Rorug06G0480700

Beta-carotene isomerase D27

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0016208
Physical Location & Seq
Forward (+)
60227000 .. 60230932
3933 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0480700.1

Sequence Viewer

Length: 1422 bp
ATGGAGAGGAAGCAGGGGTTCTTTTCGGCGCTGAAGGAGGATGTGGTGAGGGGTCTGTCGCCGTCGAGGTCGAGGTCGAAGAGTCCGGCGAGGAGTGGGTCCCCAATGTCGGCTCTGCTGCGTCGCAGGAGGAGGCACCACGTGGCGGAGCAGCTCATGGTAGCGAGATCCGGGGGGCTGAGGCCGCCGGCGGAGGCGCTGTCGCCGTTGAAGGAAGGCCCGGATGGGACGGACGGCGAGGATGATTCCAAGATGGAGGGCAAGTGGGGCCACTGGATGAAGGGCCAGCTGTGCAGGGCTCCCGCCGTGGCGTGCTCCTCGTCGGCGTACAAGAGGTCGGATCTGAGGCTCTTGCTTGGGGTTTTGGGTGCACCCTTGGGACCTGTGCACGTTAGCACAGTCGATTCCTTCCCTCATCTCAGTATTAAGGACACCCCCATTGAAACTTCGTCTGCTCAGTATATATTGCAGCAATATACAGCAGCGTCTGGGGGGCAAAAGCTTCAGAACTCGATTCACAATGCTTATGCTATGGGAAAGGTTAAGATGGTAGCTTCTGAGTTTGAGACAGCTGGCAAGGTCGTGAAGAACCGCAATTCCTCCAAAGCGGCAGATTCAGGTGGATTTGTCCTGTGGCAGATGCATCCAGATATGTGGTATGTGGAACTTGCCATTGGTGGCAGCAAGGTTCATGCTGGCTGCAATGGAAAGCTTGTCTGGAGGCACACGCCATGGCTTGGTGCACACACTGCTAAAGGGCCTGTTAGACCCTTGCGGCGTGCACTTCAGGGACTTGACCCGAGAACCACTGCTAGCATGTTTACCAACTCAAGATGCATTGGTGAAAAGAAGATCAATGGCGAGGATTGCTTCATCCTCAAGCTTTGCACAGATCCTTTAACTTTGAAAGCTAGGAGTGAAGGGCCTGCGGAGATCATAAGGCATGTTTTATTTGGCTACTTCAGCCAGAAAACAGGTCTTCTTATACACTTGGAAGATTCTCATTTGACCCGCATTCAGAACCATGGAGGTGATGCTGTCTACTGGGAGACCACAATCAATTCATTCCTTGATGATTATAGGCCTGTGGAGGGAATTATGATCGCTCACTCAGGGCGTTCAGTAGTTACTCTTTTCAGGTTTGGAGAAACTGCAATGAGCCATACTAAGACTAGGATGGAAGAAGCTTGGACAATTGAGGAAGTGGCATTCAATGTCCCTGGGTTGTCAGTAGACTGTTTTATCCCCCCTGCTGAGCTAAGATTTGCTTCTATGAGTGAAACCAGTGAGCTGCCTCAGGGTCAGGCCATAAAGAACACCATGGCAGCAGCTGCATATCGTTCCAAAGTTGCTGCACTCGAAAAGTCTCATGATGCCAACGTCAGTAATATTGTGTGGAAAATGGGAAACATGGATGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4033

Protein Analysis

473

Amino Acids

51.91

Weight (kDa)

9.31

Isoelectric Point (pI)

