATATGCGATGACAGGGCATTTACTCGTCAAGAGCGATGTTTATAGTTATGGAGTTGTGCTGCTGGAACTTCTCTCTGGAAGGAAACCTGTTGACATGTCCCACCCTCAGGGGCAGGAGAATTTGGTCACGTGGGCAAGACCGCTGCTAACCAGCAGAGAAGGTTTGCAGCAGTTGGTGGATCCTGCCTTAGCCGGAACTTATGACTTCAATGACATGGCTAAAGTGGCAGCCATTGCTTCCATGTGCGTTCATCCTGAGGTCACTCACAGGCCTTTTATGGGTGAGGTTGTGCAGGCTCTAAAGCTGATATACAATGACACGGATGAGACTGGTGGGGACTGCCATAGTCAAAAGGAGTCTTCTGTCCCGGACTCCTTTAAATGTGATCTTGCCCCTTCTGATAGCAGTTGGTGGAACGCTGGTGGACTCACTCCCCGGTTAAATTACGGGCAAGCCTCTTCTTTCATTACAATGGAGTATAGCTCAGGGACTCTTGAAGACATGGAAAACAGACCGTTTTCAGTTTCAAGTTTGTTCGGGAATGGGGTATCTTTACCAATTAGACATGGCAATAGATCAGGGCCATTGAGAACCATCCGTAGCAAGCCGTCTTTCTACAGAGCAAGAGGAAGTATGAGTGAGCATGGAGGTCTGCTTGGAAAGCGTGCTTGGAACGATGGATTCTGGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0002237 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009719 GO:0009725 GO:0009751 GO:0009889 GO:0009890 GO:0009892 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0042221 GO:0042493 GO:0042742 GO:0042802 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0046677 GO:0048519 GO:0048523 GO:0048583 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

774

Amino Acids

84.74

Weight (kDa)

9.29

Isoelectric Point (pI)

46.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALE2_N	PF23180	127 - 245	2.7e-54	Receptor-like PK ALE2 N-terminal domain
Pkinase	PF00069	372 - 585	5.1e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	374 - 643	7.2e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011530)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g41060 FvH4_2g41060 FvH4_2g41060
malus_domestica	MD00G1143500.v1.1 MD15G1039500.v1.1
prunus_persica	Prupe.1G393000_v2.0.a1
pyrus_communis	pycom08g04760 pycom15g03690
rosa_chinensis	RchiOBHm_Chr6g0299501
rosa_laevigata	RLG00000011426
rosa_multiflora	Rmu_sc0001184.1_g000004
rosa_roxburghii	Rroxscaffold_7G00168630
rosa_rugosa	Rorug06G0289200 Rorug06G0289200 Rorug06G0289300
rosa_samantha	Rh6AG400500 Rh6BG409200 Rh6CG414700 Rh6DG401600
rosa_wichuraiana	Rw6G035060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	235, 241
Acc36I	ACCTGC	2 cut(s)	235, 241
