No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g31620 |
| malus_domestica | MD15G1056900.v1.1 |
| prunus_persica | Prupe.1G409500_v2.0.a1 |
| pyrus_communis | pycom08g05300 pycom15g05330 |
| rosa_chinensis | RchiOBHm_Chr6g0311201 |
| rosa_laevigata | RLG00000010428 |
| rosa_multiflora | Rmu_co8149324.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00157910 |
| rosa_rugosa | Rorug06G0386300 |
| rosa_samantha | Rh6AG500500 Rh6BG511100 Rh6CG516900 Rh6DG503400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 869 |
| AfaI | GTAC | 2 cut(s) | 166, 595 |
| AflIII | ACRYGT | 1 cut(s) | 805 |
| AgsI | TTSAA | 2 cut(s) | 812, 855 |
| AluBI | AGCT | 2 cut(s) | 426, 783 |
| AluI | AGCT | 2 cut(s) | 426, 783 |
| Alw21I | GWGCWC | 1 cut(s) | 890 |
| Alw26I | GTCTC | 1 cut(s) | 796 |
| Alw44I | GTGCAC | 1 cut(s) | 886 |
| AlwI | GGATC | 1 cut(s) | 869 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 880 |
| Ama87I | CYCGRG | 1 cut(s) | 797 |
| ApaLI | GTGCAC | 1 cut(s) | 886 |
| AspLEI | GCGC | 1 cut(s) | 779 |
| AspS9I | GGNCC | 1 cut(s) | 848 |
| AsuC2I | CCSGG | 1 cut(s) | 210 |
| AsuHPI | GGTGA | 7 cut(s) | 127, 406, 412, 538, 580, 706, 748 |
| AvaI | CYCGRG | 1 cut(s) | 797 |
| AvaII | GGWCC | 1 cut(s) | 848 |
| BaeGI | GKGCMC | 1 cut(s) | 890 |
| Bbv12I | GWGCWC | 1 cut(s) | 890 |
| BccI | CCATC | 8 cut(s) | 140, 242, 419, 425, 551, 593, 719, 761 |
| BcnI | CCSGG | 1 cut(s) | 210 |
| BcoDI | GTCTC | 1 cut(s) | 796 |
| BfaI | CTAG | 4 cut(s) | 168, 195, 261, 282 |
| BfoI | RGCGCY | 1 cut(s) | 780 |
| BmcAI | AGTACT | 1 cut(s) | 166 |
| Bme1390I | CCNGG | 1 cut(s) | 210 |
| Bme18I | GGWCC | 1 cut(s) | 848 |
| BmeT110I | CYCGRG | 1 cut(s) | 797 |
| BmgT120I | GGNCC | 1 cut(s) | 848 |
| BmrFI | CCNGG | 1 cut(s) | 210 |
| BmsI | GCATC | 1 cut(s) | 780 |
| BpuMI | CCSGG | 1 cut(s) | 210 |
| BsaJI | CCNNGG | 1 cut(s) | 208 |
| Bse118I | RCCGGY | 7 cut(s) | 104, 173, 242, 338, 437, 521, 605 |
| Bse1I | ACTGG | 7 cut(s) | 151, 358, 478, 591, 646, 751, 874 |
| BseDI | CCNNGG | 1 cut(s) | 208 |
| BseNI | ACTGG | 7 cut(s) | 151, 358, 478, 591, 646, 751, 874 |
| BseSI | GKGCMC | 1 cut(s) | 890 |
| BsiHKAI | GWGCWC | 1 cut(s) | 890 |
| BsiHKCI | CYCGRG | 1 cut(s) | 797 |