56.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF620 PF04788 176 - 417 8.9e-120 Protein of unknown function (DUF620)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016208)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64680 AT1G64680
fragaria_vesca FvH4_5g10820
malus_domestica MD14G1137300.v1.1
prunus_persica Prupe.5G131200_v2.0.a1
pyrus_communis pycom14g11240
rosa_chinensis RchiOBHm_Chr7g0187341
rosa_laevigata RLG00000004793
rosa_roxburghii Rroxscaffold_3G00267590
rosa_rugosa Rorug06G0480700
rosa_samantha Rh7AG085200 Rh7BG077400 Rh7CG086200 Rh7DG087300
rosa_wichuraiana Rw7G007490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 135
AccB7I CCANNNNNTGG 1 cut(s) 737
AccI GTMKAC 2 cut(s) 1041, 1233
AciI CCGC 9 cut(s) 146, 185, 191, 303, 592, 608, 775, 929, 1012
AclWI GGATC 3 cut(s) 162, 348, 887
AcuI CTGAAG 4 cut(s) 53, 488, 770, 946
AcvI CACGTG 1 cut(s) 142
AdeI CACNNNGTG 1 cut(s) 142
AfaI GTAC 1 cut(s) 329
AfiI CCNNNNNNNGG 4 cut(s) 109, 145, 737, 1091
AgsI TTSAA 4 cut(s) 211, 443, 907, 1213
AjnI CCWGG 1 cut(s) 1219
AjuI GAANNNNNNNTTGG 2 cut(s) 657, 689
AloI GAACNNNNNNTCC 2 cut(s) 581, 613
Alw21I GWGCWC 5 cut(s) 317, 373, 390, 745, 784
Alw26I GTCTC 3 cut(s) 560, 1043, 1371
Alw44I GTGCAC 4 cut(s) 369, 386, 741, 780
AlwI GGATC 3 cut(s) 162, 348, 887
AlwNI CAGNNNCTG 2 cut(s) 488, 1331
Ama87I CYCGRG 1 cut(s) 799
AoxI GGCC 8 cut(s) 182, 217, 268, 283, 758, 923, 1082, 1305
ApaLI GTGCAC 4 cut(s) 369, 386, 741, 780
AspLEI GCGC 2 cut(s) 31, 199
AspS9I GGNCC 7 cut(s) 99, 218, 268, 283, 380, 758, 923
AsuC2I CCSGG 2 cut(s) 172, 221
AsuHPI GGTGA 3 cut(s) 58, 854, 1043
AsuNHI GCTAGC 1 cut(s) 812
AvaI CYCGRG 1 cut(s) 799
AvaII GGWCC 2 cut(s) 99, 380
AxyI CCTNAGG 1 cut(s) 1296
BaeGI GKGCMC 4 cut(s) 373, 390, 745, 784
BanI GGYRCC 1 cut(s) 135
BanII GRGCYC 1 cut(s) 301
BbrPI CACGTG 1 cut(s) 142
BbsI GAAGAC 1 cut(s) 971
Bbv12I GWGCWC 5 cut(s) 317, 373, 390, 745, 784
BbvCI CCTCAGC 1 cut(s) 179
BccI CCATC 4 cut(s) 218, 247, 541, 1171
BceAI ACGGC 4 cut(s) 46, 190, 250, 290
BciT130I CCWGG 1 cut(s) 1221
BcnI CCSGG 2 cut(s) 172, 221
BcoDI GTCTC 3 cut(s) 560, 1043, 1371
BfaI CTAG 3 cut(s) 813, 912, 1173
BfoI RGCGCY 2 cut(s) 32, 200
BlpI GCTNAGC 1 cut(s) 1254
Bme1390I CCNGG 3 cut(s) 172, 221, 1221
Bme18I GGWCC 2 cut(s) 99, 380
BmeT110I CYCGRG 1 cut(s) 799
BmgT120I GGNCC 7 cut(s) 99, 218, 268, 283, 380, 758, 923
BmiI GGNNCC 6 cut(s) 100, 101, 137, 269, 300, 381
BmrFI CCNGG 3 cut(s) 172, 221, 1221
BmrI ACTGGG 1 cut(s) 1054