AccII	CGCG	1 cut(s)	138
AciI	CCGC	1 cut(s)	1772
AclWI	GGATC	2 cut(s)	1805, 1818
AcoI	YGGCCR	1 cut(s)	104
AcsI	RAATTY	2 cut(s)	1235, 1750
AcuI	CTGAAG	3 cut(s)	195, 1008, 1593
AcvI	CACGTG	2 cut(s)	956, 1761
AdeI	CACNNNGTG	1 cut(s)	413
AfaI	GTAC	3 cut(s)	7, 713, 870
AfiI	CCNNNNNNNGG	2 cut(s)	1738, 1910
AflIII	ACRYGT	2 cut(s)	1150, 1725
AgsI	TTSAA	8 cut(s)	99, 177, 658, 754, 1310, 1840, 2129, 2160
AjiI	CACGTC	1 cut(s)	1151
AjnI	CCWGG	2 cut(s)	355, 724
AjuI	GAANNNNNNNTTGG	6 cut(s)	1006, 1038, 1128, 1160, 2284, 2316
AluBI	AGCT	8 cut(s)	46, 257, 458, 1017, 1326, 1339, 1936, 2115
AluI	AGCT	8 cut(s)	46, 257, 458, 1017, 1326, 1339, 1936, 2115
Alw26I	GTCTC	3 cut(s)	1221, 1368, 1952
AlwI	GGATC	2 cut(s)	1805, 1818
AoxI	GGCC	4 cut(s)	104, 1393, 1901, 2213
ApaI	GGGCCC	1 cut(s)	1397
ApeKI	GCWGC	6 cut(s)	1323, 1436, 1690, 1774, 1798, 1859
ApoI	RAATTY	2 cut(s)	1235, 1750
AspLEI	GCGC	2 cut(s)	138, 140
AspS9I	GGNCC	5 cut(s)	764, 947, 1393, 1394, 2213
AsuC2I	CCSGG	2 cut(s)	2000, 2068
AsuHPI	GGTGA	6 cut(s)	267, 399, 732, 1265, 1478, 1925
AvaII	GGWCC	2 cut(s)	764, 947
AxyI	CCTNAGG	2 cut(s)	1737, 1887
BaeGI	GKGCMC	3 cut(s)	515, 1317, 1397
BaeI	ACNNNNGTAYC	2 cut(s)	1011, 1044
BamHI	GGATCC	1 cut(s)	1810
BanII	GRGCYC	1 cut(s)	1397
BbrPI	CACGTG	2 cut(s)	956, 1761
BbsI	GAAGAC	4 cut(s)	325, 934, 1983, 2136
BbvCI	CCTCAGC	1 cut(s)	507
BbvI	GCAGC	6 cut(s)	1335, 1448, 1677, 1761, 1810, 1871
BccI	CCATC	5 cut(s)	190, 940, 1169, 2234, 2303
BceAI	ACGGC	1 cut(s)	2224
BciT130I	CCWGG	2 cut(s)	357, 726
BciVI	GTATCC	2 cut(s)	723, 1039
BclI	TGATCA	1 cut(s)	364
BcnI	CCSGG	2 cut(s)	2000, 2068
BcoDI	GTCTC	3 cut(s)	1221, 1368, 1952
BfaI	CTAG	5 cut(s)	254, 936, 1130, 1503, 1560
BfmI	CTRYAG	1 cut(s)	2248
BfuAI	ACCTGC	2 cut(s)	235, 241
BfuI	GTATCC	2 cut(s)	723, 1039
BglI	GCCNNNNNGGC	1 cut(s)	1433
BglII	AGATCT	1 cut(s)	977
BisI	GCNGC	6 cut(s)	1324, 1437, 1691, 1775, 1799, 1860
BlsI	GCNGC	6 cut(s)	1325, 1438, 1692, 1776, 1800, 1861
Bme1390I	CCNGG	4 cut(s)	357, 726, 2000, 2068
Bme18I	GGWCC	2 cut(s)	764, 947
BmgBI	CACGTC	1 cut(s)	1151
BmgT120I	GGNCC	5 cut(s)	764, 947, 1393, 1394, 2213
