Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0011296

Physical Location & Seq

Genomic Coordinates Reverse (-)

50731873 .. 50740306

Gene Structure 8434 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0358600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2982 bp

ATGGCGATGTACGTCATTTCACGGCGAGTAACCGCCGGATCGACGCAGTTAACGGCGTTCCGTTACGCCACTACTTGCTGGAGGAACTATTCGACGTCGTTTCGCGAGGAAAGGGACACCTTTGGACCCATTCTCGTCCCCTCAGACAAACTATGGGGAGCTCAAACTCAGAGATCGTTGCAGAACTTCGATATCGGCGGCGACCGCGAACGAATGCCGGAGCCTATTATTCGCGCCTTCGGTGTCCTCAAGAAATGTGCTGCCAAGGTGAACATGGAGTATGGTCTTGACCAATCTATAGGGAAAGCTATAATGCAGGCTGCACAAGAAGTGGCCGAGGGGAAGCTAAATCAGCACTTTCCACTTGTTGTGTGGCAAACTGGTAGTGGAACACAAAGCAACATGAATGCCAATGAGGTCATTGCAAACAGAGCAGCTGAGATACTTGGACATAAGCGCGGCGAGAAGTTTGTGCATCCGAATGACCATGTTAACAGATCACAGTCTTCTAATGACACTTTCCCATCTGTCATGCACATTGCAGCTGCGATGGAAGTAAATTCAAGACTGGTACCAAATTTGAAAACATTGCATTCTTCGCTACAACAAAAGTCGGATGAGTTCAAAGATATTGTTAAAATTGGACGCACTCACACACAAGATGCAACACCTTTGACTCTTGGGCAAGAGTTTAGCGGCTATTCTACACAGGTGAAGTATGGAATCGAGCGAGTCTTGTGCACTCTACCCCACATGTATCAGCTGGCACAGGGTGGTACTGCTGTTGGGACTGGATTGAATACAAAGAAGGGATTTGATGTAAAGATAGCTGCAGCAGTAGCTGATGAAACAAACTTACCATTTGTCACCGCAGAAAACAAGTTTGAAGCTTTGGCTGCACATGATGCTTTTGTGGAAACTAGTGGAGCCCTGAATACAGTTGCTACTTCTTTGATGAAAATAGCTAATGACATACGTTTATTAGGAAGTGGTCCACGATGTGGTCTTGGTGAACTCATTCTTCCTGAAAATGAGCCTGGAAGCAGCATTATGCCGGGGAAGGTTAACCCAACCCAGTGTGAGGCTATCACAATGGTTTGTGCTCAGGTTATGGGTAACAATGTGGCCATTACAGTAGGTGGATCTAATGGTCATTTTGAACTAAATGTATTCAAGCCAATGATTGCTAGTGCTCTCCTACACTCTGTTAGATTACTTGGGGATGCATCTGCTTCCTTTGAAAAGAACTGTGTTAGAGGAATTGAAGCCAACAGGGAAAGAATCTCAAAGTTACTTCATGAGTCACTGATGTTGGTCACGTCCTTGAATCCTAAAATTGGTTATGACAATGCTGCGGCAGTTGCAAAGAAAGCCCACAAGGAAGGATCCACTTTGAAGGATGCTGCATTAAAACTTGGGGTGCTAACGAGTGAAGAGTTTGATAATCTTGTGGTGCCCGAGAAGATGATTGGCCCGATTCAAAGAAGATTGTATTTCTATTGGCCGAAACAGAGAAAGAGGATTAAACAAGAAACCAAGTACGTAAAAACTAATTTCATCAGAGAACACAGAACAATGACATCTGATTCAGCGTCATTTAGAGAGGAACGGGACACATTTGGACCCATAAATGTTCCTTCAGACAAGTTATGGGGAGCGCAGACTCAAAGATCCTTGCAGAATTTCGATATAGGAGGCGAGCGTGAACAAATGCGCGAACCTATTATTCGGGCCTTTGGCGTCCTCAAAAAATGTGCTGCCAAGGTGAACATGGAGTATGGTCTTGATCAATCTATAGGGAAGGCTATAATGGAAGCTGCCCAAGAAGTGGCTGCGGGAAAGCTAAATCAACATTTTCCACTTGTTGTTTGGCAAACTGGCAGTGGAACCCAAAGCAACATGAATGCCAATGAGGTCATTGCAAACAGAGCAGCTGAGATACTTGGCCATAAGCGCGGGGAGAAGTTTGTGCACCCAAATGACCATGTCAACAAATCACAATCTTCTAACGACACTTTCCCAACTGTCATGCACATTGCAGCAGCAGTGGAACTAAATTCAAGACTGATACCGAGTTTGAAAGTTTTACATGCTGCTTTAGATTCAAAGACTAATGAATTCAAAGACATTGTTAAAATCGGACGTACTCACACGCAAGATGCAACACCTTTGACTCTTGGGCAAGAGTTTAGCGGCTATTCTACACAAGTGAAGTATGGAATCGATCGAGTCTTGGGCACTCTTCCCCGAATGTATCAGCTTGCACAGGGCGGTACTGCTGTTGGGACTGGATTGAACACGAAGAAGGGATTTGATGTAAAGATAGCTGCAGCGGTAGCTGAGGAAACAAAGTTACCATTTGTTACAGCAGAAAACAAGTTTGAAGCCTTGGCGGCCCATGATGCTTTTGTGGAAACTAGTGGAGCCCTAAATACAGTTGGTACTTCTCTGATGAAGATTGCAAATGACATACGTTTCTTAGGAAGCGGTCCACGTTGTGGCCTTGGTGAACTTAATCTTCCAGAAAACGAGCCTGGAAGCAGCATTATGCCTGGAAAGGTTAATCCTACCCAGTGTGAGGCTCTCACAATGGTCTGTGCTCAGGTTATGGGTAATCATGTGGCCATTACAGTTGGCGGATCAAATGGTCACTTTGAACTTAACGTATTCAAACCGATGATGGCTAGTAATCTTCTACATTCTCTAAGGCTACTGGCTGATGCATCTGTCTCATTTGAAAAGAACTGCGTGAAAGGAATTCAAGCCAACAAGGAAAGAATTTCGAAGTTACTTCATGAGTCGCTAATGCTGGTGACCTCCTTGAATCCTAAAATTGGTTATGACAATGCCGCAGCGGTTGCAAAGAAAGCCCACAAGGAGGGATCAACTTTGAAGGAAGCTGCAATGAAACTTGCTGTGCTAACTAGTGAAGAATTTGATAGTCTTGTGGTGCCTGAGAAGATGATCGGTCCATCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005746 GO:0005749 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0010033 GO:0016020 GO:0019866 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0032991 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045257 GO:0045273 GO:0045281 GO:0045283 GO:0050896 GO:0070469 GO:0098796 GO:0098798 GO:0098800 GO:0098803 GO:1902494 GO:1990204