BmsI GCATC 5 cut(s) 630, 652, 824, 1024, 1363
BmtI GCTAGC 1 cut(s) 816
BmuI ACTGGG 1 cut(s) 1054
BpiI GAAGAC 1 cut(s) 971
BpmI CTGGAG 1 cut(s) 739
Bpu10I CCTNAGC 1 cut(s) 179
Bpu1102I GCTNAGC 1 cut(s) 1254
BpuEI CTTGAG 2 cut(s) 814, 863
BpuMI CCSGG 2 cut(s) 172, 221
BsaAI YACGTR 1 cut(s) 142
BsaI GGTCTC 1 cut(s) 1043
BsaJI CCNNGG 8 cut(s) 171, 306, 375, 731, 1024, 1219, 1220, 1320
BsaXI ACNNNNNCTCC 4 cut(s) 185, 215, 248, 278
Bsc4I CCNNNNNNNGG 4 cut(s) 109, 145, 737, 1091
Bse118I RCCGGY 1 cut(s) 187
Bse1I ACTGG 3 cut(s) 278, 1049, 1284
Bse21I CCTNAGG 1 cut(s) 1296
Bse3DI GCAATG 2 cut(s) 709, 1161
BseBI CCWGG 1 cut(s) 1221
BseDI CCNNGG 8 cut(s) 171, 306, 375, 731, 1024, 1219, 1220, 1320
BseGI GGATG 8 cut(s) 46, 229, 247, 282, 643, 873, 1182, 1420
BseLI CCNNNNNNNGG 4 cut(s) 109, 145, 737, 1091
BseMI GCAATG 2 cut(s) 709, 1161
BseMII CTCAG 8 cut(s) 170, 335, 433, 470, 549, 1125, 1245, 1310
BseNI ACTGG 3 cut(s) 278, 1049, 1284
BseRI GAGGAG 3 cut(s) 106, 145, 307
BseSI GKGCMC 4 cut(s) 373, 390, 745, 784
BsgI GTGCAG 2 cut(s) 313, 1338
BshFI GGCC 8 cut(s) 184, 219, 270, 285, 760, 925, 1084, 1307
BshNI GGYRCC 1 cut(s) 135
BsiHKAI GWGCWC 5 cut(s) 317, 373, 390, 745, 784
BsiHKCI CYCGRG 1 cut(s) 799
BsiSI CCGG 4 cut(s) 86, 171, 188, 221
BslFI GGGAC 5 cut(s) 85, 241, 393, 804, 1202
BslI CCNNNNNNNGG 4 cut(s) 109, 145, 737, 1091
BsmAI GTCTC 3 cut(s) 560, 1043, 1371
BsmFI GGGAC 5 cut(s) 85, 241, 393, 804, 1202
BsmI GAATGC 2 cut(s) 1014, 1208
BsnI GGCC 8 cut(s) 184, 219, 270, 285, 760, 925, 1084, 1307
Bso31I GGTCTC 1 cut(s) 1043
BsoBI CYCGRG 1 cut(s) 799
Bsp1286I GDGCHC 6 cut(s) 301, 317, 373, 390, 745, 784
Bsp143I GATC 6 cut(s) 167, 340, 852, 892, 933, 1101
Bsp1720I GCTNAGC 1 cut(s) 1254
Bsp19I CCATGG 3 cut(s) 731, 1024, 1320
BspACI CCGC 9 cut(s) 146, 185, 191, 303, 592, 608, 775, 929, 1012
BspANI GGCC 8 cut(s) 184, 219, 270, 285, 760, 925, 1084, 1307
BspCNI CTCAG 8 cut(s) 171, 336, 432, 469, 550, 1124, 1246, 1309
BspHI TCATGA 1 cut(s) 1369
BspLI GGNNCC 6 cut(s) 100, 101, 137, 269, 300, 381
BspOI GCTAGC 1 cut(s) 816
BspPI GGATC 3 cut(s) 162, 348, 887
BspT107I GGYRCC 1 cut(s) 135
BspTNI GGTCTC 1 cut(s) 1043
BsrDI GCAATG 2 cut(s) 709, 1161
BsrFI RCCGGY 1 cut(s) 187
BsrI ACTGG 3 cut(s) 278, 1049, 1284
BssAI RCCGGY 1 cut(s) 187
BssECI CCNNGG 8 cut(s) 171, 306, 375, 731, 1024, 1219, 1220, 1320
BssMI GATC 6 cut(s) 167, 340, 852, 892, 933, 1101
BssT1I CCWWGG 4 cut(s) 375, 731, 1024, 1320
Bst2UI CCWGG 1 cut(s) 1221
Bst4CI ACNGT 2 cut(s) 400, 1238
