Rorug06G0452200

Belongs to the mitochondrial carrier (TC 2.A.29) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0010862
Physical Location & Seq
Forward (+)
58121352 .. 58123412
2061 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0452200.1

Sequence Viewer

Length: 2061 bp
ATGAATGAGAGGCAGAGATTGGCGAATCTCCTGCGGAACTGTTCGAAGAATTTGCTACTTCGTGAGGGATTGCAAGCTCATGGGTCAGTGATGAGAATGGGACTTGGGTTTGATTTGATGCTGAACAATGATCTTATAGATATGTATAGCAAGTGTGGTAGAATGGGGAGTGCACGTGAGGTGTTTGATAGAATGCCTGAGAGAAATGTGGTTTCCTGGACTGCTTTAATGTGTGGCTACTTAAACAGTGGCAATGCCAAAGGGTCATTATCTCTGTTTAGTGAAATGGGATTTTCGGGAGTTAAGCCGAATGAGTACACTCTTTCGACTAATCTCAAGGCGTCTGGGATCTTGGGGATTGCTGATAATGGAATGCAGATACACAGTATGTGCGCTAAGTCTGGTTATGAATGGGCTGCAGTGGTGAGCAATGCTATCCTTGACATGTATGCGAAATGTGGAAGAGTTAGTGAAGCGTCCAGGATGTTCAGTGTTATGCCGGCTAAGAATGTTATTACTTGGAACGCAATGATAGCTGGATACACGGTTGAAGGAAATGGGGAGAAAGCGTTGGTATTGTTTAGGAAAATGCAAGAGCTGGGAGAAGTTCCGGATGAGTATACGATTACAAGCACACTCAAGGCTTGTAGTGGCCTTGGAGCAATTCGGCAAGGAAGCCAAATACATTCCTCCTTGATCACAAGGGGGTTTCTGTGTTCAGTTCGGACGATTATTGCAGGTGCTCTCGTTGATATGTATGTGAAGTGCAGGCACTTAACTGAAGCTCAGAGAGTGTTTGATCAAGTTGAACAGAAGAATCTAATATCTTGGAGTGCCCTGATTCTTGGTTATGCCCAAGAATGCAATTTAACACAGGCCATGGAGTTGTTTAGGCAGCTCAGAGCTAGTGTATGTCATCAAGTAGATGGGTTTGTTCTGTCGAGCATTATGGGTGTGTTTGCTGATTTTGCTCTAGTAGAACAAGGTAGGCAAATGCATGCTTTCACCACTAAAATCCCATCTGGTTTAGACATATCGGTGTTTAACTCGATTCTGGATATGTATCTCAAGTGTGGTTTGACAGATGAGGCAGAAAGACTTTTCGATGAAATTCAGTTGAGAAATGTAATTTCTTGGACAATTATGATCACCGGGTTTGGAAAGCATGGTCTGGGGAAGAAAGCTGTGCTTCTTTTCAACCAAATGCAATCGGAGGAAATAGAACCTGATGGAGTGACTTACTTGGCAGTGCTCTCAGCCTGCAGCCATTCTGGACTAATTCAAGAATGCCAAGAATACTTCTCAAGATTGTGTCATGACAAACGGATTAAGCAAACTGTAGAGCATTATGCTTGCATGGTTGATCTCCTTGGTCGAGCAGGAAGATTAAAAGAAGCTAAGAATCTGATTGACAGCATGCTGCTAAAACCAAATATTGGAATATGGCAGACATTGCTTAGTGCTTGTAGAGTACATGGAGAGGTGGAGATAGGGAGAGAAGTGGGAGAGATGCTTCTGAGATTGGATGGTGATAACGCGGTCAACTATGTGATGCTGTCAAACCTCTATGCAGAGGCCGGCTACTGGAAGGAGTGTGAGAGAATAAGAAAACTGTTTAAGAGGAAGGGGTTAAAAAAAGATGCAGGACGGAGTTGGGTAGAGATTGACAAGGAGGTCTACTTCTTCTACAATGGAGATGAGAGTCATCCACTTACAGAAAAGATTCATCAAGTATTGAAGGAAATGGAGAACAGAATAAAATCTGAGATCGGCTACGTTCATGGGGTGAGATTTGCACTGCATGACGTAGAAGAGGAGTCAAAAGAAGAGAGCTTGAGAGTTCATAGTGAAAAACTGGCAATCGGGTTGGCATTGGTATGTGGTGAGCTTGAGAAAGGGAATAGAACAATTCGGATCTTCAAGAACTTGAGGGTATGTGGTGATTGCCATGCCTTCATTAAAGGCTTGTCAAAGGTTTTGAAGGTGGTAATTCTTGTGAGAGATGCTAATAGGTTTCACAAGTTTGAGGACGGCGTGTGTTCTTGTGGAGATTATTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF647 Mito_carr