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4370

Protein Analysis

993

Amino Acids

108.15

Weight (kDa)

8.77

Isoelectric Point (pI)

28.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lyase_1	PF00206	44 - 372	3.1e-115	Lyase
FumaraseC_C	PF10415	438 - 490	1.9e-23	Fumarase C C-terminus
Lyase_1	PF00206	541 - 871	8.7e-114	Lyase
FumaraseC_C	PF10415	937 - 989	2.9e-22	Fumarase C C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47420
fragaria_vesca	FvH4_2g34650 FvH4_2g34650 FvH4_2g34710
malus_domestica	MD04G1229600.v1.1 MD08G1103900.v1.1 MD15G1085100.v1.1
prunus_persica	Prupe.1G439200_v2.0.a1 Prupe.1G439200_v2.0.a1
pyrus_communis	pycom08g08520 pycom15g08040
rosa_chinensis	RchiOBHm_Chr6g0307421
rosa_laevigata	RLG00000010715
rosa_multiflora	Rmu_sc0000031.1_g000016
rosa_roxburghii	Rroxscaffold_7G00161010
rosa_rugosa	Rorug06G0358500 Rorug06G0358600
rosa_samantha	Rh6CG484200 Rh6DG470900
rosa_wichuraiana	Rw6G040890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	98
Acc65I	GGTACC	1 cut(s)	571
AccB1I	GGYRCC	3 cut(s)	571, 1453, 2950
AccB7I	CCANNNNNTGG	3 cut(s)	1001, 1828, 2498
AccII	CGCG	6 cut(s)	105, 207, 234, 459, 1716, 1956
AclWI	GGATC	7 cut(s)	46, 1150, 1380, 1393, 1665, 2647, 2890
AcoI	YGGCCR	5 cut(s)	333, 1125, 1502, 1945, 2622
AcsI	RAATTY	8 cut(s)	559, 577, 1681, 2056, 2117, 2757, 2778, 2933
AcuI	CTGAAG	1 cut(s)	1623
AcyI	GRCGYC	2 cut(s)	95, 1740
AdeI	CACNNNGTG	3 cut(s)	773, 1001, 2498
AfaI	GTAC	7 cut(s)	11, 573, 778, 1541, 2146, 2275, 2443
AfiI	CCNNNNNNNGG	8 cut(s)	1001, 1081, 1337, 1828, 2498, 2578, 2834, 2878
AflIII	ACRYGT	1 cut(s)	753
AhlI	ACTAGT	3 cut(s)	920, 2417, 2924
AjiI	CACGTC	1 cut(s)	1320
AjnI	CCWGG	3 cut(s)	1036, 2533, 2551
Alw21I	GWGCWC	6 cut(s)	163, 743, 1105, 1195, 1974, 2602
Alw26I	GTCTC	1 cut(s)	2734
Alw44I	GTGCAC	2 cut(s)	739, 1970
AlwI	GGATC	7 cut(s)	46, 1150, 1380, 1393, 1665, 2647, 2890
AlwNI	CAGNNNCTG	1 cut(s)	842
Ama87I	CYCGRG	1 cut(s)	1457
AoxI	GGCC	9 cut(s)	333, 1125, 1471, 1502, 1731, 1945, 2394, 2500, 2622
ApaLI	GTGCAC	2 cut(s)	739, 1970
ApoI	RAATTY	8 cut(s)	559, 577, 1681, 2056, 2117, 2757, 2778, 2933
Asp700I	GAANNNNTTC	1 cut(s)	1017
Asp718I	GGTACC	1 cut(s)	571
AspLEI	GCGC	5 cut(s)	236, 459, 1660, 1716, 1956
AspS9I	GGNCC	8 cut(s)	125, 992, 1472, 1622, 1731, 2395, 2489, 2969
