No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g31620 |
| malus_domestica | MD15G1056900.v1.1 |
| prunus_persica | Prupe.1G409500_v2.0.a1 |
| pyrus_communis | pycom08g05300 pycom15g05330 |
| rosa_chinensis | RchiOBHm_Chr6g0311201 |
| rosa_laevigata | RLG00000010428 |
| rosa_multiflora | Rmu_co8149324.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00157910 |
| rosa_rugosa | Rorug06G0386300 |
| rosa_samantha | Rh6AG500500 Rh6BG511100 Rh6CG516900 Rh6DG503400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 237 |
| AclWI | GGATC | 2 cut(s) | 275, 387 |
| Alw26I | GTCTC | 1 cut(s) | 408 |
| AlwI | GGATC | 2 cut(s) | 275, 387 |
| AseI | ATTAAT | 1 cut(s) | 392 |
| AspS9I | GGNCC | 1 cut(s) | 270 |
| AsuC2I | CCSGG | 1 cut(s) | 191 |
| AvaII | GGWCC | 1 cut(s) | 270 |
| BbsI | GAAGAC | 1 cut(s) | 116 |
| BccI | CCATC | 1 cut(s) | 344 |
| BclI | TGATCA | 2 cut(s) | 229, 369 |
| BcnI | CCSGG | 1 cut(s) | 191 |
| BcoDI | GTCTC | 1 cut(s) | 408 |
| Bme1390I | CCNGG | 1 cut(s) | 191 |
| Bme18I | GGWCC | 1 cut(s) | 270 |
| BmgT120I | GGNCC | 1 cut(s) | 270 |
| BmrFI | CCNGG | 1 cut(s) | 191 |
| BpiI | GAAGAC | 1 cut(s) | 116 |
| BpuMI | CCSGG | 1 cut(s) | 191 |
| Bsa29I | ATCGAT | 1 cut(s) | 98 |
| BsaBI | GATNNNNATC | 1 cut(s) | 354 |
| BsaJI | CCNNGG | 1 cut(s) | 174 |
| Bse1I | ACTGG | 1 cut(s) | 250 |
| Bse3DI | GCAATG | 2 cut(s) | 272, 319 |
| Bse8I | GATNNNNATC | 1 cut(s) | 354 |
| BseCI | ATCGAT | 1 cut(s) | 98 |
| BseDI | CCNNGG | 1 cut(s) | 174 |
| BseGI | GGATG | 1 cut(s) | 111 |
| BseJI | GATNNNNATC | 1 cut(s) | 354 |
| BseMI | GCAATG | 2 cut(s) | 272, 319 |
| BseNI | ACTGG | 1 cut(s) | 250 |
| BshVI | ATCGAT | 1 cut(s) | 98 |
| BsiSI | CCGG | 1 cut(s) | 191 |
| BsmAI | GTCTC | 1 cut(s) | 408 |
| Bsp143I | GATC | 8 cut(s) | 114, 229, 280, 298, 334, 355, 369, 379 |
| BspACI | CCGC | 1 cut(s) | 237 |
| BspDI | ATCGAT | 1 cut(s) | 98 |
| BspPI | GGATC | 2 cut(s) | 275, 387 |
| BsrDI | GCAATG | 2 cut(s) | 272, 319 |
| BsrI | ACTGG | 1 cut(s) | 250 |
| BssECI | CCNNGG | 1 cut(s) | 174 |
| BssMI | GATC | 8 cut(s) | 114, 229, 280, 298, 334, 355, 369, 379 |
| BssT1I | CCWWGG | 1 cut(s) | 174 |
| Bst4CI | ACNGT | 1 cut(s) | 260 |
| BstF5I | GGATG | 1 cut(s) | 111 |
| BstKTI | GATC | 8 cut(s) | 117, 232, 283, 301, 337, 358, 372, 382 |
| BstMAI | GTCTC | 1 cut(s) | 408 |
| BstMBI | GATC | 8 cut(s) | 114, 229, 280, 298, 334, 355, 369, 379 |
| BstSCI | CCNGG | 1 cut(s) | 189 |
| BstV2I | GAAGAC | 1 cut(s) | 116 |
| Bsu15I | ATCGAT | 1 cut(s) | 98 |
| BsuTUI | ATCGAT | 1 cut(s) | 98 |
| BtsCI | GGATG | 1 cut(s) | 111 |
| Cfr13I | GGNCC | 1 cut(s) | 270 |
