Rorug06G0405400

General negative regulator of transcription subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0006861
Physical Location & Seq
Forward (+)
54913506 .. 54915631
2126 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0405400.1

Sequence Viewer

Length: 1611 bp
ATGGAAATTTTCGTTCTTCCATACCTAAATACCGGCGCTACAGCTGGGCTCTCACTTGCCATACTTGTGTTTTCCTACTTTATCCTAACTAAGAGGTCCCGAGCCAATAGGAGTCCCAAACCCCCTCAAGTCTCAGGTGGATGGCCTCTGTTAGGCCATCTCCACCTCCTTGGAGGATCCAAGCAGCTTCCCCATATAACCTTGGGAGCCTTGACCGACAAGTATGGACCAATCTTCACCATCAATATTGGCATCCACTCCACTCTTGTGTTAAATACTTGGGAAGCGGCCAAGGAATGTTTCACCACCAACGACTCGGTTGTTTCCTCCCGTCCCGCTACGATAGCTGCCAAACACTTGAGCTACAACTATGCCATGTTCGGATTTGGCCCCTACGGTCCATACTGGCGTGAAATACGCAAGTTGACATCCCAAGAGCTACTCTCAAACAGCAGGCTCGAGCTACTCAAACATGTTCGGGTATCCGAAGTAGAGATGAGTTTGAAACAGTTATACAAGCTATGGAGCCAAAGAAAAGATACAATCAGCACCAGCACGGGCCAAGTTTCGGTGGAGATGAAGCAGTGGTTTGGGGATTTGACACTAAACGTGGTTTTAAGGATGATTGCTGGAAAGCGATACTTCAATGTCGCTGATGGTAATTTGACCGACGAAAAAGAGGCACGACGGTGCCAAAAGGCCGTGAGGGGGTTCTTCCATTTGGTGGGAGTTTTTGTGTTGGGTGATGCAGTTCCATGGCTCAAGTGGTGGGATTTAGGTGGGCAGCAGAAGGCTATGAAAGACACTGCAAAGGAACTCGATCTTATAGCTATGGAGTGGTTGGAGGAGCACAAGCATAGAAGAACAACTTTGGGGAAGGCTAAAAGCGACCAAGATTTCATGGATGTGATGCTTTCCGTCCTTGATGGATCGCATGTTGCAGGGTTTGATGCTGATACCGTCGTTAAAGCAACATGTTTGGCTTTGTTATCTGGAGGCACTGACACAACAACGGTGACCCTAACGTGGGCGCTCTCACTGCTGTTAAACAACCCCCAAGCACTGAAGAAGGTCTATGAAGAACTAGACCATCAAGTTGGCAGAGAAAGATTAGTGAACGAATCAGATATAAACAACCTGGAGTATCTACAAGCCACTGTTAAAGAAGTAATGCGCTTATGCCCAGCTGGACCACTCTCTGGTCAGAGGGAAGTCACTGAGGACTGCACTGTTGGAGGGTACCATATCCCAAGAGGCACTTGGTTGATGGTCAACCTGTCGAAGGTCCAGACTGACCCGCGGGTTTGGGCCGACCCGATGGAGTTCAAGCCAGAGAGATTTCTCACCACCCATAAGGGTACTGATGTCAAGGGTCAGCATTTTGTGCTGATGCCATTTGGGAGTGGTCGAAGAGCTTGCCCTGGAATTACTTTTGGACTTCAAATGACCCTTTTGTCCCTGGCTGGTTTTCTTCAAGGTTTTGAGGTCTCAACTCCAGGGACCGAACCAGTTGACATGACTGGAAGCGTCGGACTTACAAACATGAAATCCACCCCACTTCGAGTTCTCGTCAAACCACGCTTGTCCCCAAATCTGTATCAATCAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0000278 GO:0000288 GO:0000289 GO:0000932 GO:0000956 GO:0001701 GO:0001824 GO:0001825 GO:0001829 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006977 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009790 GO:0009792 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010948 