AsuC2I	CCSGG	1 cut(s)	1056
AsuHPI	GGTGA	7 cut(s)	280, 724, 859, 1022, 1777, 2519, 2824
AsuII	TTCGAA	1 cut(s)	2783
AvaI	CYCGRG	1 cut(s)	1457
AvaII	GGWCC	5 cut(s)	125, 992, 1622, 2489, 2969
BaeGI	GKGCMC	4 cut(s)	743, 1458, 1974, 2240
BaeI	ACNNNNGTAYC	4 cut(s)	768, 801, 2265, 2298
BalI	TGGCCA	3 cut(s)	1127, 1947, 2624
BamHI	GGATCC	1 cut(s)	1385
BanI	GGYRCC	3 cut(s)	571, 1453, 2950
BanII	GRGCYC	3 cut(s)	163, 931, 2428
BbsI	GAAGAC	1 cut(s)	498
Bbv12I	GWGCWC	6 cut(s)	163, 743, 1105, 1195, 1974, 2602
BbvCI	CCTCAGC	1 cut(s)	2340
BccI	CCATC	4 cut(s)	532, 544, 2674, 2980
BceAI	ACGGC	2 cut(s)	38, 69
BcgI	CGANNNNNNTGC	2 cut(s)	720, 754
BciT130I	CCWGG	3 cut(s)	1038, 2535, 2553
BclI	TGATCA	1 cut(s)	1786
BcnI	CCSGG	1 cut(s)	1056
BcoDI	GTCTC	1 cut(s)	2734
BcuI	ACTAGT	3 cut(s)	920, 2417, 2924
BfaI	CTAG	5 cut(s)	921, 1188, 2418, 2685, 2925
BfmI	CTRYAG	4 cut(s)	297, 831, 1794, 2328
BglI	GCCNNNNNGGC	1 cut(s)	2393
Bme1390I	CCNGG	4 cut(s)	1038, 1056, 2535, 2553
Bme18I	GGWCC	5 cut(s)	125, 992, 1622, 2489, 2969
BmeT110I	CYCGRG	1 cut(s)	1457
BmgBI	CACGTC	1 cut(s)	1320
BmgT120I	GGNCC	8 cut(s)	125, 992, 1472, 1622, 1731, 2395, 2489, 2969
BmrFI	CCNGG	4 cut(s)	1038, 1056, 2535, 2553
BmrI	ACTGGG	2 cut(s)	1069, 2566
BmuI	ACTGGG	2 cut(s)	1069, 2566
BpiI	GAAGAC	1 cut(s)	498
BpmI	CTGGAG	1 cut(s)	100
Bpu10I	CCTNAGC	3 cut(s)	1104, 2340, 2601
Bpu14I	TTCGAA	1 cut(s)	2783
BpuEI	CTTGAG	1 cut(s)	233
BpuMI	CCSGG	1 cut(s)	1056
Bsa29I	ATCGAT	1 cut(s)	2223
BsaAI	YACGTR	1 cut(s)	1543
BsaHI	GRCGYC	2 cut(s)	95, 1740
BsaJI	CCNNGG	6 cut(s)	264, 336, 1055, 1761, 2388, 2503
Bsc4I	CCNNNNNNNGG	8 cut(s)	1001, 1081, 1337, 1828, 2498, 2578, 2834, 2878
Bse1I	ACTGG	8 cut(s)	385, 573, 796, 1075, 1882, 2293, 2572, 2718
Bse3DI	GCAATG	6 cut(s)	420, 537, 587, 1917, 2034, 2910
BseBI	CCWGG	3 cut(s)	1038, 2535, 2553
BseCI	ATCGAT	1 cut(s)	2223
BseDI	CCNNGG	6 cut(s)	264, 336, 1055, 1761, 2388, 2503
BseGI	GGATG	4 cut(s)	475, 622, 1228, 1405
BseLI	CCNNNNNNNGG	8 cut(s)	1001, 1081, 1337, 1828, 2498, 2578, 2834, 2878
BseMI	GCAATG	6 cut(s)	420, 537, 587, 1917, 2034, 2910
BseMII	CTCAG	8 cut(s)	156, 182, 429, 1118, 1926, 2331, 2615, 2946
BseNI	ACTGG	8 cut(s)	385, 573, 796, 1075, 1882, 2293, 2572, 2718
BseSI	GKGCMC	4 cut(s)	743, 1458, 1974, 2240
BsgI	GTGCAG	2 cut(s)	306, 882