Protein Analysis

686

Amino Acids

77.03

Weight (kDa)

7.74

Isoelectric Point (pI)

32.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 68 - 113 5e-10 PPR repeat family
PPR_2 PF13041 169 - 216 5.7e-12 PPR repeat family
PPR PF01535 172 - 201 1.2e-07 PPR repeat
PPR_2 PF13041 374 - 422 1.4e-11 PPR repeat family
PPR PF01535 377 - 405 1.2e-06 PPR repeat
E_motif PF20431 492 - 554 6.4e-17 E motif
DYW_deaminase PF14432 591 - 686 2.5e-32 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010862)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74240 AT1G74240
fragaria_vesca FvH4_5g13870 FvH4_5g13870 FvH4_5g13870
malus_domestica MD06G1202800.v1.1 MD14G1211900.v1.1
prunus_persica Prupe.5G204700_v2.0.a1
pyrus_communis pycom14g17550
rosa_chinensis RchiOBHm_Chr7g0183061
rosa_laevigata RLG00000005082
rosa_multiflora Rmu_sc0000014.1_g000003
rosa_roxburghii Rroxscaffold_3G00270800
rosa_rugosa Rorug06G0452200 Rorug06G0452300
rosa_samantha Rh7AG055700 Rh7BG055000 Rh7CG056400 Rh7DG055200
rosa_wichuraiana Rw7G004530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 728
AasI GACNNNNNNGTC 1 cut(s) 1673
Acc36I ACCTGC 1 cut(s) 728
AccB7I CCANNNNNTGG 1 cut(s) 1436
AccI GTMKAC 2 cut(s) 620, 1677
AccII CGCG 1 cut(s) 1538
AccIII TCCGGA 1 cut(s) 610
AciI CCGC 2 cut(s) 34, 1538
AclWI GGATC 2 cut(s) 356, 1922
AcsI RAATTY 2 cut(s) 49, 1110
AcuI CTGAAG 1 cut(s) 801
AcvI CACGTG 1 cut(s) 176
AcyI GRCGYC 1 cut(s) 341
AfaI GTAC 2 cut(s) 317, 1473
AfiI CCNNNNNNNGG 2 cut(s) 1436, 1584
AflIII ACRYGT 1 cut(s) 444
AgsI TTSAA 7 cut(s) 551, 809, 1198, 1283, 1738, 1921, 1981
AjnI CCWGG 2 cut(s) 215, 479
Alw21I GWGCWC 3 cut(s) 175, 745, 1254
Alw44I GTGCAC 1 cut(s) 171
AlwI GGATC 2 cut(s) 356, 1922
Aor13HI TCCGGA 1 cut(s) 610
AoxI GGCC 3 cut(s) 652, 876, 1575
ApaLI GTGCAC 1 cut(s) 171
ApeKI GCWGC 4 cut(s) 416, 895, 1263, 1420
ApoI RAATTY 2 cut(s) 49, 1110
Asp700I GAANNNNTTC 1 cut(s) 1722
AspLEI GCGC 1 cut(s) 395
AsuC2I CCSGG 1 cut(s) 1153
AsuHPI GGTGA 7 cut(s) 436, 997, 1141, 1541, 1798, 1895, 1952
AsuII TTCGAA 1 cut(s) 44
BaeGI GKGCMC 2 cut(s) 175, 838
BbrPI CACGTG 1 cut(s) 176
Bbv12I GWGCWC 3 cut(s) 175, 745, 1254
BbvI GCAGC 4 cut(s) 403, 907, 1275, 1407
BccI CCATC 4 cut(s) 920, 1027, 1223, 1520
BceAI ACGGC 1 cut(s) 2047
BcgI CGANNNNNNTGC 4 cut(s) 13, 34, 47, 68
BciT130I CCWGG 2 cut(s) 217, 481
BciVI GTATCC 1 cut(s) 533
BclI TGATCA 3 cut(s) 696, 799, 1146
BcnI CCSGG 1 cut(s) 1153