| ClaI | ATCGAT | 1 cut(s) | 98 |
| CviAII | CATG | 1 cut(s) | 70 |
| CviJI | RGCY | 1 cut(s) | 194 |
| CviKI_1 | RGCY | 1 cut(s) | 194 |
| DpnI | GATC | 8 cut(s) | 116, 231, 282, 300, 336, 357, 371, 381 |
| DpnII | GATC | 8 cut(s) | 114, 229, 280, 298, 334, 355, 369, 379 |
| Eco130I | CCWWGG | 1 cut(s) | 174 |
| Eco47I | GGWCC | 1 cut(s) | 270 |
| EcoT14I | CCWWGG | 1 cut(s) | 174 |
| ErhI | CCWWGG | 1 cut(s) | 174 |
| FaeI | CATG | 1 cut(s) | 73 |
| FaiI | YATR | 2 cut(s) | 71, 119 |
| FatI | CATG | 1 cut(s) | 69 |
| FbaI | TGATCA | 2 cut(s) | 229, 369 |
| FokI | GGATG | 1 cut(s) | 118 |
| HapII | CCGG | 1 cut(s) | 191 |
| Hin1II | CATG | 1 cut(s) | 73 |
| HinfI | GANTC | 3 cut(s) | 32, 95, 170 |
| HpaII | CCGG | 1 cut(s) | 191 |
| Hpy188I | TCNGA | 4 cut(s) | 234, 246, 379, 413 |
| Hpy188III | TCNNGA | 2 cut(s) | 296, 383 |
| HpyAV | CCTTC | 1 cut(s) | 283 |
| HpyCH4III | ACNGT | 1 cut(s) | 260 |
| HpyCH4V | TGCA | 1 cut(s) | 290 |
| Hsp92II | CATG | 1 cut(s) | 73 |
| Ksp22I | TGATCA | 2 cut(s) | 229, 369 |
| Kzo9I | GATC | 8 cut(s) | 114, 229, 280, 298, 334, 355, 369, 379 |
| LpnPI | CCDG | 5 cut(s) | 74, 156, 204, 263, 309 |
| MalI | GATC | 8 cut(s) | 116, 231, 282, 300, 336, 357, 371, 381 |
| MboI | GATC | 8 cut(s) | 114, 229, 280, 298, 334, 355, 369, 379 |
| MboII | GAAGA | 7 cut(s) | 104, 121, 158, 161, 192, 318, 398 |
| MluCI | AATT | 3 cut(s) | 240, 291, 389 |
| MlyI | GAGTC | 1 cut(s) | 41 |
| MseI | TTAA | 2 cut(s) | 255, 392 |
| MspI | CCGG | 1 cut(s) | 191 |
| MspR9I | CCNGG | 1 cut(s) | 191 |
| NciI | CCSGG | 1 cut(s) | 191 |
| NdeII | GATC | 8 cut(s) | 114, 229, 280, 298, 334, 355, 369, 379 |
| NlaIII | CATG | 1 cut(s) | 73 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 80 |
| PfeI | GAWTC | 2 cut(s) | 95, 170 |
| PleI | GAGTC | 1 cut(s) | 40 |
| PpsI | GAGTC | 1 cut(s) | 40 |
| PshBI | ATTAAT | 1 cut(s) | 392 |
| PspPI | GGNCC | 1 cut(s) | 270 |
| SaqAI | TTAA | 2 cut(s) | 255, 392 |
| Sau3AI | GATC | 8 cut(s) | 114, 229, 280, 298, 334, 355, 369, 379 |
| Sau96I | GGNCC | 1 cut(s) | 270 |
| SchI | GAGTC | 1 cut(s) | 41 |
| ScrFI | CCNGG | 1 cut(s) | 191 |
| SinI | GGWCC | 1 cut(s) | 270 |
| Sse9I | AATT | 3 cut(s) | 240, 291, 389 |
| SsiI | CCGC | 1 cut(s) | 237 |
| StyD4I | CCNGG | 1 cut(s) | 189 |
| StyI | CCWWGG | 1 cut(s) | 174 |
| TaaI | ACNGT | 1 cut(s) | 260 |
| TaqI | TCGA | 1 cut(s) | 98 |
| TasI | AATT | 3 cut(s) | 240, 291, 389 |
| TfiI | GAWTC | 2 cut(s) | 95, 170 |
| Tru1I | TTAA | 2 cut(s) | 255, 392 |
| Tru9I | TTAA | 2 cut(s) | 255, 392 |
| TspDTI | ATGAA | 2 cut(s) | 122, 265 |
| VpaK11BI | GGWCC | 1 cut(s) | 270 |
| VspI | ATTAAT | 1 cut(s) | 392 |