Bsh1236I	CGCG	6 cut(s)	105, 207, 234, 459, 1716, 1956
Bsh1285I	CGRYCG	2 cut(s)	205, 2227
BshFI	GGCC	9 cut(s)	335, 1127, 1473, 1504, 1733, 1947, 2396, 2502, 2624
BshNI	GGYRCC	3 cut(s)	571, 1453, 2950
BshVI	ATCGAT	1 cut(s)	2223
BsiEI	CGRYCG	2 cut(s)	205, 2227
BsiHKAI	GWGCWC	6 cut(s)	163, 743, 1105, 1195, 1974, 2602
BsiHKCI	CYCGRG	1 cut(s)	1457
BsiSI	CCGG	3 cut(s)	36, 218, 1055
BslFI	GGGAC	5 cut(s)	122, 128, 802, 1625, 2299
BslI	CCNNNNNNNGG	8 cut(s)	1001, 1081, 1337, 1828, 2498, 2578, 2834, 2878
BsmAI	GTCTC	1 cut(s)	2734
BsmFI	GGGAC	5 cut(s)	122, 128, 802, 1625, 2299
BsmI	GAATGC	4 cut(s)	219, 412, 592, 1909
BsnI	GGCC	9 cut(s)	335, 1127, 1473, 1504, 1733, 1947, 2396, 2502, 2624
BsoBI	CYCGRG	1 cut(s)	1457
Bsp119I	TTCGAA	1 cut(s)	2783
Bsp68I	TCGCGA	1 cut(s)	105
BspANI	GGCC	9 cut(s)	335, 1127, 1473, 1504, 1733, 1947, 2396, 2502, 2624
BspCNI	CTCAG	8 cut(s)	155, 181, 430, 1117, 1927, 2332, 2614, 2947
BspDI	ATCGAT	1 cut(s)	2223
BspFNI	CGCG	6 cut(s)	105, 207, 234, 459, 1716, 1956
BspHI	TCATGA	2 cut(s)	1297, 2794
BspMAI	CTGCAG	2 cut(s)	835, 2332
BspPI	GGATC	7 cut(s)	46, 1150, 1380, 1393, 1665, 2647, 2890
BspT104I	TTCGAA	1 cut(s)	2783
BspT107I	GGYRCC	3 cut(s)	571, 1453, 2950
BsrDI	GCAATG	6 cut(s)	420, 537, 587, 1917, 2034, 2910
BsrI	ACTGG	8 cut(s)	385, 573, 796, 1075, 1882, 2293, 2572, 2718
BssECI	CCNNGG	6 cut(s)	264, 336, 1055, 1761, 2388, 2503
BssNI	GRCGYC	2 cut(s)	95, 1740
BssT1I	CCWWGG	4 cut(s)	264, 1761, 2388, 2503
Bst2UI	CCWGG	3 cut(s)	1038, 2535, 2553
Bst4CI	ACNGT	7 cut(s)	504, 940, 1135, 1250, 2026, 2437, 2632
Bst6I	CTCTTC	2 cut(s)	1428, 2247
BstACI	GRCGYC	2 cut(s)	95, 1740
BstAPI	GCANNNNNTGC	2 cut(s)	905, 2858
BstBAI	YACGTR	1 cut(s)	1543
BstBI	TTCGAA	1 cut(s)	2783
BstC8I	GCNNGC	4 cut(s)	318, 765, 1700, 2262
BstEII	GGTNACC	1 cut(s)	2812
BstF5I	GGATG	4 cut(s)	475, 622, 1228, 1405
BstFNI	CGCG	6 cut(s)	105, 207, 234, 459, 1716, 1956
BstHHI	GCGC	5 cut(s)	236, 459, 1660, 1716, 1956
BstMAI	GTCTC	1 cut(s)	2734
BstMCI	CGRYCG	2 cut(s)	205, 2227
BstNI	CCWGG	3 cut(s)	1038, 2535, 2553
BstNSI	RCATGY	2 cut(s)	757, 2093
BstPI	GGTNACC	1 cut(s)	2812
BstSCI	CCNGG	4 cut(s)	1036, 1054, 2533, 2551
BstSFI	CTRYAG	4 cut(s)	297, 831, 1794, 2328
BstSLI	GKGCMC	4 cut(s)	743, 1458, 1974, 2240
BstSNI	TACGTA	1 cut(s)	1543
BstUI	CGCG	6 cut(s)	105, 207, 234, 459, 1716, 1956