| BsiSI | CCGG | 8 cut(s) | 105, 174, 210, 243, 339, 438, 522, 606 |
| BslFI | GGGAC | 1 cut(s) | 862 |
| BsmAI | GTCTC | 1 cut(s) | 796 |
| BsmFI | GGGAC | 1 cut(s) | 862 |
| BsoBI | CYCGRG | 1 cut(s) | 797 |
| Bsp1286I | GDGCHC | 1 cut(s) | 890 |
| Bsp143I | GATC | 1 cut(s) | 861 |
| BspPI | GGATC | 1 cut(s) | 869 |
| BsrFI | RCCGGY | 7 cut(s) | 104, 173, 242, 338, 437, 521, 605 |
| BsrI | ACTGG | 7 cut(s) | 151, 358, 478, 591, 646, 751, 874 |
| BssAI | RCCGGY | 7 cut(s) | 104, 173, 242, 338, 437, 521, 605 |
| BssECI | CCNNGG | 1 cut(s) | 208 |
| BssMI | GATC | 1 cut(s) | 861 |
| Bst4CI | ACNGT | 4 cut(s) | 164, 379, 499, 667 |
| BstC8I | GCNNGC | 2 cut(s) | 781, 868 |
| BstH2I | RGCGCY | 1 cut(s) | 780 |
| BstHHI | GCGC | 1 cut(s) | 779 |
| BstKTI | GATC | 1 cut(s) | 864 |
| BstMAI | GTCTC | 1 cut(s) | 796 |
| BstMBI | GATC | 1 cut(s) | 861 |
| BstSCI | CCNGG | 1 cut(s) | 208 |
| BstSLI | GKGCMC | 1 cut(s) | 890 |
| BtsI | GCAGTG | 1 cut(s) | 888 |
| BtsIMutI | CAGTG | 6 cut(s) | 201, 351, 471, 639, 744, 888 |
| Cac8I | GCNNGC | 2 cut(s) | 781, 868 |
| CaiI | CAGNNNCTG | 1 cut(s) | 880 |
| CfoI | GCGC | 1 cut(s) | 779 |
| Cfr10I | RCCGGY | 7 cut(s) | 104, 173, 242, 338, 437, 521, 605 |
| Cfr13I | GGNCC | 1 cut(s) | 848 |
| Csp6I | GTAC | 2 cut(s) | 165, 594 |
| CviAII | CATG | 2 cut(s) | 43, 85 |
| CviJI | RGCY | 3 cut(s) | 426, 783, 842 |
| CviKI_1 | RGCY | 3 cut(s) | 426, 783, 842 |
| CviQI | GTAC | 2 cut(s) | 165, 594 |
| DpnI | GATC | 1 cut(s) | 863 |
| DpnII | GATC | 1 cut(s) | 861 |
| Eco47I | GGWCC | 1 cut(s) | 848 |
| Eco88I | CYCGRG | 1 cut(s) | 797 |
| FaeI | CATG | 2 cut(s) | 46, 88 |
| FaiI | YATR | 3 cut(s) | 44, 86, 786 |
| FaqI | GGGAC | 1 cut(s) | 862 |
| FatI | CATG | 2 cut(s) | 42, 84 |
| FspBI | CTAG | 4 cut(s) | 168, 195, 261, 282 |
| GlaI | GCGC | 1 cut(s) | 778 |
| HaeII | RGCGCY | 1 cut(s) | 780 |
| HapII | CCGG | 8 cut(s) | 105, 174, 210, 243, 339, 438, 522, 606 |
| HhaI | GCGC | 1 cut(s) | 779 |
| Hin1II | CATG | 2 cut(s) | 46, 88 |
| Hin6I | GCGC | 1 cut(s) | 777 |
| HinP1I | GCGC | 1 cut(s) | 777 |
| HpaII | CCGG | 8 cut(s) | 105, 174, 210, 243, 339, 438, 522, 606 |
| HphI | GGTGA | 7 cut(s) | 127, 406, 412, 538, 580, 706, 748 |