BmiI	GGNNCC	4 cut(s)	381, 603, 1395, 1812
BmrFI	CCNGG	4 cut(s)	357, 726, 2000, 2068
BmrI	ACTGGG	1 cut(s)	1414
BmsI	GCATC	2 cut(s)	224, 401
BmuI	ACTGGG	1 cut(s)	1414
BpiI	GAAGAC	4 cut(s)	325, 934, 1983, 2136
BplI	GAGNNNNNCTC	2 cut(s)	2099, 2131
BpmI	CTGGAG	3 cut(s)	26, 152, 228
Bpu10I	CCTNAGC	4 cut(s)	67, 507, 1819, 2116
BpuMI	CCSGG	2 cut(s)	2000, 2068
BsaAI	YACGTR	3 cut(s)	516, 956, 1761
BsaBI	GATNNNNATC	1 cut(s)	1470
BsaI	GGTCTC	1 cut(s)	1221
BsaJI	CCNNGG	8 cut(s)	355, 724, 725, 1044, 1159, 1429, 1536, 2066
BsaXI	ACNNNNNCTCC	4 cut(s)	267, 297, 379, 409
Bsc4I	CCNNNNNNNGG	2 cut(s)	1738, 1910
Bse1I	ACTGG	8 cut(s)	135, 245, 453, 476, 775, 1053, 1409, 1966
Bse21I	CCTNAGG	2 cut(s)	1737, 1887
Bse3DI	GCAATG	4 cut(s)	840, 1239, 1354, 1863
Bse8I	GATNNNNATC	1 cut(s)	1470
BseBI	CCWGG	2 cut(s)	357, 726
BseDI	CCNNGG	8 cut(s)	355, 724, 725, 1044, 1159, 1429, 1536, 2066
BseGI	GGATG	6 cut(s)	215, 1180, 1422, 1882, 1960, 2226
BseJI	GATNNNNATC	1 cut(s)	1470
BseLI	CCNNNNNNNGG	2 cut(s)	1738, 1910
BseMI	GCAATG	4 cut(s)	840, 1239, 1354, 1863
BseMII	CTCAG	7 cut(s)	81, 104, 498, 1077, 1751, 1878, 2130
BseNI	ACTGG	8 cut(s)	135, 245, 453, 476, 775, 1053, 1409, 1966
BsePI	GCGCGC	1 cut(s)	136
BseRI	GAGGAG	1 cut(s)	78
BseSI	GKGCMC	3 cut(s)	515, 1317, 1397
BseXI	GCAGC	6 cut(s)	1335, 1448, 1677, 1761, 1810, 1871
BseYI	CCCAGC	1 cut(s)	260
BsgI	GTGCAG	4 cut(s)	213, 219, 936, 1943
Bsh1236I	CGCG	1 cut(s)	138
BshFI	GGCC	4 cut(s)	106, 1395, 1903, 2215
BsiSI	CCGG	3 cut(s)	1824, 2000, 2068
BslFI	GGGAC	5 cut(s)	1421, 1714, 1982, 1982, 2134
BslI	CCNNNNNNNGG	2 cut(s)	1738, 1910
BsmAI	GTCTC	3 cut(s)	1221, 1368, 1952
BsmFI	GGGAC	5 cut(s)	1421, 1714, 1982, 1982, 2134
BsmI	GAATGC	1 cut(s)	1008
BsnI	GGCC	4 cut(s)	106, 1395, 1903, 2215
Bso31I	GGTCTC	1 cut(s)	1221
Bsp120I	GGGCCC	1 cut(s)	1393
Bsp1286I	GDGCHC	3 cut(s)	515, 1317, 1397
Bsp1407I	TGTACA	1 cut(s)	711
Bsp143I	GATC	5 cut(s)	364, 977, 1810, 2017, 2207
Bsp19I	CCATGG	2 cut(s)	1044, 1159
BspACI	CCGC	1 cut(s)	1772
BspANI	GGCC	4 cut(s)	106, 1395, 1903, 2215
BspCNI	CTCAG	7 cut(s)	80, 103, 499, 1078, 1750, 1879, 2129
BspFNI	CGCG	1 cut(s)	138