BstV2I	GAAGAC	1 cut(s)	498
BstX2I	RGATCY	3 cut(s)	1142, 1385, 1670
BstYI	RGATCY	3 cut(s)	1142, 1385, 1670
Bsu15I	ATCGAT	1 cut(s)	2223
BsuRI	GGCC	9 cut(s)	335, 1127, 1473, 1504, 1733, 1947, 2396, 2502, 2624
BsuTUI	ATCGAT	1 cut(s)	2223
BtgZI	GCGATG	2 cut(s)	20, 563
BtrI	CACGTC	1 cut(s)	1320
BtsCI	GGATG	4 cut(s)	475, 622, 1228, 1405
BtsI	GCAGTG	2 cut(s)	1888, 2052
BtsIMutI	CAGTG	5 cut(s)	1082, 1304, 1888, 2052, 2579
BtuMI	TCGCGA	1 cut(s)	105
Cac8I	GCNNGC	4 cut(s)	318, 765, 1700, 2262
CaiI	CAGNNNCTG	1 cut(s)	842
CciI	TCATGA	2 cut(s)	1297, 2794
CfoI	GCGC	5 cut(s)	236, 459, 1660, 1716, 1956
Cfr13I	GGNCC	8 cut(s)	125, 992, 1472, 1622, 1731, 2395, 2489, 2969
ClaI	ATCGAT	1 cut(s)	2223
CseI	GACGC	4 cut(s)	52, 654, 1581, 1729
Csp6I	GTAC	7 cut(s)	10, 572, 777, 1540, 2145, 2274, 2442
CviQI	GTAC	7 cut(s)	10, 572, 777, 1540, 2145, 2274, 2442
DraIII	CACNNNGTG	3 cut(s)	773, 1001, 2498
EaeI	YGGCCR	5 cut(s)	333, 1125, 1502, 1945, 2622
Eam1104I	CTCTTC	2 cut(s)	1428, 2247
EarI	CTCTTC	2 cut(s)	1428, 2247
EciI	GGCGGA	1 cut(s)	2652
Ecl136II	GAGCTC	1 cut(s)	161
Eco105I	TACGTA	1 cut(s)	1543
Eco130I	CCWWGG	4 cut(s)	264, 1761, 2388, 2503
Eco24I	GRGCYC	3 cut(s)	163, 931, 2428
Eco32I	GATATC	1 cut(s)	193
Eco47I	GGWCC	5 cut(s)	125, 992, 1622, 2489, 2969
Eco53kI	GAGCTC	1 cut(s)	161
Eco57I	CTGAAG	1 cut(s)	1623
Eco88I	CYCGRG	1 cut(s)	1457
Eco91I	GGTNACC	1 cut(s)	2812
EcoICRI	GAGCTC	1 cut(s)	161
EcoO65I	GGTNACC	1 cut(s)	2812
EcoRI	GAATTC	2 cut(s)	2117, 2757
EcoRII	CCWGG	3 cut(s)	1036, 2533, 2551
EcoRV	GATATC	1 cut(s)	193
EcoT14I	CCWWGG	4 cut(s)	264, 1761, 2388, 2503
EcoT22I	ATGCAT	2 cut(s)	1228, 2725
EcoT38I	GRGCYC	3 cut(s)	163, 931, 2428
ErhI	CCWWGG	4 cut(s)	264, 1761, 2388, 2503
FaqI	GGGAC	5 cut(s)	122, 128, 802, 1625, 2299
FauI	CCCGC	2 cut(s)	1828, 1949
FbaI	TGATCA	1 cut(s)	1786
FokI	GGATG	4 cut(s)	462, 629, 1235, 1412
FriOI	GRGCYC	3 cut(s)	163, 931, 2428
FspBI	CTAG	5 cut(s)	921, 1188, 2418, 2685, 2925
GlaI	GCGC	5 cut(s)	235, 458, 1659, 1715, 1955
GsuI	CTGGAG	1 cut(s)	100
HaeIII	GGCC	9 cut(s)	335, 1127, 1473, 1504, 1733, 1947, 2396, 2502, 2624
HapII	CCGG	3 cut(s)	36, 218, 1055
HgaI	GACGC	4 cut(s)	52, 654, 1581, 1729
HhaI	GCGC	5 cut(s)	236, 459, 1660, 1716, 1956
Hin1I	GRCGYC	2 cut(s)	95, 1740
Hin6I	GCGC	5 cut(s)	234, 457, 1658, 1714, 1954