BfaI CTAG 2 cut(s) 906, 974
BfmI CTRYAG 3 cut(s) 417, 1261, 1338
BfuAI ACCTGC 1 cut(s) 728
BfuI GTATCC 1 cut(s) 533
BisI GCNGC 4 cut(s) 417, 896, 1264, 1421
BlsI GCNGC 4 cut(s) 418, 897, 1265, 1422
Bme1390I CCNGG 3 cut(s) 217, 481, 1153
BmrFI CCNGG 3 cut(s) 217, 481, 1153
BmsI GCATC 5 cut(s) 108, 1500, 1542, 1630, 1993
Bpu14I TTCGAA 1 cut(s) 44
BpuEI CTTGAG 7 cut(s) 320, 623, 1052, 1288, 1855, 1910, 1948
BpuMI CCSGG 1 cut(s) 1153
BsaAI YACGTR 1 cut(s) 176
BsaBI GATNNNNATC 1 cut(s) 1062
BsaHI GRCGYC 1 cut(s) 341
BsaJI CCNNGG 3 cut(s) 655, 879, 1369
BsaWI WCCGGW 1 cut(s) 610
BsaXI ACNNNNNCTCC 4 cut(s) 160, 190, 554, 584
Bsc4I CCNNNNNNNGG 2 cut(s) 1436, 1584
Bse118I RCCGGY 2 cut(s) 499, 1577
Bse1I ACTGG 2 cut(s) 1589, 1860
Bse3DI GCAATG 4 cut(s) 259, 436, 534, 1451
Bse8I GATNNNNATC 1 cut(s) 1062
BseAI TCCGGA 1 cut(s) 610
BseBI CCWGG 2 cut(s) 217, 481
BseDI CCNNGG 3 cut(s) 655, 879, 1369
BseGI GGATG 4 cut(s) 489, 619, 1531, 1705
BseJI GATNNNNATC 1 cut(s) 1062
BseLI CCNNNNNNNGG 2 cut(s) 1436, 1584
BseMI GCAATG 4 cut(s) 259, 436, 534, 1451
BseMII CTCAG 6 cut(s) 189, 800, 913, 1269, 1508, 1755
BseNI ACTGG 2 cut(s) 1589, 1860
BseRI GAGGAG 1 cut(s) 1829
BseSI GKGCMC 2 cut(s) 175, 838
BseXI GCAGC 4 cut(s) 403, 907, 1275, 1407
BseYI CCCAGC 1 cut(s) 598
BsgI GTGCAG 1 cut(s) 787
Bsh1236I CGCG 1 cut(s) 1538
BshFI GGCC 3 cut(s) 654, 878, 1577
BsiHKAI GWGCWC 3 cut(s) 175, 745, 1254
BsiSI CCGG 4 cut(s) 500, 611, 1152, 1578
BslFI GGGAC 1 cut(s) 114
BslI CCNNNNNNNGG 2 cut(s) 1436, 1584
BsmFI GGGAC 1 cut(s) 114
BsmI GAATGC 4 cut(s) 198, 378, 866, 1292
BsnI GGCC 3 cut(s) 654, 878, 1577
Bsp119I TTCGAA 1 cut(s) 44
Bsp1286I GDGCHC 4 cut(s) 175, 745, 838, 1254
Bsp13I TCCGGA 1 cut(s) 610
Bsp143I GATC 8 cut(s) 130, 348, 696, 799, 1146, 1363, 1767, 1914
Bsp19I CCATGG 1 cut(s) 879
BspACI CCGC 2 cut(s) 34, 1538
BspANI GGCC 3 cut(s) 654, 878, 1577
BspCNI CTCAG 6 cut(s) 190, 799, 912, 1268, 1509, 1756
BspEI TCCGGA 1 cut(s) 610
BspFNI CGCG 1 cut(s) 1538
BspHI TCATGA 1 cut(s) 1315
BspMAI CTGCAG 2 cut(s) 421, 1265
BspMI ACCTGC 1 cut(s) 728
BspPI GGATC 2 cut(s) 356, 1922
BspT104I TTCGAA 1 cut(s) 44
BsrDI GCAATG 4 cut(s) 259, 436, 534, 1451
BsrFI RCCGGY 2 cut(s) 499, 1577
BsrI ACTGG 2 cut(s) 1589, 1860
BssAI RCCGGY 2 cut(s) 499, 1577
BssECI CCNNGG 3 cut(s) 655, 879, 1369
BssMI GATC 8 cut(s) 130, 348, 696, 799, 1146, 1363, 1767, 1914
BssNAI GTATAC 1 cut(s) 621