GO:0016070 GO:0016071 GO:0017148 GO:0019222 GO:0019439 GO:0022402 GO:0023051 GO:0023052 GO:0023057 GO:0030014 GO:0030015 GO:0030154 GO:0030330 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031570 GO:0031571 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032991 GO:0033143 GO:0033144 GO:0033146 GO:0033147 GO:0033554 GO:0034248 GO:0034249 GO:0034641 GO:0034655 GO:0035556 GO:0035770 GO:0036464 GO:0042770 GO:0043009 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0044773 GO:0044774 GO:0044783 GO:0044819 GO:0045786 GO:0045787 GO:0045930 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048646 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051239 GO:0051246 GO:0051248 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0071156 GO:0071158 GO:0071704 GO:0072331 GO:0072395 GO:0072401 GO:0072413 GO:0072422 GO:0072431 GO:0080090 GO:0090068 GO:0090304 GO:1901360 GO:1901361 GO:1901575 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902400 GO:1902402 GO:1902403 GO:1902806 GO:1902807 GO:1903047 GO:1990904 GO:2000036 GO:2000045 GO:2000112 GO:2000113 GO:2000134
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
NOT2_3_5 Not3

Protein Analysis

536

Amino Acids

59.73

Weight (kDa)

8.9

Isoelectric Point (pI)

33.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 42 - 512 7.7e-89 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1453
Acc65I GGTACC 1 cut(s) 1239
AccB1I GGYRCC 2 cut(s) 690, 1239
AccB7I CCANNNNNTGG 2 cut(s) 724, 1199
AccII CGCG 1 cut(s) 1300
AciI CCGC 4 cut(s) 287, 336, 1298, 1300
AclWI GGATC 3 cut(s) 171, 184, 937
AcoI YGGCCR 1 cut(s) 288
AcsI RAATTY 1 cut(s) 6
AcuI CTGAAG 1 cut(s) 1085
AfaI GTAC 2 cut(s) 1241, 1360
AfiI CCNNNNNNNGG 8 cut(s) 152, 568, 708, 724, 1026, 1027, 1199, 1282
AflIII ACRYGT 2 cut(s) 472, 974
AgsI TTSAA 5 cut(s) 505, 646, 1327, 1442, 1475
AjnI CCWGG 4 cut(s) 1137, 1420, 1458, 1495
AjuI GAANNNNNNNTTGG 2 cut(s) 284, 316
AleI CACNNNNGTG 2 cut(s) 266, 688
Alw21I GWGCWC 1 cut(s) 852
Alw26I GTCTC 2 cut(s) 136, 1492
AlwI GGATC 3 cut(s) 171, 184, 937
Ama87I CYCGRG 2 cut(s) 99, 458
AoxI GGCC 7 cut(s) 143, 154, 288, 388, 559, 699, 1308
ApeKI GCWGC 3 cut(s) 184, 347, 784
ApoI RAATTY 1 cut(s) 6