HinP1I	GCGC	5 cut(s)	234, 457, 1658, 1714, 1954
HincII	GTYRAC	4 cut(s)	51, 493, 1066, 1990
HindII	GTYRAC	4 cut(s)	51, 493, 1066, 1990
HindIII	AAGCTT	1 cut(s)	888
HpaI	GTTAAC	3 cut(s)	51, 493, 1066
HpaII	CCGG	3 cut(s)	36, 218, 1055
HphI	GGTGA	7 cut(s)	280, 724, 859, 1022, 1777, 2519, 2824
Hpy99I	CGWCG	3 cut(s)	46, 97, 100
HpyAV	CCTTC	9 cut(s)	247, 802, 1054, 1376, 1390, 1647, 1795, 2299, 2887
HpyCH4III	ACNGT	7 cut(s)	504, 940, 1135, 1250, 2026, 2437, 2632
HpyCH4IV	ACGT	9 cut(s)	12, 95, 976, 1319, 1542, 2143, 2473, 2494, 2664
HpySE526I	ACGT	9 cut(s)	12, 95, 976, 1319, 1542, 2143, 2473, 2494, 2664
Hsp92I	GRCGYC	2 cut(s)	95, 1740
HspAI	GCGC	5 cut(s)	234, 457, 1658, 1714, 1954
KpnI	GGTACC	1 cut(s)	575
Ksp22I	TGATCA	1 cut(s)	1786
KspAI	GTTAAC	3 cut(s)	51, 493, 1066
LmnI	GCTCC	5 cut(s)	158, 220, 926, 1655, 2423
MaeI	CTAG	5 cut(s)	921, 1188, 2418, 2685, 2925
MaeII	ACGT	9 cut(s)	12, 95, 976, 1319, 1542, 2143, 2473, 2494, 2664
MflI	RGATCY	3 cut(s)	1142, 1385, 1670
MlsI	TGGCCA	3 cut(s)	1127, 1947, 2624
MluNI	TGGCCA	3 cut(s)	1127, 1947, 2624
MlyI	GAGTC	7 cut(s)	670, 741, 1310, 1657, 2167, 2238, 2807
MmeI	TCCRAC	1 cut(s)	594
Mox20I	TGGCCA	3 cut(s)	1127, 1947, 2624
Mph1103I	ATGCAT	2 cut(s)	1228, 2725
MroXI	GAANNNNTTC	1 cut(s)	1017
MscI	TGGCCA	3 cut(s)	1127, 1947, 2624
MslI	CAYNNNNRTG	2 cut(s)	480, 1977
Msp20I	TGGCCA	3 cut(s)	1127, 1947, 2624
MspA1I	CMGCKG	6 cut(s)	437, 545, 763, 1934, 2333, 2855
MspI	CCGG	3 cut(s)	36, 218, 1055
MspR9I	CCNGG	4 cut(s)	1038, 1056, 2535, 2553
Mva1269I	GAATGC	4 cut(s)	219, 412, 592, 1909
MvaI	CCWGG	3 cut(s)	1038, 2535, 2553
MvnI	CGCG	6 cut(s)	105, 207, 234, 459, 1716, 1956
NciI	CCSGG	1 cut(s)	1056
NmeAIII	GCCGAG	1 cut(s)	361
NmuCI	GTSAC	5 cut(s)	865, 1302, 1315, 2648, 2812
NruI	TCGCGA	1 cut(s)	105
NsiI	ATGCAT	2 cut(s)	1228, 2725
NspI	RCATGY	2 cut(s)	757, 2093
NspV	TTCGAA	1 cut(s)	2783
PagI	TCATGA	2 cut(s)	1297, 2794
PciI	ACATGT	1 cut(s)	753
PctI	GAATGC	4 cut(s)	219, 412, 592, 1909
PdmI	GAANNNNTTC	1 cut(s)	1017
PfeI	GAWTC	8 cut(s)	723, 1281, 1327, 1477, 1586, 2102, 2220, 2824
PflFI	GACNNNGTC	1 cut(s)	1985
PflMI	CCANNNNNTGG	3 cut(s)	1001, 1828, 2498
Ple19I	CGATCG	1 cut(s)	2227
PleI	GAGTC	7 cut(s)	670, 740, 1309, 1657, 2167, 2237, 2806
PpsI	GAGTC	7 cut(s)	670, 740, 1309, 1657, 2167, 2237, 2806
Ppu21I	YACGTR	1 cut(s)	1543