Bst6I CTCTTC 1 cut(s) 74
BstAPI GCANNNNNTGC 2 cut(s) 749, 1331
BstBAI YACGTR 1 cut(s) 142
BstC8I GCNNGC 8 cut(s) 189, 287, 313, 574, 697, 780, 814, 927
BstDSI CCRYGG 4 cut(s) 306, 731, 1024, 1320
BstF5I GGATG 8 cut(s) 46, 229, 247, 282, 643, 873, 1182, 1420
BstH2I RGCGCY 2 cut(s) 32, 200
BstHHI GCGC 2 cut(s) 31, 199
BstKTI GATC 6 cut(s) 170, 343, 855, 895, 936, 1104
BstMAI GTCTC 3 cut(s) 560, 1043, 1371
BstMBI GATC 6 cut(s) 167, 340, 852, 892, 933, 1101
BstMWI GCNNNNNNNGC 7 cut(s) 184, 267, 291, 749, 867, 963, 1331
BstNI CCWGG 1 cut(s) 1221
BstNSI RCATGY 2 cut(s) 820, 947
BstSCI CCNGG 3 cut(s) 170, 219, 1219
BstSLI GKGCMC 4 cut(s) 373, 390, 745, 784
BstV2I GAAGAC 1 cut(s) 971
BstX2I RGATCY 3 cut(s) 167, 340, 892
BstXI CCANNNNNNTGG 1 cut(s) 654
BstYI RGATCY 3 cut(s) 167, 340, 892
Bsu36I CCTNAGG 1 cut(s) 1296
BsuRI GGCC 8 cut(s) 184, 219, 270, 285, 760, 925, 1084, 1307
BtgI CCRYGG 4 cut(s) 306, 731, 1024, 1320
BtsCI GGATG 8 cut(s) 46, 229, 247, 282, 643, 873, 1182, 1420
BtsI GCAGTG 2 cut(s) 747, 807
BtsIMutI CAGTG 4 cut(s) 271, 747, 807, 1291
Cac8I GCNNGC 8 cut(s) 189, 287, 313, 574, 697, 780, 814, 927
CaiI CAGNNNCTG 2 cut(s) 488, 1331
CciI TCATGA 1 cut(s) 1369
CfoI GCGC 2 cut(s) 31, 199
Cfr10I RCCGGY 1 cut(s) 187
Cfr13I GGNCC 7 cut(s) 99, 218, 268, 283, 380, 758, 923
CseI GACGC 2 cut(s) 110, 474
Csp6I GTAC 1 cut(s) 328
CviAII CATG 9 cut(s) 157, 692, 732, 817, 944, 1025, 1321, 1370, 1411
CviQI GTAC 1 cut(s) 328
DpnI GATC 6 cut(s) 169, 342, 854, 894, 935, 1103
DpnII GATC 6 cut(s) 167, 340, 852, 892, 933, 1101
DraIII CACNNNGTG 1 cut(s) 142
Eam1104I CTCTTC 1 cut(s) 74
EarI CTCTTC 1 cut(s) 74
EciI GGCGGA 2 cut(s) 161, 206
Eco130I CCWWGG 4 cut(s) 375, 731, 1024, 1320
Eco147I AGGCCT 1 cut(s) 1084
Eco24I GRGCYC 1 cut(s) 301
Eco31I GGTCTC 1 cut(s) 1043
Eco47I GGWCC 2 cut(s) 99, 380
Eco57I CTGAAG 4 cut(s) 53, 488, 770, 946
Eco72I CACGTG 1 cut(s) 142
Eco81I CCTNAGG 1 cut(s) 1296
Eco88I CYCGRG 1 cut(s) 799
EcoO109I RGGNCCY 4 cut(s) 99, 380, 758, 923
EcoRII CCWGG 1 cut(s) 1219
EcoT14I CCWWGG 4 cut(s) 375, 731, 1024, 1320
EcoT22I ATGCAT 2 cut(s) 645, 839
EcoT38I GRGCYC 1 cut(s) 301
ErhI CCWWGG 4 cut(s) 375, 731, 1024, 1320
FaeI CATG 9 cut(s) 160, 695, 735, 820, 947, 1028, 1324, 1373, 1414
FalI AAGNNNNNCTT 2 cut(s) 1252, 1284
FaqI GGGAC 5 cut(s) 85, 241, 393, 804, 1202
FatI CATG 9 cut(s) 156, 691, 731, 816, 943, 1024, 1320, 1369, 1410
FauI CCCGC 2 cut(s) 310, 1019
FblI GTMKAC 2 cut(s) 1041, 1233