BspHI	TCATGA	1 cut(s)	1459
BspLI	GGNNCC	4 cut(s)	381, 603, 1395, 1812
BspMI	ACCTGC	2 cut(s)	235, 241
BspPI	GGATC	2 cut(s)	1805, 1818
BspTNI	GGTCTC	1 cut(s)	1221
BsrDI	GCAATG	4 cut(s)	840, 1239, 1354, 1863
BsrGI	TGTACA	1 cut(s)	711
BsrI	ACTGG	8 cut(s)	135, 245, 453, 476, 775, 1053, 1409, 1966
BssECI	CCNNGG	8 cut(s)	355, 724, 725, 1044, 1159, 1429, 1536, 2066
BssHII	GCGCGC	1 cut(s)	136
BssMI	GATC	5 cut(s)	364, 977, 1810, 2017, 2207
BssT1I	CCWWGG	4 cut(s)	1044, 1159, 1429, 1536
Bst2UI	CCWGG	2 cut(s)	357, 726
Bst4CI	ACNGT	4 cut(s)	583, 1232, 1277, 2148
Bst6I	CTCTTC	1 cut(s)	2095
BstAPI	GCANNNNNTGC	2 cut(s)	221, 1865
BstAUI	TGTACA	1 cut(s)	711
BstBAI	YACGTR	3 cut(s)	516, 956, 1761
BstC8I	GCNNGC	7 cut(s)	138, 1317, 1321, 1926, 2085, 2237, 2298
BstDEI	CTNAG	8 cut(s)	67, 90, 507, 1086, 1737, 1819, 1887, 2116
BstDSI	CCRYGG	2 cut(s)	1044, 1159
BstF5I	GGATG	6 cut(s)	215, 1180, 1422, 1882, 1960, 2226
BstFNI	CGCG	1 cut(s)	138
BstHHI	GCGC	2 cut(s)	138, 140
BstKTI	GATC	5 cut(s)	367, 980, 1813, 2020, 2210
BstMAI	GTCTC	3 cut(s)	1221, 1368, 1952
BstMBI	GATC	5 cut(s)	364, 977, 1810, 2017, 2207
BstMWI	GCNNNNNNNGC	9 cut(s)	221, 851, 860, 1014, 1433, 1565, 1856, 1865, 2293
BstNI	CCWGG	2 cut(s)	357, 726
BstNSI	RCATGY	1 cut(s)	1729
BstSCI	CCNGG	4 cut(s)	355, 724, 1998, 2066
BstSFI	CTRYAG	1 cut(s)	2248
BstSLI	GKGCMC	3 cut(s)	515, 1317, 1397
BstUI	CGCG	1 cut(s)	138
BstV1I	GCAGC	6 cut(s)	1335, 1448, 1677, 1761, 1810, 1871
BstV2I	GAAGAC	4 cut(s)	325, 934, 1983, 2136
BstX2I	RGATCY	2 cut(s)	977, 1810
BstYI	RGATCY	2 cut(s)	977, 1810
Bsu36I	CCTNAGG	2 cut(s)	1737, 1887
BsuI	GTATCC	2 cut(s)	723, 1039
BsuRI	GGCC	4 cut(s)	106, 1395, 1903, 2215
BtgI	CCRYGG	2 cut(s)	1044, 1159
BtgZI	GCGATG	2 cut(s)	1652, 1680
BtrI	CACGTC	1 cut(s)	1151
BtsCI	GGATG	6 cut(s)	215, 1180, 1422, 1882, 1960, 2226
BtsI	GCAGTG	3 cut(s)	630, 795, 1360
BtsIMutI	CAGTG	4 cut(s)	128, 630, 795, 1360
BveI	ACCTGC	2 cut(s)	235, 241
Cac8I	GCNNGC	7 cut(s)	138, 1317, 1321, 1926, 2085, 2237, 2298
CciI	TCATGA	1 cut(s)	1459
CfoI	GCGC	2 cut(s)	138, 140
Cfr13I	GGNCC	5 cut(s)	764, 947, 1393, 1394, 2213
CseI	GACGC	1 cut(s)	1418