BssNI GRCGYC 1 cut(s) 341
BssT1I CCWWGG 3 cut(s) 655, 879, 1369
Bst1107I GTATAC 1 cut(s) 621
Bst2UI CCWGG 2 cut(s) 217, 481
Bst4CI ACNGT 6 cut(s) 41, 248, 386, 547, 1339, 1614
Bst6I CTCTTC 3 cut(s) 457, 1806, 1821
BstACI GRCGYC 1 cut(s) 341
BstAPI GCANNNNNTGC 1 cut(s) 1453
BstBAI YACGTR 1 cut(s) 176
BstBI TTCGAA 1 cut(s) 44
BstC8I GCNNGC 8 cut(s) 75, 501, 770, 999, 1261, 1354, 1418, 1579
BstDSI CCRYGG 1 cut(s) 879
BstF5I GGATG 4 cut(s) 489, 619, 1531, 1705
BstFNI CGCG 1 cut(s) 1538
BstHHI GCGC 1 cut(s) 395
BstKTI GATC 8 cut(s) 133, 351, 699, 802, 1149, 1366, 1770, 1917
BstMBI GATC 8 cut(s) 130, 348, 696, 799, 1146, 1363, 1767, 1914
BstMWI GCNNNNNNNGC 3 cut(s) 533, 968, 1453
BstNI CCWGG 2 cut(s) 217, 481
BstNSI RCATGY 3 cut(s) 448, 1001, 1420
BstSCI CCNGG 3 cut(s) 215, 479, 1151
BstSFI CTRYAG 3 cut(s) 417, 1261, 1338
BstSLI GKGCMC 2 cut(s) 175, 838
BstUI CGCG 1 cut(s) 1538
BstV1I GCAGC 4 cut(s) 403, 907, 1275, 1407
BstX2I RGATCY 2 cut(s) 348, 1914
BstYI RGATCY 2 cut(s) 348, 1914
BstZ17I GTATAC 1 cut(s) 621
BsuI GTATCC 1 cut(s) 533
BsuRI GGCC 3 cut(s) 654, 878, 1577
BtgI CCRYGG 1 cut(s) 879
BtsCI GGATG 4 cut(s) 489, 619, 1531, 1705
BtsI GCAGTG 3 cut(s) 426, 1254, 1796
BtsIMutI CAGTG 6 cut(s) 93, 253, 426, 496, 1254, 1796
BveI ACCTGC 1 cut(s) 728
Cac8I GCNNGC 8 cut(s) 75, 501, 770, 999, 1261, 1354, 1418, 1579
CciI TCATGA 1 cut(s) 1315
CfoI GCGC 1 cut(s) 395
Cfr10I RCCGGY 2 cut(s) 499, 1577
CseI GACGC 2 cut(s) 330, 465
Csp6I GTAC 2 cut(s) 316, 1472
CviQI GTAC 2 cut(s) 316, 1472
DpnI GATC 8 cut(s) 132, 350, 698, 801, 1148, 1365, 1769, 1916
DpnII GATC 8 cut(s) 130, 348, 696, 799, 1146, 1363, 1767, 1914
DrdI GACNNNNNNGTC 1 cut(s) 1673
DseDI GACNNNNNNGTC 1 cut(s) 1673
Eam1104I CTCTTC 3 cut(s) 457, 1806, 1821
EarI CTCTTC 3 cut(s) 457, 1806, 1821
Eco130I CCWWGG 3 cut(s) 655, 879, 1369
Eco57I CTGAAG 1 cut(s) 801
Eco72I CACGTG 1 cut(s) 176
EcoRII CCWGG 2 cut(s) 215, 479
EcoT14I CCWWGG 3 cut(s) 655, 879, 1369
EcoT22I ATGCAT 1 cut(s) 999
ErhI CCWWGG 3 cut(s) 655, 879, 1369
FalI AAGNNNNNCTT 2 cut(s) 1173, 1205
FaqI GGGAC 1 cut(s) 114
FbaI TGATCA 3 cut(s) 696, 799, 1146
FblI GTMKAC 2 cut(s) 620, 1677
Fnu4HI GCNGC 4 cut(s) 417, 896, 1264, 1421
FokI GGATG 4 cut(s) 496, 626, 1538, 1692
Fsp4HI GCNGC 4 cut(s) 417, 896, 1264, 1421
FspBI CTAG 2 cut(s) 906, 974
GlaI GCGC 1 cut(s) 394
GluI GCNGC 4 cut(s) 417, 896, 1264, 1421
GsaI CCCAGC 1 cut(s) 602