Asp718I GGTACC 1 cut(s) 1239
AspLEI GCGC 3 cut(s) 38, 1033, 1176
AspS9I GGNCC 9 cut(s) 96, 227, 389, 398, 559, 1190, 1285, 1308, 1500
AsuHPI GGTGA 5 cut(s) 229, 295, 755, 1027, 1336
AvaI CYCGRG 2 cut(s) 99, 458
AvaII GGWCC 6 cut(s) 96, 227, 398, 1190, 1285, 1500
BaeI ACNNNNGTAYC 4 cut(s) 948, 981, 1350, 1383
BamHI GGATCC 1 cut(s) 176
BanI GGYRCC 2 cut(s) 690, 1239
BanII GRGCYC 1 cut(s) 51
Bbv12I GWGCWC 1 cut(s) 852
BbvI GCAGC 3 cut(s) 196, 334, 796
BccI CCATC 8 cut(s) 135, 165, 248, 650, 920, 1098, 1261, 1312
BceAI ACGGC 1 cut(s) 686
BcgI CGANNNNNNTGC 2 cut(s) 1398, 1432
BciT130I CCWGG 4 cut(s) 1139, 1422, 1460, 1497
BciVI GTATCC 1 cut(s) 493
BcoDI GTCTC 2 cut(s) 136, 1492
BfaI CTAG 1 cut(s) 1085
BfmI CTRYAG 1 cut(s) 39
BfoI RGCGCY 2 cut(s) 39, 1034
BfuI GTATCC 1 cut(s) 493
BisI GCNGC 4 cut(s) 185, 288, 348, 785
BlsI GCNGC 4 cut(s) 186, 289, 349, 786
Bme1390I CCNGG 4 cut(s) 1139, 1422, 1460, 1497
Bme18I GGWCC 6 cut(s) 96, 227, 398, 1190, 1285, 1500
BmeT110I CYCGRG 2 cut(s) 99, 458
BmgT120I GGNCC 9 cut(s) 96, 227, 389, 398, 559, 1190, 1285, 1308, 1500
BmiI GGNNCC 8 cut(s) 98, 178, 208, 391, 527, 692, 1241, 1501
BmrFI CCNGG 4 cut(s) 1139, 1422, 1460, 1497
BmsI GCATC 5 cut(s) 261, 736, 900, 940, 1380
BplI GAGNNNNNCTC 2 cut(s) 428, 460
BpmI CTGGAG 3 cut(s) 1014, 1160, 1479
BpuEI CTTGAG 3 cut(s) 111, 379, 746
BsaI GGTCTC 1 cut(s) 1492
BsaJI CCNNGG 8 cut(s) 169, 201, 291, 755, 1298, 1420, 1458, 1496
BsaXI ACNNNNNCTCC 2 cut(s) 720, 750
Bsc4I CCNNNNNNNGG 8 cut(s) 152, 568, 708, 724, 1026, 1027, 1199, 1282
Bse118I RCCGGY 1 cut(s) 32
Bse1I ACTGG 3 cut(s) 410, 1508, 1525
BseBI CCWGG 4 cut(s) 1139, 1422, 1460, 1497
BseDI CCNNGG 8 cut(s) 169, 201, 291, 755, 1298, 1420, 1458, 1496
BseGI GGATG 5 cut(s) 146, 252, 428, 627, 910
BseLI CCNNNNNNNGG 8 cut(s) 152, 568, 708, 724, 1026, 1027, 1199, 1282
BseMII CTCAG 2 cut(s) 147, 1209
BseNI ACTGG 3 cut(s) 410, 1508, 1525
BseRI GAGGAG 1 cut(s) 860
BseXI GCAGC 3 cut(s) 196, 334, 796
BseYI CCCAGC 2 cut(s) 44, 1183
BsgI GTGCAG 1 cut(s) 1210
Bsh1236I CGCG 1 cut(s) 1300
BshFI GGCC 7 cut(s) 145, 156, 290, 390, 561, 701, 1310
BshNI GGYRCC 2 cut(s) 690, 1239
BsiHKAI GWGCWC 1 cut(s) 852
BsiHKCI CYCGRG 2 cut(s) 99, 458
BsiSI CCGG 1 cut(s) 33