Csp6I	GTAC	3 cut(s)	6, 712, 869
CspCI	CAANNNNNGTGG	2 cut(s)	732, 767
CviQI	GTAC	3 cut(s)	6, 712, 869
DdeI	CTNAG	8 cut(s)	67, 90, 507, 1086, 1737, 1819, 1887, 2116
DpnI	GATC	5 cut(s)	366, 979, 1812, 2019, 2209
DpnII	GATC	5 cut(s)	364, 977, 1810, 2017, 2207
DraI	TTTAAA	1 cut(s)	2011
DraIII	CACNNNGTG	1 cut(s)	413
EaeI	YGGCCR	1 cut(s)	104
Eam1104I	CTCTTC	1 cut(s)	2095
EarI	CTCTTC	1 cut(s)	2095
Eco130I	CCWWGG	4 cut(s)	1044, 1159, 1429, 1536
Eco147I	AGGCCT	1 cut(s)	1903
Eco24I	GRGCYC	1 cut(s)	1397
Eco31I	GGTCTC	1 cut(s)	1221
Eco32I	GATATC	1 cut(s)	999
Eco47I	GGWCC	2 cut(s)	764, 947
Eco57I	CTGAAG	3 cut(s)	195, 1008, 1593
Eco72I	CACGTG	2 cut(s)	956, 1761
Eco81I	CCTNAGG	2 cut(s)	1737, 1887
EcoO109I	RGGNCCY	2 cut(s)	1393, 1394
EcoRI	GAATTC	1 cut(s)	1235
EcoRII	CCWGG	2 cut(s)	355, 724
EcoRV	GATATC	1 cut(s)	999
EcoT14I	CCWWGG	4 cut(s)	1044, 1159, 1429, 1536
EcoT38I	GRGCYC	1 cut(s)	1397
ErhI	CCWWGG	4 cut(s)	1044, 1159, 1429, 1536
FalI	AAGNNNNNCTT	4 cut(s)	426, 458, 1006, 1038
FaqI	GGGAC	5 cut(s)	1421, 1714, 1982, 1982, 2134
FauNDI	CATATG	1 cut(s)	646
FbaI	TGATCA	1 cut(s)	364
Fnu4HI	GCNGC	6 cut(s)	1324, 1437, 1691, 1775, 1799, 1860
FokI	GGATG	6 cut(s)	202, 1187, 1429, 1869, 1967, 2213
FriOI	GRGCYC	1 cut(s)	1397
Fsp4HI	GCNGC	6 cut(s)	1324, 1437, 1691, 1775, 1799, 1860
FspBI	CTAG	5 cut(s)	254, 936, 1130, 1503, 1560
GlaI	GCGC	2 cut(s)	137, 139
GluI	GCNGC	6 cut(s)	1324, 1437, 1691, 1775, 1799, 1860
GsaI	CCCAGC	1 cut(s)	264
GsuI	CTGGAG	3 cut(s)	26, 152, 228
HaeIII	GGCC	4 cut(s)	106, 1395, 1903, 2215
HapII	CCGG	3 cut(s)	1824, 2000, 2068
HgaI	GACGC	1 cut(s)	1418
HhaI	GCGC	2 cut(s)	138, 140
Hin6I	GCGC	2 cut(s)	136, 138
HinP1I	GCGC	2 cut(s)	136, 138
HincII	GTYRAC	2 cut(s)	1381, 1723
HindII	GTYRAC	2 cut(s)	1381, 1723
HpaII	CCGG	3 cut(s)	1824, 2000, 2068
HphI	GGTGA	6 cut(s)	267, 399, 732, 1265, 1478, 1925
Hpy166II	GTNNAC	6 cut(s)	407, 1041, 1156, 1381, 1723, 2057
Hpy188I	TCNGA	6 cut(s)	12, 93, 440, 1087, 1546, 2032
Hpy188III	TCNNGA	7 cut(s)	1400, 1460, 1660, 1707, 1886, 2126, 2170
Hpy8I	GTNNAC	6 cut(s)	407, 1041, 1156, 1381, 1723, 2057
HpyCH4III	ACNGT	4 cut(s)	583, 1232, 1277, 2148