HaeIII GGCC 3 cut(s) 654, 878, 1577
HapII CCGG 4 cut(s) 500, 611, 1152, 1578
HgaI GACGC 2 cut(s) 330, 465
HhaI GCGC 1 cut(s) 395
Hin1I GRCGYC 1 cut(s) 341
Hin6I GCGC 1 cut(s) 393
HinP1I GCGC 1 cut(s) 393
HincII GTYRAC 1 cut(s) 1543
HindII GTYRAC 1 cut(s) 1543
HinfI GANTC 8 cut(s) 25, 817, 841, 1051, 1402, 1702, 1723, 1817
HpaII CCGG 4 cut(s) 500, 611, 1152, 1578
HphI GGTGA 7 cut(s) 436, 997, 1141, 1541, 1798, 1895, 1952
Hpy166II GTNNAC 5 cut(s) 173, 318, 621, 1543, 1678
Hpy188I TCNGA 8 cut(s) 726, 789, 902, 1213, 1407, 1518, 1765, 1914
Hpy188III TCNNGA 9 cut(s) 62, 297, 611, 1055, 1272, 1283, 1305, 1316, 1921
Hpy8I GTNNAC 5 cut(s) 173, 318, 621, 1543, 1678
HpyAV CCTTC 6 cut(s) 545, 1582, 1618, 1732, 1963, 1975
HpyCH4III ACNGT 6 cut(s) 41, 248, 386, 547, 1339, 1614
HpyCH4IV ACGT 3 cut(s) 175, 1776, 1806
HpyF10VI GCNNNNNNNGC 3 cut(s) 533, 968, 1453
HpySE526I ACGT 3 cut(s) 175, 1776, 1806
Hsp92I GRCGYC 1 cut(s) 341
HspAI GCGC 1 cut(s) 393
Kpn2I TCCGGA 1 cut(s) 610
KroI GCCGGC 2 cut(s) 499, 1577
KroNI GCCGGC 2 cut(s) 501, 1579
Ksp22I TGATCA 3 cut(s) 696, 799, 1146
Kzo9I GATC 8 cut(s) 130, 348, 696, 799, 1146, 1363, 1767, 1914
LmnI GCTCC 1 cut(s) 659
Lsp1109I GCAGC 4 cut(s) 403, 907, 1275, 1407
LweI GCATC 5 cut(s) 108, 1500, 1542, 1630, 1993
MaeI CTAG 2 cut(s) 906, 974
MaeII ACGT 3 cut(s) 175, 1776, 1806
MaeIII GTNAC 1 cut(s) 1234
MalI GATC 8 cut(s) 132, 350, 698, 801, 1148, 1365, 1769, 1916
MboI GATC 8 cut(s) 130, 348, 696, 799, 1146, 1363, 1767, 1914
MboII GAAGA 9 cut(s) 58, 474, 826, 1189, 1395, 1675, 1823, 1838, 1909
MflI RGATCY 2 cut(s) 348, 1914
MhlI GDGCHC 4 cut(s) 175, 745, 838, 1254
MluCI AATT 9 cut(s) 49, 663, 865, 1110, 1128, 1140, 1278, 1908, 1989
MlyI GAGTC 2 cut(s) 1711, 1826
Mph1103I ATGCAT 1 cut(s) 999
MroI TCCGGA 1 cut(s) 610
MroNI GCCGGC 2 cut(s) 499, 1577
MroXI GAANNNNTTC 1 cut(s) 1722
MslI CAYNNNNRTG 2 cut(s) 1037, 1876
MspI CCGG 4 cut(s) 500, 611, 1152, 1578
MspR9I CCNGG 3 cut(s) 217, 481, 1153
Mva1269I GAATGC 4 cut(s) 198, 378, 866, 1292
MvaI CCWGG 2 cut(s) 217, 481
MvnI CGCG 1 cut(s) 1538
MwoI GCNNNNNNNGC 3 cut(s) 533, 968, 1453
NaeI GCCGGC 2 cut(s) 501, 1579
NciI CCSGG 1 cut(s) 1153
NcoI CCATGG 1 cut(s) 879
NdeII GATC 8 cut(s) 130, 348, 696, 799, 1146, 1363, 1767, 1914
NgoMIV GCCGGC 2 cut(s) 499, 1577
NmuCI GTSAC 1 cut(s) 1234
NsiI ATGCAT 1 cut(s) 999
NspI RCATGY 3 cut(s) 448, 1001, 1420
NspV TTCGAA 1 cut(s) 44
PaeI GCATGC 2 cut(s) 1001, 1420