BslFI GGGAC 6 cut(s) 82, 99, 318, 1441, 1513, 1570
BslI CCNNNNNNNGG 8 cut(s) 152, 568, 708, 724, 1026, 1027, 1199, 1282
BsmAI GTCTC 2 cut(s) 136, 1492
BsmFI GGGAC 6 cut(s) 82, 99, 318, 1441, 1513, 1570
BsnI GGCC 7 cut(s) 145, 156, 290, 390, 561, 701, 1310
Bso31I GGTCTC 1 cut(s) 1492
BsoBI CYCGRG 2 cut(s) 99, 458
Bsp1286I GDGCHC 2 cut(s) 51, 852
Bsp143I GATC 3 cut(s) 176, 820, 929
Bsp19I CCATGG 1 cut(s) 755
BspACI CCGC 4 cut(s) 287, 336, 1298, 1300
BspANI GGCC 7 cut(s) 145, 156, 290, 390, 561, 701, 1310
BspCNI CTCAG 2 cut(s) 146, 1210
BspFNI CGCG 1 cut(s) 1300
BspLI GGNNCC 8 cut(s) 98, 178, 208, 391, 527, 692, 1241, 1501
BspPI GGATC 3 cut(s) 171, 184, 937
BspQI GCTCTTC 1 cut(s) 1405
BspT107I GGYRCC 2 cut(s) 690, 1239
BspTNI GGTCTC 1 cut(s) 1492
BsrFI RCCGGY 1 cut(s) 32
BsrI ACTGG 3 cut(s) 410, 1508, 1525
BssAI RCCGGY 1 cut(s) 32
BssECI CCNNGG 8 cut(s) 169, 201, 291, 755, 1298, 1420, 1458, 1496
BssMI GATC 3 cut(s) 176, 820, 929
BssT1I CCWWGG 4 cut(s) 169, 201, 291, 755
Bst2UI CCWGG 4 cut(s) 1139, 1422, 1460, 1497
Bst4CI ACNGT 7 cut(s) 398, 510, 690, 961, 1015, 1159, 1231
Bst6I CTCTTC 1 cut(s) 1405
BstAPI GCANNNNNTGC 1 cut(s) 1384
BstC8I GCNNGC 2 cut(s) 455, 1417
BstDEI CTNAG 3 cut(s) 90, 133, 1218
BstDSI CCRYGG 2 cut(s) 755, 1298
BstEII GGTNACC 1 cut(s) 1015
BstENI CCTNNNNNAGG 2 cut(s) 150, 1280
BstF5I GGATG 5 cut(s) 146, 252, 428, 627, 910
BstFNI CGCG 1 cut(s) 1300
BstH2I RGCGCY 2 cut(s) 39, 1034
BstHHI GCGC 3 cut(s) 38, 1033, 1176
BstKTI GATC 3 cut(s) 179, 823, 932
BstMAI GTCTC 2 cut(s) 136, 1492
BstMBI GATC 3 cut(s) 176, 820, 929
BstMWI GCNNNNNNNGC 3 cut(s) 344, 1039, 1384
BstNI CCWGG 4 cut(s) 1139, 1422, 1460, 1497
BstNSI RCATGY 3 cut(s) 476, 938, 978
BstPI GGTNACC 1 cut(s) 1015
BstSCI CCNGG 4 cut(s) 1137, 1420, 1458, 1495
BstSFI CTRYAG 1 cut(s) 39
BstUI CGCG 1 cut(s) 1300
BstV1I GCAGC 3 cut(s) 196, 334, 796
BstX2I RGATCY 1 cut(s) 176
BstXI CCANNNNNNTGG 2 cut(s) 170, 1097
BstYI RGATCY 1 cut(s) 176
BsuI GTATCC 1 cut(s) 493
BsuRI GGCC 7 cut(s) 145, 156, 290, 390, 561, 701, 1310
BtgI CCRYGG 2 cut(s) 755, 1298
BtsCI GGATG 5 cut(s) 146, 252, 428, 627, 910
BtsI GCAGTG 3 cut(s) 590, 804, 1037
BtsIMutI CAGTG 8 cut(s) 590, 804, 999, 1037, 1061, 1155, 1215, 1227
Cac8I GCNNGC 2 cut(s) 455, 1417