HpyCH4IV	ACGT	5 cut(s)	515, 955, 1081, 1150, 1760
HpyF10VI	GCNNNNNNNGC	9 cut(s)	221, 851, 860, 1014, 1433, 1565, 1856, 1865, 2293
HpyF3I	CTNAG	8 cut(s)	67, 90, 507, 1086, 1737, 1819, 1887, 2116
HpySE526I	ACGT	5 cut(s)	515, 955, 1081, 1150, 1760
HspAI	GCGC	2 cut(s)	136, 138
Ksp22I	TGATCA	1 cut(s)	364
Kzo9I	GATC	5 cut(s)	364, 977, 1810, 2017, 2207
LmnI	GCTCC	7 cut(s)	133, 262, 340, 379, 463, 890, 1022
Lsp1109I	GCAGC	6 cut(s)	1335, 1448, 1677, 1761, 1810, 1871
LweI	GCATC	2 cut(s)	224, 401
MaeI	CTAG	5 cut(s)	254, 936, 1130, 1503, 1560
MaeII	ACGT	5 cut(s)	515, 955, 1081, 1150, 1760
MaeIII	GTNAC	4 cut(s)	78, 719, 1756, 1891
MalI	GATC	5 cut(s)	366, 979, 1812, 2019, 2209
MboI	GATC	5 cut(s)	364, 977, 1810, 2017, 2207
MfeI	CAATTG	1 cut(s)	74
MflI	RGATCY	2 cut(s)	977, 1810
MhlI	GDGCHC	3 cut(s)	515, 1317, 1397
MluCI	AATT	8 cut(s)	74, 147, 697, 1164, 1235, 1750, 2074, 2190
MlyI	GAGTC	5 cut(s)	1370, 1997, 1997, 2052, 2116
MmeI	TCCRAC	2 cut(s)	471, 904
MseI	TTAA	7 cut(s)	110, 594, 1068, 1259, 1497, 2010, 2072
MslI	CAYNNNNRTG	3 cut(s)	306, 1371, 2102
MspA1I	CMGCKG	1 cut(s)	1774
MspI	CCGG	3 cut(s)	1824, 2000, 2068
MspR9I	CCNGG	4 cut(s)	357, 726, 2000, 2068
MunI	CAATTG	1 cut(s)	74
Mva1269I	GAATGC	1 cut(s)	1008
MvaI	CCWGG	2 cut(s)	357, 726
MvnI	CGCG	1 cut(s)	138
MwoI	GCNNNNNNNGC	9 cut(s)	221, 851, 860, 1014, 1433, 1565, 1856, 1865, 2293
NciI	CCSGG	2 cut(s)	2000, 2068
NcoI	CCATGG	2 cut(s)	1044, 1159
NdeI	CATATG	1 cut(s)	646
NdeII	GATC	5 cut(s)	364, 977, 1810, 2017, 2207
NlaIV	GGNNCC	4 cut(s)	381, 603, 1395, 1812
NmuCI	GTSAC	3 cut(s)	78, 1756, 1891
NspI	RCATGY	1 cut(s)	1729
PagI	TCATGA	1 cut(s)	1459
PaqCI	CACCTGC	2 cut(s)	235, 241
PasI	CCCWGGG	1 cut(s)	725
PauI	GCGCGC	1 cut(s)	136
PceI	AGGCCT	1 cut(s)	1903
PciI	ACATGT	1 cut(s)	1725
PcsI	WCGNNNNNNNCGW	1 cut(s)	1662
PctI	GAATGC	1 cut(s)	1008
PfeI	GAWTC	5 cut(s)	13, 654, 959, 1466, 2313
PfoI	TCCNGGA	1 cut(s)	1998
PkrI	GCNGC	6 cut(s)	1325, 1438, 1692, 1776, 1800, 1861
PleI	GAGTC	5 cut(s)	1369, 1996, 1997, 2052, 2116
PmaCI	CACGTG	2 cut(s)	956, 1761
PmlI	CACGTG	2 cut(s)	956, 1761