PagI TCATGA 1 cut(s) 1315
PaqCI CACCTGC 1 cut(s) 728
PciI ACATGT 1 cut(s) 444
PctI GAATGC 4 cut(s) 198, 378, 866, 1292
PdiI GCCGGC 2 cut(s) 501, 1579
PdmI GAANNNNTTC 1 cut(s) 1722
PfeI GAWTC 6 cut(s) 25, 817, 841, 1051, 1402, 1723
PflMI CCANNNNNTGG 1 cut(s) 1436
PfoI TCCNGGA 2 cut(s) 215, 479
PkrI GCNGC 4 cut(s) 418, 897, 1265, 1422
PleI GAGTC 2 cut(s) 1710, 1825
PmaCI CACGTG 1 cut(s) 176
PmlI CACGTG 1 cut(s) 176
PpsI GAGTC 2 cut(s) 1710, 1825
Ppu21I YACGTR 1 cut(s) 176
PscI ACATGT 1 cut(s) 444
Psp6I CCWGG 2 cut(s) 215, 479
PspCI CACGTG 1 cut(s) 176
PspFI CCCAGC 1 cut(s) 598
PspGI CCWGG 2 cut(s) 215, 479
PstI CTGCAG 2 cut(s) 421, 1265
PsuI RGATCY 2 cut(s) 348, 1914
RsaI GTAC 2 cut(s) 317, 1473
RsaNI GTAC 2 cut(s) 316, 1472
RseI CAYNNNNRTG 2 cut(s) 1037, 1876
SatI GCNGC 4 cut(s) 417, 896, 1264, 1421
Sau3AI GATC 8 cut(s) 130, 348, 696, 799, 1146, 1363, 1767, 1914
SchI GAGTC 2 cut(s) 1711, 1826
ScrFI CCNGG 3 cut(s) 217, 481, 1153
SduI GDGCHC 4 cut(s) 175, 745, 838, 1254
SfaNI GCATC 5 cut(s) 108, 1500, 1542, 1630, 1993
SfcI CTRYAG 3 cut(s) 417, 1261, 1338
SfuI TTCGAA 1 cut(s) 44
SmiMI CAYNNNNRTG 2 cut(s) 1037, 1876
SmlI CTYRAG 7 cut(s) 335, 638, 1067, 1303, 1834, 1889, 1927
SmoI CTYRAG 7 cut(s) 335, 638, 1067, 1303, 1834, 1889, 1927
SphI GCATGC 2 cut(s) 1001, 1420
Sse9I AATT 9 cut(s) 49, 663, 865, 1110, 1128, 1140, 1278, 1908, 1989
SsiI CCGC 2 cut(s) 34, 1538
SspI AATATT 1 cut(s) 1435
SspMI CTAG 2 cut(s) 906, 974
StyD4I CCNGG 3 cut(s) 215, 479, 1151
StyI CCWWGG 3 cut(s) 655, 879, 1369
TaaI ACNGT 6 cut(s) 41, 248, 386, 547, 1339, 1614
TaiI ACGT 3 cut(s) 178, 1779, 1809
TaqI TCGA 6 cut(s) 44, 326, 941, 1049, 1104, 1375
TasI AATT 9 cut(s) 49, 663, 865, 1110, 1128, 1140, 1278, 1908, 1989
TatI WGTACW 2 cut(s) 315, 1471
TfiI GAWTC 6 cut(s) 25, 817, 841, 1051, 1402, 1723
TscAI CASTG 6 cut(s) 93, 253, 426, 496, 1254, 1803
TseFI GTSAC 1 cut(s) 1234
TseI GCWGC 4 cut(s) 416, 895, 1263, 1420
Tsp45I GTSAC 1 cut(s) 1234
TspDTI ATGAA 7 cut(s) 17, 423, 1122, 1715, 1769, 1832, 1945
TspGWI ACGGA 2 cut(s) 1339, 1663
TspRI CASTG 6 cut(s) 93, 253, 426, 496, 1254, 1803
Van91I CCANNNNNTGG 1 cut(s) 1436
VneI GTGCAC 1 cut(s) 171
XapI RAATTY 2 cut(s) 49, 1110
XceI RCATGY 3 cut(s) 448, 1001, 1420
XmiI GTMKAC 2 cut(s) 620, 1677
XmnI GAANNNNTTC 1 cut(s) 1722
XspI CTAG 2 cut(s) 906, 974
Zsp2I ATGCAT 1 cut(s) 999
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.