CfoI GCGC 3 cut(s) 38, 1033, 1176
Cfr10I RCCGGY 1 cut(s) 32
Cfr13I GGNCC 9 cut(s) 96, 227, 389, 398, 559, 1190, 1285, 1308, 1500
Cfr42I CCGCGG 1 cut(s) 1301
CseI GACGC 1 cut(s) 1516
Csp6I GTAC 2 cut(s) 1240, 1359
CviAII CATG 8 cut(s) 376, 473, 756, 901, 935, 975, 1516, 1543
CviQI GTAC 2 cut(s) 1240, 1359
DdeI CTNAG 3 cut(s) 90, 133, 1218
DpnI GATC 3 cut(s) 178, 822, 931
DpnII GATC 3 cut(s) 176, 820, 929
DrdI GACNNNNNNGTC 1 cut(s) 1453
DseDI GACNNNNNNGTC 1 cut(s) 1453
EaeI YGGCCR 1 cut(s) 288
Eam1104I CTCTTC 1 cut(s) 1405
EarI CTCTTC 1 cut(s) 1405
Eco130I CCWWGG 4 cut(s) 169, 201, 291, 755
Eco24I GRGCYC 1 cut(s) 51
Eco31I GGTCTC 1 cut(s) 1492
Eco47I GGWCC 6 cut(s) 96, 227, 398, 1190, 1285, 1500
Eco57I CTGAAG 1 cut(s) 1085
Eco88I CYCGRG 2 cut(s) 99, 458
Eco91I GGTNACC 1 cut(s) 1015
EcoNI CCTNNNNNAGG 2 cut(s) 150, 1280
EcoO109I RGGNCCY 1 cut(s) 96
EcoO65I GGTNACC 1 cut(s) 1015
EcoRII CCWGG 4 cut(s) 1137, 1420, 1458, 1495
EcoT14I CCWWGG 4 cut(s) 169, 201, 291, 755
EcoT38I GRGCYC 1 cut(s) 51
ErhI CCWWGG 4 cut(s) 169, 201, 291, 755
FaeI CATG 8 cut(s) 379, 476, 759, 904, 938, 978, 1519, 1546
FalI AAGNNNNNCTT 6 cut(s) 626, 658, 853, 885, 1243, 1275
FaqI GGGAC 6 cut(s) 82, 99, 318, 1441, 1513, 1570
FatI CATG 8 cut(s) 375, 472, 755, 900, 934, 974, 1515, 1542
FauI CCCGC 3 cut(s) 343, 1293, 1305
Fnu4HI GCNGC 4 cut(s) 185, 288, 348, 785
FokI GGATG 5 cut(s) 153, 239, 415, 634, 917
FriOI GRGCYC 1 cut(s) 51
Fsp4HI GCNGC 4 cut(s) 185, 288, 348, 785
FspBI CTAG 1 cut(s) 1085
GlaI GCGC 3 cut(s) 37, 1032, 1175
GluI GCNGC 4 cut(s) 185, 288, 348, 785
GsaI CCCAGC 2 cut(s) 48, 1187
GsuI CTGGAG 3 cut(s) 1014, 1160, 1479
HaeII RGCGCY 2 cut(s) 39, 1034
HaeIII GGCC 7 cut(s) 145, 156, 290, 390, 561, 701, 1310
HapII CCGG 1 cut(s) 33
HgaI GACGC 1 cut(s) 1516
HhaI GCGC 3 cut(s) 38, 1033, 1176
Hin1II CATG 8 cut(s) 379, 476, 759, 904, 938, 978, 1519, 1546
Hin6I GCGC 3 cut(s) 36, 1031, 1174
HinP1I GCGC 3 cut(s) 36, 1031, 1174
HincII GTYRAC 3 cut(s) 426, 1273, 1513
HindII GTYRAC 3 cut(s) 426, 1273, 1513
HinfI GANTC 3 cut(s) 112, 314, 1121
HpaII CCGG 1 cut(s) 33
HphI GGTGA 5 cut(s) 229, 295, 755, 1027, 1336
Hpy166II GTNNAC 4 cut(s) 426, 1117, 1273, 1513
Hpy188I TCNGA 6 cut(s) 383, 487, 1126, 1206, 1532, 1606