FokI GGATG 7 cut(s) 53, 236, 254, 289, 630, 860, 1189
FriOI GRGCYC 1 cut(s) 301
FspBI CTAG 3 cut(s) 813, 912, 1173
GlaI GCGC 2 cut(s) 30, 198
GsuI CTGGAG 1 cut(s) 739
HaeII RGCGCY 2 cut(s) 32, 200
HaeIII GGCC 8 cut(s) 184, 219, 270, 285, 760, 925, 1084, 1307
HapII CCGG 4 cut(s) 86, 171, 188, 221
HgaI GACGC 2 cut(s) 110, 474
HhaI GCGC 2 cut(s) 31, 199
Hin1II CATG 9 cut(s) 160, 695, 735, 820, 947, 1028, 1324, 1373, 1414
Hin6I GCGC 2 cut(s) 29, 197
HinP1I GCGC 2 cut(s) 29, 197
HindIII AAGCTT 4 cut(s) 500, 710, 881, 1185
HinfI GANTC 6 cut(s) 82, 245, 404, 514, 614, 998
HpaII CCGG 4 cut(s) 86, 171, 188, 221
HphI GGTGA 3 cut(s) 58, 854, 1043
Hpy166II GTNNAC 7 cut(s) 371, 388, 743, 782, 822, 1042, 1234
Hpy188I TCNGA 5 cut(s) 340, 345, 507, 559, 1020
Hpy188III TCNNGA 5 cut(s) 583, 647, 718, 831, 1370
Hpy8I GTNNAC 7 cut(s) 371, 388, 743, 782, 822, 1042, 1234
Hpy99I CGWCG 3 cut(s) 67, 126, 325
HpyAV CCTTC 6 cut(s) 28, 205, 209, 274, 418, 914
HpyCH4III ACNGT 2 cut(s) 400, 1238
HpyCH4IV ACGT 3 cut(s) 141, 390, 1380
HpyF10VI GCNNNNNNNGC 7 cut(s) 184, 267, 291, 749, 867, 963, 1331
HpySE526I ACGT 3 cut(s) 141, 390, 1380
Hsp92II CATG 9 cut(s) 160, 695, 735, 820, 947, 1028, 1324, 1373, 1414
HspAI GCGC 2 cut(s) 29, 197
KflI GGGWCCC 1 cut(s) 99
KroI GCCGGC 1 cut(s) 187
KroNI GCCGGC 1 cut(s) 189
Kzo9I GATC 6 cut(s) 167, 340, 852, 892, 933, 1101
LmnI GCTCC 3 cut(s) 148, 304, 320
LweI GCATC 5 cut(s) 630, 652, 824, 1024, 1363
MaeI CTAG 3 cut(s) 813, 912, 1173
MaeII ACGT 3 cut(s) 141, 390, 1380
MaeIII GTNAC 1 cut(s) 1126
MalI GATC 6 cut(s) 169, 342, 854, 894, 935, 1103
MboI GATC 6 cut(s) 167, 340, 852, 892, 933, 1101
MboII GAAGA 6 cut(s) 91, 598, 862, 971, 1007, 1193
MfeI CAATTG 1 cut(s) 1194
MflI RGATCY 3 cut(s) 167, 340, 892
MhlI GDGCHC 6 cut(s) 301, 317, 373, 390, 745, 784
MluCI AATT 4 cut(s) 595, 1060, 1095, 1194
MlyI GAGTC 1 cut(s) 91
MmeI TCCRAC 1 cut(s) 318
Mph1103I ATGCAT 2 cut(s) 645, 839
MreI CGCCGGCG 1 cut(s) 187
MroNI GCCGGC 1 cut(s) 187
MseI TTAA 3 cut(s) 426, 543, 899
MslI CAYNNNNRTG 1 cut(s) 1029
MspA1I CMGCKG 3 cut(s) 289, 572, 1331
MspI CCGG 4 cut(s) 86, 171, 188, 221
MspR9I CCNGG 3 cut(s) 172, 221, 1221
MunI CAATTG 1 cut(s) 1194
Mva1269I GAATGC 2 cut(s) 1014, 1208
MvaI CCWGG 1 cut(s) 1221
MwoI GCNNNNNNNGC 7 cut(s) 184, 267, 291, 749, 867, 963, 1331
NaeI GCCGGC 1 cut(s) 189
NciI CCSGG 2 cut(s) 172, 221
NcoI CCATGG 3 cut(s) 731, 1024, 1320
NdeII GATC 6 cut(s) 167, 340, 852, 892, 933, 1101
NgoMIV GCCGGC 1 cut(s) 187
NheI GCTAGC 1 cut(s) 812