PscI	ACATGT	1 cut(s)	753
Psp124BI	GAGCTC	1 cut(s)	163
Psp6I	CCWGG	3 cut(s)	1036, 2533, 2551
PspEI	GGTNACC	1 cut(s)	2812
PspGI	CCWGG	3 cut(s)	1036, 2533, 2551
PspPI	GGNCC	8 cut(s)	125, 992, 1472, 1622, 1731, 2395, 2489, 2969
PstI	CTGCAG	2 cut(s)	835, 2332
PstNI	CAGNNNCTG	1 cut(s)	842
PsuI	RGATCY	3 cut(s)	1142, 1385, 1670
PsyI	GACNNNGTC	1 cut(s)	1985
PvuI	CGATCG	1 cut(s)	2227
PvuII	CAGCTG	4 cut(s)	437, 545, 763, 1934
RruI	TCGCGA	1 cut(s)	105
RsaI	GTAC	7 cut(s)	11, 573, 778, 1541, 2146, 2275, 2443
RsaNI	GTAC	7 cut(s)	10, 572, 777, 1540, 2145, 2274, 2442
RseI	CAYNNNNRTG	2 cut(s)	480, 1977
SacI	GAGCTC	1 cut(s)	163
Sau96I	GGNCC	8 cut(s)	125, 992, 1472, 1622, 1731, 2395, 2489, 2969
SchI	GAGTC	7 cut(s)	670, 741, 1310, 1657, 2167, 2238, 2807
ScrFI	CCNGG	4 cut(s)	1038, 1056, 2535, 2553
SfcI	CTRYAG	4 cut(s)	297, 831, 1794, 2328
SfuI	TTCGAA	1 cut(s)	2783
SinI	GGWCC	5 cut(s)	125, 992, 1622, 2489, 2969
SmiMI	CAYNNNNRTG	2 cut(s)	480, 1977
SmlI	CTYRAG	1 cut(s)	248
SmoI	CTYRAG	1 cut(s)	248
SnaBI	TACGTA	1 cut(s)	1543
SpeI	ACTAGT	3 cut(s)	920, 2417, 2924
SspMI	CTAG	5 cut(s)	921, 1188, 2418, 2685, 2925
SstI	GAGCTC	1 cut(s)	163
StyD4I	CCNGG	4 cut(s)	1036, 1054, 2533, 2551
StyI	CCWWGG	4 cut(s)	264, 1761, 2388, 2503
TaaI	ACNGT	7 cut(s)	504, 940, 1135, 1250, 2026, 2437, 2632
TaiI	ACGT	9 cut(s)	15, 98, 979, 1322, 1545, 2146, 2476, 2497, 2667
TaqI	TCGA	8 cut(s)	41, 92, 189, 726, 1686, 2223, 2227, 2783
TaqII	GACCGA	1 cut(s)	2957
TauI	GCSGC	7 cut(s)	201, 462, 699, 1358, 2196, 2396, 2852
TfiI	GAWTC	8 cut(s)	723, 1281, 1327, 1477, 1586, 2102, 2220, 2824
TscAI	CASTG	5 cut(s)	1082, 1311, 1888, 2052, 2579
TseFI	GTSAC	5 cut(s)	865, 1302, 1315, 2648, 2812
Tsp45I	GTSAC	5 cut(s)	865, 1302, 1315, 2648, 2812
TspGWI	ACGGA	1 cut(s)	50
TspRI	CASTG	5 cut(s)	1082, 1311, 1888, 2052, 2579
Tth111I	GACNNNGTC	1 cut(s)	1985
Van91I	CCANNNNNTGG	3 cut(s)	1001, 1828, 2498
VneI	GTGCAC	2 cut(s)	739, 1970
VpaK11BI	GGWCC	5 cut(s)	125, 992, 1622, 2489, 2969
XapI	RAATTY	8 cut(s)	559, 577, 1681, 2056, 2117, 2757, 2778, 2933
XceI	RCATGY	2 cut(s)	757, 2093
XcmI	CCANNNNNNNNNTGG	4 cut(s)	271, 369, 1768, 1866
XmnI	GAANNNNTTC	1 cut(s)	1017
XspI	CTAG	5 cut(s)	921, 1188, 2418, 2685, 2925
ZraI	GACGTC	1 cut(s)	96
Zsp2I	ATGCAT	2 cut(s)	1228, 2725

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.