| Hpy166II | GTNNAC | 2 cut(s) | 848, 888 |
| Hpy8I | GTNNAC | 2 cut(s) | 848, 888 |
| HpyAV | CCTTC | 2 cut(s) | 843, 861 |
| HpyCH4III | ACNGT | 4 cut(s) | 164, 379, 499, 667 |
| HpyCH4IV | ACGT | 1 cut(s) | 807 |
| HpyCH4V | TGCA | 2 cut(s) | 828, 888 |
| HpySE526I | ACGT | 1 cut(s) | 807 |
| Hsp92II | CATG | 2 cut(s) | 46, 88 |
| HspAI | GCGC | 1 cut(s) | 777 |
| Kzo9I | GATC | 1 cut(s) | 861 |
| LmnI | GCTCC | 1 cut(s) | 431 |
| LweI | GCATC | 1 cut(s) | 780 |
| MaeI | CTAG | 4 cut(s) | 168, 195, 261, 282 |
| MaeII | ACGT | 1 cut(s) | 807 |
| MalI | GATC | 1 cut(s) | 863 |
| MboI | GATC | 1 cut(s) | 861 |
| MhlI | GDGCHC | 1 cut(s) | 890 |
| MluCI | AATT | 1 cut(s) | 856 |
| MseI | TTAA | 1 cut(s) | 312 |
| MslI | CAYNNNNRTG | 2 cut(s) | 41, 83 |
| MspI | CCGG | 8 cut(s) | 105, 174, 210, 243, 339, 438, 522, 606 |
| MspR9I | CCNGG | 1 cut(s) | 210 |
| NciI | CCSGG | 1 cut(s) | 210 |
| NdeII | GATC | 1 cut(s) | 861 |
| NlaIII | CATG | 2 cut(s) | 46, 88 |
| PspPI | GGNCC | 1 cut(s) | 848 |
| PstNI | CAGNNNCTG | 1 cut(s) | 880 |
| RsaI | GTAC | 2 cut(s) | 166, 595 |
| RsaNI | GTAC | 2 cut(s) | 165, 594 |
| RseI | CAYNNNNRTG | 2 cut(s) | 41, 83 |
| SaqAI | TTAA | 1 cut(s) | 312 |
| Sau3AI | GATC | 1 cut(s) | 861 |
| Sau96I | GGNCC | 1 cut(s) | 848 |
| ScaI | AGTACT | 1 cut(s) | 166 |
| ScrFI | CCNGG | 1 cut(s) | 210 |
| SduI | GDGCHC | 1 cut(s) | 890 |
| SetI | ASST | 9 cut(s) | 320, 428, 446, 572, 614, 785, 810, 835, 853 |
| SfaNI | GCATC | 1 cut(s) | 780 |
| SinI | GGWCC | 1 cut(s) | 848 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 41, 83 |
| Sse9I | AATT | 1 cut(s) | 856 |
| SspMI | CTAG | 4 cut(s) | 168, 195, 261, 282 |
| StyD4I | CCNGG | 1 cut(s) | 208 |
| TaaI | ACNGT | 4 cut(s) | 164, 379, 499, 667 |
| TaiI | ACGT | 1 cut(s) | 810 |
| TaqI | TCGA | 1 cut(s) | 237 |
| TasI | AATT | 1 cut(s) | 856 |
| TatI | WGTACW | 1 cut(s) | 164 |
| Tru1I | TTAA | 1 cut(s) | 312 |
| Tru9I | TTAA | 1 cut(s) | 312 |
| TscAI | CASTG | 6 cut(s) | 208, 358, 478, 646, 751, 895 |
| TspRI | CASTG | 6 cut(s) | 208, 358, 478, 646, 751, 895 |
| VneI | GTGCAC | 1 cut(s) | 886 |
| VpaK11BI | GGWCC | 1 cut(s) | 848 |
| XspI | CTAG | 4 cut(s) | 168, 195, 261, 282 |
| ZrmI | AGTACT | 1 cut(s) | 166 |