NlaIII CATG 9 cut(s) 160, 695, 735, 820, 947, 1028, 1324, 1373, 1414
NlaIV GGNNCC 6 cut(s) 100, 101, 137, 269, 300, 381
NsiI ATGCAT 2 cut(s) 645, 839
NspI RCATGY 2 cut(s) 820, 947
PagI TCATGA 1 cut(s) 1369
PasI CCCWGGG 1 cut(s) 1220
PceI AGGCCT 1 cut(s) 1084
PctI GAATGC 2 cut(s) 1014, 1208
PdiI GCCGGC 1 cut(s) 189
PfeI GAWTC 5 cut(s) 245, 404, 514, 614, 998
PflMI CCANNNNNTGG 1 cut(s) 737
PleI GAGTC 1 cut(s) 90
PmaCI CACGTG 1 cut(s) 142
PmlI CACGTG 1 cut(s) 142
PpsI GAGTC 1 cut(s) 90
Ppu21I YACGTR 1 cut(s) 142
PpuMI RGGWCCY 2 cut(s) 99, 380
Psp5II RGGWCCY 2 cut(s) 99, 380
Psp6I CCWGG 1 cut(s) 1219
PspCI CACGTG 1 cut(s) 142
PspGI CCWGG 1 cut(s) 1219
PspN4I GGNNCC 6 cut(s) 100, 101, 137, 269, 300, 381
PspPI GGNCC 7 cut(s) 99, 218, 268, 283, 380, 758, 923
PspPPI RGGWCCY 2 cut(s) 99, 380
PstNI CAGNNNCTG 2 cut(s) 488, 1331
PsuI RGATCY 3 cut(s) 167, 340, 892
PvuII CAGCTG 3 cut(s) 289, 572, 1331
RsaI GTAC 1 cut(s) 329
RsaNI GTAC 1 cut(s) 328
RseI CAYNNNNRTG 1 cut(s) 1029
SaqAI TTAA 3 cut(s) 426, 543, 899
Sau3AI GATC 6 cut(s) 167, 340, 852, 892, 933, 1101
Sau96I GGNCC 7 cut(s) 99, 218, 268, 283, 380, 758, 923
SchI GAGTC 1 cut(s) 91
ScrFI CCNGG 3 cut(s) 172, 221, 1221
SduI GDGCHC 6 cut(s) 301, 317, 373, 390, 745, 784
SfaNI GCATC 5 cut(s) 630, 652, 824, 1024, 1363
SgrAI CRCCGGYG 1 cut(s) 187
SinI GGWCC 2 cut(s) 99, 380
SmiMI CAYNNNNRTG 1 cut(s) 1029
SmlI CTYRAG 2 cut(s) 829, 878
SmoI CTYRAG 2 cut(s) 829, 878
Sse9I AATT 4 cut(s) 595, 1060, 1095, 1194
SseBI AGGCCT 1 cut(s) 1084
SsiI CCGC 9 cut(s) 146, 185, 191, 303, 592, 608, 775, 929, 1012
SspI AATATT 1 cut(s) 1390
SspMI CTAG 3 cut(s) 813, 912, 1173
StuI AGGCCT 1 cut(s) 1084
StyD4I CCNGG 3 cut(s) 170, 219, 1219
StyI CCWWGG 4 cut(s) 375, 731, 1024, 1320
TaaI ACNGT 2 cut(s) 400, 1238
TaiI ACGT 3 cut(s) 144, 393, 1383
TaqI TCGA 6 cut(s) 65, 71, 77, 402, 512, 1359
TasI AATT 4 cut(s) 595, 1060, 1095, 1194
TauI GCSGC 3 cut(s) 187, 611, 778
TfiI GAWTC 5 cut(s) 245, 404, 514, 614, 998
Tru1I TTAA 3 cut(s) 426, 543, 899
Tru9I TTAA 3 cut(s) 426, 543, 899
TscAI CASTG 4 cut(s) 278, 754, 814, 1291
TspDTI ATGAA 4 cut(s) 293, 680, 862, 1053
TspGWI ACGGA 1 cut(s) 245
TspRI CASTG 4 cut(s) 278, 754, 814, 1291
Van91I CCANNNNNTGG 1 cut(s) 737
VneI GTGCAC 4 cut(s) 369, 386, 741, 780
VpaK11BI GGWCC 2 cut(s) 99, 380
XceI RCATGY 2 cut(s) 820, 947
XmiI GTMKAC 2 cut(s) 1041, 1233
XspI CTAG 3 cut(s) 813, 912, 1173
Zsp2I ATGCAT 2 cut(s) 645, 839
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.