Hpy188III TCNNGA 3 cut(s) 99, 993, 1288
Hpy8I GTNNAC 4 cut(s) 426, 1117, 1273, 1513
Hpy99I CGWCG 4 cut(s) 674, 690, 965, 1532
HpyAV CCTTC 4 cut(s) 784, 871, 1063, 1276
HpyCH4III ACNGT 7 cut(s) 398, 510, 690, 961, 1015, 1159, 1231
HpyCH4IV ACGT 2 cut(s) 609, 1025
HpyCH4V TGCA 4 cut(s) 749, 809, 941, 1227
HpyF10VI GCNNNNNNNGC 3 cut(s) 344, 1039, 1384
HpyF3I CTNAG 3 cut(s) 90, 133, 1218
HpySE526I ACGT 2 cut(s) 609, 1025
Hsp92II CATG 8 cut(s) 379, 476, 759, 904, 938, 978, 1519, 1546
HspAI GCGC 3 cut(s) 36, 1031, 1174
KpnI GGTACC 1 cut(s) 1243
KspI CCGCGG 1 cut(s) 1301
Kzo9I GATC 3 cut(s) 176, 820, 929
LguI GCTCTTC 1 cut(s) 1405
LmnI GCTCC 3 cut(s) 206, 525, 847
Lsp1109I GCAGC 3 cut(s) 196, 334, 796
LweI GCATC 5 cut(s) 261, 736, 900, 940, 1380
MaeI CTAG 1 cut(s) 1085
MaeII ACGT 2 cut(s) 609, 1025
MaeIII GTNAC 2 cut(s) 1015, 1213
MalI GATC 3 cut(s) 178, 822, 931
MboI GATC 3 cut(s) 176, 820, 929
MboII GAAGA 8 cut(s) 8, 226, 706, 873, 1078, 1091, 1422, 1463
MflI RGATCY 1 cut(s) 176
MhlI GDGCHC 2 cut(s) 51, 852
MluCI AATT 3 cut(s) 6, 661, 1425
MlyI GAGTC 2 cut(s) 121, 308
MmeI TCCRAC 3 cut(s) 822, 1213, 1510
MseI TTAA 5 cut(s) 272, 617, 966, 1046, 1161
MslI CAYNNNNRTG 4 cut(s) 65, 266, 688, 905
MspA1I CMGCKG 3 cut(s) 44, 1187, 1300
MspI CCGG 1 cut(s) 33
MspR9I CCNGG 4 cut(s) 1139, 1422, 1460, 1497
MvaI CCWGG 4 cut(s) 1139, 1422, 1460, 1497
MvnI CGCG 1 cut(s) 1300
MwoI GCNNNNNNNGC 3 cut(s) 344, 1039, 1384
NcoI CCATGG 1 cut(s) 755
NdeII GATC 3 cut(s) 176, 820, 929
NlaIII CATG 8 cut(s) 379, 476, 759, 904, 938, 978, 1519, 1546
NlaIV GGNNCC 8 cut(s) 98, 178, 208, 391, 527, 692, 1241, 1501
NmuCI GTSAC 2 cut(s) 1015, 1213
NspI RCATGY 3 cut(s) 476, 938, 978
OliI CACNNNNGTG 2 cut(s) 266, 688
PaeR7I CTCGAG 1 cut(s) 458
PciI ACATGT 2 cut(s) 472, 974
PciSI GCTCTTC 1 cut(s) 1405
PfeI GAWTC 1 cut(s) 1121
PflMI CCANNNNNTGG 2 cut(s) 724, 1199
PkrI GCNGC 4 cut(s) 186, 289, 349, 786
PleI GAGTC 2 cut(s) 120, 308
PpsI GAGTC 2 cut(s) 120, 308
PpuMI RGGWCCY 1 cut(s) 96
PscI ACATGT 2 cut(s) 472, 974
Psp5II RGGWCCY 1 cut(s) 96
Psp6I CCWGG 4 cut(s) 1137, 1420, 1458, 1495
PspEI GGTNACC 1 cut(s) 1015
PspFI CCCAGC 2 cut(s) 44, 1183
PspGI CCWGG 4 cut(s) 1137, 1420, 1458, 1495