PpsI	GAGTC	5 cut(s)	1369, 1996, 1997, 2052, 2116
Ppu21I	YACGTR	3 cut(s)	516, 956, 1761
PscI	ACATGT	1 cut(s)	1725
Psp6I	CCWGG	2 cut(s)	355, 724
PspCI	CACGTG	2 cut(s)	956, 1761
PspFI	CCCAGC	1 cut(s)	260
PspGI	CCWGG	2 cut(s)	355, 724
PspN4I	GGNNCC	4 cut(s)	381, 603, 1395, 1812
PspOMI	GGGCCC	1 cut(s)	1393
PspPI	GGNCC	5 cut(s)	764, 947, 1393, 1394, 2213
PsuI	RGATCY	2 cut(s)	977, 1810
PteI	GCGCGC	1 cut(s)	136
RsaI	GTAC	3 cut(s)	7, 713, 870
RsaNI	GTAC	3 cut(s)	6, 712, 869
RseI	CAYNNNNRTG	3 cut(s)	306, 1371, 2102
SaqAI	TTAA	7 cut(s)	110, 594, 1068, 1259, 1497, 2010, 2072
SatI	GCNGC	6 cut(s)	1324, 1437, 1691, 1775, 1799, 1860
Sau3AI	GATC	5 cut(s)	364, 977, 1810, 2017, 2207
Sau96I	GGNCC	5 cut(s)	764, 947, 1393, 1394, 2213
SchI	GAGTC	5 cut(s)	1370, 1997, 1997, 2052, 2116
ScrFI	CCNGG	4 cut(s)	357, 726, 2000, 2068
SduI	GDGCHC	3 cut(s)	515, 1317, 1397
SfaNI	GCATC	2 cut(s)	224, 401
SfcI	CTRYAG	1 cut(s)	2248
SinI	GGWCC	2 cut(s)	764, 947
SmiMI	CAYNNNNRTG	3 cut(s)	306, 1371, 2102
Sse9I	AATT	8 cut(s)	74, 147, 697, 1164, 1235, 1750, 2074, 2190
SseBI	AGGCCT	1 cut(s)	1903
SsiI	CCGC	1 cut(s)	1772
SspMI	CTAG	5 cut(s)	254, 936, 1130, 1503, 1560
StuI	AGGCCT	1 cut(s)	1903
StyD4I	CCNGG	4 cut(s)	355, 724, 1998, 2066
StyI	CCWWGG	4 cut(s)	1044, 1159, 1429, 1536
TaaI	ACNGT	4 cut(s)	583, 1232, 1277, 2148
TaiI	ACGT	5 cut(s)	518, 958, 1084, 1153, 1763
TaqI	TCGA	1 cut(s)	185
TaqII	GACCGA	1 cut(s)	935
TasI	AATT	8 cut(s)	74, 147, 697, 1164, 1235, 1750, 2074, 2190
TatI	WGTACW	2 cut(s)	711, 868
TfiI	GAWTC	5 cut(s)	13, 654, 959, 1466, 2313
Tru1I	TTAA	7 cut(s)	110, 594, 1068, 1259, 1497, 2010, 2072
Tru9I	TTAA	7 cut(s)	110, 594, 1068, 1259, 1497, 2010, 2072
TscAI	CASTG	4 cut(s)	135, 637, 802, 1360
TseFI	GTSAC	3 cut(s)	78, 1756, 1891
TseI	GCWGC	6 cut(s)	1323, 1436, 1690, 1774, 1798, 1859
Tsp45I	GTSAC	3 cut(s)	78, 1756, 1891
TspGWI	ACGGA	4 cut(s)	275, 1429, 1967, 2219
TspRI	CASTG	4 cut(s)	135, 637, 802, 1360
VpaK11BI	GGWCC	2 cut(s)	764, 947
XapI	RAATTY	2 cut(s)	1235, 1750
XceI	RCATGY	1 cut(s)	1729
XspI	CTAG	5 cut(s)	254, 936, 1130, 1503, 1560

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.