PspN4I GGNNCC 8 cut(s) 98, 178, 208, 391, 527, 692, 1241, 1501
PspPI GGNCC 9 cut(s) 96, 227, 389, 398, 559, 1190, 1285, 1308, 1500
PspPPI RGGWCCY 1 cut(s) 96
PspXI VCTCGAGB 1 cut(s) 458
PsuI RGATCY 1 cut(s) 176
PvuII CAGCTG 2 cut(s) 44, 1187
RsaI GTAC 2 cut(s) 1241, 1360
RsaNI GTAC 2 cut(s) 1240, 1359
RseI CAYNNNNRTG 4 cut(s) 65, 266, 688, 905
SacII CCGCGG 1 cut(s) 1301
SapI GCTCTTC 1 cut(s) 1405
SaqAI TTAA 5 cut(s) 272, 617, 966, 1046, 1161
SatI GCNGC 4 cut(s) 185, 288, 348, 785
Sau3AI GATC 3 cut(s) 176, 820, 929
Sau96I GGNCC 9 cut(s) 96, 227, 389, 398, 559, 1190, 1285, 1308, 1500
SchI GAGTC 2 cut(s) 121, 308
ScrFI CCNGG 4 cut(s) 1139, 1422, 1460, 1497
SduI GDGCHC 2 cut(s) 51, 852
SfaNI GCATC 5 cut(s) 261, 736, 900, 940, 1380
SfcI CTRYAG 1 cut(s) 39
Sfr274I CTCGAG 1 cut(s) 458
Sfr303I CCGCGG 1 cut(s) 1301
SgrBI CCGCGG 1 cut(s) 1301
SinI GGWCC 6 cut(s) 96, 227, 398, 1190, 1285, 1500
SlaI CTCGAG 1 cut(s) 458
SmiMI CAYNNNNRTG 4 cut(s) 65, 266, 688, 905
SmlI CTYRAG 4 cut(s) 126, 358, 458, 761
SmoI CTYRAG 4 cut(s) 126, 358, 458, 761
Sse9I AATT 3 cut(s) 6, 661, 1425
SsiI CCGC 4 cut(s) 287, 336, 1298, 1300
SspI AATATT 1 cut(s) 247
SspMI CTAG 1 cut(s) 1085
StyD4I CCNGG 4 cut(s) 1137, 1420, 1458, 1495
StyI CCWWGG 4 cut(s) 169, 201, 291, 755
TaaI ACNGT 7 cut(s) 398, 510, 690, 961, 1015, 1159, 1231
TaiI ACGT 2 cut(s) 612, 1028
TaqI TCGA 5 cut(s) 459, 819, 1280, 1408, 1561
TaqII GACCGA 3 cut(s) 230, 683, 1517
TasI AATT 3 cut(s) 6, 661, 1425
TauI GCSGC 1 cut(s) 290
TfiI GAWTC 1 cut(s) 1121
Tru1I TTAA 5 cut(s) 272, 617, 966, 1046, 1161
Tru9I TTAA 5 cut(s) 272, 617, 966, 1046, 1161
TscAI CASTG 8 cut(s) 590, 811, 1006, 1044, 1068, 1162, 1222, 1234
TseFI GTSAC 2 cut(s) 1015, 1213
TseI GCWGC 3 cut(s) 184, 347, 784
Tsp45I GTSAC 2 cut(s) 1015, 1213
TspDTI ATGAA 5 cut(s) 593, 812, 889, 1092, 1559
TspGWI ACGGA 1 cut(s) 907
TspRI CASTG 8 cut(s) 590, 811, 1006, 1044, 1068, 1162, 1222, 1234
Van91I CCANNNNNTGG 2 cut(s) 724, 1199
VpaK11BI GGWCC 6 cut(s) 96, 227, 398, 1190, 1285, 1500
XagI CCTNNNNNAGG 2 cut(s) 150, 1280
XapI RAATTY 1 cut(s) 6
XceI RCATGY 3 cut(s) 476, 938, 978
XcmI CCANNNNNNNNNTGG 2 cut(s) 762, 1257
XhoI CTCGAG 1 cut(s) 458
XspI CTAG 1 cut(s) 1085
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.